ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf72c21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062057.1| Oryza sativa (japonica cultivar-group) Os05g0408200 (Os05g0408200) mRNA, complete cds Length = 2916 Score = 620 bits (313), Expect = e-174 Identities = 663/782 (84%) Strand = Plus / Plus Query: 1181 aaacaggaaaatgcgaaacttaccaattccccagtgcatgacagcaagagtgcttattca 1240 ||||||||||| | |||||||||||||| || |||||||||| |||||| |||| ||| Sbjct: 1246 aaacaggaaaacaccaaacttaccaattctcctgtgcatgacacaaagagtacttactca 1305 Query: 1241 tcctcatgccccacaggacgcatttcgttcaagttgtacgactggaatcccgcggagttt 1300 ||||| || ||||||||||| | || |||||||||||||| |||||||| || || ||| Sbjct: 1306 tcctcgtgtcccacaggacgtgtatcattcaagttgtacgattggaatcctgctgaattt 1365 Query: 1301 cctcggcgtctacgtaaccaaatatttgagtggttgtctagcatgcctgttgaattggag 1360 ||||| || |||| ||||||||||||||||| | |||||||||||||||||| ||||| Sbjct: 1366 cctcgacgcttacgccaccaaatatttgagtggctttctagcatgcctgttgaactggag 1425 Query: 1361 ggctacattcgtcctggctgcacaattttaactgtatttattgcaatgccacaacatatg 1420 ||||| ||||||||||| || |||||||||||||||||| |||||||||||||||||||| Sbjct: 1426 ggctatattcgtcctggttgtacaattttaactgtatttgttgcaatgccacaacatatg 1485 Query: 1421 tgggacaagttatcagaagatacagcaaatcttgtcaggaacttggtaaatgctccgagc 1480 |||||||||||||| ||||| |||| ||||||||||| | ||||||||||||||| | Sbjct: 1486 tgggacaagttatccgaagacacaggaaatcttgtcaaaagcttggtaaatgctccaaat 1545 Query: 1481 agtcttctattggataaaggggccttttttgttcatgtcaataacacaatatttcaagta 1540 ||||| || |||| |||||||||||| ||| | ||||||||||| | |||||||||||| Sbjct: 1546 agtctcctgttgggtaaaggggccttctttatccatgtcaataatatgatatttcaagta 1605 Query: 1541 ttcaaagatggagcaacattgatgagtaccagattagaggtacaagccccaaggatccat 1600 || |||||||| |||||||||| |||||||||||||||||||| |||| ||||| || Sbjct: 1606 ttgaaagatggtgcaacattgaccagtaccagattagaggtacagtccccgaggattcac 1665 Query: 1601 tgtgttcatccaacatggtttgaagcaggaaagcctattgaactcctcctttgtggaagt 1660 | |||||||||| |||||||||||||||||||||| || || || | |||||||||||| Sbjct: 1666 tatgttcatccatcatggtttgaagcaggaaagcccatcgatcttattctttgtggaagt 1725 Query: 1661 tctcttgatcagcctaaattcagatcacttctttcgtttgatggagagtacttgaagcat 1720 ||||||||||||||||||||||| |||||| | || ||||||||| ||||||||||||| Sbjct: 1726 tctcttgatcagcctaaattcaggtcacttgtgtcatttgatggactgtacttgaagcat 1785 Query: 1721 gattgttgccgtctaacgtcttatgaaacctttggtcgcatgaaaagtggtgatcctaca 1780 |||||| ||||| || ||| |||| ||||||| | | || |||||| || | || | Sbjct: 1786 gattgtcgccgtatactgtcacatgagacctttgattgtattggaagtggggaacatata 1845 Query: 1781 tttgattctcaacaggaagttttccggataaacatcactcnnnnnnngctggatactcat 1840 ||||||||||||| ||| | ||||||||||| || || ||||||||||||| Sbjct: 1846 cttgattctcaacatgaaatattccggataaatattaccacatcaaagctggatactcat 1905 Query: 1841 ggacctggttttgtagaagtggaaaacgtgtttgggctatcaaattttgtccctatcctt 1900 ||||| | ||||| |||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 1906 ggacccgcatttgtggaagtggaaaacatgtttgggctatcaaattttgttcctatcctt 1965 Query: 1901 ttcggtagcaaacagttatgttttgaactagagaggatacaagatgctctttgtggttct 1960 | |||||||| || ||||||| |||||||||| |||||| |||||||| ||||||||| Sbjct: 1966 gttggtagcaagcatttatgttctgaactagagcagatacatgatgctctgtgtggttct 2025 Query: 1961 tc 1962 || Sbjct: 2026 tc 2027 Score = 385 bits (194), Expect = e-103 Identities = 419/494 (84%) Strand = Plus / Plus Query: 683 atgaggtgccaagtgccgggctgtgaggcggatatacgggagctgaaagggtaccacaag 742 |||| |||||| ||||| || ||||||||||| ||||| |||||||| || |||||| Sbjct: 739 atgaagtgccaggtgcctggttgtgaggcggacatacgtgagctgaagggataccaccgc 798 Query: 743 cggcaccgggtgtgtctgcgttgcgcgcacgcgtctgccgtcatgctcgatggcgtccag 802 |||||| |||||||| |||| ||||||||||| | || |||||||| ||||| |||||| Sbjct: 799 cggcacagggtgtgtttgcgctgcgcgcacgccgccgctgtcatgcttgatggtgtccag 858 Query: 803 aagcgctactgccagcagtgcggcaaattccatatattattagattttgatgaagacaaa 862 |||||||| ||||||||||| ||||| || ||||||||| ||||||| |||||||| ||| Sbjct: 859 aagcgctattgccagcagtgtggcaagtttcatatattactagatttcgatgaagataaa 918 Query: 863 aggagttgtagaagaaagctggagaggcacaacaaaagaagaagaaggaaacctgattcg 922 |||||||||||||| || ||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 919 aggagttgtagaaggaaattggagcggcacaacaaaagaagacgaagaaaacctgattcc 978 Query: 923 aagggcacattggagaaagagatagatgaacaattggatttgtcagctgatggtagcggt 982 || |||| |||||||||||| |||||||| || |||||||| ||||| |||||||| ||| Sbjct: 979 aaaggcatattggagaaagatatagatgaccagttggatttttcagcagatggtagtggt 1038 Query: 983 ggcggtgaactaagagaagagaatatagatggcgtcacccgtgacatgcttgagactgtt 1042 | |||||||||||||||||||| ||||||| | ||| |||| | ||||||||||||| Sbjct: 1039 gatggtgaactaagagaagagaacatagatgtcactaccagtgagacgcttgagactgtt 1098 Query: 1043 cttagcaacaaagttttagacagagcaacaccggtgggatctgaagatgccgttagttct 1102 || ||||| || ||||| ||||| | |||||| ||||| || || |||| |||||||| Sbjct: 1099 ctgagcaataaggttttggacagggaaacacctgtgggttccgatgatgtgcttagttct 1158 Query: 1103 ccaacttgtacacaactcagcttgcaaaatgaccaaagtaaaagcatagtgacttttgca 1162 ||||| ||| |||||| ||| ||||||| ||||||||||||||| |||||||||| || Sbjct: 1159 ccaacatgtgcacaacccagtttgcaaatcgaccaaagtaaaagcttagtgactttcgct 1218 Query: 1163 gcttctgatgaagc 1176 ||||||| |||||| Sbjct: 1219 gcttctgttgaagc 1232 Score = 155 bits (78), Expect = 1e-33 Identities = 258/318 (81%) Strand = Plus / Plus Query: 2009 ccttgcgagctttgggaacttcaacaaactgcaatgtcgggatttctgatagagattggg 2068 ||||| |||||| | | ||||| ||| |||||||||| |||||| || || || ||||| Sbjct: 2044 ccttgtgagcttcgaggacttcgacagactgcaatgttgggattcctcatcgacattgga 2103 Query: 2069 tggttattaaagaagccctctccagatgaatttaaaaatttactaagtaaaacaaatatc 2128 ||| || ||| |||||| || |||||||||| |||| |||| ||| | |||||||| Sbjct: 2104 tggctaataaggaagccatccatagatgaatttcaaaacctactgagtttagcaaatatc 2163 Query: 2129 aagagatggatatgtgtgttgaagttcttgatacagaacaattttattaatgttcttgaa 2188 ||||||||||||| || |||| ||| ||||||||||| ||||||| |||||||| ||| Sbjct: 2164 cagagatggatatgcatgatgaaattcctgatacagaacgattttatcaatgttctggaa 2223 Query: 2189 atgattttgatgtcatcggacaacatcataggctctgaggttctttctaacctagaaaag 2248 || || ||| || | ||||||||||||||| || ||| ||||||||||| | |||||| Sbjct: 2224 ataatagtgaactcgttggacaacatcatagggtcagagcttctttctaacttggaaaag 2283 Query: 2249 gggcgattggaacatcatgtcacagcattccttggatatataagacatgctcgaaacatt 2308 || || ||||| ||||||| |||| ||| ||||| ||| |||| | |||||||||||| Sbjct: 2284 ggtagactggaaaatcatgtaacagaatttcttgggtatgtaagcgaagctcgaaacatt 2343 Query: 2309 gttgataatagagctaaa 2326 |||||||||||| ||||| Sbjct: 2344 gttgataatagacctaaa 2361 Score = 105 bits (53), Expect = 9e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 449 aagcgcgacccgcggctggtgtgccctaactacctcgcggggattgtgccctgtgcgtgc 508 |||||||||||||||||||| ||||| ||||||||||| |||| ||||| || |||||| Sbjct: 523 aagcgcgacccgcggctggtttgcccgaactacctcgccgggagggtgccgtgcgcgtgc 582 Query: 509 cccgagttggatgagatggcggccgccgcggaggtcgagga 549 |||||| | || ||||||||||||||| |||||||||||| Sbjct: 583 cccgagattgacgagatggcggccgccttggaggtcgagga 623 Score = 83.8 bits (42), Expect = 3e-12 Identities = 114/138 (82%) Strand = Plus / Plus Query: 2574 cttttccaggtggtgctatgagaatgcgactcatcacgactgtggcagtggctgctgtat 2633 |||||||||||||||| ||||||||||| || ||| ||||||| | | | |||||| Sbjct: 2606 cttttccaggtggtgccatgagaatgcgtcttgccaccactgtggtaattggtgctgtgg 2665 Query: 2634 tgtgtttcacggcctgtgttgccgtgttccacccagatagagtaggggtgcttgcagctc 2693 | ||||| | || ||||||| | | ||||||||| | ||||||||||||||||| || | Sbjct: 2666 tatgttttgcagcttgtgttgtccttttccacccacacagagtaggggtgcttgccgcgc 2725 Query: 2694 cagtaaagaggtacttgt 2711 |||||||||||||||||| Sbjct: 2726 cagtaaagaggtacttgt 2743 Score = 67.9 bits (34), Expect = 2e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 239 cccgtctgggactgggacaacctcctcgacttcgccatcccggatgacgattccctgctc 298 |||||||||||||||| |||||||||||||||||| ||| || ||||| || ||| || Sbjct: 298 cccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtc 357 Query: 299 ctcccgtggg 308 |||||||||| Sbjct: 358 ctcccgtggg 367
>dbj|AK100057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158B16, full insert sequence Length = 2917 Score = 613 bits (309), Expect = e-171 Identities = 662/782 (84%) Strand = Plus / Plus Query: 1181 aaacaggaaaatgcgaaacttaccaattccccagtgcatgacagcaagagtgcttattca 1240 ||||||||||| | |||||||||||||| || |||||||||| |||||| |||| ||| Sbjct: 1247 aaacaggaaaacaccaaacttaccaattctcctgtgcatgacacaaagagtacttactca 1306 Query: 1241 tcctcatgccccacaggacgcatttcgttcaagttgtacgactggaatcccgcggagttt 1300 ||||| || ||||||||||| | || |||||||||||||| |||||||| || || ||| Sbjct: 1307 tcctcgtgtcccacaggacgtgtatcattcaagttgtacgattggaatcctgctgaattt 1366 Query: 1301 cctcggcgtctacgtaaccaaatatttgagtggttgtctagcatgcctgttgaattggag 1360 ||||| || |||| ||||||||||||||||| | |||||||||||||||||| ||||| Sbjct: 1367 cctcgacgcttacgccaccaaatatttgagtggctttctagcatgcctgttgaactggag 1426 Query: 1361 ggctacattcgtcctggctgcacaattttaactgtatttattgcaatgccacaacatatg 1420 ||||| ||||||||||| || |||||||||||||||||| |||||||||||||||||||| Sbjct: 1427 ggctatattcgtcctggttgtacaattttaactgtatttgttgcaatgccacaacatatg 1486 Query: 1421 tgggacaagttatcagaagatacagcaaatcttgtcaggaacttggtaaatgctccgagc 1480 |||||||||||||| ||||| |||| ||||||||||| | ||||||||||||||| | Sbjct: 1487 tgggacaagttatccgaagacacaggaaatcttgtcaaaagcttggtaaatgctccaaat 1546 Query: 1481 agtcttctattggataaaggggccttttttgttcatgtcaataacacaatatttcaagta 1540 ||||| || |||| |||||||||||| ||| | ||||||||||| | |||||||||||| Sbjct: 1547 agtctcctgttgggtaaaggggccttctttatccatgtcaataatatgatatttcaagta 1606 Query: 1541 ttcaaagatggagcaacattgatgagtaccagattagaggtacaagccccaaggatccat 1600 || |||||||| |||||||||| |||||||||||||||||||| |||| ||||| || Sbjct: 1607 ttgaaagatggtgcaacattgaccagtaccagattagaggtacagtccccgaggattcac 1666 Query: 1601 tgtgttcatccaacatggtttgaagcaggaaagcctattgaactcctcctttgtggaagt 1660 | |||||||||| |||||||||||||||||||||| || || || | |||||||||||| Sbjct: 1667 tatgttcatccatcatggtttgaagcaggaaagcccatcgatcttattctttgtggaagt 1726 Query: 1661 tctcttgatcagcctaaattcagatcacttctttcgtttgatggagagtacttgaagcat 1720 ||||||||||||||||||||||| |||||| | || |||||||| ||||||||||||| Sbjct: 1727 tctcttgatcagcctaaattcaggtcacttgtgtcatttgatgggctgtacttgaagcat 1786 Query: 1721 gattgttgccgtctaacgtcttatgaaacctttggtcgcatgaaaagtggtgatcctaca 1780 |||||| ||||| || ||| |||| ||||||| | | || |||||| || | || | Sbjct: 1787 gattgtcgccgtatactgtcacatgagacctttgattgtattggaagtggggaacatata 1846 Query: 1781 tttgattctcaacaggaagttttccggataaacatcactcnnnnnnngctggatactcat 1840 ||||||||||||| ||| | ||||||||||| || || ||||||||||||| Sbjct: 1847 cttgattctcaacatgaaatattccggataaatattaccacatcaaagctggatactcat 1906 Query: 1841 ggacctggttttgtagaagtggaaaacgtgtttgggctatcaaattttgtccctatcctt 1900 ||||| | ||||| |||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 1907 ggacccgcatttgtggaagtggaaaacatgtttgggctatcaaattttgttcctatcctt 1966 Query: 1901 ttcggtagcaaacagttatgttttgaactagagaggatacaagatgctctttgtggttct 1960 | |||||||| || ||||||| |||||||||| |||||| |||||||| ||||||||| Sbjct: 1967 gttggtagcaagcatttatgttctgaactagagcagatacatgatgctctgtgtggttct 2026 Query: 1961 tc 1962 || Sbjct: 2027 tc 2028 Score = 385 bits (194), Expect = e-103 Identities = 419/494 (84%) Strand = Plus / Plus Query: 683 atgaggtgccaagtgccgggctgtgaggcggatatacgggagctgaaagggtaccacaag 742 |||| |||||| ||||| || ||||||||||| ||||| |||||||| || |||||| Sbjct: 740 atgaagtgccaggtgcctggttgtgaggcggacatacgtgagctgaagggataccaccgc 799 Query: 743 cggcaccgggtgtgtctgcgttgcgcgcacgcgtctgccgtcatgctcgatggcgtccag 802 |||||| |||||||| |||| ||||||||||| | || |||||||| ||||| |||||| Sbjct: 800 cggcacagggtgtgtttgcgctgcgcgcacgccgccgctgtcatgcttgatggtgtccag 859 Query: 803 aagcgctactgccagcagtgcggcaaattccatatattattagattttgatgaagacaaa 862 |||||||| ||||||||||| ||||| || ||||||||| ||||||| |||||||| ||| Sbjct: 860 aagcgctattgccagcagtgtggcaagtttcatatattactagatttcgatgaagataaa 919 Query: 863 aggagttgtagaagaaagctggagaggcacaacaaaagaagaagaaggaaacctgattcg 922 |||||||||||||| || ||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 920 aggagttgtagaaggaaattggagcggcacaacaaaagaagacgaagaaaacctgattcc 979 Query: 923 aagggcacattggagaaagagatagatgaacaattggatttgtcagctgatggtagcggt 982 || |||| |||||||||||| |||||||| || |||||||| ||||| |||||||| ||| Sbjct: 980 aaaggcatattggagaaagatatagatgaccagttggatttttcagcagatggtagtggt 1039 Query: 983 ggcggtgaactaagagaagagaatatagatggcgtcacccgtgacatgcttgagactgtt 1042 | |||||||||||||||||||| ||||||| | ||| |||| | ||||||||||||| Sbjct: 1040 gatggtgaactaagagaagagaacatagatgtcactaccagtgagacgcttgagactgtt 1099 Query: 1043 cttagcaacaaagttttagacagagcaacaccggtgggatctgaagatgccgttagttct 1102 || ||||| || ||||| ||||| | |||||| ||||| || || |||| |||||||| Sbjct: 1100 ctgagcaataaggttttggacagggaaacacctgtgggttccgatgatgtgcttagttct 1159 Query: 1103 ccaacttgtacacaactcagcttgcaaaatgaccaaagtaaaagcatagtgacttttgca 1162 ||||| ||| |||||| ||| ||||||| ||||||||||||||| |||||||||| || Sbjct: 1160 ccaacatgtgcacaacccagtttgcaaatcgaccaaagtaaaagcttagtgactttcgct 1219 Query: 1163 gcttctgatgaagc 1176 ||||||| |||||| Sbjct: 1220 gcttctgttgaagc 1233 Score = 147 bits (74), Expect = 3e-31 Identities = 257/318 (80%) Strand = Plus / Plus Query: 2009 ccttgcgagctttgggaacttcaacaaactgcaatgtcgggatttctgatagagattggg 2068 ||||| |||||| | | ||||| ||| |||||||||| |||||| || || || ||||| Sbjct: 2045 ccttgtgagcttcgaggacttcgacagactgcaatgttgggattcctcatcgacattgga 2104 Query: 2069 tggttattaaagaagccctctccagatgaatttaaaaatttactaagtaaaacaaatatc 2128 ||| || ||| |||||| || |||||||||| |||| |||| ||| | |||||||| Sbjct: 2105 tggctaataaggaagccatccatagatgaatttcaaaacctactgagtttagcaaatatc 2164 Query: 2129 aagagatggatatgtgtgttgaagttcttgatacagaacaattttattaatgttcttgaa 2188 ||||||||||||| || |||| ||| ||||||||||| ||||||| |||||||| ||| Sbjct: 2165 cagagatggatatgcatgatgaaattcctgatacagaacgattttatcaatgttctggaa 2224 Query: 2189 atgattttgatgtcatcggacaacatcataggctctgaggttctttctaacctagaaaag 2248 || || ||| || | ||||||||||||||| || ||| ||||||||||| | |||||| Sbjct: 2225 ataatagtgaactcgttggacaacatcatagggtcagagcttctttctaacttggaaaag 2284 Query: 2249 gggcgattggaacatcatgtcacagcattccttggatatataagacatgctcgaaacatt 2308 || || ||||| ||||||| |||| ||| ||||| ||| ||| | |||||||||||| Sbjct: 2285 ggtagactggaaaatcatgtaacagaatttcttgggtatgcaagcgaagctcgaaacatt 2344 Query: 2309 gttgataatagagctaaa 2326 |||||||||||| ||||| Sbjct: 2345 gttgataatagacctaaa 2362 Score = 105 bits (53), Expect = 9e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 449 aagcgcgacccgcggctggtgtgccctaactacctcgcggggattgtgccctgtgcgtgc 508 |||||||||||||||||||| ||||| ||||||||||| |||| ||||| || |||||| Sbjct: 524 aagcgcgacccgcggctggtttgcccgaactacctcgccgggagggtgccgtgcgcgtgc 583 Query: 509 cccgagttggatgagatggcggccgccgcggaggtcgagga 549 |||||| | || ||||||||||||||| |||||||||||| Sbjct: 584 cccgagattgacgagatggcggccgccttggaggtcgagga 624 Score = 83.8 bits (42), Expect = 3e-12 Identities = 114/138 (82%) Strand = Plus / Plus Query: 2574 cttttccaggtggtgctatgagaatgcgactcatcacgactgtggcagtggctgctgtat 2633 |||||||||||||||| ||||||||||| || ||| ||||||| | | | |||||| Sbjct: 2607 cttttccaggtggtgccatgagaatgcgtcttgccaccactgtggtaattggtgctgtgg 2666 Query: 2634 tgtgtttcacggcctgtgttgccgtgttccacccagatagagtaggggtgcttgcagctc 2693 | ||||| | || ||||||| | | ||||||||| | ||||||||||||||||| || | Sbjct: 2667 tatgttttgcagcttgtgttgtccttttccacccacacagagtaggggtgcttgccgcgc 2726 Query: 2694 cagtaaagaggtacttgt 2711 |||||||||||||||||| Sbjct: 2727 cagtaaagaggtacttgt 2744 Score = 67.9 bits (34), Expect = 2e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 239 cccgtctgggactgggacaacctcctcgacttcgccatcccggatgacgattccctgctc 298 |||||||||||||||| |||||||||||||||||| ||| || ||||| || ||| || Sbjct: 299 cccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtc 358 Query: 299 ctcccgtggg 308 |||||||||| Sbjct: 359 ctcccgtggg 368
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 176 bits (89), Expect = 3e-40 Identities = 149/169 (88%) Strand = Plus / Plus Query: 833 catatattattagattttgatgaagacaaaaggagttgtagaagaaagctggagaggcac 892 ||||||||| ||||||| |||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 109381 catatattactagatttcgatgaagataaaaggagttgtagaaggaaattggagcggcac 109440 Query: 893 aacaaaagaagaagaaggaaacctgattcgaagggcacattggagaaagagatagatgaa 952 |||||||||||| |||| ||||||||||| || |||| |||||||||||| |||||||| Sbjct: 109441 aacaaaagaagacgaagaaaacctgattccaaaggcatattggagaaagatatagatgac 109500 Query: 953 caattggatttgtcagctgatggtagcggtggcggtgaactaagagaag 1001 || |||||||| ||||| |||||||| |||| |||||||||||||||| Sbjct: 109501 cagttggatttttcagcagatggtagtggtgatggtgaactaagagaag 109549 Score = 159 bits (80), Expect = 7e-35 Identities = 101/108 (93%) Strand = Plus / Plus Query: 1322 atatttgagtggttgtctagcatgcctgttgaattggagggctacattcgtcctggctgc 1381 |||||||||||| | |||||||||||||||||| |||||||||| ||||||||||| || Sbjct: 110505 atatttgagtggctttctagcatgcctgttgaactggagggctatattcgtcctggttgt 110564 Query: 1382 acaattttaactgtatttattgcaatgccacaacatatgtgggacaag 1429 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110565 acaattttaactgtatttgttgcaatgccacaacatatgtgggacaag 110612 Score = 155 bits (78), Expect = 1e-33 Identities = 258/318 (81%) Strand = Plus / Plus Query: 2009 ccttgcgagctttgggaacttcaacaaactgcaatgtcgggatttctgatagagattggg 2068 ||||| |||||| | | ||||| ||| |||||||||| |||||| || || || ||||| Sbjct: 114527 ccttgtgagcttcgaggacttcgacagactgcaatgttgggattcctcatcgacattgga 114586 Query: 2069 tggttattaaagaagccctctccagatgaatttaaaaatttactaagtaaaacaaatatc 2128 ||| || ||| |||||| || |||||||||| |||| |||| ||| | |||||||| Sbjct: 114587 tggctaataaggaagccatccatagatgaatttcaaaacctactgagtttagcaaatatc 114646 Query: 2129 aagagatggatatgtgtgttgaagttcttgatacagaacaattttattaatgttcttgaa 2188 ||||||||||||| || |||| ||| ||||||||||| ||||||| |||||||| ||| Sbjct: 114647 cagagatggatatgcatgatgaaattcctgatacagaacgattttatcaatgttctggaa 114706 Query: 2189 atgattttgatgtcatcggacaacatcataggctctgaggttctttctaacctagaaaag 2248 || || ||| || | ||||||||||||||| || ||| ||||||||||| | |||||| Sbjct: 114707 ataatagtgaactcgttggacaacatcatagggtcagagcttctttctaacttggaaaag 114766 Query: 2249 gggcgattggaacatcatgtcacagcattccttggatatataagacatgctcgaaacatt 2308 || || ||||| ||||||| |||| ||| ||||| ||| |||| | |||||||||||| Sbjct: 114767 ggtagactggaaaatcatgtaacagaatttcttgggtatgtaagcgaagctcgaaacatt 114826 Query: 2309 gttgataatagagctaaa 2326 |||||||||||| ||||| Sbjct: 114827 gttgataatagacctaaa 114844 Score = 147 bits (74), Expect = 3e-31 Identities = 122/138 (88%) Strand = Plus / Plus Query: 1546 agatggagcaacattgatgagtaccagattagaggtacaagccccaaggatccattgtgt 1605 |||||| |||||||||| |||||||||||||||||||| |||| ||||| || | ||| Sbjct: 111419 agatggtgcaacattgaccagtaccagattagaggtacagtccccgaggattcactatgt 111478 Query: 1606 tcatccaacatggtttgaagcaggaaagcctattgaactcctcctttgtggaagttctct 1665 ||||||| |||||||||||||||||||||| || || || | ||||||||||||||||| Sbjct: 111479 tcatccatcatggtttgaagcaggaaagcccatcgatcttattctttgtggaagttctct 111538 Query: 1666 tgatcagcctaaattcag 1683 |||||||||||||||||| Sbjct: 111539 tgatcagcctaaattcag 111556 Score = 119 bits (60), Expect = 6e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 1859 gtggaaaacgtgtttgggctatcaaattttgtccctatccttttcggtagcaaacagtta 1918 ||||||||| |||||||||||||||||||||| ||||||||| | |||||||| || ||| Sbjct: 114407 gtggaaaacatgtttgggctatcaaattttgttcctatccttgttggtagcaagcattta 114466 Query: 1919 tgttttgaactagagaggatacaagatgctctttgtggttcttc 1962 |||| |||||||||| |||||| |||||||| ||||||||||| Sbjct: 114467 tgttctgaactagagcagatacatgatgctctgtgtggttcttc 114510 Score = 115 bits (58), Expect = 9e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 683 atgaggtgccaagtgccgggctgtgaggcggatatacgggagctgaaagggtaccacaag 742 |||| |||||| ||||| || ||||||||||| ||||| |||||||| || |||||| Sbjct: 107734 atgaagtgccaggtgcctggttgtgaggcggacatacgtgagctgaagggataccaccgc 107793 Query: 743 cggcaccgggtgtgtctgcgttgcgcgcacgcgtctgccgtcatgctcgatggcgtccag 802 |||||| |||||||| |||| ||||||||||| | || |||||||| ||||| |||||| Sbjct: 107794 cggcacagggtgtgtttgcgctgcgcgcacgccgccgctgtcatgcttgatggtgtccag 107853 Query: 803 aagcgctactgccagcagtgcggcaa 828 |||||||| ||||||||||| ||||| Sbjct: 107854 aagcgctattgccagcagtgtggcaa 107879 Score = 109 bits (55), Expect = 6e-20 Identities = 124/147 (84%) Strand = Plus / Plus Query: 1030 gcttgagactgttcttagcaacaaagttttagacagagcaacaccggtgggatctgaaga 1089 ||||||||||||||| ||||| || ||||| ||||| | |||||| ||||| || || || Sbjct: 110011 gcttgagactgttctgagcaataaggttttggacagggaaacacctgtgggttccgatga 110070 Query: 1090 tgccgttagttctccaacttgtacacaactcagcttgcaaaatgaccaaagtaaaagcat 1149 || ||||||||||||| ||| |||||| ||| ||||||| ||||||||||||||| | Sbjct: 110071 tgtgcttagttctccaacatgtgcacaacccagtttgcaaatcgaccaaagtaaaagctt 110130 Query: 1150 agtgacttttgcagcttctgatgaagc 1176 ||||||||| || ||||||| |||||| Sbjct: 110131 agtgactttcgctgcttctgttgaagc 110157 Score = 105 bits (53), Expect = 9e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 449 aagcgcgacccgcggctggtgtgccctaactacctcgcggggattgtgccctgtgcgtgc 508 |||||||||||||||||||| ||||| ||||||||||| |||| ||||| || |||||| Sbjct: 107518 aagcgcgacccgcggctggtttgcccgaactacctcgccgggagggtgccgtgcgcgtgc 107577 Query: 509 cccgagttggatgagatggcggccgccgcggaggtcgagga 549 |||||| | || ||||||||||||||| |||||||||||| Sbjct: 107578 cccgagattgacgagatggcggccgccttggaggtcgagga 107618 Score = 87.7 bits (44), Expect = 2e-13 Identities = 101/120 (84%) Strand = Plus / Plus Query: 1428 agttatcagaagatacagcaaatcttgtcaggaacttggtaaatgctccgagcagtcttc 1487 ||||||| ||||| |||| ||||||||||| | ||||||||||||||| | ||||| | Sbjct: 110986 agttatccgaagacacaggaaatcttgtcaaaagcttggtaaatgctccaaatagtctcc 111045 Query: 1488 tattggataaaggggccttttttgttcatgtcaataacacaatatttcaagtattcaaag 1547 | |||| |||||||||||| ||| | ||||||||||| | |||||||||||||| |||| Sbjct: 111046 tgttgggtaaaggggccttctttatccatgtcaataatatgatatttcaagtattgaaag 111105 Score = 83.8 bits (42), Expect = 3e-12 Identities = 114/138 (82%) Strand = Plus / Plus Query: 2574 cttttccaggtggtgctatgagaatgcgactcatcacgactgtggcagtggctgctgtat 2633 |||||||||||||||| ||||||||||| || ||| ||||||| | | | |||||| Sbjct: 115852 cttttccaggtggtgccatgagaatgcgtcttgccaccactgtggtaattggtgctgtgg 115911 Query: 2634 tgtgtttcacggcctgtgttgccgtgttccacccagatagagtaggggtgcttgcagctc 2693 | ||||| | || ||||||| | | ||||||||| | ||||||||||||||||| || | Sbjct: 115912 tatgttttgcagcttgtgttgtccttttccacccacacagagtaggggtgcttgccgcgc 115971 Query: 2694 cagtaaagaggtacttgt 2711 |||||||||||||||||| Sbjct: 115972 cagtaaagaggtacttgt 115989 Score = 67.9 bits (34), Expect = 2e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 239 cccgtctgggactgggacaacctcctcgacttcgccatcccggatgacgattccctgctc 298 |||||||||||||||| |||||||||||||||||| ||| || ||||| || ||| || Sbjct: 107293 cccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtc 107352 Query: 299 ctcccgtggg 308 |||||||||| Sbjct: 107353 ctcccgtggg 107362 Score = 58.0 bits (29), Expect = 2e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1181 aaacaggaaaatgcgaaacttaccaattccccagtgcatgacagcaagagtgcttattca 1240 ||||||||||| | |||||||||||||| || |||||||||| |||||| |||| ||| Sbjct: 110171 aaacaggaaaacaccaaacttaccaattctcctgtgcatgacacaaagagtacttactca 110230 Query: 1241 tcctc 1245 ||||| Sbjct: 110231 tcctc 110235 Score = 48.1 bits (24), Expect = 0.18 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1250 cccacaggacgcatttcgttcaagttgtacgactggaatcccgcggagtttcctcg 1305 ||||||||||| | || |||||||||||||| |||||||| || || |||||||| Sbjct: 110342 cccacaggacgtgtatcattcaagttgtacgattggaatcctgctgaatttcctcg 110397 Score = 48.1 bits (24), Expect = 0.18 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1697 tttgatggagagtacttgaagcatgattgttgccgt 1732 ||||||||| ||||||||||||||||||| ||||| Sbjct: 113710 tttgatggactgtacttgaagcatgattgtcgccgt 113745
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0014K18, complete sequence Length = 123508 Score = 176 bits (89), Expect = 3e-40 Identities = 149/169 (88%) Strand = Plus / Plus Query: 833 catatattattagattttgatgaagacaaaaggagttgtagaagaaagctggagaggcac 892 ||||||||| ||||||| |||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 33931 catatattactagatttcgatgaagataaaaggagttgtagaaggaaattggagcggcac 33990 Query: 893 aacaaaagaagaagaaggaaacctgattcgaagggcacattggagaaagagatagatgaa 952 |||||||||||| |||| ||||||||||| || |||| |||||||||||| |||||||| Sbjct: 33991 aacaaaagaagacgaagaaaacctgattccaaaggcatattggagaaagatatagatgac 34050 Query: 953 caattggatttgtcagctgatggtagcggtggcggtgaactaagagaag 1001 || |||||||| ||||| |||||||| |||| |||||||||||||||| Sbjct: 34051 cagttggatttttcagcagatggtagtggtgatggtgaactaagagaag 34099 Score = 159 bits (80), Expect = 7e-35 Identities = 101/108 (93%) Strand = Plus / Plus Query: 1322 atatttgagtggttgtctagcatgcctgttgaattggagggctacattcgtcctggctgc 1381 |||||||||||| | |||||||||||||||||| |||||||||| ||||||||||| || Sbjct: 35055 atatttgagtggctttctagcatgcctgttgaactggagggctatattcgtcctggttgt 35114 Query: 1382 acaattttaactgtatttattgcaatgccacaacatatgtgggacaag 1429 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 35115 acaattttaactgtatttgttgcaatgccacaacatatgtgggacaag 35162 Score = 155 bits (78), Expect = 1e-33 Identities = 258/318 (81%) Strand = Plus / Plus Query: 2009 ccttgcgagctttgggaacttcaacaaactgcaatgtcgggatttctgatagagattggg 2068 ||||| |||||| | | ||||| ||| |||||||||| |||||| || || || ||||| Sbjct: 39077 ccttgtgagcttcgaggacttcgacagactgcaatgttgggattcctcatcgacattgga 39136 Query: 2069 tggttattaaagaagccctctccagatgaatttaaaaatttactaagtaaaacaaatatc 2128 ||| || ||| |||||| || |||||||||| |||| |||| ||| | |||||||| Sbjct: 39137 tggctaataaggaagccatccatagatgaatttcaaaacctactgagtttagcaaatatc 39196 Query: 2129 aagagatggatatgtgtgttgaagttcttgatacagaacaattttattaatgttcttgaa 2188 ||||||||||||| || |||| ||| ||||||||||| ||||||| |||||||| ||| Sbjct: 39197 cagagatggatatgcatgatgaaattcctgatacagaacgattttatcaatgttctggaa 39256 Query: 2189 atgattttgatgtcatcggacaacatcataggctctgaggttctttctaacctagaaaag 2248 || || ||| || | ||||||||||||||| || ||| ||||||||||| | |||||| Sbjct: 39257 ataatagtgaactcgttggacaacatcatagggtcagagcttctttctaacttggaaaag 39316 Query: 2249 gggcgattggaacatcatgtcacagcattccttggatatataagacatgctcgaaacatt 2308 || || ||||| ||||||| |||| ||| ||||| ||| |||| | |||||||||||| Sbjct: 39317 ggtagactggaaaatcatgtaacagaatttcttgggtatgtaagcgaagctcgaaacatt 39376 Query: 2309 gttgataatagagctaaa 2326 |||||||||||| ||||| Sbjct: 39377 gttgataatagacctaaa 39394 Score = 147 bits (74), Expect = 3e-31 Identities = 122/138 (88%) Strand = Plus / Plus Query: 1546 agatggagcaacattgatgagtaccagattagaggtacaagccccaaggatccattgtgt 1605 |||||| |||||||||| |||||||||||||||||||| |||| ||||| || | ||| Sbjct: 35969 agatggtgcaacattgaccagtaccagattagaggtacagtccccgaggattcactatgt 36028 Query: 1606 tcatccaacatggtttgaagcaggaaagcctattgaactcctcctttgtggaagttctct 1665 ||||||| |||||||||||||||||||||| || || || | ||||||||||||||||| Sbjct: 36029 tcatccatcatggtttgaagcaggaaagcccatcgatcttattctttgtggaagttctct 36088 Query: 1666 tgatcagcctaaattcag 1683 |||||||||||||||||| Sbjct: 36089 tgatcagcctaaattcag 36106 Score = 119 bits (60), Expect = 6e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 1859 gtggaaaacgtgtttgggctatcaaattttgtccctatccttttcggtagcaaacagtta 1918 ||||||||| |||||||||||||||||||||| ||||||||| | |||||||| || ||| Sbjct: 38957 gtggaaaacatgtttgggctatcaaattttgttcctatccttgttggtagcaagcattta 39016 Query: 1919 tgttttgaactagagaggatacaagatgctctttgtggttcttc 1962 |||| |||||||||| |||||| |||||||| ||||||||||| Sbjct: 39017 tgttctgaactagagcagatacatgatgctctgtgtggttcttc 39060 Score = 115 bits (58), Expect = 9e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 683 atgaggtgccaagtgccgggctgtgaggcggatatacgggagctgaaagggtaccacaag 742 |||| |||||| ||||| || ||||||||||| ||||| |||||||| || |||||| Sbjct: 32284 atgaagtgccaggtgcctggttgtgaggcggacatacgtgagctgaagggataccaccgc 32343 Query: 743 cggcaccgggtgtgtctgcgttgcgcgcacgcgtctgccgtcatgctcgatggcgtccag 802 |||||| |||||||| |||| ||||||||||| | || |||||||| ||||| |||||| Sbjct: 32344 cggcacagggtgtgtttgcgctgcgcgcacgccgccgctgtcatgcttgatggtgtccag 32403 Query: 803 aagcgctactgccagcagtgcggcaa 828 |||||||| ||||||||||| ||||| Sbjct: 32404 aagcgctattgccagcagtgtggcaa 32429 Score = 109 bits (55), Expect = 6e-20 Identities = 124/147 (84%) Strand = Plus / Plus Query: 1030 gcttgagactgttcttagcaacaaagttttagacagagcaacaccggtgggatctgaaga 1089 ||||||||||||||| ||||| || ||||| ||||| | |||||| ||||| || || || Sbjct: 34561 gcttgagactgttctgagcaataaggttttggacagggaaacacctgtgggttccgatga 34620 Query: 1090 tgccgttagttctccaacttgtacacaactcagcttgcaaaatgaccaaagtaaaagcat 1149 || ||||||||||||| ||| |||||| ||| ||||||| ||||||||||||||| | Sbjct: 34621 tgtgcttagttctccaacatgtgcacaacccagtttgcaaatcgaccaaagtaaaagctt 34680 Query: 1150 agtgacttttgcagcttctgatgaagc 1176 ||||||||| || ||||||| |||||| Sbjct: 34681 agtgactttcgctgcttctgttgaagc 34707 Score = 105 bits (53), Expect = 9e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 449 aagcgcgacccgcggctggtgtgccctaactacctcgcggggattgtgccctgtgcgtgc 508 |||||||||||||||||||| ||||| ||||||||||| |||| ||||| || |||||| Sbjct: 32068 aagcgcgacccgcggctggtttgcccgaactacctcgccgggagggtgccgtgcgcgtgc 32127 Query: 509 cccgagttggatgagatggcggccgccgcggaggtcgagga 549 |||||| | || ||||||||||||||| |||||||||||| Sbjct: 32128 cccgagattgacgagatggcggccgccttggaggtcgagga 32168 Score = 87.7 bits (44), Expect = 2e-13 Identities = 101/120 (84%) Strand = Plus / Plus Query: 1428 agttatcagaagatacagcaaatcttgtcaggaacttggtaaatgctccgagcagtcttc 1487 ||||||| ||||| |||| ||||||||||| | ||||||||||||||| | ||||| | Sbjct: 35536 agttatccgaagacacaggaaatcttgtcaaaagcttggtaaatgctccaaatagtctcc 35595 Query: 1488 tattggataaaggggccttttttgttcatgtcaataacacaatatttcaagtattcaaag 1547 | |||| |||||||||||| ||| | ||||||||||| | |||||||||||||| |||| Sbjct: 35596 tgttgggtaaaggggccttctttatccatgtcaataatatgatatttcaagtattgaaag 35655 Score = 83.8 bits (42), Expect = 3e-12 Identities = 114/138 (82%) Strand = Plus / Plus Query: 2574 cttttccaggtggtgctatgagaatgcgactcatcacgactgtggcagtggctgctgtat 2633 |||||||||||||||| ||||||||||| || ||| ||||||| | | | |||||| Sbjct: 40402 cttttccaggtggtgccatgagaatgcgtcttgccaccactgtggtaattggtgctgtgg 40461 Query: 2634 tgtgtttcacggcctgtgttgccgtgttccacccagatagagtaggggtgcttgcagctc 2693 | ||||| | || ||||||| | | ||||||||| | ||||||||||||||||| || | Sbjct: 40462 tatgttttgcagcttgtgttgtccttttccacccacacagagtaggggtgcttgccgcgc 40521 Query: 2694 cagtaaagaggtacttgt 2711 |||||||||||||||||| Sbjct: 40522 cagtaaagaggtacttgt 40539 Score = 67.9 bits (34), Expect = 2e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 239 cccgtctgggactgggacaacctcctcgacttcgccatcccggatgacgattccctgctc 298 |||||||||||||||| |||||||||||||||||| ||| || ||||| || ||| || Sbjct: 31843 cccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtc 31902 Query: 299 ctcccgtggg 308 |||||||||| Sbjct: 31903 ctcccgtggg 31912 Score = 58.0 bits (29), Expect = 2e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1181 aaacaggaaaatgcgaaacttaccaattccccagtgcatgacagcaagagtgcttattca 1240 ||||||||||| | |||||||||||||| || |||||||||| |||||| |||| ||| Sbjct: 34721 aaacaggaaaacaccaaacttaccaattctcctgtgcatgacacaaagagtacttactca 34780 Query: 1241 tcctc 1245 ||||| Sbjct: 34781 tcctc 34785 Score = 48.1 bits (24), Expect = 0.18 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1250 cccacaggacgcatttcgttcaagttgtacgactggaatcccgcggagtttcctcg 1305 ||||||||||| | || |||||||||||||| |||||||| || || |||||||| Sbjct: 34892 cccacaggacgtgtatcattcaagttgtacgattggaatcctgctgaatttcctcg 34947 Score = 48.1 bits (24), Expect = 0.18 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1697 tttgatggagagtacttgaagcatgattgttgccgt 1732 ||||||||| ||||||||||||||||||| ||||| Sbjct: 38260 tttgatggactgtacttgaagcatgattgtcgccgt 38295
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 176 bits (89), Expect = 3e-40 Identities = 149/169 (88%) Strand = Plus / Plus Query: 833 catatattattagattttgatgaagacaaaaggagttgtagaagaaagctggagaggcac 892 ||||||||| ||||||| |||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 19781307 catatattactagatttcgatgaagataaaaggagttgtagaaggaaattggagcggcac 19781366 Query: 893 aacaaaagaagaagaaggaaacctgattcgaagggcacattggagaaagagatagatgaa 952 |||||||||||| |||| ||||||||||| || |||| |||||||||||| |||||||| Sbjct: 19781367 aacaaaagaagacgaagaaaacctgattccaaaggcatattggagaaagatatagatgac 19781426 Query: 953 caattggatttgtcagctgatggtagcggtggcggtgaactaagagaag 1001 || |||||||| ||||| |||||||| |||| |||||||||||||||| Sbjct: 19781427 cagttggatttttcagcagatggtagtggtgatggtgaactaagagaag 19781475 Score = 159 bits (80), Expect = 7e-35 Identities = 101/108 (93%) Strand = Plus / Plus Query: 1322 atatttgagtggttgtctagcatgcctgttgaattggagggctacattcgtcctggctgc 1381 |||||||||||| | |||||||||||||||||| |||||||||| ||||||||||| || Sbjct: 19782431 atatttgagtggctttctagcatgcctgttgaactggagggctatattcgtcctggttgt 19782490 Query: 1382 acaattttaactgtatttattgcaatgccacaacatatgtgggacaag 1429 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19782491 acaattttaactgtatttgttgcaatgccacaacatatgtgggacaag 19782538 Score = 155 bits (78), Expect = 1e-33 Identities = 258/318 (81%) Strand = Plus / Plus Query: 2009 ccttgcgagctttgggaacttcaacaaactgcaatgtcgggatttctgatagagattggg 2068 ||||| |||||| | | ||||| ||| |||||||||| |||||| || || || ||||| Sbjct: 19786453 ccttgtgagcttcgaggacttcgacagactgcaatgttgggattcctcatcgacattgga 19786512 Query: 2069 tggttattaaagaagccctctccagatgaatttaaaaatttactaagtaaaacaaatatc 2128 ||| || ||| |||||| || |||||||||| |||| |||| ||| | |||||||| Sbjct: 19786513 tggctaataaggaagccatccatagatgaatttcaaaacctactgagtttagcaaatatc 19786572 Query: 2129 aagagatggatatgtgtgttgaagttcttgatacagaacaattttattaatgttcttgaa 2188 ||||||||||||| || |||| ||| ||||||||||| ||||||| |||||||| ||| Sbjct: 19786573 cagagatggatatgcatgatgaaattcctgatacagaacgattttatcaatgttctggaa 19786632 Query: 2189 atgattttgatgtcatcggacaacatcataggctctgaggttctttctaacctagaaaag 2248 || || ||| || | ||||||||||||||| || ||| ||||||||||| | |||||| Sbjct: 19786633 ataatagtgaactcgttggacaacatcatagggtcagagcttctttctaacttggaaaag 19786692 Query: 2249 gggcgattggaacatcatgtcacagcattccttggatatataagacatgctcgaaacatt 2308 || || ||||| ||||||| |||| ||| ||||| ||| |||| | |||||||||||| Sbjct: 19786693 ggtagactggaaaatcatgtaacagaatttcttgggtatgtaagcgaagctcgaaacatt 19786752 Query: 2309 gttgataatagagctaaa 2326 |||||||||||| ||||| Sbjct: 19786753 gttgataatagacctaaa 19786770 Score = 147 bits (74), Expect = 3e-31 Identities = 122/138 (88%) Strand = Plus / Plus Query: 1546 agatggagcaacattgatgagtaccagattagaggtacaagccccaaggatccattgtgt 1605 |||||| |||||||||| |||||||||||||||||||| |||| ||||| || | ||| Sbjct: 19783345 agatggtgcaacattgaccagtaccagattagaggtacagtccccgaggattcactatgt 19783404 Query: 1606 tcatccaacatggtttgaagcaggaaagcctattgaactcctcctttgtggaagttctct 1665 ||||||| |||||||||||||||||||||| || || || | ||||||||||||||||| Sbjct: 19783405 tcatccatcatggtttgaagcaggaaagcccatcgatcttattctttgtggaagttctct 19783464 Query: 1666 tgatcagcctaaattcag 1683 |||||||||||||||||| Sbjct: 19783465 tgatcagcctaaattcag 19783482 Score = 119 bits (60), Expect = 6e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 1859 gtggaaaacgtgtttgggctatcaaattttgtccctatccttttcggtagcaaacagtta 1918 ||||||||| |||||||||||||||||||||| ||||||||| | |||||||| || ||| Sbjct: 19786333 gtggaaaacatgtttgggctatcaaattttgttcctatccttgttggtagcaagcattta 19786392 Query: 1919 tgttttgaactagagaggatacaagatgctctttgtggttcttc 1962 |||| |||||||||| |||||| |||||||| ||||||||||| Sbjct: 19786393 tgttctgaactagagcagatacatgatgctctgtgtggttcttc 19786436 Score = 115 bits (58), Expect = 9e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 683 atgaggtgccaagtgccgggctgtgaggcggatatacgggagctgaaagggtaccacaag 742 |||| |||||| ||||| || ||||||||||| ||||| |||||||| || |||||| Sbjct: 19779660 atgaagtgccaggtgcctggttgtgaggcggacatacgtgagctgaagggataccaccgc 19779719 Query: 743 cggcaccgggtgtgtctgcgttgcgcgcacgcgtctgccgtcatgctcgatggcgtccag 802 |||||| |||||||| |||| ||||||||||| | || |||||||| ||||| |||||| Sbjct: 19779720 cggcacagggtgtgtttgcgctgcgcgcacgccgccgctgtcatgcttgatggtgtccag 19779779 Query: 803 aagcgctactgccagcagtgcggcaa 828 |||||||| ||||||||||| ||||| Sbjct: 19779780 aagcgctattgccagcagtgtggcaa 19779805 Score = 109 bits (55), Expect = 6e-20 Identities = 124/147 (84%) Strand = Plus / Plus Query: 1030 gcttgagactgttcttagcaacaaagttttagacagagcaacaccggtgggatctgaaga 1089 ||||||||||||||| ||||| || ||||| ||||| | |||||| ||||| || || || Sbjct: 19781937 gcttgagactgttctgagcaataaggttttggacagggaaacacctgtgggttccgatga 19781996 Query: 1090 tgccgttagttctccaacttgtacacaactcagcttgcaaaatgaccaaagtaaaagcat 1149 || ||||||||||||| ||| |||||| ||| ||||||| ||||||||||||||| | Sbjct: 19781997 tgtgcttagttctccaacatgtgcacaacccagtttgcaaatcgaccaaagtaaaagctt 19782056 Query: 1150 agtgacttttgcagcttctgatgaagc 1176 ||||||||| || ||||||| |||||| Sbjct: 19782057 agtgactttcgctgcttctgttgaagc 19782083 Score = 105 bits (53), Expect = 9e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 449 aagcgcgacccgcggctggtgtgccctaactacctcgcggggattgtgccctgtgcgtgc 508 |||||||||||||||||||| ||||| ||||||||||| |||| ||||| || |||||| Sbjct: 19779444 aagcgcgacccgcggctggtttgcccgaactacctcgccgggagggtgccgtgcgcgtgc 19779503 Query: 509 cccgagttggatgagatggcggccgccgcggaggtcgagga 549 |||||| | || ||||||||||||||| |||||||||||| Sbjct: 19779504 cccgagattgacgagatggcggccgccttggaggtcgagga 19779544 Score = 87.7 bits (44), Expect = 2e-13 Identities = 101/120 (84%) Strand = Plus / Plus Query: 1428 agttatcagaagatacagcaaatcttgtcaggaacttggtaaatgctccgagcagtcttc 1487 ||||||| ||||| |||| ||||||||||| | ||||||||||||||| | ||||| | Sbjct: 19782912 agttatccgaagacacaggaaatcttgtcaaaagcttggtaaatgctccaaatagtctcc 19782971 Query: 1488 tattggataaaggggccttttttgttcatgtcaataacacaatatttcaagtattcaaag 1547 | |||| |||||||||||| ||| | ||||||||||| | |||||||||||||| |||| Sbjct: 19782972 tgttgggtaaaggggccttctttatccatgtcaataatatgatatttcaagtattgaaag 19783031 Score = 83.8 bits (42), Expect = 3e-12 Identities = 114/138 (82%) Strand = Plus / Plus Query: 2574 cttttccaggtggtgctatgagaatgcgactcatcacgactgtggcagtggctgctgtat 2633 |||||||||||||||| ||||||||||| || ||| ||||||| | | | |||||| Sbjct: 19787778 cttttccaggtggtgccatgagaatgcgtcttgccaccactgtggtaattggtgctgtgg 19787837 Query: 2634 tgtgtttcacggcctgtgttgccgtgttccacccagatagagtaggggtgcttgcagctc 2693 | ||||| | || ||||||| | | ||||||||| | ||||||||||||||||| || | Sbjct: 19787838 tatgttttgcagcttgtgttgtccttttccacccacacagagtaggggtgcttgccgcgc 19787897 Query: 2694 cagtaaagaggtacttgt 2711 |||||||||||||||||| Sbjct: 19787898 cagtaaagaggtacttgt 19787915 Score = 67.9 bits (34), Expect = 2e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 239 cccgtctgggactgggacaacctcctcgacttcgccatcccggatgacgattccctgctc 298 |||||||||||||||| |||||||||||||||||| ||| || ||||| || ||| || Sbjct: 19779219 cccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtc 19779278 Query: 299 ctcccgtggg 308 |||||||||| Sbjct: 19779279 ctcccgtggg 19779288 Score = 58.0 bits (29), Expect = 2e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1181 aaacaggaaaatgcgaaacttaccaattccccagtgcatgacagcaagagtgcttattca 1240 ||||||||||| | |||||||||||||| || |||||||||| |||||| |||| ||| Sbjct: 19782097 aaacaggaaaacaccaaacttaccaattctcctgtgcatgacacaaagagtacttactca 19782156 Query: 1241 tcctc 1245 ||||| Sbjct: 19782157 tcctc 19782161 Score = 48.1 bits (24), Expect = 0.18 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1250 cccacaggacgcatttcgttcaagttgtacgactggaatcccgcggagtttcctcg 1305 ||||||||||| | || |||||||||||||| |||||||| || || |||||||| Sbjct: 19782268 cccacaggacgtgtatcattcaagttgtacgattggaatcctgctgaatttcctcg 19782323 Score = 48.1 bits (24), Expect = 0.18 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1697 tttgatggagagtacttgaagcatgattgttgccgt 1732 ||||||||| ||||||||||||||||||| ||||| Sbjct: 19785636 tttgatggactgtacttgaagcatgattgtcgccgt 19785671
>ref|NM_180519.1| Arabidopsis thaliana SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7); DNA binding / transcription factor (SPL7) mRNA, complete cds Length = 2876 Score = 77.8 bits (39), Expect = 2e-10 Identities = 111/135 (82%) Strand = Plus / Plus Query: 1277 tacgactggaatcccgcggagtttcctcggcgtctacgtaaccaaatatttgagtggttg 1336 ||||| |||||||| |||||||| || ||| | |||||| | ||||||||| | |||||| Sbjct: 1076 tacgattggaatccagcggagttcccacggagactacgtcatcaaatatttcaatggttg 1135 Query: 1337 tctagcatgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgta 1396 | | |||||||||||| |||||||||| || || || || || |||||||| ||||| Sbjct: 1136 gccaacatgcctgttgagctggagggctatatccgcccaggatgtacaattttgactgtc 1195 Query: 1397 tttattgcaatgcca 1411 ||||| ||||||||| Sbjct: 1196 tttatagcaatgcca 1210
>ref|NM_121888.2| Arabidopsis thaliana SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7); DNA binding / transcription factor (SPL7) mRNA, complete cds Length = 2954 Score = 77.8 bits (39), Expect = 2e-10 Identities = 111/135 (82%) Strand = Plus / Plus Query: 1277 tacgactggaatcccgcggagtttcctcggcgtctacgtaaccaaatatttgagtggttg 1336 ||||| |||||||| |||||||| || ||| | |||||| | ||||||||| | |||||| Sbjct: 1076 tacgattggaatccagcggagttcccacggagactacgtcatcaaatatttcaatggttg 1135 Query: 1337 tctagcatgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgta 1396 | | |||||||||||| |||||||||| || || || || || |||||||| ||||| Sbjct: 1136 gccaacatgcctgttgagctggagggctatatccgcccaggatgtacaattttgactgtc 1195 Query: 1397 tttattgcaatgcca 1411 ||||| ||||||||| Sbjct: 1196 tttatagcaatgcca 1210
>gb|AY063815.1| Arabidopsis thaliana putative squamosa promoter binding protein 7 (At5g18830) mRNA, complete cds Length = 2896 Score = 77.8 bits (39), Expect = 2e-10 Identities = 111/135 (82%) Strand = Plus / Plus Query: 1277 tacgactggaatcccgcggagtttcctcggcgtctacgtaaccaaatatttgagtggttg 1336 ||||| |||||||| |||||||| || ||| | |||||| | ||||||||| | |||||| Sbjct: 1076 tacgattggaatccagcggagttcccacggagactacgtcatcaaatatttcaatggttg 1135 Query: 1337 tctagcatgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgta 1396 | | |||||||||||| |||||||||| || || || || || |||||||| ||||| Sbjct: 1136 gccaacatgcctgttgagctggagggctatatccgcccaggatgtacaattttgactgtc 1195 Query: 1397 tttattgcaatgcca 1411 ||||| ||||||||| Sbjct: 1196 tttatagcaatgcca 1210
>gb|AY078050.1| Arabidopsis thaliana AT5g18830/F17K4_80 mRNA, complete cds Length = 2370 Score = 77.8 bits (39), Expect = 2e-10 Identities = 111/135 (82%) Strand = Plus / Plus Query: 1277 tacgactggaatcccgcggagtttcctcggcgtctacgtaaccaaatatttgagtggttg 1336 ||||| |||||||| |||||||| || ||| | |||||| | ||||||||| | |||||| Sbjct: 946 tacgattggaatccagcggagttcccacggagactacgtcatcaaatatttcaatggttg 1005 Query: 1337 tctagcatgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgta 1396 | | |||||||||||| |||||||||| || || || || || |||||||| ||||| Sbjct: 1006 gccaacatgcctgttgagctggagggctatatccgcccaggatgtacaattttgactgtc 1065 Query: 1397 tttattgcaatgcca 1411 ||||| ||||||||| Sbjct: 1066 tttatagcaatgcca 1080
>gb|AF367355.1| Arabidopsis thaliana AT5g18830/F17K4_80 mRNA, complete cds Length = 2842 Score = 77.8 bits (39), Expect = 2e-10 Identities = 111/135 (82%) Strand = Plus / Plus Query: 1277 tacgactggaatcccgcggagtttcctcggcgtctacgtaaccaaatatttgagtggttg 1336 ||||| |||||||| |||||||| || ||| | |||||| | ||||||||| | |||||| Sbjct: 1044 tacgattggaatccagcggagttcccacggagactacgtcatcaaatatttcaatggttg 1103 Query: 1337 tctagcatgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgta 1396 | | |||||||||||| |||||||||| || || || || || |||||||| ||||| Sbjct: 1104 gccaacatgcctgttgagctggagggctatatccgcccaggatgtacaattttgactgtc 1163 Query: 1397 tttattgcaatgcca 1411 ||||| ||||||||| Sbjct: 1164 tttatagcaatgcca 1178
>emb|BX831047.1|CNS09YQ7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2851 Score = 77.8 bits (39), Expect = 2e-10 Identities = 111/135 (82%) Strand = Plus / Plus Query: 1277 tacgactggaatcccgcggagtttcctcggcgtctacgtaaccaaatatttgagtggttg 1336 ||||| |||||||| |||||||| || ||| | |||||| | ||||||||| | |||||| Sbjct: 1059 tacgattggaatccagcggagttcccacggagactacgtcatcaaatatttcaatggttg 1118 Query: 1337 tctagcatgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgta 1396 | | |||||||||||| |||||||||| || || || || || |||||||| ||||| Sbjct: 1119 gccaacatgcctgttgagctggagggctatatccgcccaggatgtacaattttgactgtc 1178 Query: 1397 tttattgcaatgcca 1411 ||||| ||||||||| Sbjct: 1179 tttatagcaatgcca 1193
>emb|AJ011612.1|ATH011612 Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter binding protein-like 7 Length = 2462 Score = 77.8 bits (39), Expect = 2e-10 Identities = 111/135 (82%) Strand = Plus / Plus Query: 1277 tacgactggaatcccgcggagtttcctcggcgtctacgtaaccaaatatttgagtggttg 1336 ||||| |||||||| |||||||| || ||| | |||||| | ||||||||| | |||||| Sbjct: 1002 tacgattggaatccagcggagttcccacggagactacgtcatcaaatatttcaatggttg 1061 Query: 1337 tctagcatgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgta 1396 | | |||||||||||| |||||||||| || || || || || |||||||| ||||| Sbjct: 1062 gccaacatgcctgttgagctggagggctatatccgcccaggatgtacaattttgactgtc 1121 Query: 1397 tttattgcaatgcca 1411 ||||| ||||||||| Sbjct: 1122 tttatagcaatgcca 1136
>emb|AJ011611.1|ATH011611 Arabidopsis thaliana (ecotype Landsberg erecta) mRNA for squamosa promoter binding protein-like 7, partial Length = 1186 Score = 69.9 bits (35), Expect = 5e-08 Identities = 110/135 (81%) Strand = Plus / Plus Query: 1277 tacgactggaatcccgcggagtttcctcggcgtctacgtaaccaaatatttgagtggttg 1336 ||||| |||||||| |||||||| || ||| | |||||| | |||||||| | |||||| Sbjct: 1035 tacgattggaatccagcggagttcccacggagactacgtcatcaaatattccaatggttg 1094 Query: 1337 tctagcatgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgta 1396 | | |||||||||||| |||||||||| || || || || || |||||||| ||||| Sbjct: 1095 gccaacatgcctgttgagctggagggctatatccgcccaggatgtacaattttgactgtc 1154 Query: 1397 tttattgcaatgcca 1411 ||||| ||||||||| Sbjct: 1155 tttatagcaatgcca 1169
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 58.0 bits (29), Expect = 2e-04 Identities = 59/69 (85%) Strand = Plus / Plus Query: 1342 catgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgtatttat 1401 ||||||||| || |||||| |||| ||||||||||| || || || || ||||| ||||| Sbjct: 6127 catgcctgtggagttggagagctatattcgtcctggatgtacgatattgactgtctttat 6186 Query: 1402 tgcaatgcc 1410 ||||||||| Sbjct: 6187 tgcaatgcc 6195
>gb|AC068655.3|AC068655 Genomic Sequence For Arabidopsis thaliana Clone F17K4 From Chromosome V, complete sequence Length = 89453 Score = 52.0 bits (26), Expect = 0.012 Identities = 59/70 (84%) Strand = Plus / Minus Query: 1342 catgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgtatttat 1401 |||||||||||| |||||||||| || || || || || |||||||| ||||| ||||| Sbjct: 58403 catgcctgttgagctggagggctatatccgcccaggatgtacaattttgactgtctttat 58344 Query: 1402 tgcaatgcca 1411 ||||||||| Sbjct: 58343 agcaatgcca 58334
>emb|AJ011613.1|ATH011613 Arabidopsis thaliana (ecotype Columbia) spl7 gene, exons 1-10 Length = 4920 Score = 52.0 bits (26), Expect = 0.012 Identities = 59/70 (84%) Strand = Plus / Plus Query: 1342 catgcctgttgaattggagggctacattcgtcctggctgcacaattttaactgtatttat 1401 |||||||||||| |||||||||| || || || || || |||||||| ||||| ||||| Sbjct: 1887 catgcctgttgagctggagggctatatccgcccaggatgtacaattttgactgtctttat 1946 Query: 1402 tgcaatgcca 1411 ||||||||| Sbjct: 1947 agcaatgcca 1956
>gb|AC069503.25| Homo sapiens 12 BAC RP11-87C12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186580 Score = 50.1 bits (25), Expect = 0.046 Identities = 25/25 (100%) Strand = Plus / Plus Query: 630 ctggtggtggtggcagtggcagtgg 654 ||||||||||||||||||||||||| Sbjct: 93701 ctggtggtggtggcagtggcagtgg 93725
>ref|XM_787012.2| PREDICTED: Strongylocentrotus purpuratus similar to laminin-2 alpha2 chain (LOC587274), partial mRNA Length = 1360 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 1293 tggtggtggtggcagtggcagtgg 1316
>ref|XM_001202368.1| PREDICTED: Strongylocentrotus purpuratus similar to laminin-2 alpha2 chain (LOC587274), partial mRNA Length = 1360 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 1293 tggtggtggtggcagtggcagtgg 1316
>ref|NM_001049886.1| Oryza sativa (japonica cultivar-group) Os01g0561600 (Os01g0561600) mRNA, complete cds Length = 1938 Score = 48.1 bits (24), Expect = 0.18 Identities = 27/28 (96%) Strand = Plus / Minus Query: 530 gccgccgcggaggtcgaggaggttgccg 557 |||||||||||||||||| ||||||||| Sbjct: 288 gccgccgcggaggtcgagcaggttgccg 261
>gb|AC164546.2| Mus musculus BAC clone RP24-189C11 from chromosome 17, complete sequence Length = 156583 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 48659 tggtggtggtggcagtggcagtgg 48682
>gb|AC116758.11| Mus musculus chromosome 8, clone RP23-383A10, complete sequence Length = 190294 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 180591 tggtggtggtggcagtggcagtgg 180614
>gb|AC116413.12| Mus musculus chromosome 8, clone RP24-84J11, complete sequence Length = 210471 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Minus Query: 630 ctggtggtggtggcagtggcagtg 653 |||||||||||||||||||||||| Sbjct: 125818 ctggtggtggtggcagtggcagtg 125795
>gb|AC130841.4| Mus musculus BAC clone RP24-445L16 from chromosome 8, complete sequence Length = 174384 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 80351 tggtggtggtggcagtggcagtgg 80374
>gb|AC102792.7| Mus musculus chromosome 7, clone RP23-370I17, complete sequence Length = 215999 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 150350 tggtggtggtggcagtggcagtgg 150373
>dbj|AK128242.1| Homo sapiens cDNA FLJ46376 fis, clone TESTI4052430 Length = 3451 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 618 tggtggtggtggcagtggcagtgg 641
>ref|NM_001039770.1| Homo sapiens similar to F40B5.2b (FLJ45032), mRNA dbj|AK126979.1| Homo sapiens cDNA FLJ45032 fis, clone BRAWH3018969 Length = 3962 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 1133 tggtggtggtggcagtggcagtgg 1156
>gb|AC112211.2| Homo sapiens chromosome 3 clone RP11-627J17, complete sequence Length = 182509 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 129142 tggtggtggtggcagtggcagtgg 129119
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 28415922 tggtggtggtggcagtggcagtgg 28415945
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 48.1 bits (24), Expect = 0.18 Identities = 27/28 (96%) Strand = Plus / Plus Query: 530 gccgccgcggaggtcgaggaggttgccg 557 |||||||||||||||||| ||||||||| Sbjct: 21339889 gccgccgcggaggtcgagcaggttgccg 21339916 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 206 ggcgggggcggcgcggcggccg 227 |||||||||||||||||||||| Sbjct: 38938019 ggcgggggcggcgcggcggccg 38937998
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 48.1 bits (24), Expect = 0.18 Identities = 27/28 (96%) Strand = Plus / Plus Query: 530 gccgccgcggaggtcgaggaggttgccg 557 |||||||||||||||||| ||||||||| Sbjct: 61827 gccgccgcggaggtcgagcaggttgccg 61854
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 128500 tggtggtggtggcagtggcagtgg 128523
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 22955 tggtggtggtggcagtggcagtgg 22978
>dbj|AK069494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025F12, full insert sequence Length = 1939 Score = 48.1 bits (24), Expect = 0.18 Identities = 27/28 (96%) Strand = Plus / Minus Query: 530 gccgccgcggaggtcgaggaggttgccg 557 |||||||||||||||||| ||||||||| Sbjct: 289 gccgccgcggaggtcgagcaggttgccg 262
>dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47L09, TM0218, complete sequence Length = 113213 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 70807 tggtggtggtggcagtggcagtgg 70830
>gb|AF105221.1|AF105221 Glycine max glutamyl-tRNA reductase precursor (gtr1) gene, complete cds Length = 3663 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagtgg 654 |||||||||||||||||||||||| Sbjct: 227 tggtggtggtggcagtggcagtgg 204
>gb|AC111113.17| Mus musculus chromosome 1, clone RP23-205B8, complete sequence Length = 201485 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagtg 653 ||||||||||||||||||||||| Sbjct: 69950 tggtggtggtggcagtggcagtg 69928
>gb|AC119242.5| Mus musculus chromosome 6, clone RP24-229C13, complete sequence Length = 189108 Score = 46.1 bits (23), Expect = 0.71 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1375 tggctgcacaattttaactgtatttat 1401 |||||||| |||||||||||||||||| Sbjct: 86126 tggctgcaaaattttaactgtatttat 86100
>gb|AC158653.7| Mus musculus 6 BAC RP23-418F10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185818 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtg 653 ||||||||||||||||||||||| Sbjct: 29243 tggtggtggtggcagtggcagtg 29265
>emb|CR376826.12| Zebrafish DNA sequence from clone DKEYP-78F1 in linkage group 20, complete sequence Length = 153344 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1622 gaagcaggaaagcctattgaact 1644 ||||||||||||||||||||||| Sbjct: 22456 gaagcaggaaagcctattgaact 22478
>dbj|BS000085.1| Pan troglodytes chromosome 22 clone:RP43-164H01, map 22, complete sequences Length = 171357 Score = 46.1 bits (23), Expect = 0.71 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2101 taaaaatttactaagtaaaacaaatat 2127 |||| |||||||||||||||||||||| Sbjct: 39106 taaagatttactaagtaaaacaaatat 39080
>dbj|BS000084.1| Pan troglodytes chromosome 22 clone:RP43-100I03, map 22, complete sequences Length = 154178 Score = 46.1 bits (23), Expect = 0.71 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2101 taaaaatttactaagtaaaacaaatat 2127 |||| |||||||||||||||||||||| Sbjct: 131856 taaagatttactaagtaaaacaaatat 131830
>gb|AC005857.1| Homo sapiens 14 PAC RP4-809F18 (Roswell Pack Cancer Institute Human PAC Library) complete sequence Length = 102460 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Plus Query: 632 ggtggtggtggcagtggcagtgg 654 ||||||||||||||||||||||| Sbjct: 22908 ggtggtggtggcagtggcagtgg 22930
>emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chromosome 11, complete sequence Length = 145244 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagtg 653 ||||||||||||||||||||||| Sbjct: 137541 tggtggtggtggcagtggcagtg 137563
>gb|AC005226.1|AC005226 Homo sapiens PAC clone RP4-683L10 from 14q24.3, complete sequence Length = 108554 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Plus Query: 632 ggtggtggtggcagtggcagtgg 654 ||||||||||||||||||||||| Sbjct: 91675 ggtggtggtggcagtggcagtgg 91697
>dbj|AP001686.1| Homo sapiens genomic DNA, chromosome 21q, section 30/105 Length = 340000 Score = 46.1 bits (23), Expect = 0.71 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2101 taaaaatttactaagtaaaacaaatat 2127 |||| |||||||||||||||||||||| Sbjct: 119169 taaagatttactaagtaaaacaaatat 119143
>gb|AC153591.4| Mus musculus 6 BAC RP23-301O22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211061 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagtg 653 ||||||||||||||||||||||| Sbjct: 5907 tggtggtggtggcagtggcagtg 5885
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Minus Query: 196 ctccgactccggcgggggcggcg 218 ||||||||||||||||||||||| Sbjct: 1950208 ctccgactccggcgggggcggcg 1950186
>gb|AC161420.6| Mus musculus BAC clone RP24-358O9 from chromosome 1, complete sequence Length = 200763 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagtg 653 ||||||||||||||||||||||| Sbjct: 21859 tggtggtggtggcagtggcagtg 21837
>dbj|AP000949.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B606F19, LL56-APP region, complete sequence Length = 146670 Score = 46.1 bits (23), Expect = 0.71 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2101 taaaaatttactaagtaaaacaaatat 2127 |||| |||||||||||||||||||||| Sbjct: 121983 taaagatttactaagtaaaacaaatat 121957
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 ggcgcggcggccgatgcggggg 236 |||||||||||||||||||||| Sbjct: 6864684 ggcgcggcggccgatgcggggg 6864663
>ref|XM_001233312.1| PREDICTED: Gallus gallus hypothetical protein LOC769997 (LOC769997), mRNA Length = 1812 Score = 44.1 bits (22), Expect = 2.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 884 gagaggcacaacaaaagaagaagaag 909 |||||||| ||||||||||||||||| Sbjct: 866 gagaggcaaaacaaaagaagaagaag 891
>ref|XM_001226600.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_08674) mRNA, complete cds Length = 3762 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 633 gtggtggtggcagtggcagtgg 654 |||||||||||||||||||||| Sbjct: 3254 gtggtggtggcagtggcagtgg 3275
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 633 gtggtggtggcagtggcagtgg 654 |||||||||||||||||||||| Sbjct: 10372182 gtggtggtggcagtggcagtgg 10372161
>ref|XM_001071911.1| PREDICTED: Rattus norvegicus mannosidase 2, alpha 1 (Man2a1), mRNA Length = 6959 Score = 44.1 bits (22), Expect = 2.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 205 cggcgggggcggcgcggcggccgatg 230 |||||| ||||||||||||||||||| Sbjct: 43 cggcggcggcggcgcggcggccgatg 18
>ref|XM_001071876.1| PREDICTED: Rattus norvegicus hypothetical protein LOC684769 (LOC684769), mRNA Length = 789 Score = 44.1 bits (22), Expect = 2.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 cggcgggggcggcgcggcggccgatg 230 |||||| ||||||||||||||||||| Sbjct: 615 cggcggcggcggcgcggcggccgatg 640
>ref|XM_001068826.1| PREDICTED: Rattus norvegicus mannosidase 2, alpha 1 (Man2a1), mRNA Length = 6959 Score = 44.1 bits (22), Expect = 2.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 205 cggcgggggcggcgcggcggccgatg 230 |||||| ||||||||||||||||||| Sbjct: 43 cggcggcggcggcgcggcggccgatg 18
>ref|NM_003202.2| Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 1, mRNA Length = 3283 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 200 gactccggcgggggcggcgcgg 221 |||||||||||||||||||||| Sbjct: 209 gactccggcgggggcggcgcgg 230
>gb|BC072023.1| Homo sapiens transcription factor 7 (T-cell specific, HMG-box), mRNA (cDNA clone MGC:88737 IMAGE:6292932), complete cds Length = 2974 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 200 gactccggcgggggcggcgcgg 221 |||||||||||||||||||||| Sbjct: 144 gactccggcgggggcggcgcgg 165
>ref|NM_132405.2| Drosophila melanogaster CG2887-RA (CG2887), mRNA Length = 1236 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 633 gtggtggtggcagtggcagtgg 654 |||||||||||||||||||||| Sbjct: 345 gtggtggtggcagtggcagtgg 366
>gb|AC023683.4| Drosophila melanogaster X BAC RP98-29G2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160194 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 633 gtggtggtggcagtggcagtgg 654 |||||||||||||||||||||| Sbjct: 13495 gtggtggtggcagtggcagtgg 13516
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 633 gtggtggtggcagtggcagtgg 654 |||||||||||||||||||||| Sbjct: 153351 gtggtggtggcagtggcagtgg 153372
>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE Length = 243542 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2384 ccaagcttgggcacttctgtgt 2405 |||||||||||||||||||||| Sbjct: 59183 ccaagcttgggcacttctgtgt 59162
>emb|AL954200.2| Pan troglodytes chromosome 22 clone PTB-419O23 map q21.1, complete sequence Length = 139459 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagt 652 |||||||||||||||||||||| Sbjct: 10807 tggtggtggtggcagtggcagt 10786
>gb|AY070804.1| Drosophila melanogaster AT19485 full length cDNA Length = 1252 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 633 gtggtggtggcagtggcagtgg 654 |||||||||||||||||||||| Sbjct: 345 gtggtggtggcagtggcagtgg 366
>gb|AC008608.7| Homo sapiens chromosome 5 clone CTB-113I20, complete sequence Length = 160672 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 200 gactccggcgggggcggcgcgg 221 |||||||||||||||||||||| Sbjct: 142801 gactccggcgggggcggcgcgg 142822
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 206 ggcgggggcggcgcggcggccg 227 |||||||||||||||||||||| Sbjct: 11652 ggcgggggcggcgcggcggccg 11631
>gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown, complete sequence Length = 136653 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagt 652 |||||||||||||||||||||| Sbjct: 751 tggtggtggtggcagtggcagt 772
>gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G18, complete sequence Length = 136653 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 631 tggtggtggtggcagtggcagt 652 |||||||||||||||||||||| Sbjct: 751 tggtggtggtggcagtggcagt 772
>gb|AC093639.5| Homo sapiens BAC clone RP11-315C24 from 2, complete sequence Length = 153053 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2099 tttaaaaatttactaagtaaaa 2120 |||||||||||||||||||||| Sbjct: 134280 tttaaaaatttactaagtaaaa 134259
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 206 ggcgggggcggcgcggcggccg 227 |||||||||||||||||||||| Sbjct: 102805 ggcgggggcggcgcggcggccg 102784
>dbj|BS000114.1| Pan troglodytes chromosome 22 clone:RP43-168A22, map 22, complete sequences Length = 173403 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagt 652 |||||||||||||||||||||| Sbjct: 126085 tggtggtggtggcagtggcagt 126064
>gb|AF220154.1|AF220154 Mus musculus neural-restrictive silencer factor (NRSF/REST) gene, promoter region Length = 4563 Score = 44.1 bits (22), Expect = 2.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagtggag 656 |||||||||||| ||||||||||||| Sbjct: 97 tggtggtggtggtagtggcagtggag 72
>dbj|AP001712.1| Homo sapiens genomic DNA, chromosome 21q, section 56/105 Length = 340000 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagt 652 |||||||||||||||||||||| Sbjct: 87930 tggtggtggtggcagtggcagt 87909
>gb|BC048769.1| Homo sapiens transcription factor 7 (T-cell specific, HMG-box), mRNA (cDNA clone MGC:47735 IMAGE:6063270), complete cds Length = 3047 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 200 gactccggcgggggcggcgcgg 221 |||||||||||||||||||||| Sbjct: 209 gactccggcgggggcggcgcgg 230
>gb|AF163776.1|AF163776 Homo sapiens TCF1 gene, partial cds Length = 1362 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 200 gactccggcgggggcggcgcgg 221 |||||||||||||||||||||| Sbjct: 1170 gactccggcgggggcggcgcgg 1191
>gb|AC141469.4| Mus musculus BAC clone RP24-439P5 from 5, complete sequence Length = 183468 Score = 44.1 bits (22), Expect = 2.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagtggag 656 |||||||||||| ||||||||||||| Sbjct: 69972 tggtggtggtggtagtggcagtggag 69947
>emb|AL928809.7| Mouse DNA sequence from clone RP23-435J5 on chromosome 2, complete sequence Length = 161521 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2167 caattttattaatgttcttgaa 2188 |||||||||||||||||||||| Sbjct: 25420 caattttattaatgttcttgaa 25441
>dbj|AP000466.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B140B9, complete sequence Length = 119580 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 631 tggtggtggtggcagtggcagt 652 |||||||||||||||||||||| Sbjct: 31207 tggtggtggtggcagtggcagt 31186 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 534,333,663 Number of extensions: 30537448 Number of successful extensions: 189722 Number of sequences better than 10.0: 79 Number of HSP's gapped: 189715 Number of HSP's successfully gapped: 136 Length of query: 2898 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2875 Effective length of database: 18,503,978,556 Effective search space: 53198938348500 Effective search space used: 53198938348500 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
