| Clone Name | FLbaf75h18 |
|---|---|
| Clone Library Name | barley_pub |
>Q4IL82:INO80_GIBZE Putative DNA helicase INO80 - Gibberella zeae (Fusarium graminearum)| Length = 1904 Score = 34.7 bits (78), Expect = 1.2 Identities = 23/73 (31%), Positives = 34/73 (46%) Frame = -1 Query: 1155 KEPRNSQIPSNHHETIWHHNLHAHEFQKPAYWAVSDEYLSNSPHVTTVNDFGRKLILLRI 976 +E R+S+ P +HH HH+ H + PA AV+ E + S + N LR Sbjct: 23 EEDRDSR-PHHHHRHHHHHHHHRRDGDLPA-GAVAGEAATASSNAGGANAHQHSTFSLRS 80 Query: 975 TSMEAAPPPITTP 937 E PPP ++P Sbjct: 81 PKPEYRPPPFSSP 93
>O57476:CDC37_CHICK Hsp90 co-chaperone Cdc37 - Gallus gallus (Chicken)| Length = 393 Score = 32.7 bits (73), Expect = 4.6 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = -1 Query: 1188 SKNPMNCKSYVKEPRNSQIPSNHHETIWHHNLHAHEFQKPAYWAVSDEYLSNSPHV 1021 SK+ N K+ KE Q H + H F W S +YLS++PH+ Sbjct: 131 SKSVFNVKAEEKEETEEQKEQKHKTFVERHEKQIKHFGMLRRWDDSQKYLSDNPHL 186
>P48382:RFX5_HUMAN DNA-binding protein RFX5 - Homo sapiens (Human)| Length = 616 Score = 32.3 bits (72), Expect = 6.0 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +1 Query: 61 PPQPASPGVGAVSLSSAVGELLRLVLSSHVAAPDPALPL 177 PP P SP + A LSS ++ L LSS AP A+P+ Sbjct: 342 PPIPVSPPILAPRLSSGALKVATLPLSSRAGAPPAAVPI 380
>Q00174:LAMA_DROME Laminin subunit alpha precursor - Drosophila melanogaster (Fruit fly)| Length = 3712 Score = 32.3 bits (72), Expect = 6.0 Identities = 18/57 (31%), Positives = 23/57 (40%) Frame = +1 Query: 1315 CSRSKEMSFERPEGVSCNL*DAPVLPILFPKPGCGAVVMHRQCRCVHLRRGEHCNSC 1485 C KE + P CN A V+ GCG+V + C+C G CN C Sbjct: 661 CDSCKEGFYNFPSCEDCNCDPAGVIDKF---AGCGSVPVGELCKCKERVTGRICNEC 714
>Q9D2Q3:CJ088_MOUSE Uncharacterized protein C10orf88 homolog - Mus musculus (Mouse)| Length = 444 Score = 32.0 bits (71), Expect = 7.8 Identities = 14/62 (22%), Positives = 29/62 (46%) Frame = -2 Query: 1445 RHCLCMTTAPQPGFGKRIGSTGASYKLQLTPSGLSNDISLDLEQDIQHSFSLQAVRHSTE 1266 +H + + ++P P + ST ++ LTPS ++ ++ +++ Q S H Sbjct: 235 KHLMALQSSPSPAVLDKASSTPFPFRTGLTPSAITENLKALIDKSAQPSGEGNTTNHDEG 294 Query: 1265 HL 1260 HL Sbjct: 295 HL 296
>P34110:VPS35_YEAST Vacuolar protein sorting-associated protein 35 - Saccharomyces| cerevisiae (Baker's yeast) Length = 944 Score = 32.0 bits (71), Expect = 7.8 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = -1 Query: 507 TLCNPVVITSC*PPFNVLGSSTELSEVWFLNM*HKLHCIINPL 379 ++C P++I+ PP NV S T + EV+F + I++P+ Sbjct: 488 SICEPLIISRSGPPANVASSDTNVDEVFFNRHDEEESWILDPI 530 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 275,758,342 Number of extensions: 6046094 Number of successful extensions: 17367 Number of sequences better than 10.0: 6 Number of HSP's gapped: 17336 Number of HSP's successfully gapped: 6 Length of query: 548 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 430 Effective length of database: 68,319,629 Effective search space: 29377440470 Effective search space used: 29377440470 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)