ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf72d16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK108306:Os03g0646400 | 248 | 4e-66 | 2 | AK112061:Os07g0458700 | 196 | 1e-50 | 3 | Os08g0167000:Os08g0167000 | 33 | 0.26 | 4 | AK068723:Os12g0112300 | 31 | 0.76 | 5 | AK103025:Os03g0781700 | 30 | 1.3 | 6 | AK103023:Os03g0781700 | 30 | 1.3 | 7 | Os01g0583100:Os01g0583100 | 30 | 1.7 | 8 | Os11g0112900:Os11g0112900 | 29 | 2.9 | 9 | Os07g0297300:Os07g0297300 | 29 | 3.8 | 10 | AK099414:Os07g0142000 | 29 | 3.8 | 11 | AK059877:Os07g0142000 | 29 | 3.8 | 12 | Os08g0484800:Os08g0484800 | 28 | 4.9 | 13 | AK107482:Os11g0630900 | 28 | 4.9 | 14 | AK102096:Os06g0683900 | 28 | 4.9 | 15 | AK101495:Os06g0652600 | 28 | 4.9 | 16 | AK069807:Os03g0726500 | 28 | 4.9 | 17 | AK063970:Os06g0652600 | 28 | 4.9 | 18 | AK063941:Os06g0683900 | 28 | 4.9 | 19 | Os03g0421500:Os03g0421500 | 28 | 6.4 | 20 | Os12g0215900:Os12g0215900 | 28 | 8.4 | 21 | Os08g0400200:Os08g0400200 | 28 | 8.4 | 22 | AK072397:Os03g0273200 | 28 | 8.4 | 23 | AK066049:Os03g0755100 | 28 | 8.4 | 24 | AK060579:Os03g0273200 | 28 | 8.4 |
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>AK108306:Os03g0646400 | Length = 166 Score = 248 bits (632), Expect = 4e-66 Identities = 121/158 (76%), Positives = 132/158 (83%) Frame = +2 Query: 98 MGAVSATADVVVALFSLIMAVAAPLFDSQVVLPRGLHPAPLVDIHRWFTVAFGHYLVADP 277 MG V+A AD VVAL SL MAVAAPLFD+QVVLPRGL+PAPLV IHRWF FGHYLVADP Sbjct: 1 MGFVTAAADAVVALLSLTMAVAAPLFDAQVVLPRGLYPAPLVGIHRWFAAEFGHYLVADP 60 Query: 278 PPFFLGFVWLDLAFLWPVCVANLYGILAGRRWSATTSLMAGVYMLTYLSAILGDMLGSGK 457 PPFF G VWLDLAFLWPVCVANLYGILA R WSA TS+MAGVY+LTY+SAI G+MLGSG+ Sbjct: 61 PPFFRGLVWLDLAFLWPVCVANLYGILARRPWSAATSIMAGVYVLTYMSAIFGEMLGSGR 120 Query: 458 ATPRLLQLYAPFIVIAVTAVLRGLCSYSAPLTAATSVA 571 TP+L+QLY PF + AVTAVLRG CS SA TA S A Sbjct: 121 TTPKLIQLYVPFALAAVTAVLRGFCSCSAQATAVASHA 158
>AK112061:Os07g0458700 | Length = 166 Score = 196 bits (498), Expect = 1e-50 Identities = 100/157 (63%), Positives = 119/157 (75%) Frame = +2 Query: 98 MGAVSATADVVVALFSLIMAVAAPLFDSQVVLPRGLHPAPLVDIHRWFTVAFGHYLVADP 277 MG VSA AD V LFSL +AVAAPL D+Q VLPR L PAPLV + RW+ FG YLVA P Sbjct: 1 MGVVSAAADAAVVLFSLTVAVAAPLIDAQSVLPRHLFPAPLVSLKRWYAREFGDYLVARP 60 Query: 278 PPFFLGFVWLDLAFLWPVCVANLYGILAGRRWSATTSLMAGVYMLTYLSAILGDMLGSGK 457 P F G VWL+LAFLWP+ +A LYGILA RRW+ATTSL+AGV LT +SAILG+++GS K Sbjct: 61 PGFLRGLVWLELAFLWPLALATLYGILARRRWAATTSLIAGVSTLTSMSAILGEIVGSKK 120 Query: 458 ATPRLLQLYAPFIVIAVTAVLRGLCSYSAPLTAATSV 568 AT +LLQ+Y PF V AV A+LRGLCS + TA +S+ Sbjct: 121 ATLKLLQMYVPFAVFAVIAILRGLCSSAPRGTAGSSL 157
>Os08g0167000:Os08g0167000 | Length = 757 Score = 32.7 bits (73), Expect = 0.26 Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 22/134 (16%) Frame = +2 Query: 29 KQQQSGPPQLRSAPSGRTLAPQPMGAVSATADVVVA-------------LFSLIMAVAAP 169 K++ SG +L S + RT A PM TA VV+ L SL++ + + Sbjct: 571 KERSSGMYRLSSYFAARTAADLPMELALPTAFVVILYWMGGLDPRPGPFLLSLLVVLYSV 630 Query: 170 LFDSQVVLPRGLHPAPLVDIHRWFTVAF---------GHYLVADPPPFFLGFVWLDLAFL 322 L + L G A L+D+ + T+A G Y V PPF WL+ +F Sbjct: 631 LVAQSLGLAIG---AVLMDVKQGTTLASVITMVFLIAGGYYVQHIPPFVGWLRWLNYSF- 686 Query: 323 WPVCVANLYGILAG 364 C L GI G Sbjct: 687 --YCYRLLIGIQFG 698
>AK068723:Os12g0112300 | Length = 499 Score = 31.2 bits (69), Expect = 0.76 Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 40/185 (21%) Frame = +2 Query: 101 GAVSATADVVVALFS---LIMAVAAPLFDSQVVLPRGLHPAPLVDIHRWFTVAFGHYLV- 268 GA+S + LF+ L+ VAAP+ LP P LV IHR+F+++ + V Sbjct: 54 GAISLGLSSLPGLFAGSLLLTLVAAPVASLAFSLPSIPKPRALVFIHRFFSLSLLVFFVL 113 Query: 269 -------------------ADPPPFFLGFVWLDL-----AFLWPVCVANLYGILAGRRWS 376 ++ PP + W + FLW V + NL I W+ Sbjct: 114 WFASTPGHSPSISQSSEDASNKPPGWGNHSWFYILVRISLFLW-VSLLNLIAI--SSTWA 170 Query: 377 ATTSLM---AGVYMLTYL--SAILGDMLGSGKATPRLLQLYAPFIVIAVTAVL------- 520 +M +G + ++ A LG + GS A + L PF+++ + ++ Sbjct: 171 RVIDIMDSESGSRLFGFIGAGATLGQLFGSLFAA--TMALLGPFLLLFSSLLMELAALSS 228 Query: 521 RGLCS 535 +G+C+ Sbjct: 229 KGICT 233
>AK103025:Os03g0781700 | Length = 247 Score = 30.4 bits (67), Expect = 1.3 Identities = 21/77 (27%), Positives = 33/77 (42%) Frame = +2 Query: 170 LFDSQVVLPRGLHPAPLVDIHRWFTVAFGHYLVADPPPFFLGFVWLDLAFLWPVCVANLY 349 LF Q + R L D+ W ++A ++ F WLD FL V A + Sbjct: 45 LFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVL 104 Query: 350 GILAGRRWSATTSLMAG 400 G++ WS +S ++G Sbjct: 105 GMVVQFVWSNFSSALSG 121
>AK103023:Os03g0781700 | Length = 247 Score = 30.4 bits (67), Expect = 1.3 Identities = 21/77 (27%), Positives = 33/77 (42%) Frame = +2 Query: 170 LFDSQVVLPRGLHPAPLVDIHRWFTVAFGHYLVADPPPFFLGFVWLDLAFLWPVCVANLY 349 LF Q + R L D+ W ++A ++ F WLD FL V A + Sbjct: 45 LFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVL 104 Query: 350 GILAGRRWSATTSLMAG 400 G++ WS +S ++G Sbjct: 105 GMVVQFVWSNFSSALSG 121
>Os01g0583100:Os01g0583100 | Length = 467 Score = 30.0 bits (66), Expect = 1.7 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +2 Query: 62 SAPSGRTLAPQPMGAVSATADVVVALFSLIMAVAAPLFDSQVVLPRGLHPAPLVDIHR 235 +A G +AP+ +G+ + VVA+ + A DS+ VL RG P PL H+ Sbjct: 267 NASRGEAVAPETVGSTA-----VVAVICSSHIIVANCGDSRAVLCRGKQPVPLSVDHK 319
>Os11g0112900:Os11g0112900 | Length = 322 Score = 29.3 bits (64), Expect = 2.9 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +2 Query: 101 GAVSATADVVVALFS---LIMAVAAPLFDSQVVLPRGLHPAPLVDIHRWFTVA 250 GA+S + LF+ L+ VAAP+ LP P LV IHR+F+++ Sbjct: 54 GAISLGLSTLPGLFAGSLLLTLVAAPVASLAFSLPSIPKPRALVFIHRFFSLS 106
>Os07g0297300:Os07g0297300 | Length = 600 Score = 28.9 bits (63), Expect = 3.8 Identities = 23/77 (29%), Positives = 28/77 (36%) Frame = -3 Query: 279 GGSATR*WPNATVNHRWMSTSGAGWRPRGSTTWESNSGAATAMIXXXXXXXXXXXXXXAP 100 GG + W A V RW + A GS E GAA AM+ + Sbjct: 16 GGGERQQWEAAAVGMRWRGAAAA--MGVGSGGGERRWGAAMAMMVGSGGGGDVAKGSGSS 73 Query: 99 IGCGASVRPEGADRSCG 49 GCG R G+ CG Sbjct: 74 CGCGER-RRSGSSGDCG 89
>AK099414:Os07g0142000 | Length = 246 Score = 28.9 bits (63), Expect = 3.8 Identities = 19/80 (23%), Positives = 30/80 (37%) Frame = +2 Query: 161 AAPLFDSQVVLPRGLHPAPLVDIHRWFTVAFGHYLVADPPPFFLGFVWLDLAFLWPVCVA 340 A LF Q + L D+ W ++A ++ F WLD FL C Sbjct: 41 AKRLFGGQKSVHHVLGGGKSADVLLWRNKKISSSVLAVATAVWVFFEWLDYHFLTIACFV 100 Query: 341 NLYGILAGRRWSATTSLMAG 400 + G++ WS ++ G Sbjct: 101 LVLGMVVQFAWSTFAGMLNG 120
>AK059877:Os07g0142000 | Length = 246 Score = 28.9 bits (63), Expect = 3.8 Identities = 19/80 (23%), Positives = 30/80 (37%) Frame = +2 Query: 161 AAPLFDSQVVLPRGLHPAPLVDIHRWFTVAFGHYLVADPPPFFLGFVWLDLAFLWPVCVA 340 A LF Q + L D+ W ++A ++ F WLD FL C Sbjct: 41 AKRLFGGQKSVHHVLGGGKSADVLLWRNKKISSSVLAVATAVWVFFEWLDYHFLTIACFV 100 Query: 341 NLYGILAGRRWSATTSLMAG 400 + G++ WS ++ G Sbjct: 101 LVLGMVVQFAWSTFAGMLNG 120
>Os08g0484800:Os08g0484800 | Length = 352 Score = 28.5 bits (62), Expect = 4.9 Identities = 21/71 (29%), Positives = 32/71 (45%) Frame = +2 Query: 5 APLFLF*RKQQQSGPPQLRSAPSGRTLAPQPMGAVSATADVVVALFSLIMAVAAPLFDSQ 184 +P L R + PP LR++ SGR A S+ D +++ L + +A P S Sbjct: 74 SPSPLLSRAPSRRWPPPLRASASGRGGASAAAAPTSSALDALLSAAEL-LCLAPPAICSV 132 Query: 185 VVLPRGLHPAP 217 V R + P P Sbjct: 133 VCAARLVFPPP 143
>AK107482:Os11g0630900 | Length = 225 Score = 28.5 bits (62), Expect = 4.9 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -3 Query: 390 REVVADQRRPARMP*RLATQTGHRKARSSQTKPRKKGGGSA 268 R+V A +RR R P R HR R + PR+ G G A Sbjct: 141 RQVGAPRRRRLRRPVRRHRHGRHRAPRRAGVPPRRAGAGLA 181
>AK102096:Os06g0683900 | Length = 431 Score = 28.5 bits (62), Expect = 4.9 Identities = 19/64 (29%), Positives = 30/64 (46%) Frame = -3 Query: 345 RLATQTGHRKARSSQTKPRKKGGGSATR*WPNATVNHRWMSTSGAGWRPRGSTTWESNSG 166 R T KARS +PR++ G AT + R + +P+G+++ +S S Sbjct: 246 RQGTAASRAKARSPSPRPRRQSNGKAT--------DTRGGNKVVDELKPKGASSSQSGSA 297 Query: 165 AATA 154 AA A Sbjct: 298 AAAA 301
>AK101495:Os06g0652600 | Length = 518 Score = 28.5 bits (62), Expect = 4.9 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -3 Query: 336 TQTGHRKARSSQTKPRKKGGGSATR*WPNATVNHRWMSTSGAGWRPRGSTTWESNSGAAT 157 + +G A S + G GS++ W + MS A S+T ESNSG+AT Sbjct: 343 SSSGSVSASGSGSSNSGAGSGSSSSSWSGSNSGSGTMSGIDAPSSTGTSSTAESNSGSAT 402 Query: 156 AM 151 ++ Sbjct: 403 SV 404
>AK069807:Os03g0726500 | Length = 475 Score = 28.5 bits (62), Expect = 4.9 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +2 Query: 299 VWLDLAFLWPVCVANLYGILAGRRWSATTSLMAGVYMLTYLSAILG 436 VW DLAF W V VA + G L G + + G + L+ ++G Sbjct: 61 VWPDLAFNWRVVVATVVGFL-GSAFGTVGGVGGGGIFVPMLNLLVG 105
>AK063970:Os06g0652600 | Length = 359 Score = 28.5 bits (62), Expect = 4.9 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -3 Query: 336 TQTGHRKARSSQTKPRKKGGGSATR*WPNATVNHRWMSTSGAGWRPRGSTTWESNSGAAT 157 + +G A S + G GS++ W + MS A S+T ESNSG+AT Sbjct: 184 SSSGSVSASGSGSSNSGAGSGSSSSSWSGSNSGSGTMSGIDAPSSTGTSSTAESNSGSAT 243 Query: 156 AM 151 ++ Sbjct: 244 SV 245
>AK063941:Os06g0683900 | Length = 431 Score = 28.5 bits (62), Expect = 4.9 Identities = 19/64 (29%), Positives = 30/64 (46%) Frame = -3 Query: 345 RLATQTGHRKARSSQTKPRKKGGGSATR*WPNATVNHRWMSTSGAGWRPRGSTTWESNSG 166 R T KARS +PR++ G AT + R + +P+G+++ +S S Sbjct: 246 RQGTAASRAKARSPSPRPRRQSNGKAT--------DTRGGNKVVDELKPKGASSSQSGSA 297 Query: 165 AATA 154 AA A Sbjct: 298 AAAA 301
>Os03g0421500:Os03g0421500 | Length = 292 Score = 28.1 bits (61), Expect = 6.4 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = -3 Query: 216 GAGWRPRGSTTWESNS 169 G GWRPRG WE S Sbjct: 17 GGGWRPRGVCCWERES 32
>Os12g0215900:Os12g0215900 | Length = 1617 Score = 27.7 bits (60), Expect = 8.4 Identities = 17/57 (29%), Positives = 23/57 (40%) Frame = -3 Query: 330 TGHRKARSSQTKPRKKGGGSATR*WPNATVNHRWMSTSGAGWRPRGSTTWESNSGAA 160 TG R+A + +GGG ATR + A WR G+T W + A Sbjct: 1527 TGRRRATRDRHGRGARGGGHATR------------GDATAAWRRDGATGWRRDGDGA 1571
>Os08g0400200:Os08g0400200 | Length = 1292 Score = 27.7 bits (60), Expect = 8.4 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -3 Query: 390 REVVADQRRPARMP*RLATQTGHRKARSSQTKPRKKGGG 274 REVVA R + LAT G R A K ++ GGG Sbjct: 191 REVVAPARNAVAVAGDLATHGGERVAGPLVAKEKRNGGG 229
>AK072397:Os03g0273200 | Length = 578 Score = 27.7 bits (60), Expect = 8.4 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +2 Query: 170 LFDSQVVLPRGLHPAPLVDIHRWFTVAFGHYLVADP 277 L+ ++LP+ P P + H+ + FG + ADP Sbjct: 142 LYGPIIILPKAGLPLPFTEPHKDVPIIFGEWFNADP 177
>AK066049:Os03g0755100 | Length = 641 Score = 27.7 bits (60), Expect = 8.4 Identities = 23/68 (33%), Positives = 31/68 (45%) Frame = +2 Query: 374 SATTSLMAGVYMLTYLSAILGDMLGSGKATPRLLQLYAPFIVIAVTAVLRGLCSYSAPLT 553 +ATT+L + +T S LG M + L + P I IAV R L S Sbjct: 174 AATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAVRKFGRFLRELSHQTQ 233 Query: 554 AATSVASA 577 AA +VAS+ Sbjct: 234 AAAAVASS 241
>AK060579:Os03g0273200 | Length = 578 Score = 27.7 bits (60), Expect = 8.4 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +2 Query: 170 LFDSQVVLPRGLHPAPLVDIHRWFTVAFGHYLVADP 277 L+ ++LP+ P P + H+ + FG + ADP Sbjct: 142 LYGPIIILPKAGLPLPFTEPHKDVPIIFGEWFNADP 177 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,871,244 Number of extensions: 335841 Number of successful extensions: 1127 Number of sequences better than 10.0: 24 Number of HSP's gapped: 1123 Number of HSP's successfully gapped: 24 Length of query: 244 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 146 Effective length of database: 11,475,837 Effective search space: 1675472202 Effective search space used: 1675472202 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
