ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf75h18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK063462:Os11g0265500 | 72 | 1e-27 | 2 | AK073881:Os08g0293300 | 32 | 1.7 | 3 | AK068781:Os05g0372400 | 30 | 3.8 | 4 | AK120414:Os07g0249100 | 30 | 6.5 | 5 | AK066765:Os01g0158900 | 30 | 6.5 | 6 | AK066742:Os07g0249100 | 30 | 6.5 | 7 | AK059497:Os01g0158900 | 30 | 6.5 | 8 | AK109267:Os05g0544900 | 29 | 8.5 | 9 | AK070988:Os01g0719600 | 29 | 8.5 |
|---|
>AK063462:Os11g0265500 | Length = 84 Score = 71.6 bits (174), Expect(3) = 1e-27 Identities = 31/38 (81%), Positives = 33/38 (86%) Frame = +3 Query: 1017 LLREGCWINIHLTQPNRPVFEIRVHEGYGARWSHDGLK 1130 LLRE CW+NIHLTQP PV+EIRVHEGYGARWS DG K Sbjct: 28 LLRECCWMNIHLTQPYGPVYEIRVHEGYGARWSQDGSK 65 Score = 49.7 bits (117), Expect(3) = 1e-27 Identities = 20/25 (80%), Positives = 22/25 (88%) Frame = +1 Query: 940 SSDGWWGCLHGSDPKKNQLSSEVID 1014 SSDGWWG HGSD KKNQL+SE+ID Sbjct: 2 SSDGWWGSFHGSDVKKNQLASEIID 26 Score = 41.6 bits (96), Expect(3) = 1e-27 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +2 Query: 1169 QFIGFLEPYTPDGFLNGWKH 1228 +FIGFLEPY+P+GF GWKH Sbjct: 65 KFIGFLEPYSPEGFSRGWKH 84
>AK073881:Os08g0293300 | Length = 915 Score = 31.6 bits (70), Expect = 1.7 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -2 Query: 1412 PGFGKRIGSTGASYKLQLTPSGLSNDISLDLEQDIQHSF 1296 P GK + G Y QLT GL + S D + DI+H F Sbjct: 450 PRHGKTVQQLGQLYLRQLTTRGLVTEASADGDYDIRHFF 488
>AK068781:Os05g0372400 | Length = 342 Score = 30.4 bits (67), Expect = 3.8 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +2 Query: 914 GHWPNMFTGVVMGGGAASMEVILRRINFRPKSLTVVT*G 1030 G+ P M TG MGG AS + +N+R K +T++T G Sbjct: 161 GNIPIMVTGHSMGGAMASFCALDLVVNYRLKDVTLITFG 199
>AK120414:Os07g0249100 | Length = 882 Score = 29.6 bits (65), Expect = 6.5 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +1 Query: 40 TTDHLSSPPQPASPGVGAVSLSSAVGELLRLVLSSHVAAPDPALPLSRSY 189 T HLSS P+ P SS GELLRL+ ++ PD A +S ++ Sbjct: 26 TPRHLSSSSPPSQPP------SSPAGELLRLLSAAPTWTPDLARAVSSTF 69
>AK066765:Os01g0158900 | Length = 909 Score = 29.6 bits (65), Expect = 6.5 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +1 Query: 1303 CCMSCSRSKEMSFERPEGVSCNL*DAPVLPILFPKP-GCGAVVMHRQC 1443 C + C R +E P + C+L D P L +P CGA+V +C Sbjct: 659 CNLPCQRVREPPCSHPCPLPCHLNDCPPCKALVKRPCHCGAMVHAFEC 706
>AK066742:Os07g0249100 | Length = 882 Score = 29.6 bits (65), Expect = 6.5 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +1 Query: 40 TTDHLSSPPQPASPGVGAVSLSSAVGELLRLVLSSHVAAPDPALPLSRSY 189 T HLSS P+ P SS GELLRL+ ++ PD A +S ++ Sbjct: 26 TPRHLSSSSPPSQPP------SSPAGELLRLLSAAPTWTPDLARAVSSTF 69
>AK059497:Os01g0158900 | Length = 348 Score = 29.6 bits (65), Expect = 6.5 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +1 Query: 1303 CCMSCSRSKEMSFERPEGVSCNL*DAPVLPILFPKP-GCGAVVMHRQC 1443 C + C R +E P + C+L D P L +P CGA+V +C Sbjct: 98 CNLPCQRVREPPCSHPCPLPCHLNDCPPCKALVKRPCHCGAMVHAFEC 145
>AK109267:Os05g0544900 | Length = 297 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Frame = +1 Query: 904 DAARALAKHVHRSSDGWWGCLHGSDPKKN-----QLSSEVID 1014 D+ R + H+HR S+ W HGSD +K Q +E +D Sbjct: 96 DSGRLPSSHLHRQSESW--ATHGSDKEKEDEEVVQAKNEEVD 135
>AK070988:Os01g0719600 | Length = 142 Score = 29.3 bits (64), Expect = 8.5 Identities = 21/69 (30%), Positives = 29/69 (42%) Frame = +1 Query: 1300 LCCMSCSRSKEMSFERPEGVSCNL*DAPVLPILFPKPGCGAVVMHRQCRCVHLRRGEHCN 1479 +C S +E + ER VS L + L L G + H + + V LR HC Sbjct: 24 VCIHSVEDDEEEAIEREALVSSQLEELVKLKDLVG--GAKTLAFHLEPKTVELRVSMHCY 81 Query: 1480 SCAHQF*KH 1506 CA + KH Sbjct: 82 GCAKKVQKH 90 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 45,673,789 Number of extensions: 1042043 Number of successful extensions: 3398 Number of sequences better than 10.0: 9 Number of HSP's gapped: 3397 Number of HSP's successfully gapped: 11 Length of query: 548 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 442 Effective length of database: 11,155,509 Effective search space: 4930734978 Effective search space used: 4930734978 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
