No.
Definition
Score (bits)
E Value
1 emb|CT829845.1| Oryza sativa (indica cultivar-group) cDNA clone:...
309
2e-80
2 ref|NM_001074192.1| Oryza sativa (japonica cultivar-group) Os11g...
167
2e-37
3 dbj|AK063462.1| Oryza sativa (japonica cultivar-group) cDNA clon...
167
2e-37
4 gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome...
121
8e-24
5 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
121
8e-24
6 ref|NM_001074361.1| Oryza sativa (japonica cultivar-group) Os11g...
48
0.10
7 gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome...
48
0.10
8 ref|NM_001072789.1| Oryza sativa (japonica cultivar-group) Os12g...
46
0.40
9 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.40
10 emb|AL161612.13| Human DNA sequence from clone RP11-196P2 on chr...
46
0.40
11 gb|AC058784.17|AC058784 Homo sapiens chromosome 13 clone RP11-28...
46
0.40
12 dbj|AK068306.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.40
13 emb|BX649481.10| Zebrafish DNA sequence from clone CH211-103D13 ...
46
0.40
14 gb|AY563279.1| Alternaria mouchaccae major allergen alt a1 (alt ...
46
0.40
15 emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007...
46
0.40
16 emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494...
46
0.40
17 gb|AC166349.4| Mus musculus BAC clone RP24-192I21 from chromosom...
44
1.6
18 gb|AC096637.1| Homo sapiens chromosome 1 clone RP11-122M14, comp...
44
1.6
19 gb|AC159633.2| Mus musculus BAC clone RP24-159L15 from chromosom...
44
1.6
20 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
44
1.6
21 gb|AC108101.2| Homo sapiens chromosome 5 clone RP11-125H10, comp...
44
1.6
22 gb|AC092280.2| Homo sapiens chromosome 5 clone CTD-2028M21, comp...
44
1.6
23 gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, compl...
44
1.6
24 dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic D...
44
1.6
25 dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic D...
44
1.6
26 gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co...
44
1.6
27 gb|CP000479.1| Mycobacterium avium 104, complete genome
42
6.3
28 emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple...
42
6.3
29 gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
42
6.3
30 gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
42
6.3
31 gb|AY274075.1| Phoenicopterus ruber 16S ribosomal RNA gene, part...
42
6.3
32 ref|XM_451320.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A07216g ...
42
6.3
33 ref|XM_451321.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A07227g ...
42
6.3
34 gb|AF487263.1| Leptosphaeria maculans major facilitator superfam...
42
6.3
35 gb|AC122383.4| Mus musculus BAC clone RP23-479O8 from chromosome...
42
6.3
36 gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ...
42
6.3
37 gb|CP000088.1| Thermobifida fusca YX, complete genome
42
6.3
38 gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple...
42
6.3
39 gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 geno...
42
6.3
40 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
42
6.3
41 emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso...
42
6.3
42 gb|AC066613.7|AC066613 Homo sapiens chromosome 15 clone RP11-707...
42
6.3
43 gb|AF369378.1|AF369378 Mokola virus V635.S3 phosphoprotein (P) g...
42
6.3
44 gb|AF369377.1|AF369377 Mokola virus V628.S3 phosphoprotein (P) g...
42
6.3
45 gb|AF369376.1|AF369376 Mokola virus V552.S3 phosphoprotein (P) g...
42
6.3
46 gb|AF369375.1|AF369375 Mokola virus V550.S3 phosphoprotein (P) g...
42
6.3
47 gb|AF369374.1|AF369374 Mokola virus V547.S3 phosphoprotein (P) g...
42
6.3
48 emb|AL732631.4| Mouse DNA sequence from clone RP23-345P19 on chr...
42
6.3
49 gb|AC020891.8|AC020891 Homo sapiens chromosome 15 clone RP11-108...
42
6.3
50 gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge...
42
6.3
51 gb|AF049116.1| Mokola virus isolate V020 phosphoprotein (P) mRNA...
42
6.3
52 emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on ch...
42
6.3
>ref|NM_001074192.1 | Oryza sativa (japonica cultivar-group) Os11g0265500 (Os11g0265500)
mRNA, complete cds
Length = 1605
Score = 167 bits (84), Expect = 2e-37
Identities = 243/296 (82%)
Strand = Plus / Plus
Query: 577 gagatgttgcaagcagagacgatctcaaatgttcttcctgatatttcatcaatcgaagaa 636
|||||| |||| ||||||| ||||||| | |||||||||| |||||||||||| ||| ||
Sbjct: 813 gagatgctgcaggcagagatgatctcagaggttcttcctggtatttcatcaattgaacaa 872
Query: 637 ggtgtcaaagtttatagaaatttctacacagaggaaaaagagaactcttatggagtcttg 696
|| || ||| ||||| || ||||| || || ||||| || | || |||||||||||||
Sbjct: 873 ggagtgggagtatataggaaattctatacggaagaaaaggaaagcttttatggagtcttg 932
Query: 697 gcaatatctgtctcaaagccgcaaatccaaccttacataaccatgaccgagcttctttct 756
||||| ||||| |||||||| ||||||||||||| |||||| ||||||||| ||
Sbjct: 933 gcaatctctgtttcaaagccaactgctcaaccttacataatcatgacagagcttcttgct 992
Query: 757 ggattgggttacgatggattaggtagactccttggtctggcaaacacatcaggaacagtt 816
|| ||||||| |||||||| ||||||||||||||| ||| || || |||| ||||||
Sbjct: 993 ggcttgggttctgatggattgggtagactccttggtatggtgaaaactgcaggtacagtt 1052
Query: 817 ccagatggactacctcctccaaaatccgtgttgatatcatcttgtatgaaactaca 872
| |||||||||||||||||||| ||| || ||||||| ||||| ||||| |||||
Sbjct: 1053 caagatggactacctcctccaagatctgtactgatatcttcttgcatgaagctaca 1108
Score = 139 bits (70), Expect = 4e-29
Identities = 158/186 (84%), Gaps = 1/186 (0%)
Strand = Plus / Plus
Query: 939 gagtagtgatgggtggtggggctgcctccatggaagtgatcctaagaagaatcaactttc 998
|||||| ||||| ||||||||| || |||| ||||||||| ||||| || |||||| |
Sbjct: 1119 gagtagcgatggatggtggggcagcttccacggaagtgatgtaaagaaaaaccaacttgc 1178
Query: 999 gtccgaagtcattgaccg-ttgttacgtgagggctgttggataaatattcatctgacaca 1057
|||||| ||||||||| ||||||||||| |||||||||| ||||||||||| || ||
Sbjct: 1179 atccgaaatcattgaccacttgttacgtgaatgctgttggatgaatattcatcttactca 1238
Query: 1058 gcccaataggccggtttttgaaattcgtgtgcatgaaggttatggtgccagatggtctca 1117
||| || | || |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1239 accctatggtcctgtttatgaaatccgtgtgcatgaaggttatggtgccagatggtctca 1298
Query: 1118 tgatgg 1123
|||||
Sbjct: 1299 agatgg 1304
Score = 103 bits (52), Expect = 2e-18
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 445 gctggatccaagaacgttgaagggaggttagcagctggtaattacaaccggattacacaa 504
|||||| |||| || |||||||||||||| |||||||||||||||||||||||| || ||
Sbjct: 391 gctggaaccaaaaaagttgaagggaggttggcagctggtaattacaaccggattgcagaa 450
Query: 505 ggttctttgttgctcttcaataaatgcctcttgctt 540
||||||||| | || |||||||| || |||||||||
Sbjct: 451 ggttctttgcttcttttcaataagtgtctcttgctt 486
Score = 65.9 bits (33), Expect = 4e-07
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 124 ctccgcttagtcctctcatcccacgtcgccgccccggacccggccctccctctgtcccgc 183
|||||||| ||||| || |||||| ||||||| || |||||||||||||| || ||||
Sbjct: 122 ctccgcttcgtcctgtcctcccacctcgccgcgcctgacccggccctcccgctctcccct 181
Query: 184 tcctattgctcccgtctcctc 204
||||| |||||||| ||||||
Sbjct: 182 tcctactgctcccgcctcctc 202
>dbj|AK063462.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H03, full
insert sequence
Length = 1606
Score = 167 bits (84), Expect = 2e-37
Identities = 243/296 (82%)
Strand = Plus / Plus
Query: 577 gagatgttgcaagcagagacgatctcaaatgttcttcctgatatttcatcaatcgaagaa 636
|||||| |||| ||||||| ||||||| | |||||||||| |||||||||||| ||| ||
Sbjct: 813 gagatgctgcaggcagagatgatctcagaggttcttcctggtatttcatcaattgaacaa 872
Query: 637 ggtgtcaaagtttatagaaatttctacacagaggaaaaagagaactcttatggagtcttg 696
|| || ||| ||||| || ||||| || || ||||| || | || |||||||||||||
Sbjct: 873 ggagtgggagtatataggaaattctatacggaagaaaaggaaagcttttatggagtcttg 932
Query: 697 gcaatatctgtctcaaagccgcaaatccaaccttacataaccatgaccgagcttctttct 756
||||| ||||| |||||||| ||||||||||||| |||||| ||||||||| ||
Sbjct: 933 gcaatctctgtttcaaagccaactgctcaaccttacataatcatgacagagcttcttgct 992
Query: 757 ggattgggttacgatggattaggtagactccttggtctggcaaacacatcaggaacagtt 816
|| ||||||| |||||||| ||||||||||||||| ||| || || |||| ||||||
Sbjct: 993 ggcttgggttctgatggattgggtagactccttggtatggtgaaaactgcaggtacagtt 1052
Query: 817 ccagatggactacctcctccaaaatccgtgttgatatcatcttgtatgaaactaca 872
| |||||||||||||||||||| ||| || ||||||| ||||| ||||| |||||
Sbjct: 1053 caagatggactacctcctccaagatctgtactgatatcttcttgcatgaagctaca 1108
Score = 139 bits (70), Expect = 4e-29
Identities = 158/186 (84%), Gaps = 1/186 (0%)
Strand = Plus / Plus
Query: 939 gagtagtgatgggtggtggggctgcctccatggaagtgatcctaagaagaatcaactttc 998
|||||| ||||| ||||||||| || |||| ||||||||| ||||| || |||||| |
Sbjct: 1119 gagtagcgatggatggtggggcagcttccacggaagtgatgtaaagaaaaaccaacttgc 1178
Query: 999 gtccgaagtcattgaccg-ttgttacgtgagggctgttggataaatattcatctgacaca 1057
|||||| ||||||||| ||||||||||| |||||||||| ||||||||||| || ||
Sbjct: 1179 atccgaaatcattgaccacttgttacgtgaatgctgttggatgaatattcatcttactca 1238
Query: 1058 gcccaataggccggtttttgaaattcgtgtgcatgaaggttatggtgccagatggtctca 1117
||| || | || |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1239 accctatggtcctgtttatgaaatccgtgtgcatgaaggttatggtgccagatggtctca 1298
Query: 1118 tgatgg 1123
|||||
Sbjct: 1299 agatgg 1304
Score = 103 bits (52), Expect = 2e-18
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 445 gctggatccaagaacgttgaagggaggttagcagctggtaattacaaccggattacacaa 504
|||||| |||| || |||||||||||||| |||||||||||||||||||||||| || ||
Sbjct: 391 gctggaaccaaaaaagttgaagggaggttggcagctggtaattacaaccggattgcagaa 450
Query: 505 ggttctttgttgctcttcaataaatgcctcttgctt 540
||||||||| | || |||||||| || |||||||||
Sbjct: 451 ggttctttgcttcttttcaataagtgtctcttgctt 486
Score = 65.9 bits (33), Expect = 4e-07
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 124 ctccgcttagtcctctcatcccacgtcgccgccccggacccggccctccctctgtcccgc 183
|||||||| ||||| || |||||| ||||||| || |||||||||||||| || ||||
Sbjct: 122 ctccgcttcgtcctgtcctcccacctcgccgcgcctgacccggccctcccgctctcccct 181
Query: 184 tcctattgctcccgtctcctc 204
||||| |||||||| ||||||
Sbjct: 182 tcctactgctcccgcctcctc 202
>gb|AC138197.3 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0055D24 map C535, complete sequence
Length = 174759
Score = 121 bits (61), Expect = 8e-24
Identities = 131/153 (85%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 982 aagaagaatcaactttcgtccgaagtcattgaccg-ttgttacgtgagggctgttggata 1040
||||| || |||||| | |||||| ||||||||| ||||||||||| ||||||||||
Sbjct: 36390 aagaaaaaccaacttgcatccgaaatcattgaccacttgttacgtgaatgctgttggatg 36449
Query: 1041 aatattcatctgacacagcccaataggccggtttttgaaattcgtgtgcatgaaggttat 1100
||||||||||| || || ||| || | || |||| |||||| ||||||||||||||||||
Sbjct: 36450 aatattcatcttactcaaccctatggtcctgtttatgaaatccgtgtgcatgaaggttat 36509
Query: 1101 ggtgccagatggtctcatgatggtttgaaggta 1133
||||||||||||||||| ||||| | |||||||
Sbjct: 36510 ggtgccagatggtctcaagatggctcgaaggta 36542
Score = 117 bits (59), Expect = 1e-22
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 890 gttgttctttaactgatgctgcaagggcattggccaaacatgttcacaggagtagtgatg 949
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 36211 gttgttctctaactgatgctgcaagggcaatggccaaacatgttcacaggagtagcgatg 36270
Query: 950 ggtggtggggctgcctccatggaagtg 976
| ||||||||| || |||| |||||||
Sbjct: 36271 gatggtggggcagcttccacggaagtg 36297
Score = 81.8 bits (41), Expect = 7e-12
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 760 ttgggttacgatggattaggtagactccttggtctggcaaacacatcaggaacagttcca 819
||||||| |||||||| ||||||||||||||| ||| || || |||| ||||||| |
Sbjct: 35947 ttgggttctgatggattgggtagactccttggtatggtgaaaactgcaggtacagttcaa 36006
Query: 820 gatggactacctcctccaaaatccgtgttgatatcatcttgtatgaaactaca 872
||||||||||||||||||| ||| || ||||||| ||||| ||||| |||||
Sbjct: 36007 gatggactacctcctccaagatctgtactgatatcttcttgcatgaagctaca 36059
Score = 73.8 bits (37), Expect = 2e-09
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 388 tatgatgcagtggagtttgtgctacatgttcaagaaccatacttcactcaact 440
|||||||| |||||||||| | | |||||||||||||||||||||||||||||
Sbjct: 32477 tatgatgctgtggagtttgagttgcatgttcaagaaccatacttcactcaact 32529
Score = 69.9 bits (35), Expect = 3e-08
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 445 gctggatccaagaacgttgaagggaggttagcagctggtaattacaaccgg 495
|||||| |||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 33651 gctggaaccaaaaaagttgaagggaggttggcagctggtaattacaaccgg 33701
Score = 65.9 bits (33), Expect = 4e-07
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 124 ctccgcttagtcctctcatcccacgtcgccgccccggacccggccctccctctgtcccgc 183
|||||||| ||||| || |||||| ||||||| || |||||||||||||| || ||||
Sbjct: 31670 ctccgcttcgtcctgtcctcccacctcgccgcgcctgacccggccctcccgctctcccct 31729
Query: 184 tcctattgctcccgtctcctc 204
||||| |||||||| ||||||
Sbjct: 31730 tcctactgctcccgcctcctc 31750
Score = 61.9 bits (31), Expect = 7e-06
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 577 gagatgttgcaagcagagacgatctcaaatgttcttcctgatatttcatcaatcgaagaa 636
|||||| |||| ||||||| ||||||| | |||||||||| |||||||||||| ||| ||
Sbjct: 34581 gagatgctgcaggcagagatgatctcagaggttcttcctggtatttcatcaattgaacaa 34640
Query: 637 ggt 639
|||
Sbjct: 34641 ggt 34643
Score = 52.0 bits (26), Expect = 0.007
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 684 ttatggagtcttggcaatatctgtctcaaagccgcaaatccaaccttacataaccatgac 743
|||||||||||||||||| ||||| |||||||| ||||||||||||| ||||||
Sbjct: 35466 ttatggagtcttggcaatctctgtttcaaagccaactgctcaaccttacataatcatgac 35525
Query: 744 cgagcttctt 753
|||||||||
Sbjct: 35526 agagcttctt 35535
Score = 42.1 bits (21), Expect = 6.3
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 1169 cagttcattggattcttggagccttacactccagatggctt 1209
||||| ||||||||||||||||| || | |||||| |||||
Sbjct: 37476 cagtttattggattcttggagccgtatagtccagagggctt 37516
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
Length = 28386948
Score = 121 bits (61), Expect = 8e-24
Identities = 131/153 (85%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 982 aagaagaatcaactttcgtccgaagtcattgaccg-ttgttacgtgagggctgttggata 1040
||||| || |||||| | |||||| ||||||||| ||||||||||| ||||||||||
Sbjct: 8981837 aagaaaaaccaacttgcatccgaaatcattgaccacttgttacgtgaatgctgttggatg 8981778
Query: 1041 aatattcatctgacacagcccaataggccggtttttgaaattcgtgtgcatgaaggttat 1100
||||||||||| || || ||| || | || |||| |||||| ||||||||||||||||||
Sbjct: 8981777 aatattcatcttactcaaccctatggtcctgtttatgaaatccgtgtgcatgaaggttat 8981718
Query: 1101 ggtgccagatggtctcatgatggtttgaaggta 1133
||||||||||||||||| ||||| | |||||||
Sbjct: 8981717 ggtgccagatggtctcaagatggctcgaaggta 8981685
Score = 117 bits (59), Expect = 1e-22
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 890 gttgttctttaactgatgctgcaagggcattggccaaacatgttcacaggagtagtgatg 949
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 8982016 gttgttctctaactgatgctgcaagggcaatggccaaacatgttcacaggagtagcgatg 8981957
Query: 950 ggtggtggggctgcctccatggaagtg 976
| ||||||||| || |||| |||||||
Sbjct: 8981956 gatggtggggcagcttccacggaagtg 8981930
Score = 81.8 bits (41), Expect = 7e-12
Identities = 95/113 (84%)
Strand = Plus / Minus
Query: 760 ttgggttacgatggattaggtagactccttggtctggcaaacacatcaggaacagttcca 819
||||||| |||||||| ||||||||||||||| ||| || || |||| ||||||| |
Sbjct: 8982280 ttgggttctgatggattgggtagactccttggtatggtgaaaactgcaggtacagttcaa 8982221
Query: 820 gatggactacctcctccaaaatccgtgttgatatcatcttgtatgaaactaca 872
||||||||||||||||||| ||| || ||||||| ||||| ||||| |||||
Sbjct: 8982220 gatggactacctcctccaagatctgtactgatatcttcttgcatgaagctaca 8982168
Score = 73.8 bits (37), Expect = 2e-09
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 388 tatgatgcagtggagtttgtgctacatgttcaagaaccatacttcactcaact 440
|||||||| |||||||||| | | |||||||||||||||||||||||||||||
Sbjct: 8985750 tatgatgctgtggagtttgagttgcatgttcaagaaccatacttcactcaact 8985698
Score = 69.9 bits (35), Expect = 3e-08
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 445 gctggatccaagaacgttgaagggaggttagcagctggtaattacaaccgg 495
|||||| |||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 8984576 gctggaaccaaaaaagttgaagggaggttggcagctggtaattacaaccgg 8984526
Score = 65.9 bits (33), Expect = 4e-07
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 124 ctccgcttagtcctctcatcccacgtcgccgccccggacccggccctccctctgtcccgc 183
|||||||| ||||| || |||||| ||||||| || |||||||||||||| || ||||
Sbjct: 8986557 ctccgcttcgtcctgtcctcccacctcgccgcgcctgacccggccctcccgctctcccct 8986498
Query: 184 tcctattgctcccgtctcctc 204
||||| |||||||| ||||||
Sbjct: 8986497 tcctactgctcccgcctcctc 8986477
Score = 61.9 bits (31), Expect = 7e-06
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 577 gagatgttgcaagcagagacgatctcaaatgttcttcctgatatttcatcaatcgaagaa 636
|||||| |||| ||||||| ||||||| | |||||||||| |||||||||||| ||| ||
Sbjct: 8983646 gagatgctgcaggcagagatgatctcagaggttcttcctggtatttcatcaattgaacaa 8983587
Query: 637 ggt 639
|||
Sbjct: 8983586 ggt 8983584
Score = 52.0 bits (26), Expect = 0.007
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 684 ttatggagtcttggcaatatctgtctcaaagccgcaaatccaaccttacataaccatgac 743
|||||||||||||||||| ||||| |||||||| ||||||||||||| ||||||
Sbjct: 8982761 ttatggagtcttggcaatctctgtttcaaagccaactgctcaaccttacataatcatgac 8982702
Query: 744 cgagcttctt 753
|||||||||
Sbjct: 8982701 agagcttctt 8982692
Score = 48.1 bits (24), Expect = 0.10
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 54 ctcctcgccgccgcagccggcgtcgccg 81
|||||||||||||| |||||||||||||
Sbjct: 14383024 ctcctcgccgccgccgccggcgtcgccg 14383051
Score = 42.1 bits (21), Expect = 6.3
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 1169 cagttcattggattcttggagccttacactccagatggctt 1209
||||| ||||||||||||||||| || | |||||| |||||
Sbjct: 8980751 cagtttattggattcttggagccgtatagtccagagggctt 8980711
>gb|AY274075.1 | Phoenicopterus ruber 16S ribosomal RNA gene, partial sequence;
tRNA-Leu gene, complete sequence; NADH dehydrogenase
subunit 1 (ND1) gene, complete cds; tRNA-Ile, tRNA-Gln,
and tRNA-Met genes, complete sequence; NADH
dehydrogenase subunit 2 (ND2) gene, complete cds;
tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr
genes, complete sequence; and cytochrome oxidase subunit
I (COI) gene, partial cds; mitochondrial genes for
mitochondrial products
Length = 2857
Score = 42.1 bits (21), Expect = 6.3
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 329 agagggaaggggagtgggagg 349
|||||||||||||||||||||
Sbjct: 531 agagggaaggggagtgggagg 511
>gb|AF487263.1 | Leptosphaeria maculans major facilitator superfamily (mfs1), elongation
factor 1 beta subunit (ef1B), heat shock protein 78
(hsp78), mismatch repair protein 5 (msh5), Zn-II 2Cys6
regulatory protein (znr1), monomodular non-ribosomal
peptide synthetase (maa1), putative endo-exoxylanase
(xyl38), and protein kinase C (pkc1) genes, complete cds;
and unknown gene
Length = 38093
Score = 42.1 bits (21), Expect = 6.3
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 329 agagggaaggggagtgggagg 349
|||||||||||||||||||||
Sbjct: 32353 agagggaaggggagtgggagg 32333
>emb|AL607041.18 | Mouse DNA sequence from clone RP23-434K11 on chromosome 11, complete
sequence
Length = 198761
Score = 42.1 bits (21), Expect = 6.3
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1136 tgactgttccttggctccttg 1156
|||||||||||||||||||||
Sbjct: 44592 tgactgttccttggctccttg 44572
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 291,495,820
Number of extensions: 15481873
Number of successful extensions: 356156
Number of sequences better than 10.0: 52
Number of HSP's gapped: 356154
Number of HSP's successfully gapped: 82
Length of query: 1644
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1621
Effective length of database: 18,503,978,556
Effective search space: 29994949239276
Effective search space used: 29994949239276
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)