ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf78h17 |
|---|---|
| Clone Library Name | barley_pub |
>Q96524:CRY2_ARATH Cryptochrome-2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 612 Score = 688 bits (1775), Expect = 0.0 Identities = 323/539 (59%), Positives = 406/539 (75%), Gaps = 1/539 (0%) Frame = +2 Query: 542 MPGSERTVVWFRKDLRIDDNPXXXXXXRDGAVLPVFIWCPAEEGRFYPGRCSRWWLKESL 721 M ++T+VWFR+DLRI+DNP +G+V PVFIWCP EEG+FYPGR SRWW+K+SL Sbjct: 1 MKMDKKTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSL 60 Query: 722 AHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELL 901 AHL++SL+ALG L LI+ T+ A+L C+ AT+VV+NHLYDP+SLVRD +K +L+ Sbjct: 61 AHLSQSLKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLV 120 Query: 902 GLGISMQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGI 1081 GIS+QS+NGDLLYEPWEIY E G FT+FN YW+KC+++ IE PWRL+P++ Sbjct: 121 ERGISVQSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIESVMLPPPWRLMPITAA 180 Query: 1082 -ENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMKV 1258 E + SI+ LGLE+ E+ SNALL+RAWSPGW NA+K L +F+ L+DY+K+ KV Sbjct: 181 AEAIWACSIEELGLENEA-EKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKV 239 Query: 1259 AGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRY 1438 G +TSLLSPYLH+GE+SVR ++Q RM+QI + NSE ES +LFLR IGLREYSRY Sbjct: 240 VGNSTSLLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRY 299 Query: 1439 LCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIR 1618 +CFNFPFTHE+SLL +L+ +PW AD D+FK+WRQG TGYPLVDAGMRELWATGW HNRIR Sbjct: 300 ICFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIR 359 Query: 1619 VIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQ 1798 VIVSSFAVKFLL+PW WGMKYFWD LLDAD+E DILGWQYISG +PDGHEL RLDNP +Q Sbjct: 360 VIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQ 419 Query: 1799 GQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPIVELHMARE 1978 G KYDP+GEY+R W+PELAR+P EWIHHPWDAP ++L+ +GVELG NY PIV++ ARE Sbjct: 420 GAKYDPEGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARE 479 Query: 1979 CLDDAISTMWQLDTAEKLAELDGEVVEDNLSHIKSFDLPKVVLKELSPSAPHCDQKVPT 2155 L AIS + + E+V D+ + + + + L PS DQ+VP+ Sbjct: 480 LLAKAISRTREAQI--MIGAAPDEIVADSFEALGANTIKE---PGLCPSVSSNDQQVPS 533
>P40115:PHR1_SINAL Deoxyribodipyrimidine photo-lyase - Sinapis alba (White mustard)| (Brassica hirta) Length = 501 Score = 644 bits (1660), Expect = 0.0 Identities = 295/486 (60%), Positives = 372/486 (76%) Frame = +2 Query: 542 MPGSERTVVWFRKDLRIDDNPXXXXXXRDGAVLPVFIWCPAEEGRFYPGRCSRWWLKESL 721 M +++T+VWFR+DLRI+DNP +G+V PVFIWCP EEG+FYPGR SRWW+K+SL Sbjct: 1 MSTNKKTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSL 60 Query: 722 AHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELL 901 AHL +SL+ALG L LI+ +T+ A+L CV + AT+VV+NHLYDP+SLVRD +K +L+ Sbjct: 61 AHLRQSLKALGSELTLIKTHSTVSAILDCVRATGATKVVFNHLYDPVSLVRDHTVKEKLV 120 Query: 902 GLGISMQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGI 1081 GIS+QS+NGDL P + + +KC+++ +E PWRL+P+S Sbjct: 121 ERGISVQSYNGDLCMSPGRYTVKRANLLLVLILTGKKCLDMSVESVVLPPPWRLMPLSAA 180 Query: 1082 ENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMKVA 1261 E + S++ LGLE+ E+ SNALL+RAWSPGW NA+K L +F+ L+DY+K+ KV Sbjct: 181 ETVWACSVEELGLENEA-EKPSNALLTRAWSPGWSNADKILNEFIEKQLIDYAKNSKKVV 239 Query: 1262 GTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRYL 1441 G +TSLLSPYLH+GE+SVR+++Q RM+QI + N E ES +LFLR IGLR+YSR + Sbjct: 240 GNSTSLLSPYLHFGEISVRRVFQCARMKQIIWARDKNGEGEESADLFLRGIGLRDYSRII 299 Query: 1442 CFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRV 1621 CFNFPFTHE+SLL +L+ +PW AD D+FK+WRQG TGYPLVDAGMRELWATGW HNRIRV Sbjct: 300 CFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRV 359 Query: 1622 IVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQG 1801 IVSSFAVKFLL+PW WGMKYFWD LLDAD+E DI+GWQYISG LPDGHEL RLDNP +QG Sbjct: 360 IVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQG 419 Query: 1802 QKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPIVELHMAREC 1981 KYDP+GEY+R W+PELAR+P EWIHHPWDAP ++L+ +GVELG NY PIV + ARE Sbjct: 420 AKYDPEGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVVIDTAREL 479 Query: 1982 LDDAIS 1999 L AIS Sbjct: 480 LTKAIS 485
>Q43125:CRY1_ARATH Cryptochrome-1 - Arabidopsis thaliana (Mouse-ear cress)| Length = 681 Score = 612 bits (1579), Expect = e-174 Identities = 293/558 (52%), Positives = 388/558 (69%), Gaps = 9/558 (1%) Frame = +2 Query: 560 TVVWFRKDLRIDDNPXXXXXXRDGAVLPVFIWCPAEEGRFYPGRCSRWWLKESLAHLAKS 739 ++VWFR+DLR++DNP R G V+ +F+W P EEG ++PGR SRWWLK SLA L S Sbjct: 14 SIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQLDSS 73 Query: 740 LEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGISM 919 L +LG L+ R+ ++ +LL V S A+++ +NHLYDP+SLVRD + K+ L GI++ Sbjct: 74 LRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAV 133 Query: 920 QSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGIENLCTS 1099 +SFN DLLYEPWE+ DE G F+ F +WE+C+ +P + L P + + +SG + C + Sbjct: 134 RSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKI-ISGDVSKCVA 192 Query: 1100 SIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMKVAGTTTSL 1279 D L E E+ SNALL+RAWSPGW N +K L F+ LL+YSK+ K TTS Sbjct: 193 --DPLVFEDDS-EKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSF 249 Query: 1280 LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRYLCFNFPF 1459 LSP+LH+GEVSVRK++ LVR++Q+ NEGN ESVNLFL+SIGLREYSRY+ FN P+ Sbjct: 250 LSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPY 309 Query: 1460 THERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFA 1639 +HER LLG+LK +PW DE+ FK+WRQG TGYPLVDAGMRELWATGW H+RIRV+VSSF Sbjct: 310 SHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFF 369 Query: 1640 VKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPD 1819 VK L +PW WGMKYFWD LLDAD+ESD LGWQYI+G LPD E R+DNP+ +G K+DP+ Sbjct: 370 VKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPN 429 Query: 1820 GEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPIVELHMARECLDDAIS 1999 GEYVR W+PEL+R+P +WIHHPW+AP S+L+ AG+ELG NYP+PIV L A+ L +A+S Sbjct: 430 GEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALS 489 Query: 2000 TMWQLDTAEKLAELDG---------EVVEDNLSHIKSFDLPKVVLKELSPSAPHCDQKVP 2152 MWQL+ A + A +G EV E + + + + L+P+ + DQ VP Sbjct: 490 QMWQLEAASRAAIENGSEEGLGDSAEVEEAPIEFPRDITMEETEPTRLNPNRRYEDQMVP 549 Query: 2153 TDDGRNLELQPKELTGLN 2206 + + + E + LN Sbjct: 550 SITSSLIRPEEDEESSLN 567
>Q55081:PHR_SYNY3 Deoxyribodipyrimidine photo-lyase - Synechocystis sp. (strain PCC| 6803) Length = 488 Score = 203 bits (516), Expect = 4e-51 Identities = 141/478 (29%), Positives = 237/478 (49%), Gaps = 12/478 (2%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGAVLPVFIWC------PAEEGRFYPGRCSRWWLKESLA 724 ++W R+DLR++D+ + A + V ++C AE+ P R + +L L Sbjct: 20 LLWHRRDLRLNDHLALAKARQKTAKI-VGVFCLDNKILQAED--MAPARVA--YLLGCLQ 74 Query: 725 HLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLG 904 L + LG L++ +A + L + +++ A V + +P + RD + L Sbjct: 75 SLQDHYQRLGSELLVFQADP-VQLLPKLANTLGAHGVTWTLDTEPYAQKRDLAVAQALRE 133 Query: 905 LGISMQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGIE 1084 G+++ + L++ P E+ + G +T + +W+ +LP + SP P L ++ E Sbjct: 134 RGLAIATEWDQLMHHPGEVLTQAGSPYTVYTPFWKNWSQLP-KTSPVPTPKDLQGLTPAE 192 Query: 1085 NLCTSSIDNLGLESSKDEESSNALLSRAW------SPGWRNAEKTLEDFVCHGLLDYSKD 1246 + ++ L + D L W +PG AE+ L+ FV HGL +Y ++ Sbjct: 193 KEKLAPLEPLAIPQLAD-------LGFIWDQPLPLTPGEEAAEQRLDWFVAHGLEEYQQN 245 Query: 1247 GMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLRE 1426 A TS LS L +G +S R ++Q + +E EA S+ + + + RE Sbjct: 246 RNFPALDGTSQLSAALKFGVISPRTLWQTTLEAWEQSRSE---EARASIETWQQELAWRE 302 Query: 1427 YSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTH 1606 + ++ ++FP + + +PW ++D F++W +G TGYP++DA M +L TGW H Sbjct: 303 FYQHCLYSFPALAQGPYRSPFQEFPWEENQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMH 362 Query: 1607 NRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDN 1786 NR R+IV+SF +K L++ W WG YF L D D+ ++ GWQ+ + D L R+ N Sbjct: 363 NRCRMIVASFLIKDLILNWQWGELYFMQTLYDGDLAANNGGWQWSASSGMDPKPL-RIFN 421 Query: 1787 PEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPIVE 1960 P Q QK+DP+GEY+RTW+P+LAR D + L G NYP PIV+ Sbjct: 422 PHTQAQKFDPEGEYIRTWLPQLARF------DTGDLLTGKL-TPGSRRSVNYPEPIVD 472
>P77967:CRYD_SYNY3 Cryptochrome DASH - Synechocystis sp. (strain PCC 6803)| Length = 489 Score = 197 bits (501), Expect = 2e-49 Identities = 158/490 (32%), Positives = 241/490 (49%), Gaps = 18/490 (3%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFYPG--RCSRW---WLKESLA 724 +VWFR DLR+ D+ + G A+ V+ + P + + + G + W +L++S+ Sbjct: 9 LVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQ 68 Query: 725 HLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLG 904 +LA+SL+ +G L L+ + Q I A + Y+ L + + +L Sbjct: 69 NLAESLQKVGNKL-LVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTI 127 Query: 905 LGISMQSFNGDLLYEP----WEIYDENGLAFTTFNMYWEKCMELPIEISPSL-APWRLVP 1069 LGI + + G L P + I D L FT F EK I I P AP +L+P Sbjct: 128 LGIEAKGYWGSTLCHPEDLPFSIQDLPDL-FTKFRKDIEK---KKISIRPCFFAPSQLLP 183 Query: 1070 VSGIENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHG--LLDY-- 1237 I+ T+ + + D S A+ G L+D+ HG L DY Sbjct: 184 SPNIKLELTAPPPEFFPQINFDHRSV-----LAFQGGETAGLARLQDYFWHGDRLKDYKE 238 Query: 1238 SKDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLV-RMQQIKCGNEGNSEAGESVNLFLRSI 1414 +++GM V +S SP+L G +S R IYQ V R +Q + N+ S + + + Sbjct: 239 TRNGM-VGADYSSKFSPWLALGCLSPRFIYQEVKRYEQERVSND-------STHWLIFEL 290 Query: 1415 GLREYSRYLCFNF--PFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELW 1588 R++ R++ + + LL K++PW+ D+ RF+ WR G TGYPLVDA MREL Sbjct: 291 LWRDFFRFVAQKYGNKLFNRGGLLN--KNFPWQEDQVRFELWRSGQTGYPLVDANMRELN 348 Query: 1589 ATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHE 1768 TG+ NR R V+SF K L I W WG ++F L+D D+ S+ W Y +G D + Sbjct: 349 LTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIGNDARD 408 Query: 1769 LGRLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPM 1948 + P+ Q Q+YDP G Y+R W+PEL +PG+ IH PW ++ + GV+LG +YP Sbjct: 409 FRYFNIPK-QSQQYDPQGTYLRHWLPELKNLPGDKIHQPWLLSATEQKQWGVQLGVDYPR 467 Query: 1949 PIVELHMARE 1978 P V H + E Sbjct: 468 PCVNFHQSVE 477
>Q9KNA8:PHR_VIBCH Deoxyribodipyrimidine photo-lyase - Vibrio cholerae| Length = 469 Score = 189 bits (479), Expect = 7e-47 Identities = 146/483 (30%), Positives = 219/483 (45%), Gaps = 11/483 (2%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFYPGRCSRWWLKESLAHLAKS 739 +VWFR+DLR DN G V ++I P + + + + LA L + Sbjct: 3 LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62 Query: 740 LEALGCPLVLIRA---QTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLG 910 L AL PL + Q A+ Q ++ AT+V+ N Y+ RD + L G Sbjct: 63 LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQG 122 Query: 911 ISMQSFNGDLLYEPWEIYDENG---LAFTTFNMYWEKCMELP-IEISPSLAPWRLVPVSG 1078 I +F+ + P + + G FT F W + P I + +A W VP S Sbjct: 123 IIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWN-VP-SA 180 Query: 1079 IENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMKV 1258 + L E + D + S W+ + L DF + DY + Sbjct: 181 LAELVWHP------EQAFDYPRID---STPWAADFETVRAQLRDFCRERVQDYHQARDFP 231 Query: 1259 AGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRY 1438 A TS LSPYL G +S R+ + R+ E E ++L + RE+ ++ Sbjct: 232 AREGTSSLSPYLAIGVLSARQC--VARLYH----ESSMGELSEGAQVWLSELIWREFYQH 285 Query: 1439 LCFNFP-FTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRI 1615 L P + R + W D ++F+ W +G TGYP+VDA MR+L TGW HNR+ Sbjct: 286 LVAIEPNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRL 345 Query: 1616 RVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEV 1795 R+IV+SF K L I W WG +YF L+D D ++ GWQ+ + DG R+ NP Sbjct: 346 RMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVS 405 Query: 1796 QGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAP--SSILEVAGVELGFNYPMPIVELHM 1969 QG+K+DP+G+++R W+PEL + +IH PW P +S+L YP +V+ Sbjct: 406 QGEKFDPNGDFIRRWVPELRSVSSAYIHQPWTYPAVNSVL----------YPARLVDHKQ 455 Query: 1970 ARE 1978 RE Sbjct: 456 ERE 458
>P25078:PHR_SALTY Deoxyribodipyrimidine photo-lyase - Salmonella typhimurium| Length = 473 Score = 182 bits (463), Expect = 5e-45 Identities = 146/503 (29%), Positives = 234/503 (46%), Gaps = 14/503 (2%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGA--VLPVFIWCPAEEGRFYPGRCSRWWLKESLAHLAK 736 +VWFR+DLR+ DN RD + VL ++I PA+ ++ L L Sbjct: 5 LVWFRRDLRLQDNLALAAACRDASARVLALYISTPAQWQAHDMAPRQAAFISAQLNALQT 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSI----RATRVVYNHLYDPISLVRDDKIKNELLG 904 +L G PL L +A ++ V ++ + + YN+ Y+ RD ++ L Sbjct: 65 ALAEKGIPL-LFHEVADFNASIETVKNVCRQHDVSHLFYNYQYEFNERQRDAAVEKTLPS 123 Query: 905 LGISMQSFNGDLLYEPWEIYDENG---LAFTTFNMYWEKCMELPIEISPSLAPWRLVPVS 1075 + + F+ ++ P + N FT F W K ++ I P P + VS Sbjct: 124 --VICEGFDDSVILAPGAVMTGNHEMYKVFTPFKNAWLKRLKEDI---PPCVPAPKIRVS 178 Query: 1076 GIENLCTSSID----NLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSK 1243 G + + + +++ NA++++ L F G +Y+ Sbjct: 179 GALSTPLTPVSLNYPQQAFDAALFPVEENAVIAQ------------LRQFCAQGADEYAL 226 Query: 1244 DGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLR 1423 A TS LS L G +S R+ + +Q + + G +++L + R Sbjct: 227 RRDFPAVDGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGPG------SVWLNELIWR 280 Query: 1424 EYSRYLCFNFP-FTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGW 1600 E+ R+L +P + + K W+ + F++W++G TGYP+VDA MR+L ATGW Sbjct: 281 EFYRHLMTWYPALCKHQPFIRWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGW 340 Query: 1601 THNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRL 1780 HNR+R+I +SF VK LLI W G +YF L+D D+ ++ GWQ+ + D R+ Sbjct: 341 MHNRLRMITASFLVKDLLIDWRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRI 400 Query: 1781 DNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPIVE 1960 NP QG+++D DGE++R W+P L +PG+ IH PW E AGV L +YP PIVE Sbjct: 401 FNPTTQGERFDRDGEFIRQWLPALRDIPGKAIHEPW----RWAEKAGVVL--DYPRPIVE 454 Query: 1961 LHMARECLDDAISTMWQLDTAEK 2029 AR I+T+ + A K Sbjct: 455 HKQAR------IATLSAYEAARK 471
>P12768:PHR_STRGR Deoxyribodipyrimidine photo-lyase - Streptomyces griseus| Length = 455 Score = 178 bits (452), Expect = 9e-44 Identities = 134/477 (28%), Positives = 212/477 (44%), Gaps = 6/477 (1%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFYPGRCSRWWLKESLAHLAKS 739 VV F DLR+ DNP RD V+P+F+ A + +L + LA L Sbjct: 5 VVLFTSDLRLHDNPVLRAALRDADEVVPLFVRDDAVHRAGFDAPNPLAFLADCLAALDAG 64 Query: 740 LEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGISM 919 L G L++ R + + + + A RV + R+ +I+ L G + Sbjct: 65 LRHRGGRLIVRRGEAATE-VRRVAEETGAARVHIAAGVSRYAARREQRIREALADSGREL 123 Query: 920 QSFNGDLL-YEPWEIYDENGLA-FTTFNMYWEKCMELPIEISPSLAPWRLVPVSGIENL- 1090 + + P + G F F Y+ + W V G + Sbjct: 124 HVHDAVVTALAPGRVVPTGGKDHFAVFTPYFRR--------------WEAEGVRGTQTAP 169 Query: 1091 -CTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMKVAGT 1267 D + + D + L G K + ++ + DY +AG Sbjct: 170 RTVRVPDGVASDPLPDRDCVENLSPGLARGGEEAGRKLVTSWLNGPMADYEDGHDDLAGD 229 Query: 1268 TTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRYLCF 1447 TS LSP+LH+G VS ++ R E GE+ F+R + R++ + Sbjct: 230 ATSRLSPHLHFGTVSAAELVHRAR--------EKGGLGGEA---FVRQLAWRDFHHQVLA 278 Query: 1448 NFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIV 1627 + P +H WR+D D +W+ G+TGYPLVDA MR+L GW HNR R++ Sbjct: 279 DRPDASWSDY--RPRHDRWRSDADEMHAWKSGLTGYPLVDAAMRQLAHEGWMHNRARMLA 336 Query: 1628 SSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQGQK 1807 +SF K L + W G ++F D+L+D D+ ++ L WQ+++G D R+ NP +QG++ Sbjct: 337 ASFLTKTLYVDWREGARHFLDLLVDGDVANNQLNWQWVAGTGTDTRP-NRVLNPVIQGKR 395 Query: 1808 YDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVE-LGFNYPMPIVELHMAR 1975 +D G+YVR W+PELA + G IH PW ++ G++ G +YP P+V+L AR Sbjct: 396 FDARGDYVRGWVPELAEVEGSAIHEPW-------KLQGLDRAGLDYPDPVVDLAEAR 445
>Q7NMD1:CRYD_GLOVI Cryptochrome DASH - Gloeobacter violaceus| Length = 500 Score = 175 bits (443), Expect = 1e-42 Identities = 144/499 (28%), Positives = 230/499 (46%), Gaps = 12/499 (2%) Frame = +2 Query: 551 SERTVVWFRKDLRIDDN-PXXXXXXRDGAVLPVFIWCPAEEGRF-----YPGRCSRWWLK 712 ++ +VW+R DLR+ D+ P ++ V+ ++ + P + G+ G +L Sbjct: 3 TKTVLVWYRNDLRVHDHEPLTSALHKNARVVALYCFDPRQFGKAPFGFEKTGPFRARFLL 62 Query: 713 ESLAHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKN 892 ES+A L +SL LG L L+R + + V + V Y+ LV + ++ Sbjct: 63 ESVADLRRSLRQLGSDL-LVRRGHPEEVIPALVSELEIAAVHYHGEVTSEELVVERDLQA 121 Query: 893 ELLGLGISMQSFNGDLLYEPWEI---YDENGLAFTTFNMYWEKCMELPIEISPSL-APWR 1060 L L + ++SF G L P ++ + FT F K +E I+P L AP + Sbjct: 122 ALAPLNVPVRSFWGTTLVHPDDLPFAIEAIPELFTDFR----KQVERSAAINPPLPAPAK 177 Query: 1061 LVPVSGIENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYS 1240 L P+ ++ + +LGLES +E + + G E+ + Sbjct: 178 LPPLPAVDPGEIPQLADLGLESPVTDERAVLQFKGGETSGLARLEEYFWQKSLLKSYKQT 237 Query: 1241 KDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGL 1420 ++GM + +S S +L G +S R I++ V+ + K +S + + Sbjct: 238 RNGM-LGADYSSKFSAWLALGCLSARYIHEQVQTYETK------RIKNDSTYWLIFELLW 290 Query: 1421 REYSRYLCFNFP--FTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWAT 1594 R+Y R++ + L G PW+ D +RF+ WR G TG+PLVDA MREL AT Sbjct: 291 RDYFRFIAAKHGDRLFYTAGLRG--LDIPWKEDWERFELWRTGQTGFPLVDANMRELAAT 348 Query: 1595 GWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELG 1774 G+ NR R V+SF K L I W G ++F L+D D+ S+ W Y +G D Sbjct: 349 GFMSNRGRQNVASFLTKNLGIHWHMGAEWFESRLIDYDVASNWGNWNYTAGVGNDARGF- 407 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPI 1954 R N Q + YDPDG YV+ W+PELA +P +H PW + GV LG +YP P+ Sbjct: 408 RFFNILKQARDYDPDGAYVKHWLPELAGLPPARVHEPWKLLPVEQKRFGVRLGVDYPQPV 467 Query: 1955 VELHMARECLDDAISTMWQ 2011 V+L + + + W+ Sbjct: 468 VDLFQSAAANEAIYNAAWE 486
>P00914:PHR_ECOLI Deoxyribodipyrimidine photo-lyase - Escherichia coli| Length = 472 Score = 174 bits (442), Expect = 1e-42 Identities = 143/490 (29%), Positives = 223/490 (45%), Gaps = 19/490 (3%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGA--VLPVFIWCPAEEGRFYPGRCSRWWLKESLAHLAK 736 +VWFR+DLR+ DN R+ + VL ++I P + + L L Sbjct: 5 LVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQI 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSIRA----TRVVYNHLYDPISLVRDDKIKNELLG 904 +L G PL L R A ++ V + A T + YN+ Y+ RD +++ L Sbjct: 65 ALAEKGIPL-LFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERALRN 123 Query: 905 LGISMQSFNGDLLYEPWEIYDENG---LAFTTFNMYWEK--------CMELP-IEISPSL 1048 + + F+ ++ P + N FT F W K C+ P + S S+ Sbjct: 124 --VVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGSI 181 Query: 1049 APWRLVPVSGIENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGL 1228 P + + N S D + + A L F +G Sbjct: 182 EPSPSITL----NYPRQSFDTAHFPVEE-----------------KAAIAQLRQFCQNGA 220 Query: 1229 LDYSKDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLR 1408 +Y + A TS LS L G +S R+ + +Q + + G AG +++L Sbjct: 221 GEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGG---AG---SVWLN 274 Query: 1409 SIGLREYSRYLCFNFP-FTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMREL 1585 + RE+ R+L P R + W+++ ++W++G TGYP+VDA MR+L Sbjct: 275 ELIWREFYRHLITYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQL 334 Query: 1586 WATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGH 1765 +TGW HNR+R+I +SF VK LLI W G +YF L+D D+ ++ GWQ+ + D Sbjct: 335 NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAA 394 Query: 1766 ELGRLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYP 1945 R+ NP QG+K+D +GE++R W+PEL +PG+ +H PW + AGV L +YP Sbjct: 395 PYFRIFNPTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPW----KWAQKAGVTL--DYP 448 Query: 1946 MPIVELHMAR 1975 PIVE AR Sbjct: 449 QPIVEHKEAR 458
>Q9HQ46:PHR_HALSA Deoxyribodipyrimidine photo-lyase - Halobacterium salinarium| (Halobacterium halobium) Length = 481 Score = 173 bits (439), Expect = 3e-42 Identities = 140/495 (28%), Positives = 223/495 (45%), Gaps = 18/495 (3%) Frame = +2 Query: 569 WFRKDLRIDDN----------PXXXXXXRDGAVLPVFIWCPAEEGRFYPGRCSRWWLKES 718 W R+DLR DN G V VF + P R + ++ ++ Sbjct: 5 WHRRDLRTTDNRGLAAAAPGVTAVDGGHDQGPVAAVFCFDDEVLAHAAPPRVA--FMLDA 62 Query: 719 LAHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNEL 898 LA L + LG L+ +R L + + ATRVV+NH Y ++ RD +++ L Sbjct: 63 LAALRERYRDLGSDLI-VRHGDPAAVLPAVANDLDATRVVWNHDYSGLATDRDAGVRDAL 121 Query: 899 LGLGISMQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEI-SPSLAPWRLVPVS 1075 G++ F+ + + P EI G ++ + +W K + +P P L + Sbjct: 122 DAAGVAHAQFHDAVHHRPGEIRTNAGDPYSVYTYFWRKWQDREKNPPAPEPEPADLAADT 181 Query: 1076 GIENLCT-SSIDNLGL-ESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDG 1249 + + S+ LG E + +R+ +R + + + DY + Sbjct: 182 ALADTSPLPSVQELGFAEPEAAVPDAGTAAARSLLDAFRESG---DIYRYEDRRDYPHE- 237 Query: 1250 MKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLRE- 1426 TS LSP+L +G + +R +Y+ R + + + E+V F+ + RE Sbjct: 238 -----EPTSRLSPHLKFGTIGIRTVYEAARAAK---SDADTDDERENVAAFIGQLAWREF 289 Query: 1427 YSRYLCFNFPFTHERSLLGNLKHYP----WRADEDRFKSWRQGMTGYPLVDAGMRELWAT 1594 Y++ L FN E N K Y WR D ++W+ G TGYP+VDAGMR+L A Sbjct: 290 YAQVLYFNQNVVSE-----NFKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAE 344 Query: 1595 GWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELG 1774 + HNR+R+IV++F K LL+ W G +F + L D D +D GWQ+ + D Sbjct: 345 AYMHNRVRMIVAAFLTKDLLVDWRAGYDWFREKLADHDTANDNGGWQWAASTGTDAQPYF 404 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPI 1954 R+ NP QG++YDPD +Y+ ++PEL +P + IH + S E YP PI Sbjct: 405 RVFNPMTQGERYDPDADYITEFVPELRDVPADAIHSWHELSLSERRRHAPE----YPDPI 460 Query: 1955 VELHMARECLDDAIS 1999 V+ RE DAI+ Sbjct: 461 VDHSQRRE---DAIA 472
>Q04449:PHR_BACPF Deoxyribodipyrimidine photo-lyase - Bacillus pseudofirmus| Length = 339 Score = 172 bits (436), Expect = 7e-42 Identities = 99/266 (37%), Positives = 142/266 (53%), Gaps = 2/266 (0%) Frame = +2 Query: 1169 WSP-GWRNAEKTLEDFVCHGLLDYSKDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQ 1345 WS G +A K L+ F L Y + + T TS LSPY+ G VS R IY + Sbjct: 66 WSAIGEEHAIKRLQMFTKKRLSGYKANRDFPSITGTSRLSPYIKTGAVSSRSIYYHIL-- 123 Query: 1346 QIKCGNEGNSEAGE-SVNLFLRSIGLREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDR 1522 N+EA S FL+ + R++ R + F P +R ++ + W D+D Sbjct: 124 --------NAEADSYSAETFLKELAWRDFYRMVHFYEPDCKDREIMEGYRELNWSHDQDD 175 Query: 1523 FKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLD 1702 SW++G TG+P+VDAGMR+L GW HNR+R+I +SF K LLI W G +YF +L+D Sbjct: 176 LTSWKRGETGFPIVDAGMRQLLNEGWMHNRLRMITASFLTKDLLIDWRLGERYFERMLID 235 Query: 1703 ADIESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHH 1882 D S+I GWQ+ + D R+ NP Q +++D +G Y+RT+IPEL +P +IH Sbjct: 236 YDPSSNIGGWQWAASVGTDAVPYFRIFNPVTQSKRFDENGTYIRTYIPELNHVPDHYIHE 295 Query: 1883 PWDAPSSILEVAGVELGFNYPMPIVE 1960 PW L +YP+PIV+ Sbjct: 296 PWKMSEEEQVKYKCRLDEDYPLPIVD 321
>P05327:PHR_SYNP6 Deoxyribodipyrimidine photo-lyase - Synechococcus sp. (strain ATCC| 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) Length = 484 Score = 171 bits (432), Expect = 2e-41 Identities = 136/502 (27%), Positives = 221/502 (44%), Gaps = 10/502 (1%) Frame = +2 Query: 569 WFRKDLRIDDNPXXXXXXRDGAVLPVFIWCP----AEEGRFYPGRCSRWWLKESLAHLAK 736 W R+DLR+ DN A L + ++C + P R + +L+ L L + Sbjct: 8 WHRRDLRLSDNIGLAAARAQSAQL-IGLFCLDPQILQSADMAPARVA--YLQGCLQELQQ 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGIS 916 + G L+L++ + Q ++A V +N +P RD ++ L GI Sbjct: 65 RYQQAGSRLLLLQGDPQ-HLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIR 123 Query: 917 MQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGIENLCT 1096 LL+ P +I +G ++ + +W+ P + +P P LV +S + Sbjct: 124 AVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQP-KPTPVATPTELVDLSPEQLTAI 182 Query: 1097 SSIDNLGLESSKDEESSNALLSRAWS------PGWRNAEKTLEDFVCHGLLDYSKDGMKV 1258 + + L + K L W PG A L++F + DY Sbjct: 183 APLLLSELPTLKQ-------LGFDWDGGFPVEPGETAAIARLQEFCDRAIADYDPQRNFP 235 Query: 1259 AGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRY 1438 A TS LSP L +G + +R+ ++ ++ EA S+ ++ + + RE+ ++ Sbjct: 236 AEAGTSGLSPALKFGAIGIRQAWRAASAAHALSRSD---EARNSIRVWQQELAWREFYQH 292 Query: 1439 LCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIR 1618 ++FP + + +PW E F +W Q TGYP+VDA MR+L TGW HNR Sbjct: 293 ALYHFPSLADGPYRSLWQQFPWENREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCW 352 Query: 1619 VIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQ 1798 +IV+SF K L+I W G ++F L+D D+ ++ GWQ+ + D L R+ NP Q Sbjct: 353 MIVASFLTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKPL-RIFNPASQ 411 Query: 1799 GQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPIVELHMARE 1978 +K+D Y++ W+PEL + HP D S + G YP PIV H R+ Sbjct: 412 AKKFDATATYIKRWLPELRHV------HPKDLISGEITPIGRR---GYPAPIVN-HNLRQ 461 Query: 1979 CLDDAISTMWQLDTAEKLAELD 2044 A+ + AE AE D Sbjct: 462 KQFKALYNQLKAAIAEPEAEPD 483
>P27526:PHR_NEUCR Deoxyribodipyrimidine photo-lyase - Neurospora crassa| Length = 642 Score = 160 bits (406), Expect = 2e-38 Identities = 140/521 (26%), Positives = 231/521 (44%), Gaps = 36/521 (6%) Frame = +2 Query: 539 TMPGSERTVVWFRKDLRIDDNPXXXXXXRDGA-----VLPVFIWCPAEEGRFYPGRCSRW 703 ++P + V WF+ DLR+ DN + ++ +++ P + Sbjct: 130 SLPVRQAVVHWFKMDLRLHDNRSLWLASQKAKEAGVPLICLYVLSPEDLEAHLRAPIRVD 189 Query: 704 WLKESLAHLAKSLEALGCPLVLIRAQTTLDA---LLQCVHSIRATRVVYNHLYDPISLVR 874 ++ +L L LE LG PL + + + + + + S A+ + Y+ L R Sbjct: 190 FMLRTLEVLKTDLEDLGIPLWVETVEKRKEVPTKIKELMKSWGASHLFCAMEYEVDELRR 249 Query: 875 DDKIKNELLGLGISMQSFNGDLLYE-----PWEIYDENGLAFTTFNMY---WEKCMELP- 1027 + K+ +LL G + D++++ P + +G + ++ + W K +E Sbjct: 250 EAKLV-KLLAEGEKGEKMAADVVHDTCVVMPGALQSGSGGQYAVYSPWFRAWIKHIEENP 308 Query: 1028 --IEISPSLAPWRLVPVSGIENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKT 1201 +EI P ENL SI E + + A W G A K Sbjct: 309 ECLEIYEKPGPNPPGTKEKHENLFACSIPEAP-EGKRLRDDEKARYHSLWPAGEHEALKR 367 Query: 1202 LEDFVCHGLLDYSKDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVR----MQQIKCGNEG 1369 LE F + Y++ A TS LS + G +S R + R +++ GNEG Sbjct: 368 LEKFCDEAIGKYAERRNIPAMQGTSNLSVHFASGTLSARTAIRTARDRNNTKKLNGGNEG 427 Query: 1370 NSEAGESVNLFLRSIGLREYSR-------YLCFNFPFTHERSLLGNLKHYPWRADEDRFK 1528 + ++ + R++ + Y+C N PF S + W + D F Sbjct: 428 -------IQRWISEVAWRDFYKHVLVHWPYVCMNKPFKPTYS------NIEWSYNVDHFH 474 Query: 1529 SWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDAD 1708 +W QG TG+P++DA MR++ +TG+ HNR+R+IV+SF K LL+ W G +YF + L+D D Sbjct: 475 AWTQGRTGFPIIDAAMRQVLSTGYMHNRLRMIVASFLAKDLLVDWRMGERYFMEHLIDGD 534 Query: 1709 IESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMP------GE 1870 S+ GW + + D R+ NP +Q +K+DPDG+Y+R W+ EL +P G Sbjct: 535 FASNNGGWGFAASVGVDPQPYFRVFNPLLQSEKFDPDGDYIRKWVEELRDLPELKGGKGG 594 Query: 1871 WIHHPWDAPSSILEVAGVELGFNYPMPIVELHMARECLDDA 1993 IH P+ S ++ E G YP PIVE AR+ DA Sbjct: 595 EIHDPYGRGSEKVKKKLEEKG--YPRPIVEHSGARDRALDA 633
>P57386:PHR_BUCAI Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola subsp.| Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) Length = 483 Score = 155 bits (391), Expect = 1e-36 Identities = 131/489 (26%), Positives = 219/489 (44%), Gaps = 14/489 (2%) Frame = +2 Query: 554 ERTVVWFRKDLRIDDNPXXXXXXRDGA--VLPVFIWCPAEEGRFYPGRCSRWWLKESLAH 727 ++ ++WFR DLR+ DN ++ V+ +FI P + + ++ L Sbjct: 2 QKNLIWFRNDLRVYDNTALHQACQNDTDKVISLFISTPKQWHNQSVSKKKISFMYYHLIS 61 Query: 728 LAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRV---VYNHLYDPISLVRDDKIKNEL 898 L K L L L + L+++ + + +V YN+ Y RD +K +L Sbjct: 62 LQKELLKLNIILYYHESTDFLNSIEYLIFFCKKHKVNNLFYNYEYAINERYRDYLVKKKL 121 Query: 899 LGLGISMQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSG 1078 G ++ F+ +LL+ +I ++ + F + +K ++ P P S Sbjct: 122 SQKGFLVKGFHDNLLFSNRQIRNQKNETYKVFTFFKKKVIQNLHNNIPQCFPVPSKRKSD 181 Query: 1079 IENLCTS-SIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMK 1255 + TS S+ N+ L +K+ + G + A L++F + DY Sbjct: 182 RDIFLTSISLKNVNLNFNKN----------FFPVGEKEAINRLKNFCIYKFNDYFLKRDY 231 Query: 1256 VAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRS-----IGL 1420 TS+LSPYL G +S R +++ +K N +N+ L S I Sbjct: 232 PFLDATSMLSPYLSAGIISSRYCLKVL----LKTKNS------LPLNVLLTSPWFDQILW 281 Query: 1421 REYSRYLCFNFP-FTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATG 1597 RE+ +L FP + SL+ K W + F +W++G TG+P++DAGMR+L G Sbjct: 282 REFYYHLLIGFPKISRSESLVTWEKEIHWINNIKHFNAWKEGNTGFPIIDAGMRQLNELG 341 Query: 1598 WTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGR 1777 W HNR+R+I SSF VK LLI W G ++F L+D D+ + GWQ+ + D R Sbjct: 342 WMHNRLRMITSSFLVKNLLINWREGEEHFISNLIDGDLALNNGGWQWSASVGCDSVPYIR 401 Query: 1778 LDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIH--HPWDAPSSILEVAGVELGFNYPMP 1951 + NP Q + +D G +++ +IPEL +P IH H W + +YP P Sbjct: 402 IFNPLHQSKTFDESGNFIKKFIPELKNVPNHHIHQPHEWSKQKN--------FKIDYPNP 453 Query: 1952 IVELHMARE 1978 I+ +R+ Sbjct: 454 IINYSESRK 462
>Q89AJ9:PHR_BUCBP Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola subsp.| Baizongia pistaciae Length = 478 Score = 149 bits (376), Expect = 6e-35 Identities = 126/479 (26%), Positives = 218/479 (45%), Gaps = 7/479 (1%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGA--VLPVFIWCPAEEGRFYPGRCSRWWLKESLAHLAK 736 ++WFR DLR+ DN R+ A VL +FI P + R + + +++ L K Sbjct: 5 LMWFRNDLRLSDNSALHFSCRNNASTVLALFIATPKQWERHCLAPKKKMLIYKNIVALKK 64 Query: 737 SLEALGCPLVLIRAQTTLDA---LLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGL 907 + LG + L++ +++ + T + +N Y+ RD IK +L Sbjct: 65 KITELGIIFYYYESTDYLESTNYIIEFCKIHKVTSIFFNLEYEFYERQRDKIIKKKLKKN 124 Query: 908 GISMQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCM-ELPIEISPSLAPWRLVPVSGIE 1084 I + F+ +L P I + G + F+ + KC+ +L + I PS P + Sbjct: 125 NIIINCFHDSVLITPGSIKNSYGKMYKKFSYFKYKCIKQLQLNI-PSCFPKP-------Q 176 Query: 1085 NLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMKVAG 1264 N +L + + G + L+ F+ + Y+ D Sbjct: 177 NKNLHDHYSLDFTIPIFHTYLEKFDANIFPIGEDIVYEKLKFFIKYAFNKYNFDQEIFEL 236 Query: 1265 TTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRYLC 1444 +TS+LS +L G +S R+ L+ + ++ E + +N L RE+ ++L Sbjct: 237 NSTSMLSAHLSIGVISPRQCVTLLFKEYPDIIHK--LEECKWINELL----WREFYQHLL 290 Query: 1445 FNFP-FTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRV 1621 + +P +SL W + W+QG TGYP++DAGMR+L GW NR+R+ Sbjct: 291 YFYPNIGQNQSLYHWENRIKWDNNLYYLNLWKQGNTGYPIIDAGMRQLKQLGWISNRLRM 350 Query: 1622 IVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQG 1801 I +SF VK LLI W G +YF L+D D S+ WQ+I+ D R+ NP +Q Sbjct: 351 ITASFLVKNLLIDWRKGEEYFMSQLIDGDFASNNGNWQWIASVGTDSMPYFRIFNPMLQS 410 Query: 1802 QKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPIVELHMARE 1978 +K+D + +++R +IPEL+ + IH+P D + ++ YP PI+ + +++ Sbjct: 411 KKFDINAKFIRKYIPELSNVSTYNIHNPCDNNKT------NKIHSKYPQPIINYYHSKK 463
>Q3IPX9:CRYD_NATPD Cryptochrome DASH - Natronomonas pharaonis (strain DSM 2160 / ATCC| 35678) Length = 474 Score = 148 bits (374), Expect = 1e-34 Identities = 132/480 (27%), Positives = 207/480 (43%), Gaps = 10/480 (2%) Frame = +2 Query: 554 ERTVVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCP-----AEEGRFYPGRCSRWWLKE 715 + VVWFR DLR+ DNP V+PV+ + P +E G G + ++ Sbjct: 2 DTAVVWFRDDLRVTDNPTLADAVAAAETVIPVYTFDPDRYTESEYGPPKTGGHRAVFRRQ 61 Query: 716 SLAHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNE 895 ++A L SL G L L+R+ + + A V R + + Sbjct: 62 AVADLRASLRDRGGDL-LVRSGRPATVVPELAQRAGADAVYAQTKPATEERRRAADVASA 120 Query: 896 LLGLGISMQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEI-SPSLAPWRLVPV 1072 L GI+++ LY P ++ TF W K E + P AP + Sbjct: 121 LDDAGIALRQRWTHTLYHPDDLPTPPTDIDDTFTP-WRKETEAAATVRDPRSAPETVPTP 179 Query: 1073 SGIENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHG--LLDYSKD 1246 G+ ++++LG+ S+ A+L + G ++ +E ++ G L +Y Sbjct: 180 DGLTPGPVPTVESLGV--SEPPTDDRAVLE--FEGGESAGKRRVESYIWEGDHLREYKTT 235 Query: 1247 GMKVAGTT-TSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLR 1423 + G +S SP+L G +S R +++ V E A E + + R Sbjct: 236 RNGLLGADYSSKFSPWLAAGCLSPRWLHREVERY------EDERVANEDTYWLVFELAWR 289 Query: 1424 EYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWT 1603 ++ ++ + T + ++ W D F+ W G TG P VDA MREL TG+ Sbjct: 290 DFFQFQFEKYGATFFKPGGIRERNIDWDRDRALFERWADGETGVPFVDANMRELNRTGYM 349 Query: 1604 HNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLD 1783 NR R V+SF L I W WG YF L+D D+ S+ W Y +G D + R Sbjct: 350 SNRGRQNVASFLAGVLGIDWRWGAAYFEARLIDYDVASNWGNWAYQAGVGNDSRD--RYF 407 Query: 1784 NPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPIVEL 1963 + Q ++YD D EY+ TW+PELA +P H PW + GVELG +YP P+V++ Sbjct: 408 DVRSQAERYDSDAEYITTWLPELAALPATIAHQPWQLSEAEQREYGVELGVDYPEPVVDI 467
>Q4KML2:CRYD_DANRE Cryptochrome DASH - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 520 Score = 145 bits (367), Expect = 7e-34 Identities = 129/486 (26%), Positives = 214/486 (44%), Gaps = 14/486 (2%) Frame = +2 Query: 542 MPGSERTVVWFRKDLRIDDNPXXXXXXRDGA-VLPVFIWCPAE-EGRFY-----PGRCSR 700 M S + R DLR+ DN R+ ++P++ + P +G ++ G Sbjct: 1 MSASRTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRL 60 Query: 701 WWLKESLAHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVR-- 874 +L +S+ L L+ G L L+R D + + + + + V H + ++ Sbjct: 61 RFLLDSVKDLRALLKKHGSTL-LVRQGKPEDVVCELIKQLGSVSTVAFH--EEVASEEKS 117 Query: 875 -DDKIKNELLGLGISMQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLA 1051 ++K+K + +Q+F G LY ++ + + K +E + P L+ Sbjct: 118 VEEKLKEICCQNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPVLS 177 Query: 1052 PWRLV--PVSGIENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHG 1225 V P SG+E + D+LG D+ S + + D Sbjct: 178 TPEQVKSPPSGLEEGPIPTFDSLGQTEPLDDCRSAFPCRGGETEALARLKHYFWDTNAVA 237 Query: 1226 LLDYSKDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFL 1405 +++GM +T SP+L G +S R IY+ ++ +++ A +S + Sbjct: 238 TYKETRNGMIGVDFSTKF-SPWLALGCISPRYIYEQIKKYEVE------RTANQSTYWVI 290 Query: 1406 RSIGLREYSRYLCFNFPFTHERSLLGNL--KHYPWRADEDRFKSWRQGMTGYPLVDAGMR 1579 + R+Y +++ + + + L KH PW D F +W++G TG P VDA MR Sbjct: 291 FELLWRDYFKFVALKYG--NRIFYMNGLQDKHVPWNTDMKMFDAWKEGRTGVPFVDANMR 348 Query: 1580 ELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPD 1759 EL TG+ NR R V+SF K L + W G ++F +L+D D+ S+ W Y +G D Sbjct: 349 ELALTGFMSNRGRQNVASFLTKDLGLDWRLGAEWFEYLLVDHDVCSNYGNWLYSAGIGND 408 Query: 1760 GHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFN 1939 E R N QG YD +G+YVR W+PEL + G +H PW +S L A V L Sbjct: 409 PRE-NRKFNMIKQGLDYDNNGDYVRQWVPELRGIKGGDVHTPWTLSNSALSHAQVSLNQT 467 Query: 1940 YPMPIV 1957 YP PI+ Sbjct: 468 YPCPII 473
>P61497:PHR_THET8 Deoxyribodipyrimidine photo-lyase - Thermus thermophilus (strain HB8| / ATCC 27634 / DSM 579) Length = 420 Score = 145 bits (366), Expect = 9e-34 Identities = 118/429 (27%), Positives = 189/429 (44%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGAVLPVFIWCPAEEGRFYPGRCSRWWLKESLAHLAKSL 742 +VW R DLR+ D+P G V+ + + P + P R R W E++ L ++ Sbjct: 5 LVWHRGDLRLHDHPALLEALARGPVVGLVVLDP-NNLKTTPRR--RAWFLENVRALREAY 61 Query: 743 EALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGISMQ 922 A G L ++ + + + ++A V + P RD +++ L + + Sbjct: 62 RARGGALWVLEG-LPWEKVPEAARRLKAKAVYALTSHTPYGRYRDGRVRE---ALPVPLH 117 Query: 923 SFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGIENLCTSS 1102 LL P + + A+ + + L +P L P +P E Sbjct: 118 -----LLPAPHLLPPDLPRAYRVYTPF----SRLYRGAAPPLPPPEALPKGPEEGEIPRE 168 Query: 1103 IDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMKVAGTTTSLL 1282 L L PG A L F+ L Y+++ ++ G S L Sbjct: 169 DPGLPLPE----------------PGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSRL 212 Query: 1283 SPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRYLCFNFPFT 1462 SPY G +S R E GE ++ + R++S +L ++FP+ Sbjct: 213 SPYFALGVLSPRL-----------AAWEAERRGGEGARKWVAELLWRDFSYHLLYHFPWM 261 Query: 1463 HERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAV 1642 ER L + +PW+ DE F++W +G TG PLVDA MREL ATG+ NR R+ + FAV Sbjct: 262 AERPLDPRFQAFPWQEDEALFQAWYEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAV 321 Query: 1643 KFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDG 1822 K LL+PW + F +LLD D ++ GWQ+ G D R+ NP +QG+++DP+G Sbjct: 322 KHLLLPWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEG 381 Query: 1823 EYVRTWIPE 1849 +++ W PE Sbjct: 382 RWLKRWAPE 390
>Q7UJB1:CRYD_RHOBA Cryptochrome DASH - Rhodopirellula baltica| Length = 488 Score = 145 bits (366), Expect = 9e-34 Identities = 143/490 (29%), Positives = 213/490 (43%), Gaps = 23/490 (4%) Frame = +2 Query: 563 VVWFRKDLR-IDDNPXXXXXXRDGAVLPVFI----WCPAEEGRFYPGRCSRWWLKESLAH 727 +VWFR DLR ID P D I + E G G +L E+L Sbjct: 5 LVWFRNDLRTIDHEPFLRASTADRCFAVHCIDPRQFETTELGFQRTGPFRARFLIENLTD 64 Query: 728 LAKSLEALGCPLVLI--RAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELL 901 L L +LG L++ R +T L LL S+ V ++H + ++ Sbjct: 65 LRSRLRSLGGELIVRVGRPETVLQHLLP---SLAIDAVHFHHEPRTEEADTAESVQQLCD 121 Query: 902 GLGISMQSFNGDLLYEP----WEIYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVP 1069 GI+ GD L P +EI D L FT F EK E + + +P Sbjct: 122 QHGIATHVAYGDTLIHPDELPFEIADTPEL-FTDFRKEIEKQCEARSPLEEPIRIHGTLP 180 Query: 1070 VSGIENLCTSSIDNLGLESSK-DEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKD 1246 + ++++LGL + D+ N ++ G A++ +E+++ +++D Sbjct: 181 EE-VNAGDIPTLESLGLSTPPLDDRCLNQ-----FTGGQNAAQQRMEEYI------WNED 228 Query: 1247 GMKVAGTT---------TSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNL 1399 ++V T +S SP+L G +S R I VR E +S Sbjct: 229 RLRVYKETRNGMLHPNDSSKFSPWLAQGCLSPRMIADHVRRY------EEERVKNKSTYW 282 Query: 1400 FLRSIGLREYSRYLCFNFPFTHERSLLGNLK--HYPWRADEDRFKSWRQGMTGYPLVDAG 1573 + + R+Y R++ T R+ G L+ + W++D + F+ W+ G TGYPLVDA Sbjct: 283 MIFELLWRDYFRWISRKHGATLFRA--GGLRGVNVDWKSDRELFRRWQDGTTGYPLVDAN 340 Query: 1574 MRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCL 1753 MREL TG+ NR R V+SF K L I W WG ++F L+D D+ S+ W Y +G Sbjct: 341 MRELRTTGYMSNRGRQNVASFLTKNLGIDWRWGARWFESQLVDYDVASNYGNWNYAAGVG 400 Query: 1754 PDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELG 1933 D R N Q + YD GEY + W+PEL + IH PW + G LG Sbjct: 401 NDARGF-RFFNITKQSRDYDSQGEYAKHWLPELRDLDVTEIHEPWKMSPERQQEVGATLG 459 Query: 1934 FNYPMPIVEL 1963 YP PIV+L Sbjct: 460 KEYPHPIVDL 469
>P61496:PHR_THET2 Deoxyribodipyrimidine photo-lyase - Thermus thermophilus (strain HB27| / ATCC BAA-163 / DSM 7039) Length = 420 Score = 144 bits (362), Expect = 3e-33 Identities = 120/429 (27%), Positives = 190/429 (44%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGAVLPVFIWCPAEEGRFYPGRCSRWWLKESLAHLAKSL 742 +VW R DLR+ D+P G V+ + + P + P R R W E++ L ++ Sbjct: 5 LVWHRGDLRLHDHPALLEALARGPVVGLVVLDP-NNLKTTPRR--RAWFLENVRALREAY 61 Query: 743 EALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGISMQ 922 A G L ++ + + + ++A V Y P RD K++ L + + Sbjct: 62 RARGGALWVLEG-LPWEKVPEAARRLKAKAVYALTSYTPYGRYRDAKVQE---ALPVPLH 117 Query: 923 SFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGIENLCTSS 1102 LL P + + A+ + + + + + +P AP L P E Sbjct: 118 -----LLPAPHLLPPDLPRAYRVYTPFARRFLGVE---APLPAPEAL-PKGPEEGEIPRE 168 Query: 1103 IDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMKVAGTTTSLL 1282 L L PG A L F+ L Y+++ ++ G S L Sbjct: 169 DPGLPLPE----------------PGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSRL 212 Query: 1283 SPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRYLCFNFPFT 1462 SPY G +S R E GE ++ + R++S +L ++FP+ Sbjct: 213 SPYFALGVLSPRL-----------AAWEAERRGGEGARKWVAELLWRDFSYHLLYHFPWM 261 Query: 1463 HERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAV 1642 ER L + PW+ DE F++W +G TG PLVDA MREL ATG+ NR R+ + FAV Sbjct: 262 AERPLDPRFQALPWQEDEALFRAWYEGRTGVPLVDAAMRELHATGFLSNRARMNAAQFAV 321 Query: 1643 KFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDG 1822 K LL+PW + F +LLD D ++ GWQ+ G D R+ NP +QG+++DP+G Sbjct: 322 KHLLLPWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEG 381 Query: 1823 EYVRTWIPE 1849 +++ W PE Sbjct: 382 RWLKRWAPE 390
>Q8QG61:CRY1_CHICK Cryptochrome-1 - Gallus gallus (Chicken)| Length = 621 Score = 139 bits (350), Expect = 6e-32 Identities = 134/481 (27%), Positives = 208/481 (43%), Gaps = 16/481 (3%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFYPGRCSRW-WLKESLAHLAK 736 V WFRK LR+ DNP R V V+I P G G +RW +L + L L Sbjct: 6 VHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLDA 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGIS 916 +L L L +IR Q D + ++ + +P RD IK G+ Sbjct: 65 NLRKLNSRLFVIRGQPA-DVFPRLFKEWSIAKLSIEYDSEPFGKERDAAIKKLASEAGVE 123 Query: 917 MQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKC--MELPIE-ISPSLAPWRLVPVS 1075 + LY+ +I + NG L + F + +E+P+E I+P + PVS Sbjct: 124 VIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMEPLEMPVETITPEVMQKCTTPVS 183 Query: 1076 GI--ENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHG--LLDYSK 1243 E S++ LG ++ + L S W G A LE + + ++ + Sbjct: 184 DDHDEKYGVPSLEELGFDT-------DGLPSAVWPGGETEALTRLERHLERKAWVANFER 236 Query: 1244 DGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIG 1417 M S LSPYL +G +S R Y ++ + + NS S+ + Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCRLFY--FKLTDLYKKVKKNSSPPLSL---YGQLL 291 Query: 1418 LREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATG 1597 RE+ N P + PW + + W +G TG+P +DA M +L G Sbjct: 292 WREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEG 351 Query: 1598 WTHNRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELG 1774 W H+ R V+ F + L I W GMK F ++LLDAD + W ++S C + Sbjct: 352 WIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLS-CSSFFQQFF 410 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPI 1954 P G++ DP+G+Y+R ++P L P ++I+ PW+AP S+ + A +G NYP P+ Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYPKPM 470 Query: 1955 V 1957 V Sbjct: 471 V 471
>Q75WS4:CRYD_XENLA Cryptochrome DASH - Xenopus laevis (African clawed frog)| Length = 523 Score = 138 bits (348), Expect = 1e-31 Identities = 130/476 (27%), Positives = 212/476 (44%), Gaps = 15/476 (3%) Frame = +2 Query: 575 RKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEE-GRFY-------PGRCSRWWLKESLAH 727 R DLR+ DN R+ ++P++ + P G Y P R +L ES+ Sbjct: 13 RNDLRLHDNEVLHWAHRNADQIVPLYCFDPRHYVGTHYFNFPKTGPHRLK--FLLESVRD 70 Query: 728 LAKSLEALGCPLVLIRA--QTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELL 901 L +L+ G L+L R + ++ L++ + ++ A + + + + +K Sbjct: 71 LRITLKKKGSNLLLRRGKPEEVIEDLVKQLGNVSAVTLHEEATKEETDV--ESAVKQACT 128 Query: 902 GLGISMQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLA-PWRLVPV-S 1075 LGI Q+F G LY ++ + + + K +E ++ P+ P +L P+ S Sbjct: 129 RLGIKYQTFWGSTLYHREDLPFRHISSLPDVYTQFRKAVETQGKVRPTFQMPDKLKPLPS 188 Query: 1076 GIENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMK 1255 G+E S ++ + + + S S + E + +++G+ Sbjct: 189 GLEEGSVPSHEDFDQQDPLTDPRTAFPCSGGESQALQRLEHYFWETNLVASYKDTRNGLI 248 Query: 1256 VAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSR 1435 +T +P+L G VS R IY+ + E A +S + + R+Y R Sbjct: 249 GLDYSTKF-APWLALGCVSPRYIYEQIGKY------EKERTANQSTYWVIFELLWRDYFR 301 Query: 1436 YLCFNFPFTHERSLLGNL--KHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHN 1609 ++ + L L K PW+ D F +W++G TG P VDA MREL TG+ N Sbjct: 302 FVALKYG--RRIFFLRGLQDKDIPWKRDPKLFDAWKEGRTGVPFVDANMRELAMTGFMSN 359 Query: 1610 RIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNP 1789 R R V+SF K L I W G ++F +L+D D+ S+ W Y +G D E R N Sbjct: 360 RGRQNVASFLTKDLGIDWRMGAEWFEYLLVDYDVCSNYGNWLYSAGIGNDPRE-NRKFNM 418 Query: 1790 EVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPIV 1957 QG YD G+Y+R W+PEL ++ G H PW ++ L A + LG YP PIV Sbjct: 419 IKQGLDYDSGGDYIRLWVPELQQIKGGDAHTPWALSNASLAHANLSLGETYPYPIV 474
>Q5IZC5:CRY1_ERIRU Cryptochrome-1 - Erithacus rubecula (European robin)| Length = 620 Score = 138 bits (348), Expect = 1e-31 Identities = 134/481 (27%), Positives = 207/481 (43%), Gaps = 16/481 (3%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFYPGRCSRW-WLKESLAHLAK 736 V WFRK LR+ DNP R V V+I P G G +RW +L + L L Sbjct: 6 VHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLDA 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGIS 916 +L L L +IR Q D + ++ + +P RD IK G+ Sbjct: 65 NLRKLNSRLFVIRGQPA-DVFPRLFKEWNIAKLSIEYDSEPFGKERDAAIKKLASEAGVE 123 Query: 917 MQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKC--MELPIE-ISPSLAPWRLVPV- 1072 + LY+ +I + NG L + F + +E+P+E I+P + PV Sbjct: 124 VIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMEPLEMPVETITPEVMKKCTTPVF 183 Query: 1073 -SGIENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCH--GLLDYSK 1243 E S++ LG ++ + L S W G A LE + + ++ + Sbjct: 184 DDHDEKYGVPSLEELGFDT-------DGLPSAVWPGGETEALTRLERHLERKASVANFER 236 Query: 1244 DGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIG 1417 M S LSPYL +G +S R Y ++ + + NS S+ + Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCRLFY--FKLTDLYKKVKKNSSPPLSL---YGQLL 291 Query: 1418 LREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATG 1597 RE+ N P + PW + + W +G TG+P +DA M +L G Sbjct: 292 WREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEG 351 Query: 1598 WTHNRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELG 1774 W H+ R V+ F + L I W GMK F ++LLDAD + W ++S C + Sbjct: 352 WIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLS-CSSFFQQFF 410 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPI 1954 P G++ DP+G+Y+R ++P L P ++I+ PW+AP SI + A +G NYP P+ Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESIQKAAKCIIGVNYPKPM 470 Query: 1955 V 1957 V Sbjct: 471 V 471
>Q923I8:CRY2_RAT Cryptochrome-2 - Rattus norvegicus (Rat)| Length = 594 Score = 138 bits (347), Expect = 1e-31 Identities = 136/483 (28%), Positives = 209/483 (43%), Gaps = 17/483 (3%) Frame = +2 Query: 560 TVVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFYPGRCSRW-WLKESLAHLA 733 +V WFRK LR+ DNP R V V+I P G +RW +L +SL L Sbjct: 23 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLEDLD 81 Query: 734 KSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGI 913 SL L L ++R Q D + TR+ + + +P RD I G+ Sbjct: 82 TSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGV 140 Query: 914 SMQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGI 1081 + + N LY+ I + NG L + F + MELP + P V + Sbjct: 141 EVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISR-MELPKK------PVGAVSSQHM 193 Query: 1082 ENLCTSSI-----DNLGLESSKDEESSNALLSRA-WSPGWRNAEKTLEDFVCHG--LLDY 1237 EN C + I D G+ S ++ L A W G A L+ + + +Y Sbjct: 194 EN-CRAEIQENHDDTYGVPSLEELGFPTEGLGPAVWQGGETEALVRLDKHLERKAWVANY 252 Query: 1238 SKDGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRS 1411 + M S LSPYL +G +S R Y R+ + + NS ++LF + Sbjct: 253 ERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYRKVKRNSTP--PLSLFGQL 308 Query: 1412 IGLREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWA 1591 + RE+ N P PW + + W +G TG+P +DA M +L Sbjct: 309 LW-REFFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQ 367 Query: 1592 TGWTHNRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHE 1768 GW H+ R V+ F + L + W G++ F ++LLDAD + W ++S C + Sbjct: 368 EGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLS-CSAFFQQ 426 Query: 1769 LGRLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPM 1948 P G++ DP G+Y+R ++P+L P +I+ PW+AP S+ + A +G +YP Sbjct: 427 FFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAANCIIGVDYPR 486 Query: 1949 PIV 1957 PIV Sbjct: 487 PIV 489
>Q49AN0:CRY2_HUMAN Cryptochrome-2 - Homo sapiens (Human)| Length = 593 Score = 138 bits (347), Expect = 1e-31 Identities = 139/495 (28%), Positives = 215/495 (43%), Gaps = 19/495 (3%) Frame = +2 Query: 530 ASTTMPGSER--TVVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFYPGRCSR 700 A PG++ +V WFRK LR+ DNP R V V+I P G +R Sbjct: 12 APAPAPGTDSASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INR 70 Query: 701 W-WLKESLAHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRD 877 W +L +SL L SL L L ++R Q D + TR+ + + +P RD Sbjct: 71 WRFLLQSLEDLDTSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERD 129 Query: 878 DKIKNELLGLGISMQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKCMELPIEISPS 1045 I G+ + + N LY+ I + NG L + F + MELP + Sbjct: 130 AAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISR-MELPKK---- 184 Query: 1046 LAPWRLVPVSGIENLCTSSI-----DNLGLESSKDEESSNALLSRA-WSPGWRNAEKTLE 1207 P LV +E+ C + I + G+ S ++ L A W G A L+ Sbjct: 185 --PVGLVTSQQMES-CRAEIQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEALARLD 241 Query: 1208 DFVCHG--LLDYSKDGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNS 1375 + + +Y + M S LSPYL +G +S R Y R+ + + NS Sbjct: 242 KHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYKKVKRNS 299 Query: 1376 EAGESVNLFLRSIGLREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGY 1555 ++LF + + RE+ N P PW + + W +G TG+ Sbjct: 300 TP--PLSLFGQLLW-REFFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGF 356 Query: 1556 PLVDAGMRELWATGWTHNRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGW 1732 P +DA M +L GW H+ R V+ F + L + W G++ F ++LLDAD + W Sbjct: 357 PWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSW 416 Query: 1733 QYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILE 1912 ++S C + P G++ DP G+Y+R ++P+L P +I+ PW+AP SI + Sbjct: 417 MWLS-CSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNAPESIQK 475 Query: 1913 VAGVELGFNYPMPIV 1957 A +G +YP PIV Sbjct: 476 AAKCIIGVDYPRPIV 490
>Q6ZZY0:CRY1_SYLBO Cryptochrome-1 - Sylvia borin (Garden warbler)| Length = 620 Score = 138 bits (347), Expect = 1e-31 Identities = 134/481 (27%), Positives = 208/481 (43%), Gaps = 16/481 (3%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFYPGRCSRW-WLKESLAHLAK 736 V WFRK LR+ DNP + V V+I P G G +RW +L + L L Sbjct: 6 VHWFRKGLRLHDNPALRECIQGADTVRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLDA 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGIS 916 +L L L +IR Q D + ++ + +P RD IK G+ Sbjct: 65 NLRKLNSRLFVIRGQPA-DVFPRLFKEWNIAKLSIEYDSEPFGKERDAAIKKLASEAGVE 123 Query: 917 MQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKC--MELPIE-ISPSLAPWRLVPVS 1075 + LY+ +I + NG L + F + +E+P+E I+P + PVS Sbjct: 124 VIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMEPLEMPVETITPEVMKKCTTPVS 183 Query: 1076 GI--ENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHG--LLDYSK 1243 E S++ LG ++ + L S W G A LE + + ++ + Sbjct: 184 DDHDEKYGVPSLEELGFDT-------DGLPSAVWPGGETEALTRLERHLERKAWVANFER 236 Query: 1244 DGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIG 1417 M S LSPYL +G +S R Y ++ + + NS S+ + Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCRLFY--FKLTDLYKKVKKNSSPPLSL---YGQLL 291 Query: 1418 LREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATG 1597 RE+ N P + PW + + W +G TG+P +DA M +L G Sbjct: 292 WREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEG 351 Query: 1598 WTHNRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELG 1774 W H+ R V+ F + L I W GMK F ++LLDAD + W ++S C + Sbjct: 352 WIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLS-CSSFFQQFF 410 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPI 1954 P G++ DP+G+Y+R ++P L P ++I+ PW+AP SI + A +G NYP P+ Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESIQKAAKCIIGVNYPKPM 470 Query: 1955 V 1957 V Sbjct: 471 V 471
>Q8WP19:CRY1_MACFA Cryptochrome-1 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 586 Score = 137 bits (346), Expect = 2e-31 Identities = 133/481 (27%), Positives = 208/481 (43%), Gaps = 16/481 (3%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGAVLP-VFIWCPAEEGRFYPGRCSRW-WLKESLAHLAK 736 V WFRK LR+ DNP + + V+I P G G +RW +L + L L Sbjct: 6 VHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLDA 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGIS 916 +L L L +IR Q D + T++ + +P RD IK G+ Sbjct: 65 NLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVE 123 Query: 917 MQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKC--MELPIE-ISPSLAPWRLVPVS 1075 + LY+ +I + NG L + F K +E+P+E I+ + P+S Sbjct: 124 VIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTPLS 183 Query: 1076 GI--ENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHG--LLDYSK 1243 E S++ LG ++ + L S W G A LE + + ++ + Sbjct: 184 DDHDEKYGVPSLEELGFDT-------DGLSSAVWPGGETEALTRLERHLERKAWVANFER 236 Query: 1244 DGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIG 1417 M S LSPYL +G +S R Y ++ + + NS S+ + Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCRLFY--FKLTDLYKKVKRNSSPPLSL---YGQLL 291 Query: 1418 LREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATG 1597 RE+ N P + PW + + W +G TG+P +DA M +L G Sbjct: 292 WREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEG 351 Query: 1598 WTHNRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELG 1774 W H+ R V+ F + L I W GMK F ++LLDAD + W ++S C + Sbjct: 352 WIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS-CSSFFQQFF 410 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPI 1954 P G++ DP+G+Y+R ++P L P ++I+ PW+AP I +VA +G NYP P+ Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGINYPKPM 470 Query: 1955 V 1957 V Sbjct: 471 V 471
>Q8QG60:CRY2_CHICK Cryptochrome-2 - Gallus gallus (Chicken)| Length = 582 Score = 137 bits (345), Expect = 2e-31 Identities = 132/488 (27%), Positives = 212/488 (43%), Gaps = 12/488 (2%) Frame = +2 Query: 530 ASTTMPGSERTVVWFRKDLRIDDNPXXXXXXRDGAVLP-VFIWCPAEEGRFYPGRCSRW- 703 A++ G R+V WFR+ LR+ DNP R A L ++I P G +RW Sbjct: 4 AASPPRGFCRSVHWFRRGLRLHDNPALQAALRGAASLRCIYILDPWFAASSAVG-INRWR 62 Query: 704 WLKESLAHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDK 883 +L +SL L SL L L ++R Q T D + TR+ + + +P RD Sbjct: 63 FLLQSLEDLDNSLRKLNSRLFVVRGQPT-DVFPRLFKEWGVTRLAFEYDSEPFGKERDAA 121 Query: 884 IKNELLGLGISMQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKCMELPIEISPSLA 1051 I G+ + N LY I + NG L + F + MELP + S+ Sbjct: 122 IIKLAKEAGVEVVIENSHTLYNLDRIIELNGNKPPLTYKRFQAIISR-MELPKKPVSSIV 180 Query: 1052 PWRLVPVSGIENLCTSSIDNLGLESSKDEE-SSNALLSRAWSPGWRNAEKTLEDFVCHG- 1225 ++ ++ + D G+ S ++ ++ L W G A L+ + Sbjct: 181 SQQMETCK--VDIQENHDDVYGVPSLEELGFPTDGLAPAVWQGGETEALARLDKHLERKA 238 Query: 1226 -LLDYSKDGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVN 1396 + +Y + M S LSPYL +G +S R Y R+ ++ + NS S+ Sbjct: 239 WVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWELYKKVKRNSTPPLSL- 295 Query: 1397 LFLRSIGLREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGM 1576 + RE+ N P PW + + W +G TG+P +DA M Sbjct: 296 --YGQLLWREFFYTAATNNPKFDRMEGNPICIQIPWDKNPEALAKWAEGKTGFPWIDAIM 353 Query: 1577 RELWATGWTHNRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGWQYISGCL 1753 +L GW H+ R V+ F + L I W G++ F ++LLDAD + W ++S C Sbjct: 354 TQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSVNAGSWMWLS-CS 412 Query: 1754 PDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELG 1933 + P G++ DP G+YV+ ++P+L P +I+ PW+AP S+ + A +G Sbjct: 413 AFFQQFFHCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIG 472 Query: 1934 FNYPMPIV 1957 +YP P+V Sbjct: 473 VDYPKPMV 480
>Q70AD6:CRY1_SPAJD Cryptochrome-1 - Spalax judaei (Blind subterranean mole rat)| Length = 587 Score = 137 bits (345), Expect = 2e-31 Identities = 133/481 (27%), Positives = 208/481 (43%), Gaps = 16/481 (3%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGAVLP-VFIWCPAEEGRFYPGRCSRW-WLKESLAHLAK 736 V WFRK LR+ DNP + + V+I P G G +RW +L + L L Sbjct: 6 VHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLDA 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGIS 916 +L L L++IR Q D + T++ + +P RD IK G+ Sbjct: 65 NLRKLNSRLLVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVE 123 Query: 917 MQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKC--MELPIE-ISPSLAPWRLVPVS 1075 + LY+ +I + NG L + F K +E+P+E I+ + P+S Sbjct: 124 VIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTPLS 183 Query: 1076 GI--ENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHG--LLDYSK 1243 E S++ LG ++ + L S W G A LE + + ++ + Sbjct: 184 DDHDEKYGVPSLEELGFDT-------DGLSSAVWPGGETEALTRLERHLERRAWVANFER 236 Query: 1244 DGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIG 1417 M S LSPYL +G +S R Y ++ + + NS S+ + Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCRLFY--FKLTDLYKKVKKNSSPPLSL---YGQLL 291 Query: 1418 LREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATG 1597 RE+ N P + PW + + W +G TG+P +DA M +L G Sbjct: 292 WREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEG 351 Query: 1598 WTHNRIRVIVSSFAV-KFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELG 1774 W H+ R V+ F L I W GMK F ++LLDAD + W ++S C + Sbjct: 352 WIHHLARHAVACFLTGSDLWISWEEGMKVFEELLLDADWSINAGSWMWLS-CSSFFQQFF 410 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPI 1954 P G++ DP+G+Y+R ++P L P ++I+ PW+AP I +VA +G NYP P+ Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPM 470 Query: 1955 V 1957 V Sbjct: 471 V 471
>Q16526:CRY1_HUMAN Cryptochrome-1 - Homo sapiens (Human)| Length = 586 Score = 137 bits (345), Expect = 2e-31 Identities = 133/481 (27%), Positives = 208/481 (43%), Gaps = 16/481 (3%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGAVLP-VFIWCPAEEGRFYPGRCSRW-WLKESLAHLAK 736 V WFRK LR+ DNP + + V+I P G G +RW +L + L L Sbjct: 6 VHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLDA 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGIS 916 +L L L +IR Q D + T++ + +P RD IK G+ Sbjct: 65 NLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVE 123 Query: 917 MQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKC--MELPIE-ISPSLAPWRLVPVS 1075 + LY+ +I + NG L + F K +E+P+E I+ + P+S Sbjct: 124 VIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTPLS 183 Query: 1076 GI--ENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHG--LLDYSK 1243 E S++ LG ++ + L S W G A LE + + ++ + Sbjct: 184 DDHDEKYGVPSLEELGFDT-------DGLSSAVWPGGETEALTRLERHLERKAWVANFER 236 Query: 1244 DGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIG 1417 M S LSPYL +G +S R Y ++ + + NS S+ + Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCRLFY--FKLTDLYKKVKKNSSPPLSL---YGQLL 291 Query: 1418 LREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATG 1597 RE+ N P + PW + + W +G TG+P +DA M +L G Sbjct: 292 WREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEG 351 Query: 1598 WTHNRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELG 1774 W H+ R V+ F + L I W GMK F ++LLDAD + W ++S C + Sbjct: 352 WIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS-CSSFFQQFF 410 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPI 1954 P G++ DP+G+Y+R ++P L P ++I+ PW+AP I +VA +G NYP P+ Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPM 470 Query: 1955 V 1957 V Sbjct: 471 V 471
>Q9R194:CRY2_MOUSE Cryptochrome-2 - Mus musculus (Mouse)| Length = 592 Score = 137 bits (344), Expect = 3e-31 Identities = 133/478 (27%), Positives = 208/478 (43%), Gaps = 12/478 (2%) Frame = +2 Query: 560 TVVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFYPGRCSRW-WLKESLAHLA 733 +V WFRK LR+ DNP R V V+I P G +RW +L +SL L Sbjct: 23 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLEDLD 81 Query: 734 KSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGI 913 SL L L ++R Q D + TR+ + + +P RD I G+ Sbjct: 82 TSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGV 140 Query: 914 SMQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGI 1081 + + N LY+ I + NG L + F + MELP + P++A S Sbjct: 141 EVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISR-MELPKK--PAVAVSSQQMESCR 197 Query: 1082 ENLCTSSIDNLGLESSKDEESSNALLSRA-WSPGWRNAEKTLEDFVCHG--LLDYSKDGM 1252 + + D G+ S ++ L A W G A L+ + + +Y + M Sbjct: 198 AEIQENHDDTYGVPSLEELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRM 257 Query: 1253 KVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLRE 1426 S LSPYL +G +S R Y R+ + + NS ++LF + + RE Sbjct: 258 NANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYKKVKRNSTP--PLSLFGQLLW-RE 312 Query: 1427 YSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTH 1606 + N P PW + + W +G TG+P +DA M +L GW H Sbjct: 313 FFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIH 372 Query: 1607 NRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLD 1783 + R V+ F + L + W G++ F ++LLDAD + W ++S C + Sbjct: 373 HLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLS-CSAFFQQFFHCY 431 Query: 1784 NPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPIV 1957 P G++ DP G+Y+R ++P+L P +I+ PW+AP S+ + A +G +YP PIV Sbjct: 432 CPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPRPIV 489
>P97784:CRY1_MOUSE Cryptochrome-1 - Mus musculus (Mouse)| Length = 606 Score = 135 bits (340), Expect = 9e-31 Identities = 132/481 (27%), Positives = 208/481 (43%), Gaps = 16/481 (3%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGAVLP-VFIWCPAEEGRFYPGRCSRW-WLKESLAHLAK 736 V WFRK LR+ DNP + + V+I P G G +RW +L + L L Sbjct: 6 VHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLDA 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGIS 916 +L L L +IR Q D + T++ + +P RD IK G+ Sbjct: 65 NLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVE 123 Query: 917 MQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKC--MELPIE-ISPSLAPWRLVPVS 1075 + LY+ +I + NG L + F K +E+P + I+ + + P+S Sbjct: 124 VIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEMPADTITSDVIGKCMTPLS 183 Query: 1076 GI--ENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHG--LLDYSK 1243 E S++ LG ++ + L S W G A LE + + ++ + Sbjct: 184 DDHDEKYGVPSLEELGFDT-------DGLSSAVWPGGETEALTRLERHLERKAWVANFER 236 Query: 1244 DGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIG 1417 M S LSPYL +G +S R Y ++ + + NS S+ + Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCRLFY--FKLTDLYKKVKKNSSPPLSL---YGQLL 291 Query: 1418 LREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATG 1597 RE+ N P + PW + + W +G TG+P +DA M +L G Sbjct: 292 WREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEG 351 Query: 1598 WTHNRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELG 1774 W H+ R V+ F + L I W GMK F ++LLDAD + W ++S C + Sbjct: 352 WIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS-CSSFFQQFF 410 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPI 1954 P G++ DP+G+Y+R ++P L P ++I+ PW+AP I +VA +G NYP P+ Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPM 470 Query: 1955 V 1957 V Sbjct: 471 V 471
>Q32Q86:CRY1_RAT Cryptochrome-1 - Rattus norvegicus (Rat)| Length = 588 Score = 134 bits (337), Expect = 2e-30 Identities = 132/481 (27%), Positives = 207/481 (43%), Gaps = 16/481 (3%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRDGAVLP-VFIWCPAEEGRFYPGRCSRW-WLKESLAHLAK 736 V WFRK LR+ DNP + + V+I P G G +RW +L + L L Sbjct: 6 VHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLDA 64 Query: 737 SLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGIS 916 +L L L +IR Q D + T++ + +P RD IK G+ Sbjct: 65 NLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVE 123 Query: 917 MQSFNGDLLYEPWEIYDENG----LAFTTFNMYWEKC--MELPIE-ISPSLAPWRLVPVS 1075 + LY+ +I + NG L + F K +E+P + I+ + P+S Sbjct: 124 VIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEMPADTITSDVIGKCTTPLS 183 Query: 1076 GI--ENLCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHG--LLDYSK 1243 E S++ LG ++ + L S W G A LE + + ++ + Sbjct: 184 DDHDEKYGVPSLEELGFDT-------DGLSSAVWPGGETEALTRLERHLERKAWVANFER 236 Query: 1244 DGMKVAGTTTSL--LSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIG 1417 M S LSPYL +G +S R Y ++ + + NS S+ + Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCRLFY--FKLTDLYKKVKKNSSPPLSL---YGQLL 291 Query: 1418 LREYSRYLCFNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATG 1597 RE+ N P + PW + + W +G TG+P +DA M +L G Sbjct: 292 WREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEG 351 Query: 1598 WTHNRIRVIVSSFAVKF-LLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLPDGHELG 1774 W H+ R V+ F + L I W GMK F ++LLDAD + W ++S C + Sbjct: 352 WIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS-CSSFFQQFF 410 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSILEVAGVELGFNYPMPI 1954 P G++ DP+G+Y+R ++P L P ++I+ PW+AP I +VA +G NYP P+ Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPM 470 Query: 1955 V 1957 V Sbjct: 471 V 471
>Q84KJ5:CRYD_ARATH Cryptochrome DASH, chloroplast/mitochondrial precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 569 Score = 134 bits (336), Expect = 3e-30 Identities = 141/487 (28%), Positives = 211/487 (43%), Gaps = 35/487 (7%) Frame = +2 Query: 530 ASTTMPGSERTVVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPA--EEGRFY----PG 688 +S G T++WFR DLR+ DN +LPV+ P F+ G Sbjct: 76 SSVKRKGKGVTILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNFPKTG 135 Query: 689 RCSRWWLKESLAHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISL 868 +L E L L K+L G L LIR+ + L A R V+ H Sbjct: 136 ALRGGFLMECLVDLRKNLMKRGLNL-LIRSGKPEEILPSLAKDFGA-RTVFAHKETCSEE 193 Query: 869 VRDDKIKNELL---GLGISMQSFNGDLLYE----PWEIYDENGLAFTTFNMYWE-KCM-- 1018 V +++ N+ L G ++ G +Y P++++D + +T F E KC Sbjct: 194 VDVERLVNQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDV-YTQFRKSVEAKCSIR 252 Query: 1019 ---ELPIEI--SPSLAPWRLVPVSGIENLCTSSIDNLGLESSKDEES------SNALLSR 1165 +P+ + +PS+ W VP +++ LG+E + +A + R Sbjct: 253 SSTRIPLSLGPTPSVDDWGDVP----------TLEKLGVEPQEVTRGMRFVGGESAGVGR 302 Query: 1166 AWSPGWRNAEKTLEDFVCHGLL--DYSKDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVR 1339 + W+ + +G+L DYS + SP+L +G +S R IY+ V+ Sbjct: 303 VFEYFWKKDLLKVYKETRNGMLGPDYS-----------TKFSPWLAFGCISPRFIYEEVQ 351 Query: 1340 MQQIKCGNEGNSEAGESVNLFLRSIGLREYSRYL---CFN--FPFTHERSLLGNLKHYPW 1504 E A S L + R+Y R+L C N F R++ G W Sbjct: 352 RY------EKERVANNSTYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQGK-----W 400 Query: 1505 RADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYF 1684 D+ F+SWR TGYPL+DA M+EL TG+ NR R IV SF V+ + + W G ++F Sbjct: 401 SQDQKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWF 460 Query: 1685 WDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMP 1864 LLD D S+ W Y +G D E P+ Q Q YDP+GEYV W+ +L R+P Sbjct: 461 ETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPK-QAQNYDPEGEYVAFWLQQLRRLP 519 Query: 1865 GEWIHHP 1885 E H P Sbjct: 520 KEKRHWP 526
>Q38JU2:CRYD_SOLLC Cryptochrome DASH, chloroplast/mitochondrial precursor - Solanum| lycopersicum (Tomato) (Lycopersicon esculentum) Length = 577 Score = 130 bits (327), Expect = 3e-29 Identities = 136/489 (27%), Positives = 197/489 (40%), Gaps = 43/489 (8%) Frame = +2 Query: 548 GSERTVVWFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFY------PGRCSRWW 706 G +VWFR DLR+ DN A+LPV+ P G + G + Sbjct: 76 GKGVAIVWFRNDLRVLDNEALLRAWVSSEAILPVYCVDPRLFGTTHYFGMPKTGALRAQF 135 Query: 707 LKESLAHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKI 886 + E L L ++L G L++ + + ++ + VY H V+ +K+ Sbjct: 136 IIECLNDLKRNLVKRGLDLLIQHGKP--EDIVPSLAKAYKAHTVYAHKETCSEEVKVEKM 193 Query: 887 KNELL---------GLGISMQSFNGDLLYEPW--EIYDENGLAF---------TTFNMYW 1006 L G+G S N L W +Y + L F T F Sbjct: 194 VTRNLQKLVSPSSGGIGNDPGSGNTTKLELVWGSTMYHIDDLPFDCESLPDVYTQFRKSV 253 Query: 1007 E------KCMELPIEISP--SLAPWRLVPVSGIENLCTSSIDNLGLESSKDEESSN---- 1150 E C +LP P + W VP + LGL+ K + N Sbjct: 254 EYKSKVRNCTKLPTSFGPPPEVGDWGHVP----------QVSELGLQQEKVSKGMNFVGG 303 Query: 1151 --ALLSRAWSPGWRNAEKTLEDFVCHGLL--DYSKDGMKVAGTTTSLLSPYLHYGEVSVR 1318 A L R W+ + +G+L DYS + SP+L G +S R Sbjct: 304 ESAALGRVHDYFWKKDLLKVYKETRNGMLGADYS-----------TKFSPWLASGSLSPR 352 Query: 1319 KIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRYLCFNFPFTHERSLLGNLKHY 1498 IY+ V+ E + +S L + R+Y R+L ++ + Sbjct: 353 FIYEEVKRY------EKERLSNDSTYWVLFELIWRDYFRFLSIKLANLLFQAGGPQKVNI 406 Query: 1499 PWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMK 1678 W D+ F +WR+G TGYPL+DA M+EL ATG+ NR R IV SF V+ + I W G + Sbjct: 407 NWSQDQTMFDAWRRGQTGYPLIDANMKELAATGYMSNRGRQIVCSFLVRDMGIDWRMGAE 466 Query: 1679 YFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELAR 1858 +F LLD D S+ W Y +G D E P+ Q Q YDP+GE+V W+PEL Sbjct: 467 WFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPK-QAQNYDPEGEFVAYWLPELRA 525 Query: 1859 MPGEWIHHP 1885 +P E H P Sbjct: 526 LPREKRHSP 534
>Q651U1:CRYD_ORYSJ Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa| subsp. japonica (Rice) Length = 582 Score = 129 bits (324), Expect = 6e-29 Identities = 143/491 (29%), Positives = 211/491 (42%), Gaps = 45/491 (9%) Frame = +2 Query: 548 GSERTVVWFRKDLRIDDNPXXXXXXR-DGAVLPVFIWCP---AEEGRFY----PGRCSRW 703 G +VWFR DLR+ DN AVLPV+ P A ++ G Sbjct: 82 GGGVAIVWFRNDLRVLDNEAVVRAWAASDAVLPVYCVDPRISAGSTHYFGFPKTGALRAQ 141 Query: 704 WLKESLAHLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDK 883 +L E L L ++L G L LIR D L ++ A V + L+ + Sbjct: 142 FLIECLEDLKRNLTKQGLDL-LIRHGKPEDILPSIAKAVTAHTVYAHKETCSEELLVEHL 200 Query: 884 IKNELLGLGI--------------SMQSFNGDLLYEPWEI-YDENGL--AFTTFNMYWEK 1012 ++ L + I +Q G LY ++ + N L +T F E Sbjct: 201 VRKGLEQVVIPQGGASNQKKPRNPKLQLIWGATLYHVDDLPFSVNNLPDVYTQFRKAVES 260 Query: 1013 ------CMELPIEISPSLAPWRLVPVSGIENL----CTSSIDNLGLESSKDEES------ 1144 C +LP PSL P P SG++ + ++++LGL +K E+ Sbjct: 261 KSSVRNCSKLP----PSLGP---PPGSGLDEIGGWGTVPTLESLGLSMTKAEKGMHFVGG 313 Query: 1145 SNALLSRAWSPGWRNAEKTLEDFVCHGLL--DYSKDGMKVAGTTTSLLSPYLHYGEVSVR 1318 +A L R W+ + + +G+L DYS + SP+L G +S R Sbjct: 314 ESAALGRVHEYFWKKDQLKVYKETRNGMLGPDYS-----------TKFSPWLASGSLSPR 362 Query: 1319 KIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRYLCFNFPFTHERSLLGNLKHY 1498 I + V+ E A +S L + R+Y R++ + + + LG ++ Sbjct: 363 YICEEVKRY------EKQRIANDSTYWVLFELIWRDYFRFI--SAKYGNSIFHLGGPRNV 414 Query: 1499 P--WRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTWG 1672 W D+ F+SWR G TGYPL+DA M+EL ATG+ NR R IV SF V+ + I W G Sbjct: 415 ESKWSQDQALFESWRDGRTGYPLIDANMKELLATGFMSNRGRQIVCSFLVRDMGIDWRMG 474 Query: 1673 MKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPEL 1852 ++F LLD D S+ W Y +G D E P+ Q + YDPDGEYV W+PEL Sbjct: 475 AEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPK-QAKTYDPDGEYVAYWLPEL 533 Query: 1853 ARMPGEWIHHP 1885 + E + P Sbjct: 534 RSIAKERRNFP 544
>Q5IFN2:CRYD_OSTTA Cryptochrome DASH, chloroplast/mitochondrial precursor - Ostreococcus| tauri Length = 546 Score = 124 bits (311), Expect = 2e-27 Identities = 143/514 (27%), Positives = 222/514 (43%), Gaps = 48/514 (9%) Frame = +2 Query: 548 GSERTVVWFRKDLRIDDNPXXXXXXR------DGAVLPVFIWC-----PAEEG--RFYPG 688 G R V+WFR DLR+ DN D V+PV+++ P++ G RF G Sbjct: 2 GRTRVVIWFRNDLRLLDNACVARAATLASESSDVEVVPVYVFDETYFKPSKRGLARFGAG 61 Query: 689 RCSRWWLKESLAHLAKSLEALGCPLVL-------IRAQTTLDALLQCVHSIRATRVVYNH 847 R + E + L SL ALG L++ + A+ TL + T V Sbjct: 62 RGK--FTLECVGDLKTSLRALGSDLLVRCGKSRDVIAELTLTGANDRTIILTQTEVTSEE 119 Query: 848 LYDPISLVRDDKIKNELLGLGISMQSFNGDLLYE----PWEIYDENGLA-----FTTF-N 997 +++ R + + +M+ G LY P+++ +GL+ FT F N Sbjct: 120 TEMDVAVERATRERARGGAASATMERHWGSTLYHIDDVPFDV--TSGLSDLPDVFTPFRN 177 Query: 998 MYWEKCMELPIEISPSLAPWRLVPVS--GIENLCTSSIDNLGLESSK-----DEESSNAL 1156 KC + +P+ VP S G E + S +L SS+ D+ + L Sbjct: 178 KVESKCKVRDVIPAPTANELGHVPASVEGFEWMPKPS--DLPFASSEIAMDCDKRIKDCL 235 Query: 1157 LSRA---WSPGWRNAEKTLEDFVCHG--LLDY--SKDGMKVAGTTTSLLSPYLHYGEVSV 1315 R+ + G NA ++ ++ L Y +++GM + G ++ L+P+L G VS Sbjct: 236 DERSVLDFKGGESNALARVKYYLWESDRLATYFETRNGM-LGGDYSTKLAPWLALGCVSP 294 Query: 1316 RKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREYSRYLCFNF--PFTHERSLLGNL 1489 R + +R E +S + + R++ ++ H G Sbjct: 295 RHVVSEIRRY------ESERVENKSTYWVIFELIWRDFFKFFALKHGNKIFHLDGTAG-- 346 Query: 1490 KHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTW 1669 + W+ DE K+W+ G TGYPL+DA MREL ATG+ NR R V+S+ I W Sbjct: 347 RRASWKRDEKILKAWKTGTTGYPLIDANMRELAATGFMSNRGRQNVASWLALDAGIDWRH 406 Query: 1670 GMKYFWDVLLDADIESDILGWQYISGCLPDGHELGRLD--NPEVQGQKYDPDGEYVRTWI 1843 G +F LLD D S+ W C G GR++ N Q + YDP GEY++TW+ Sbjct: 407 GADWFEHHLLDYDTASNWGNW-----CAAAGMTGGRINRFNIAKQTKDYDPAGEYIKTWV 461 Query: 1844 PELARMPGEWIHHPWDAPSSILEVAGVELGFNYP 1945 ELA +P +I P AP + + +G NYP Sbjct: 462 KELAEVPAAYIADPNQAPRELRD----RIGLNYP 491
>P05066:PHR_YEAST Deoxyribodipyrimidine photo-lyase, mitochondrial precursor -| Saccharomyces cerevisiae (Baker's yeast) Length = 565 Score = 123 bits (309), Expect = 4e-27 Identities = 131/504 (25%), Positives = 209/504 (41%), Gaps = 34/504 (6%) Frame = +2 Query: 569 WFRKDLRIDDN-------PXXXXXXRDGAVLPVFIWCPAEEGRFYPGRCSRW---WLKES 718 WFR DLR+ DN + A ++ E + S W ++ + Sbjct: 80 WFRNDLRLYDNVGLYKSVALFQQLRQKNAKAKLYAVYVINEDDWRAHMDSGWKLMFIMGA 139 Query: 719 LAHLAKSLEALGCPLVLIRAQTTLDALLQC-------------VHSIRATRVVYNHLYDP 859 L +L +SL L PL+L T L V S T + N Y Sbjct: 140 LKNLQQSLAELHIPLLLWEFHTPKSTLSNSKEFVEFFKEKCMNVSSGTGTIITANIEYQT 199 Query: 860 ISLVRDDKI-KNELLGLGISMQSFNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEI 1036 L RD ++ +NE + ++ ++ + P I + G ++ F +++K + Sbjct: 200 DELYRDIRLLENE--DHRLQLKYYHDSCIVAPGLITTDRGTNYSVFTPWYKKWVLYVNNY 257 Query: 1037 SPSLAPWRLVPVSGIENLCTSSIDNLG-LESSKDEESSNALLSRAW---SPGWRNAEKTL 1204 S + + + IE L + L + S +E + W A L Sbjct: 258 KKSTS--EICHLHIIEPLKYNETFELKPFQYSLPDEFLQYIPKSKWCLPDVSEEAALSRL 315 Query: 1205 EDFVCHGLLDYS--KDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSE 1378 +DF+ Y+ KD + + GT S LS Y+ G +S R I V C + S+ Sbjct: 316 KDFLGTKSSKYNNEKDMLYLGGT--SGLSVYITTGRISTRLI---VNQAFQSCNGQIMSK 370 Query: 1379 A---GESVNLFLRSIGLREYSRYLCFNFPFTHERSLLG-NLKHYPWRADEDRFKSWRQGM 1546 A S F++ + R++ R+ N+P+T + W + F+ W G Sbjct: 371 ALKDNSSTQNFIKEVAWRDFYRHCMCNWPYTSMGMPYRLDTLDIKWENNPVAFEKWCTGN 430 Query: 1547 TGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDIL 1726 TG P+VDA MR+L TG+ +NR R+I +SF K LLI W WG ++F L+D D S++ Sbjct: 431 TGIPIVDAIMRKLLYTGYINNRSRMITASFLSKNLLIDWRWGERWFMKHLIDGDSSSNVG 490 Query: 1727 GWQYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDAPSSI 1906 GW + S D R+ N ++Q +KYDP +V+ W+PEL + P Sbjct: 491 GWGFCSSTGIDAQPYFRVFNMDIQAKKYDPQMIFVKQWVPELISSENK-------RPE-- 541 Query: 1907 LEVAGVELGFNYPMPIVELHMARE 1978 NYP P+V+L +RE Sbjct: 542 ----------NYPKPLVDLKHSRE 555
>Q7SI68:CRYD_NEUCR Putative cryptochrome DASH, mitochondrial precursor - Neurospora| crassa Length = 745 Score = 115 bits (288), Expect = 1e-24 Identities = 140/559 (25%), Positives = 224/559 (40%), Gaps = 97/559 (17%) Frame = +2 Query: 542 MPGSERTVVWFRKDLRIDDNPXXXXXXRDGA------VLPVFIWCPAEE---GRFYP--- 685 M S+ + R++LR+ DNP + +LPV+++ PA++ F P Sbjct: 1 MAPSKVVIYAMRRELRLSDNPIFHHLSNPESKHGFSHLLPVYVF-PAQQIDLSGFVPKGS 59 Query: 686 --------------GRCSRW---WLKESLAHLAKSLEALGCPLVLIRAQTTLDALLQCVH 814 RC + +L ES+ L SL+++G L L+RA D + V Sbjct: 60 ENPHPAPKSAVGGYARCGPYRAKFLAESVWDLKTSLQSIGSDL-LVRAGPYKDVIQSLVE 118 Query: 815 SIRATRVVYNHLYDPISLVRDDKIKNELLGLGISMQSFNGDLLY-EPWEIYD-ENGLA-- 982 ++A ++ ++K + + + + + L E + I+D + G+ Sbjct: 119 GLKAKECQVGAVWMTSHEGSEEKSEEKTVASFCAKSGIDFKLWDDEKYLIHDRDTGITHL 178 Query: 983 ------FTTFNMYWEKCME-----LPIEISPSLAPWRLV-------PVSGIENLCTSSID 1108 FTT+ E E LP+ +L + + P I C +D Sbjct: 179 NDLPDVFTTYRKQIEPLREKARKTLPVPEKGALPAYPDIDMIPSQQPPFNIPGTCEELVD 238 Query: 1109 NL-----GLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMK--VAGT 1267 + + A S + G +A K ++ V G + KD + Sbjct: 239 AVVRPVKNFLKDLPDFPEKAESSHPFRGGETSAHKRIDHLVLSGGMKSYKDSRNGLLGPD 298 Query: 1268 TTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGN---------EGNSEAGESVNLFLRSIGL 1420 ++ LS YL G V+ R+I+ + + G EG+++ E+V + L Sbjct: 299 FSTKLSAYLAQGCVTARQIHHALVAYEDGTGTKYKGADGFGEGDNQGTETVRMELL---W 355 Query: 1421 REYSRYLC-------------FNFPFTHERSLLGNLKHYPWRADE--------------- 1516 R+Y R LC FN T G K Y WR Sbjct: 356 RDYMR-LCHQKYGDKLFRVEGFNGKHTDYE---GEDKKYGWRTANTSIALPGQEPTPEKV 411 Query: 1517 -DRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDV 1693 + + G TG L+DA REL TG+T NR R V+SF K L I W +G +++ + Sbjct: 412 SEILARFNAGTTGMGLIDASQRELIHTGYTSNRTRQNVASFLAKHLEIDWRYGAEWYEML 471 Query: 1694 LLDADIESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMPG-E 1870 L+D D+ S+ WQY++G D R+ NP Q YD DG YVRTW+PE+A+ E Sbjct: 472 LVDYDVSSNWANWQYVAGVGNDPRGAARIFNPVKQAFDYDKDGTYVRTWVPEVAKFENLE 531 Query: 1871 WIHHPWDAPSSILEVAGVE 1927 + W A L+ AG+E Sbjct: 532 NVFQAWTASKEDLKTAGLE 550
>Q5QXE0:CRYD_IDILO Cryptochrome DASH - Idiomarina loihiensis| Length = 449 Score = 107 bits (268), Expect = 2e-22 Identities = 123/450 (27%), Positives = 200/450 (44%), Gaps = 19/450 (4%) Frame = +2 Query: 572 FRKDLRIDDN-PXXXXXXRDGAVLPVFIWCPAEE-----GRFYPGRCSRWWLKESLAHLA 733 FR DLR++DN R ++ F + P + G G+ +L++SL L Sbjct: 21 FRNDLRVEDNLALYEAAQRSETLICCFCFNPTQNKYGHYGIPAMGKHRFTFLQQSLKQLR 80 Query: 734 KSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGI 913 LE G L+++ T D +L T ++ D I L + E L LG+ Sbjct: 81 TELEMRGQKLIVLTG--TFDRIL--------TELISERQVDAIFLSQHQGYY-ERLQLGL 129 Query: 914 SMQSFNGDLLYEPWE--IYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGIEN 1087 Q F +E ++ E L F ++ E + ++ P + + PV+ + + Sbjct: 130 LQQRFPFLPFHETPNNTLFSEQELPFELADLP-ETFSQFRKKVEPLSRNFSVQPVNALPS 188 Query: 1088 LCTSSIDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCH---GLLDYSKDGMKV 1258 L +I G ++ E+ N L S + G R A L + G +++ + Sbjct: 189 L-PKNISYPGFKA----ETLNELASDDFEGGERAALTHLTSYFSGESAGTYKQTRNALDD 243 Query: 1259 AGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGL--REYS 1432 ++T SP+L G +SVR+I +R + +E GE+ + + S L REY Sbjct: 244 FSSSTKF-SPWLAQGCLSVRQIMAALRAYE--------TEFGENESSYWISFELLWREYF 294 Query: 1433 RYLCFNFPFTHERSLLG----NLKHYPWRADEDRFKSWRQGMTGYPLVDAGMRELWATGW 1600 F + H + L + K +RF+ W G T YP+V+A M++L ATG+ Sbjct: 295 ----FWYALKHGKRLFAFSGLSGKSPKTSFYSERFQKWCSGNTPYPIVNACMKQLNATGY 350 Query: 1601 THNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYIS--GCLPDGHELG 1774 NR R +V+S V L + W +G YF L+D D+ S+ WQY++ G P GH Sbjct: 351 MSNRGRQLVASCFVHELSLDWRYGAAYFEQQLIDYDVSSNWGNWQYLAGVGADPRGH--- 407 Query: 1775 RLDNPEVQGQKYDPDGEYVRTWIPELARMP 1864 R N E Q ++YDPD E++ W +L+ P Sbjct: 408 RQFNLEKQTERYDPDNEFIERWAGDLSGQP 437
>Q9KS67:CRY2_VIBCH Cryptochrome-like protein cry2 - Vibrio cholerae| Length = 504 Score = 94.7 bits (234), Expect = 2e-18 Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 8/302 (2%) Frame = +2 Query: 1199 TLEDFVCHGLLDY--SKDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGN 1372 TLEDF +Y S +A S +SPYL +G +S+R++YQ + Sbjct: 201 TLEDFFARRGREYYRSISSPSLARHACSRMSPYLAWGNISLREMYQTLLKHW-------- 252 Query: 1373 SEAGESVNLFLRSIGLREYSRYL------CFNFPFTHERSLLGNLKHYPWRADEDRFKSW 1534 S AG +L S L + ++ C F +L A + +W Sbjct: 253 SVAGFRRSLIALSSRLHWHCHFIQKFESEC-EMEFRCVNRAYDSLLQQSSDAPAAQLAAW 311 Query: 1535 RQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIE 1714 + G TG PLVDA MR L TG+ + R+R ++ S + + W G+ Y + LD + Sbjct: 312 QTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHMNVDWRAGVTYLAQLFLDFEPG 371 Query: 1715 SDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPELARMPGEWIHHPWDA 1894 +Q +G G R+ NP Q Q++D +G+++ W+PELA++P + PW Sbjct: 372 IHYPQFQMQAGVT--GTNTIRIYNPTKQAQEHDSEGQFIHKWVPELAQVPVPLLFEPWLM 429 Query: 1895 PSSILEVAGVELGFNYPMPIVELHMARECLDDAISTMWQLDTAEKLAELDGEVVEDNLSH 2074 ++ V L Y P+++L + + A +WQ +KL + E + H Sbjct: 430 TPLEAQMYQVPLESPYLKPVMDLEASAK---QARDRLWQW---QKLPAVQAEAMRILARH 483 Query: 2075 IK 2080 ++ Sbjct: 484 VR 485
>Q87JP5:CRYD_VIBPA Cryptochrome DASH - Vibrio parahaemolyticus| Length = 445 Score = 91.7 bits (226), Expect = 1e-17 Identities = 124/448 (27%), Positives = 182/448 (40%), Gaps = 24/448 (5%) Frame = +2 Query: 569 WFRKDLRIDDNPXXXXXXRDGAVLPVFIWCPAEEGRFYP--------GRCSRWWLKESLA 724 WF DLR+ DN L V ++C F GR + ++ SL Sbjct: 9 WFTFDLRLHDNSLLVDASSFLDEL-VCLYCRPSVTPFLHHFAQEVTLGRARQKFIDASLC 67 Query: 725 HLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDD-----KIK 889 L +L LG L + AL + + T HLY D+ K++ Sbjct: 68 ELNDALGQLGQRLWTLDLPP-YQALKYAIQYLSVT-----HLYSDAMAGSDEQSILHKLQ 121 Query: 890 NELLGLGISMQSFNGDLLYEPWEIYDENGLAFT------TFNMYWEKCMELPIEISPSLA 1051 +E L I S ++DE+ L FT TF + KC+E P A Sbjct: 122 DEYPHLVIVQHSVRS--------LFDESKLPFTLPDLPETFTQF-RKCVEGIDIAHPIDA 172 Query: 1052 PWRLVPVSGIENLCTSS---IDNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCH 1222 P RL P+ L T S D L S E S A R + G ++ K + Sbjct: 173 PSRLPPMPKGAQLPTLSSFYFDESALFSG-GEWSGLAHCRRYFFSGLASSYKETRN---- 227 Query: 1223 GLLDYSKDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLF 1402 GL DGM + + SP+L G VS R I+ +++ + G A +S Sbjct: 228 GL-----DGMAYS----TKFSPWLALGCVSPRMIHAMLKQYEQTQG------ANDSTYWI 272 Query: 1403 LRSIGLREYSRYLCFNFPFTHERSLLGNLKHYPWRAD--EDRFKSWRQGMTGYPLVDAGM 1576 + REY + + + G +++ P RF+ W+ G T YP+V+A M Sbjct: 273 YFELLWREY--FYWYARCYQQRLFRFGGIRNQPPLTSFYAHRFQQWKNGTTPYPIVNACM 330 Query: 1577 RELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCLP 1756 +L TG+ NR R +V+S V L + W +G YF L+D D+ S+ WQY++G Sbjct: 331 HQLNHTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLIDYDVGSNWGNWQYLAGVGA 390 Query: 1757 DGHELGRLDNPEVQGQKYDPDGEYVRTW 1840 D R N E Q Q YDP+ E++ W Sbjct: 391 DPRG-SRQFNLEKQTQMYDPNHEFIERW 417
>Q9KR33:CRYD_VIBCH Cryptochrome DASH - Vibrio cholerae| Length = 461 Score = 88.2 bits (217), Expect = 2e-16 Identities = 115/449 (25%), Positives = 177/449 (39%), Gaps = 25/449 (5%) Frame = +2 Query: 569 WFRKDLRIDDNPXXXXXXRDGAVLPVFIWCPAEEGRFYP--------GRCSRWWLKESLA 724 WF DLR++DNP + L + ++C F G + +L ++LA Sbjct: 9 WFTNDLRVNDNPLLEQASQQVDRL-ICLYCYPSITPFLARYAQQTQWGEAKKRFLNQTLA 67 Query: 725 HLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLG 904 L SL LG L + AL + + T + + + +I + Sbjct: 68 DLDHSLSTLGQKL-WVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQDFSS 126 Query: 905 LGISMQSFNGDLLYEPWEIYDENGL--AFTTFNMYWEKC-----MELPIEISPSLAPWRL 1063 + I Q+ + LL EP + L FT F E M P + P W+L Sbjct: 127 VHIHQQALHS-LLSEPQLPFALEALPSTFTQFRKQVETISLSAPMGYPHVLPPIEQGWQL 185 Query: 1064 VPVSGIENLCTSSI---DNLGLESSKDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLD 1234 + + S+ + GL ++ SS L SR ++ L+ +D Sbjct: 186 PLMDIVTEPNHSAFVGGEQAGLTHCQNYFSS-LLPSR-----YKETRNGLDG------MD 233 Query: 1235 YSKDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSI 1414 YS + SP+L G VS + IY +++ + G A +S + Sbjct: 234 YS-----------TKFSPWLALGAVSPKTIYAMLQRYEAVHG------ANDSTYWIFFEL 276 Query: 1415 GLREYSRYLC-------FNFPFTHERSLLGNLKHYPWRADEDRFKSWRQGMTGYPLVDAG 1573 REY + F F E+ L + RF W+ G T +P+V+A Sbjct: 277 LWREYFYWYARRYGAKLFRFSGIGEKKPLTSFY-------AQRFLQWKHGETPFPIVNAC 329 Query: 1574 MRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDVLLDADIESDILGWQYISGCL 1753 MR+L TG+ NR R +V+S V L + W +G YF L+D D+ S+ WQY++G Sbjct: 330 MRQLNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVG 389 Query: 1754 PDGHELGRLDNPEVQGQKYDPDGEYVRTW 1840 D R N E Q YDP GE+V W Sbjct: 390 ADPRG-SRQFNLEKQAHTYDPKGEFVAKW 417
>Q4I1Q6:CRYD_GIBZE Putative cryptochrome DASH - Gibberella zeae (Fusarium graminearum)| Length = 678 Score = 82.8 bits (203), Expect = 7e-15 Identities = 46/113 (40%), Positives = 59/113 (52%) Frame = +2 Query: 1514 EDRFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMKYFWDV 1693 +D W +G TG LVDA REL TG+T NR R V+S+ K L I W G +Y+ Sbjct: 385 KDMIDRWIRGTTGMGLVDASQRELQLTGYTSNRARQNVASYLTKSLGIDWRLGAEYYEQS 444 Query: 1694 LLDADIESDILGWQYISGCLPDGHELGRLDNPEVQGQKYDPDGEYVRTWIPEL 1852 L+D D S+ WQY + C D R N Q YD DG + RTW+ E+ Sbjct: 445 LIDYDTHSNWGNWQYQASCGNDPR--SRSFNQVKQAFDYDQDGRFTRTWVNEV 495
>Q05380:YAT1_SYNP1 Hypothetical 31.6 kDa protein in atpI 5'region - Synechococcus sp.| (strain PCC 6716) Length = 284 Score = 61.2 bits (147), Expect = 2e-08 Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 4/291 (1%) Frame = +2 Query: 569 WFRKDLRIDDNPXXXXXXRDG-AVLPVFIWCPAEEGRFYPGRCSRWWLKESLAHLAKSLE 745 W R+DLR+ DN + V+ VF + PA +L L L ++ + Sbjct: 9 WHRRDLRLADNLGLYAARQHTPTVVGVFCFDPALLQGQDVAAVRVAYLLGCLQALKEAYQ 68 Query: 746 ALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLGLGISMQS 925 G L++++ + + +++AT V ++ +P + RD + L LGI++ Sbjct: 69 QRGGCLLMVQGDPR-QVIPEVATTLKATAVHWHEDVEPYARERDRVVAATLNDLGIAVHR 127 Query: 926 FNGDLLYEPWEIYDENGLAFTTFNMYWEKCMELPIEISPSLAPWRLVPVSGIENLCTSSI 1105 LL+ P + + G +T + +W LP + +P P P+ E I Sbjct: 128 QWDQLLHPPSAVQTQQGQPYTVYTPFWRNWSALP-KAAPVPPPPDFAPLEATE------I 180 Query: 1106 DNLGLESSKD---EESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYSKDGMKVAGTTTS 1276 ++ L S+ D + S +L +PG A + L F H + +Y + T+ Sbjct: 181 ASIPLPSTHDLGFDWSGELIL----APGEAAAAQQLAHFSQHAIYEYGEQRNYPGRPGTA 236 Query: 1277 LLSPYLHYGEVSVRKIYQLVRMQQIKCGNEGNSEAGESVNLFLRSIGLREY 1429 LLSP L +G + +R ++ + + + EA S+ + + + RE+ Sbjct: 237 LLSPALKFGVIGIRTVW---AASEAALEHARSDEARASIRTWQQELAWREF 284
>Q8LB72:PHR2_ARATH Blue-light photoreceptor PHR2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 447 Score = 47.8 bits (112), Expect = 2e-04 Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 20/275 (7%) Frame = +2 Query: 563 VVWFRKDLRIDDNPXXXXXXRD-GAVLPVFIWCPAEEGRF-----YPGRCSRWWLKESLA 724 VVWFR DLR+ DN + +VLPV+ + P + G+ G +L ES++ Sbjct: 118 VVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVS 177 Query: 725 HLAKSLEALGCPLVLIRAQTTLDALLQCVHSIRATRVVYNHLYDPISLVRDDKIKNELLG 904 L K+L+A G LV +R L++ I A V + + + KI+ + Sbjct: 178 ELRKNLQARGSNLV-VRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMKE 236 Query: 905 LGISMQSFNGDLLYE----PWEIYDENGLAFTTFNMYWEKCMELPI-EISPSLAPWRLVP 1069 G+ ++ F G LY P++I D + + + +K +L I + +L + +P Sbjct: 237 EGVEVKYFWGSTLYHLDDLPFKIED----LPSNYGAFKDKVQKLEIRKTIAALDQLKSLP 292 Query: 1070 VSG-IENLCTSSIDNLGLESS--KDEESSNALLSRAWSPGWRNAEKTLEDFVCHGLLDYS 1240 G +E S+ +LG+ + +E ++ G A L+ F S Sbjct: 293 SRGDVELGDIPSLLDLGISPTPRTSQEGKPTMVG-----GETEALTRLKSFAADCQARLS 347 Query: 1241 KDGMK-----VAGTTTSL-LSPYLHYGEVSVRKIY 1327 K K V G S +SP+L G +S R ++ Sbjct: 348 KGNQKGGNNSVFGANFSCKISPWLAMGSISPRSMF 382
>Q8K4Z5:SF3A1_MOUSE Splicing factor 3 subunit 1 - Mus musculus (Mouse)| Length = 791 Score = 44.7 bits (104), Expect = 0.002 Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Frame = +1 Query: 79 TSAGPC*GCPRKRSRAPRPCRAQIVVELTILRTSPATA-----RDSVGAPCPQSIH-PSL 240 +SA P PR + P P R +V + ++ P + SV AP P IH P + Sbjct: 566 SSAPPITSVPRPPAMPP-PVRTTVVSAVPVMPRPPMASVVRLPPGSVIAPMPPIIHAPRI 624 Query: 241 AVTSCWTLAPP--APRPHPRILSPTGVIASPPTAHHQDPASVRPFDP 375 V APP APRP P I+ PT + +PP A PA + P P Sbjct: 625 NVVPMPPAAPPIMAPRPPPMIV-PTAFVPAPPVAPVPAPAPMPPVHP 670
>Q15459:SF3A1_HUMAN Splicing factor 3 subunit 1 - Homo sapiens (Human)| Length = 793 Score = 44.3 bits (103), Expect = 0.003 Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Frame = +1 Query: 79 TSAGPC*GCPRKRSRAPRPCRAQIVVELTILRTSPATA-----RDSVGAPCPQSIH-PSL 240 +SA P PR + P P R +V + ++ P + SV AP P IH P + Sbjct: 568 SSAPPITSVPRPPTMPP-PVRTTVVSAVPVMPRPPMASVVRLPPGSVIAPMPPIIHAPRI 626 Query: 241 AVTSCWTLAPP--APRPHPRILSPTGVIASPPTAHHQDPASVRPFDP 375 V APP APRP P I+ PT + +PP A PA + P P Sbjct: 627 NVVPMPPSAPPIMAPRPPPMIV-PTAFVPAPPVAPVPAPAPMPPVHP 672
>Q9UKN7:MYO15_HUMAN Myosin-XV - Homo sapiens (Human)| Length = 3530 Score = 35.8 bits (81), Expect = 0.97 Identities = 19/46 (41%), Positives = 23/46 (50%) Frame = +1 Query: 268 PPAPRPHPRILSPTGVIASPPTAHHQDPASVRPFDPDSLQLAVLPR 405 PPAP+P PR LS + SPP + P P S L+ LPR Sbjct: 644 PPAPQPAPRTLSHWSALLSPPVPPRPPSSGPPPAPPLSPALSGLPR 689
>P10274:PRO_HTL1A Gag-Pro polyprotein - Human T-cell leukemia virus 1 (strain Japan| ATK-1 subtype A) (HTLV-1) Length = 651 Score = 35.0 bits (79), Expect = 1.7 Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 20/75 (26%) Frame = +1 Query: 211 PCPQSIHPSLAVTSCWTLAP----------------PAPRPHPRILSPTGVIASPPTAH- 339 PCP P+ C L P PA PHP+ L G + SPPT Sbjct: 379 PCPLCQDPTHWKRDCPRLKPTIPEPEPEEDALLLDLPADIPHPKNLHRGGGLTSPPTLQQ 438 Query: 340 ---HQDPASVRPFDP 375 +QDPAS+ P P Sbjct: 439 VLPNQDPASILPVIP 453
>P03362:POL_HTL1A Gag-Pro-Pol polyprotein - Human T-cell leukemia virus 1 (strain| Japan ATK-1 subtype A) (HTLV-1) Length = 1462 Score = 35.0 bits (79), Expect = 1.7 Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 20/75 (26%) Frame = +1 Query: 211 PCPQSIHPSLAVTSCWTLAP----------------PAPRPHPRILSPTGVIASPPTAH- 339 PCP P+ C L P PA PHP+ L G + SPPT Sbjct: 379 PCPLCQDPTHWKRDCPRLKPTIPEPEPEEDALLLDLPADIPHPKNLHRGGGLTSPPTLQQ 438 Query: 340 ---HQDPASVRPFDP 375 +QDPAS+ P P Sbjct: 439 VLPNQDPASILPVIP 453
>Q9P2R6:RERE_HUMAN Arginine-glutamic acid dipeptide repeats protein - Homo sapiens| (Human) Length = 1566 Score = 29.3 bits (64), Expect(2) = 1.8 Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 2/46 (4%) Frame = +1 Query: 268 PPAPRPHPRILSPTGVIASPPTAHHQDPA--SVRPFDPDSLQLAVL 399 PP P PHP + TG P H P P P SLQ L Sbjct: 817 PPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPL 862 Score = 24.3 bits (51), Expect(2) = 1.8 Identities = 13/43 (30%), Positives = 17/43 (39%) Frame = +3 Query: 99 GVPAKAKPSPTPMPRADCCRAHDPSHLARHSPRFGWCPVPSIH 227 G P P PTP A + + A + P+ PVP H Sbjct: 757 GTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTH 799
>O70218:HMX1_MOUSE Homeobox protein HMX1 - Mus musculus (Mouse)| Length = 332 Score = 33.9 bits (76), Expect = 3.7 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = +1 Query: 139 RAQIVVELTILRTSPATARDSVGAPCPQSIHPSLAVTSC--WTLAPPAPRPHPRILSPTG 312 + Q+ EL SP A+ V P P A + LAPPAP P P +L +G Sbjct: 247 KRQLAAELEAASLSPPGAQRLVRVPVLYHESPPAAAGPALPFPLAPPAPAPPPPLLGFSG 306 Query: 313 VIASPPTA 336 +A P A Sbjct: 307 ALAYPLAA 314
>P0C210:PRO_HTL1L Gag-Pro polyprotein - Human T-cell leukemia virus 1 (isolate| Melanesia mel5 subtype C) (HTLV-1) Length = 651 Score = 33.5 bits (75), Expect = 4.8 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 20/75 (26%) Frame = +1 Query: 211 PCPQSIHPSLAVTSCWTLAP----------------PAPRPHPRILSPTGVIASPPTAH- 339 PCP P+ C L P PA PHP+ L G + SPPT Sbjct: 379 PCPLCQDPTHWKRDCPRLKPAIPEPEPEEDALLLDLPADIPHPKNLHRGGGLTSPPTLRQ 438 Query: 340 ---HQDPASVRPFDP 375 ++DPAS+ P P Sbjct: 439 VHPNKDPASILPVIP 453
>P14074:PRO_HTL1C Gag-Pro polyprotein - Human T-cell leukemia virus 1 (isolate| Caribbea HS-35 subtype A) (HTLV-1) Length = 651 Score = 33.5 bits (75), Expect = 4.8 Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 20/75 (26%) Frame = +1 Query: 211 PCPQSIHPSLAVTSCWTLAP----------------PAPRPHPRILSPTGVIASPPTAH- 339 PCP P+ C L P PA PHP+ L G + SPPT Sbjct: 379 PCPLCQDPTHWKRDCPRLKPTIPEPEPEEDALLLDLPADIPHPKNLHRGGGLTSPPTLQQ 438 Query: 340 ---HQDPASVRPFDP 375 +QDP S+ P P Sbjct: 439 VLPNQDPTSILPVIP 453
>P0C211:POL_HTL1L Gag-Pro-Pol polyprotein - Human T-cell leukemia virus 1 (isolate| Melanesia mel5 subtype C) (HTLV-1) Length = 1462 Score = 33.5 bits (75), Expect = 4.8 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 20/75 (26%) Frame = +1 Query: 211 PCPQSIHPSLAVTSCWTLAP----------------PAPRPHPRILSPTGVIASPPTAH- 339 PCP P+ C L P PA PHP+ L G + SPPT Sbjct: 379 PCPLCQDPTHWKRDCPRLKPAIPEPEPEEDALLLDLPADIPHPKNLHRGGGLTSPPTLRQ 438 Query: 340 ---HQDPASVRPFDP 375 ++DPAS+ P P Sbjct: 439 VHPNKDPASILPVIP 453
>P14078:POL_HTL1C Gag-Pro-Pol polyprotein - Human T-cell leukemia virus 1 (isolate| Caribbea HS-35 subtype A) (HTLV-1) Length = 1462 Score = 33.5 bits (75), Expect = 4.8 Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 20/75 (26%) Frame = +1 Query: 211 PCPQSIHPSLAVTSCWTLAP----------------PAPRPHPRILSPTGVIASPPTAH- 339 PCP P+ C L P PA PHP+ L G + SPPT Sbjct: 379 PCPLCQDPTHWKRDCPRLKPTIPEPEPEEDALLLDLPADIPHPKNLHRGGGLTSPPTLQQ 438 Query: 340 ---HQDPASVRPFDP 375 +QDP S+ P P Sbjct: 439 VLPNQDPTSILPVIP 453
>P34205:PHR_CARAU Deoxyribodipyrimidine photo-lyase - Carassius auratus (Goldfish)| Length = 556 Score = 33.5 bits (75), Expect = 4.8 Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 12/209 (5%) Frame = +2 Query: 1175 PGWRNAEKTLEDFVCHGLLDYSKDGMKVAGTTTSLLSPYLHYGEVSVRKIYQLVRMQQIK 1354 PG LE F+ L ++ S LSP++H G++S +++ + V+ ++ Sbjct: 309 PGTSGGMNMLESFIDQRLRLFATHRNNPNYDALSHLSPWIHTGQLSAQRVVKQVKREK-- 366 Query: 1355 CGNEGNSEAGESVNLFLRSIGLREYSRYLCFNFPFTHERSLLGNLKHYPW--RADEDRFK 1528 A ESV F+ + +R R L NF F + S Y W + +D K Sbjct: 367 -------NASESVASFIEELVVR---RELADNFCF-YNPSYDNISGAYDWAKKTLQDHAK 415 Query: 1529 SWRQ----------GMTGYPLVDAGMRELWATGWTHNRIRVIVSSFAVKFLLIPWTWGMK 1678 RQ T L +A R+L + G H +R+ +A K ++ WT + Sbjct: 416 DSRQYLYTKEQLENAKTHDQLWNAAQRQLVSEGKMHGFLRMY---WAKK--ILEWTASPE 470 Query: 1679 YFWDVLLDADIESDILGWQYISGCLPDGH 1765 + L A +D L + GC P+G+ Sbjct: 471 ---EALSIAIYLNDRLS---LDGCDPNGY 493
>Q8TBE0:BAHD1_HUMAN Bromo adjacent homology domain-containing 1 protein - Homo sapiens| (Human) Length = 780 Score = 33.1 bits (74), Expect = 6.3 Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 3/99 (3%) Frame = +1 Query: 79 TSAGP-C*GCPRKRSRAPRPCRAQIVVELTILRTS-PAT-ARDSVGAPCPQSIHPSLAVT 249 T AG C GCP K A CR+ +E + PA+ A +G P P Sbjct: 460 THAGTTCGGCPYKMPFAAEGCRSLGQLEFPLPEAGHPASPAHPLLGCPVPS--------- 510 Query: 250 SCWTLAPPAPRPHPRILSPTGVIASPPTAHHQDPASVRP 366 PPA P P + +PT + P T P S +P Sbjct: 511 -----VPPAAEPVPHLQTPT---SEPQTVARACPQSAKP 541
>O00268:TAF4_HUMAN Transcription initiation factor TFIID subunit 4 - Homo sapiens| (Human) Length = 1085 Score = 32.7 bits (73), Expect = 8.2 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = +1 Query: 163 TILRTSP---ATARDSVGAPCPQSIHPSLAVTSCWTLAPPAPRPHPRILS-PTGVIASPP 330 T+++T P A A + AP P P+ + APP P P P L+ P G A PP Sbjct: 236 TVIQTPPFVGAAAPPAPAAPSP----PAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPP 291 Query: 331 TA 336 TA Sbjct: 292 TA 293
>Q9W1X4:NU214_DROME Nuclear pore complex protein Nup214 - Drosophila melanogaster (Fruit| fly) Length = 1711 Score = 32.7 bits (73), Expect = 8.2 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 15/104 (14%) Frame = +1 Query: 103 CPRKRSRAPRPCRAQIVVE-------LTILRTSPATARD----SVGAPCPQSIHPSLAVT 249 CP++ R ++++++E + PATA +V P P + P+ AV Sbjct: 856 CPQRPDRVG--LKSEVILETKRRAEQIKRAAAKPATANKYTQAAVAPPSPPDVAPTPAVA 913 Query: 250 ----SCWTLAPPAPRPHPRILSPTGVIASPPTAHHQDPASVRPF 369 + T+APP P+P P I S V+ P H PF Sbjct: 914 PMPQATVTVAPPLPKPMPSIPS---VVEKPGVPTHPTTPVATPF 954
>Q7TQM5:KPRP_RAT Keratinocyte proline-rich protein - Rattus norvegicus (Rat)| Length = 699 Score = 32.7 bits (73), Expect = 8.2 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +3 Query: 120 PSPTPMPRADCCRAHDPSHLARHSPRFGWCPVPSIHPSLPRSD 248 P+P P PR + C + +P R PR CP P P PR D Sbjct: 444 PAPRPYPRPEPCPSPEPRPCPRPRPRPEPCPSPEPRPR-PRPD 485
>Q80WJ1:GGN_MOUSE Gametogenetin - Mus musculus (Mouse)| Length = 673 Score = 32.7 bits (73), Expect = 8.2 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +1 Query: 178 SPATARDSVGAPCPQSIHPSLAVTSCWTLAPPAPRPHPRILSPTGVIASPPTAHHQDPAS 357 SP A D V A P ++ + T+ L+PP P+P R G A+ + + Sbjct: 505 SPTAAADQVPAATPATVTSQVPATATAELSPPMPQPKTRTRRNKGPRAARGVIREEGTSG 564 Query: 358 VRPFDPDS 381 P +P++ Sbjct: 565 DGPREPNT 572 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 507,419,400 Number of extensions: 12100646 Number of successful extensions: 36546 Number of sequences better than 10.0: 64 Number of HSP's gapped: 36302 Number of HSP's successfully gapped: 80 Length of query: 903 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 781 Effective length of database: 67,222,449 Effective search space: 52500732669 Effective search space used: 52500732669 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
