| Clone Name | FLbaf72a11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT831972.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113A16, full insert sequence Length = 1107 Score = 486 bits (245), Expect = e-134 Identities = 437/501 (87%) Strand = Plus / Plus Query: 64 gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 123 ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || Sbjct: 175 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 234 Query: 124 cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 183 ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 235 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 294 Query: 184 catctcctcccgcaagcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggg 243 |||||||||||||||| |||| ||||| ||||||||||| | |||||||||||| ||||| Sbjct: 295 catctcctcccgcaagaagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggg 354 Query: 244 gatcactgttgtgggggccgtctgccacgtctccaacgccgaacagcgcaagcacctcat 303 |||||| || || |||| |||||||| ||||||| | | || ||||||||| ||||||| Sbjct: 355 gatcaccgtcgtcggggtggtctgccatgtctccatcccggagcagcgcaagaacctcat 414 Query: 304 cgacacggccgtcaagaattttggacatattgatattgttgtctccaatgctgctgcaaa 363 ||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| || Sbjct: 415 cgacacggcggtcaagaattttgggcatatcgacatagttgtctccaatgctgctgccaa 474 Query: 364 tccttctgtggatagcatactagagatgaaagaaccagttcttgacaagctatgggatat 423 |||||| || |||| |||| |||| |||||||| || | |||||||| ||||||||||| Sbjct: 475 tccttccgtagataacatattagaaatgaaagagcctatccttgacaaactatgggatat 534 Query: 424 taatgtcaaagcatctattcttctactgcaggacgctgcaccacatttgaggaagggatc 483 |||||| || |||||||||||||| || ||||| ||||| || ||||| |||||||||| Sbjct: 535 taatgttaaggcatctattcttcttcttcaggatgctgctgcatatttgcggaagggatc 594 Query: 484 atctgtgataataatttcttcaattgctgactataatcctgaagcagctttatcgatgta 543 ||| |||||| | |||||||||||| ||| ||||||||| ||| |||| || |||||||| Sbjct: 595 atccgtgatattgatttcttcaattactggctataatccagaaccagcattgtcgatgta 654 Query: 544 tggtgttacaaagaccgccct 564 || ||||||||| || ||||| Sbjct: 655 tgctgttacaaaaactgccct 675 Score = 159 bits (80), Expect = 2e-35 Identities = 119/132 (90%) Strand = Plus / Plus Query: 583 aaatgagctcatcgagaggagcatacttaagagattgggtagcgtggaagacatggcttc 642 ||||||||| || || ||||||| ||||||||||||||||| ||||||||||| ||| | Sbjct: 796 aaatgagcttattgacaggagcacacttaagagattgggtactgtggaagacatcgctgc 855 Query: 643 agccgccgctttcctggcatccgacgatgcatccttcattacagctgaaacaattgttgt 702 |||||| |||||| ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 856 agccgcagctttcttggcatcagacgatgcatcattcattacagctgaaactattgttgt 915 Query: 703 tgctggaggaac 714 |||||||||||| Sbjct: 916 tgctggaggaac 927
>emb|CT831971.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA022G17, full insert sequence Length = 712 Score = 486 bits (245), Expect = e-134 Identities = 437/501 (87%) Strand = Plus / Plus Query: 64 gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 123 ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || Sbjct: 198 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 257 Query: 124 cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 183 ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 258 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 317 Query: 184 catctcctcccgcaagcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggg 243 |||||||||||||||| |||| ||||| ||||||||||| | |||||||||||| ||||| Sbjct: 318 catctcctcccgcaagaagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggg 377 Query: 244 gatcactgttgtgggggccgtctgccacgtctccaacgccgaacagcgcaagcacctcat 303 |||||| || || |||| |||||||| ||||||| | | || ||||||||| ||||||| Sbjct: 378 gatcaccgtcgtcggggtggtctgccatgtctccatcccggagcagcgcaagaacctcat 437 Query: 304 cgacacggccgtcaagaattttggacatattgatattgttgtctccaatgctgctgcaaa 363 ||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| || Sbjct: 438 cgacacggcggtcaagaattttgggcatatcgacatagttgtctccaatgctgctgccaa 497 Query: 364 tccttctgtggatagcatactagagatgaaagaaccagttcttgacaagctatgggatat 423 |||||| || |||| |||| |||| |||||||| || | |||||||| ||||||||||| Sbjct: 498 tccttccgtagataacatattagaaatgaaagagcctatccttgacaaactatgggatat 557 Query: 424 taatgtcaaagcatctattcttctactgcaggacgctgcaccacatttgaggaagggatc 483 |||||| || |||||||||||||| || ||||| ||||| || ||||| |||||||||| Sbjct: 558 taatgttaaggcatctattcttcttcttcaggatgctgctgcatatttgcggaagggatc 617 Query: 484 atctgtgataataatttcttcaattgctgactataatcctgaagcagctttatcgatgta 543 ||| |||||| | |||||||||||| ||| ||||||||| ||| |||| || |||||||| Sbjct: 618 atccgtgatattgatttcttcaattactggctataatccagaaccagcattgtcgatgta 677 Query: 544 tggtgttacaaagaccgccct 564 || ||||||||| || ||||| Sbjct: 678 tgctgttacaaaaactgccct 698
>ref|NM_001069165.1| Oryza sativa (japonica cultivar-group) Os09g0133200 (Os09g0133200) mRNA, complete cds Length = 1121 Score = 486 bits (245), Expect = e-134 Identities = 437/501 (87%) Strand = Plus / Plus Query: 64 gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 123 ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || Sbjct: 169 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 228 Query: 124 cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 183 ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 229 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 288 Query: 184 catctcctcccgcaagcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggg 243 |||||||||||||||| |||| ||||| ||||||||||| | |||||||||||| ||||| Sbjct: 289 catctcctcccgcaagaagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggg 348 Query: 244 gatcactgttgtgggggccgtctgccacgtctccaacgccgaacagcgcaagcacctcat 303 |||||| || || |||| |||||||| ||||||| | | || ||||||||| ||||||| Sbjct: 349 gatcaccgtcgtcggggtggtctgccatgtctccatcccggagcagcgcaagaacctcat 408 Query: 304 cgacacggccgtcaagaattttggacatattgatattgttgtctccaatgctgctgcaaa 363 ||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| || Sbjct: 409 cgacacggcggtcaagaattttgggcatatcgacatagttgtctccaatgctgctgccaa 468 Query: 364 tccttctgtggatagcatactagagatgaaagaaccagttcttgacaagctatgggatat 423 |||||| || |||| |||| |||| |||||||| || | |||||||| ||||||||||| Sbjct: 469 tccttccgtagataacatattagaaatgaaagagcctatccttgacaaactatgggatat 528 Query: 424 taatgtcaaagcatctattcttctactgcaggacgctgcaccacatttgaggaagggatc 483 |||||| || |||||||||||||| || ||||| ||||| || ||||| |||||||||| Sbjct: 529 taatgttaaggcatctattcttcttcttcaggatgctgctgcatatttgcggaagggatc 588 Query: 484 atctgtgataataatttcttcaattgctgactataatcctgaagcagctttatcgatgta 543 ||| |||||| | |||||||||||| ||| ||||||||| ||| |||| || |||||||| Sbjct: 589 atccgtgatattgatttcttcaattactggctataatccagaaccagcattgtcgatgta 648 Query: 544 tggtgttacaaagaccgccct 564 || ||||||||| || ||||| Sbjct: 649 tgctgttacaaaaactgccct 669 Score = 167 bits (84), Expect = 9e-38 Identities = 120/132 (90%) Strand = Plus / Plus Query: 583 aaatgagctcatcgagaggagcatacttaagagattgggtagcgtggaagacatggcttc 642 ||||||||| || || ||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 790 aaatgagcttattgacaggagcacacttaagagattgggtactgtggaagacatggctgc 849 Query: 643 agccgccgctttcctggcatccgacgatgcatccttcattacagctgaaacaattgttgt 702 |||||| |||||| ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 850 agccgcagctttcttggcatcagacgatgcatcattcattacagctgaaactattgttgt 909 Query: 703 tgctggaggaac 714 |||||||||||| Sbjct: 910 tgctggaggaac 921
>dbj|AK109426.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E02, full insert sequence Length = 1013 Score = 486 bits (245), Expect = e-134 Identities = 437/501 (87%) Strand = Plus / Plus Query: 64 gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 123 ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || Sbjct: 81 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 140 Query: 124 cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 183 ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 141 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 200 Query: 184 catctcctcccgcaagcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggg 243 |||||||||||||||| |||| ||||| ||||||||||| | |||||||||||| ||||| Sbjct: 201 catctcctcccgcaagaagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggg 260 Query: 244 gatcactgttgtgggggccgtctgccacgtctccaacgccgaacagcgcaagcacctcat 303 |||||| || || |||| |||||||| ||||||| | | || ||||||||| ||||||| Sbjct: 261 gatcaccgtcgtcggggtggtctgccatgtctccatcccggagcagcgcaagaacctcat 320 Query: 304 cgacacggccgtcaagaattttggacatattgatattgttgtctccaatgctgctgcaaa 363 ||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| || Sbjct: 321 cgacacggcggtcaagaattttgggcatatcgacatagttgtctccaatgctgctgccaa 380 Query: 364 tccttctgtggatagcatactagagatgaaagaaccagttcttgacaagctatgggatat 423 |||||| || |||| |||| |||| |||||||| || | |||||||| ||||||||||| Sbjct: 381 tccttccgtagataacatattagaaatgaaagagcctatccttgacaaactatgggatat 440 Query: 424 taatgtcaaagcatctattcttctactgcaggacgctgcaccacatttgaggaagggatc 483 |||||| || |||||||||||||| || ||||| ||||| || ||||| |||||||||| Sbjct: 441 taatgttaaggcatctattcttcttcttcaggatgctgctgcatatttgcggaagggatc 500 Query: 484 atctgtgataataatttcttcaattgctgactataatcctgaagcagctttatcgatgta 543 ||| |||||| | |||||||||||| ||| ||||||||| ||| |||| || |||||||| Sbjct: 501 atccgtgatattgatttcttcaattactggctataatccagaaccagcattgtcgatgta 560 Query: 544 tggtgttacaaagaccgccct 564 || ||||||||| || ||||| Sbjct: 561 tgctgttacaaaaactgccct 581 Score = 167 bits (84), Expect = 9e-38 Identities = 120/132 (90%) Strand = Plus / Plus Query: 583 aaatgagctcatcgagaggagcatacttaagagattgggtagcgtggaagacatggcttc 642 ||||||||| || || ||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 702 aaatgagcttattgacaggagcacacttaagagattgggtactgtggaagacatggctgc 761 Query: 643 agccgccgctttcctggcatccgacgatgcatccttcattacagctgaaacaattgttgt 702 |||||| |||||| ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 762 agccgcagctttcttggcatcagacgatgcatcattcattacagctgaaactattgttgt 821 Query: 703 tgctggaggaac 714 |||||||||||| Sbjct: 822 tgctggaggaac 833
>dbj|AK073545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041K02, full insert sequence Length = 1127 Score = 486 bits (245), Expect = e-134 Identities = 437/501 (87%) Strand = Plus / Plus Query: 64 gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 123 ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || Sbjct: 173 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 232 Query: 124 cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 183 ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 233 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 292 Query: 184 catctcctcccgcaagcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggg 243 |||||||||||||||| |||| ||||| ||||||||||| | |||||||||||| ||||| Sbjct: 293 catctcctcccgcaagaagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggg 352 Query: 244 gatcactgttgtgggggccgtctgccacgtctccaacgccgaacagcgcaagcacctcat 303 |||||| || || |||| |||||||| ||||||| | | || ||||||||| ||||||| Sbjct: 353 gatcaccgtcgtcggggtggtctgccatgtctccatcccggagcagcgcaagaacctcat 412 Query: 304 cgacacggccgtcaagaattttggacatattgatattgttgtctccaatgctgctgcaaa 363 ||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| || Sbjct: 413 cgacacggcggtcaagaattttgggcatatcgacatagttgtctccaatgctgctgccaa 472 Query: 364 tccttctgtggatagcatactagagatgaaagaaccagttcttgacaagctatgggatat 423 |||||| || |||| |||| |||| |||||||| || | |||||||| ||||||||||| Sbjct: 473 tccttccgtagataacatattagaaatgaaagagcctatccttgacaaactatgggatat 532 Query: 424 taatgtcaaagcatctattcttctactgcaggacgctgcaccacatttgaggaagggatc 483 |||||| || |||||||||||||| || ||||| ||||| || ||||| |||||||||| Sbjct: 533 taatgttaaggcatctattcttcttcttcaggatgctgctgcatatttgcggaagggatc 592 Query: 484 atctgtgataataatttcttcaattgctgactataatcctgaagcagctttatcgatgta 543 ||| |||||| | |||||||||||| ||| ||||||||| ||| |||| || |||||||| Sbjct: 593 atccgtgatattgatttcttcaattactggctataatccagaaccagcattgtcgatgta 652 Query: 544 tggtgttacaaagaccgccct 564 || ||||||||| || ||||| Sbjct: 653 tgctgttacaaaaactgccct 673 Score = 167 bits (84), Expect = 9e-38 Identities = 120/132 (90%) Strand = Plus / Plus Query: 583 aaatgagctcatcgagaggagcatacttaagagattgggtagcgtggaagacatggcttc 642 ||||||||| || || ||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 794 aaatgagcttattgacaggagcacacttaagagattgggtactgtggaagacatggctgc 853 Query: 643 agccgccgctttcctggcatccgacgatgcatccttcattacagctgaaacaattgttgt 702 |||||| |||||| ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 854 agccgcagctttcttggcatcagacgatgcatcattcattacagctgaaactattgttgt 913 Query: 703 tgctggaggaac 714 |||||||||||| Sbjct: 914 tgctggaggaac 925
>gb|AY105662.1| Zea mays PCO112379 mRNA sequence Length = 1142 Score = 402 bits (203), Expect = e-109 Identities = 386/447 (86%) Strand = Plus / Plus Query: 66 cggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttcca 125 |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 196 cggcgatggatgtcaagtgccggcgtctggaggggaaggtggccatcgtgacggcgtcca 255 Query: 126 cgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgtca 185 || ||| ||||| ||||||||||||||||||||||| | |||||| ||||| ||||||| Sbjct: 256 cgatggggatcggcctcgccatcgccgagcgcctcggtctggagggcgccgccgtcgtca 315 Query: 186 tctcctcccgcaagcagaaaaacgtggacgaggcggtggagggcctcagggcaaagggga 245 ||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||| | Sbjct: 316 tctcctcccgcaagcagaagaacgtgaacgaggcggtggaggggctcagggccaagggta 375 Query: 246 tcactgttgtgggggccgtctgccacgtctccaacgccgaacagcgcaagcacctcatcg 305 |||| | || || |||||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 376 tcaccgcggttggtgccgtctgccacgtctccgacgcacagcagcgcaagagcctcatcg 435 Query: 306 acacggccgtcaagaattttggacatattgatattgttgtctccaatgctgctgcaaatc 365 | ||||||||||||| ||||| || || |||||| |||||||||||||||| ||||||| Sbjct: 436 agacggccgtcaagagctttgggcacatagatattcttgtctccaatgctgccgcaaatc 495 Query: 366 cttctgtggatagcatactagagatgaaagaaccagttcttgacaagctatgggatatta 425 ||||||| ||||||||||| || |||||||| | ||||| || ||||| |||||||||| Sbjct: 496 cttctgtagatagcatacttgaaatgaaagagtctgttctcgataagctgtgggatatta 555 Query: 426 atgtcaaagcatctattcttctactgcaggacgctgcaccacatttgaggaagggatcat 485 | ||||| || ||||| ||||| | ||||| ||||| || || | ||||||| |||| Sbjct: 556 acgtcaaggcttctatccttcttattcaggatgctgctcctcacctacggaaggggtcat 615 Query: 486 ctgtgataataatttcttcaattgctg 512 ||||||| || |||||||||||||||| Sbjct: 616 ctgtgattattatttcttcaattgctg 642 Score = 97.6 bits (49), Expect = 7e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 595 cgagaggagcatacttaagagattgggtagcgtggaagacatggcttcagccgccgcttt 654 |||||||| || |||||||||||||||| ||||||||||||||| | || || ||||| Sbjct: 827 cgagaggaccaagcttaagagattgggtactgtggaagacatggctgcggctgcggcttt 886 Query: 655 cctggcatccgacgatgcatccttcattacagctgaaacaattgttgttgctggagg 711 ||||| || ||||| ||||| | |||||| |||||||| ||||||||||||||||| Sbjct: 887 tctggcgtctgacgacgcatcatacattacggctgaaaccattgttgttgctggagg 943
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 190 bits (96), Expect = 6e-45 Identities = 126/136 (92%) Strand = Plus / Minus Query: 64 gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 123 ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || Sbjct: 2463721 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 2463662 Query: 124 cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 183 ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 2463661 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 2463602 Query: 184 catctcctcccgcaag 199 |||||||||||||||| Sbjct: 2463601 catctcctcccgcaag 2463586 Score = 167 bits (84), Expect = 9e-38 Identities = 120/132 (90%) Strand = Plus / Minus Query: 583 aaatgagctcatcgagaggagcatacttaagagattgggtagcgtggaagacatggcttc 642 ||||||||| || || ||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 2459491 aaatgagcttattgacaggagcacacttaagagattgggtactgtggaagacatggctgc 2459432 Query: 643 agccgccgctttcctggcatccgacgatgcatccttcattacagctgaaacaattgttgt 702 |||||| |||||| ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 2459431 agccgcagctttcttggcatcagacgatgcatcattcattacagctgaaactattgttgt 2459372 Query: 703 tgctggaggaac 714 |||||||||||| Sbjct: 2459371 tgctggaggaac 2459360 Score = 123 bits (62), Expect = 1e-24 Identities = 113/130 (86%) Strand = Plus / Minus Query: 318 agaattttggacatattgatattgttgtctccaatgctgctgcaaatccttctgtggata 377 |||||||||| ||||| || || |||||||||||||||||||| |||||||| || |||| Sbjct: 2462171 agaattttgggcatatcgacatagttgtctccaatgctgctgccaatccttccgtagata 2462112 Query: 378 gcatactagagatgaaagaaccagttcttgacaagctatgggatattaatgtcaaagcat 437 |||| |||| |||||||| || | |||||||| ||||||||||||||||| || |||| Sbjct: 2462111 acatattagaaatgaaagagcctatccttgacaaactatgggatattaatgttaaggcat 2462052 Query: 438 ctattcttct 447 |||||||||| Sbjct: 2462051 ctattcttct 2462042 Score = 105 bits (53), Expect = 3e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 199 gcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggggatcactgttgtggg 258 |||||| ||||| ||||||||||| | |||||||||||| ||||||||||| || || || Sbjct: 2463516 gcagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggggatcaccgtcgtcgg 2463457 Query: 259 ggccgtctgccacgtctccaacgccgaacagcgcaagcacctcatcgacacggccgtcaa 318 || |||||||| ||||||| | | || ||||||||| |||||||||||||||| ||||| Sbjct: 2463456 ggtggtctgccatgtctccatcccggagcagcgcaagaacctcatcgacacggcggtcaa 2463397 Query: 319 g 319 | Sbjct: 2463396 g 2463396 Score = 89.7 bits (45), Expect = 2e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 468 atttgaggaagggatcatctgtgataataatttcttcaattgctgactataatcctgaag 527 ||||| ||||||||||||| |||||| | |||||||||||| ||| ||||||||| ||| Sbjct: 2461922 atttgcggaagggatcatccgtgatattgatttcttcaattactggctataatccagaac 2461863 Query: 528 cagctttatcgatgtatggtgttacaaagaccgccct 564 |||| || |||||||||| ||||||||| || ||||| Sbjct: 2461862 cagcattgtcgatgtatgctgttacaaaaactgccct 2461826 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Minus Query: 332 attgatattgttgtctccaatgctgctgcaaatcct 367 |||||||||||||||||||||||| ||||||||||| Sbjct: 2462236 attgatattgttgtctccaatgctactgcaaatcct 2462201
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 190 bits (96), Expect = 6e-45 Identities = 126/136 (92%) Strand = Plus / Minus Query: 64 gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 123 ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || Sbjct: 142131 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 142072 Query: 124 cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 183 ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 142071 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 142012 Query: 184 catctcctcccgcaag 199 |||||||||||||||| Sbjct: 142011 catctcctcccgcaag 141996 Score = 167 bits (84), Expect = 9e-38 Identities = 120/132 (90%) Strand = Plus / Minus Query: 583 aaatgagctcatcgagaggagcatacttaagagattgggtagcgtggaagacatggcttc 642 ||||||||| || || ||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 137901 aaatgagcttattgacaggagcacacttaagagattgggtactgtggaagacatggctgc 137842 Query: 643 agccgccgctttcctggcatccgacgatgcatccttcattacagctgaaacaattgttgt 702 |||||| |||||| ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 137841 agccgcagctttcttggcatcagacgatgcatcattcattacagctgaaactattgttgt 137782 Query: 703 tgctggaggaac 714 |||||||||||| Sbjct: 137781 tgctggaggaac 137770 Score = 123 bits (62), Expect = 1e-24 Identities = 113/130 (86%) Strand = Plus / Minus Query: 318 agaattttggacatattgatattgttgtctccaatgctgctgcaaatccttctgtggata 377 |||||||||| ||||| || || |||||||||||||||||||| |||||||| || |||| Sbjct: 140581 agaattttgggcatatcgacatagttgtctccaatgctgctgccaatccttccgtagata 140522 Query: 378 gcatactagagatgaaagaaccagttcttgacaagctatgggatattaatgtcaaagcat 437 |||| |||| |||||||| || | |||||||| ||||||||||||||||| || |||| Sbjct: 140521 acatattagaaatgaaagagcctatccttgacaaactatgggatattaatgttaaggcat 140462 Query: 438 ctattcttct 447 |||||||||| Sbjct: 140461 ctattcttct 140452 Score = 105 bits (53), Expect = 3e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 199 gcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggggatcactgttgtggg 258 |||||| ||||| ||||||||||| | |||||||||||| ||||||||||| || || || Sbjct: 141926 gcagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggggatcaccgtcgtcgg 141867 Query: 259 ggccgtctgccacgtctccaacgccgaacagcgcaagcacctcatcgacacggccgtcaa 318 || |||||||| ||||||| | | || ||||||||| |||||||||||||||| ||||| Sbjct: 141866 ggtggtctgccatgtctccatcccggagcagcgcaagaacctcatcgacacggcggtcaa 141807 Query: 319 g 319 | Sbjct: 141806 g 141806 Score = 89.7 bits (45), Expect = 2e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 468 atttgaggaagggatcatctgtgataataatttcttcaattgctgactataatcctgaag 527 ||||| ||||||||||||| |||||| | |||||||||||| ||| ||||||||| ||| Sbjct: 140332 atttgcggaagggatcatccgtgatattgatttcttcaattactggctataatccagaac 140273 Query: 528 cagctttatcgatgtatggtgttacaaagaccgccct 564 |||| || |||||||||| ||||||||| || ||||| Sbjct: 140272 cagcattgtcgatgtatgctgttacaaaaactgccct 140236 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Minus Query: 332 attgatattgttgtctccaatgctgctgcaaatcct 367 |||||||||||||||||||||||| ||||||||||| Sbjct: 140646 attgatattgttgtctccaatgctactgcaaatcct 140611
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 190 bits (96), Expect = 6e-45 Identities = 126/136 (92%) Strand = Plus / Minus Query: 64 gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 123 ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || Sbjct: 50311 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 50252 Query: 124 cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 183 ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 50251 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 50192 Query: 184 catctcctcccgcaag 199 |||||||||||||||| Sbjct: 50191 catctcctcccgcaag 50176 Score = 167 bits (84), Expect = 9e-38 Identities = 120/132 (90%) Strand = Plus / Minus Query: 583 aaatgagctcatcgagaggagcatacttaagagattgggtagcgtggaagacatggcttc 642 ||||||||| || || ||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 46081 aaatgagcttattgacaggagcacacttaagagattgggtactgtggaagacatggctgc 46022 Query: 643 agccgccgctttcctggcatccgacgatgcatccttcattacagctgaaacaattgttgt 702 |||||| |||||| ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 46021 agccgcagctttcttggcatcagacgatgcatcattcattacagctgaaactattgttgt 45962 Query: 703 tgctggaggaac 714 |||||||||||| Sbjct: 45961 tgctggaggaac 45950 Score = 123 bits (62), Expect = 1e-24 Identities = 113/130 (86%) Strand = Plus / Minus Query: 318 agaattttggacatattgatattgttgtctccaatgctgctgcaaatccttctgtggata 377 |||||||||| ||||| || || |||||||||||||||||||| |||||||| || |||| Sbjct: 48761 agaattttgggcatatcgacatagttgtctccaatgctgctgccaatccttccgtagata 48702 Query: 378 gcatactagagatgaaagaaccagttcttgacaagctatgggatattaatgtcaaagcat 437 |||| |||| |||||||| || | |||||||| ||||||||||||||||| || |||| Sbjct: 48701 acatattagaaatgaaagagcctatccttgacaaactatgggatattaatgttaaggcat 48642 Query: 438 ctattcttct 447 |||||||||| Sbjct: 48641 ctattcttct 48632 Score = 105 bits (53), Expect = 3e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 199 gcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggggatcactgttgtggg 258 |||||| ||||| ||||||||||| | |||||||||||| ||||||||||| || || || Sbjct: 50106 gcagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggggatcaccgtcgtcgg 50047 Query: 259 ggccgtctgccacgtctccaacgccgaacagcgcaagcacctcatcgacacggccgtcaa 318 || |||||||| ||||||| | | || ||||||||| |||||||||||||||| ||||| Sbjct: 50046 ggtggtctgccatgtctccatcccggagcagcgcaagaacctcatcgacacggcggtcaa 49987 Query: 319 g 319 | Sbjct: 49986 g 49986 Score = 89.7 bits (45), Expect = 2e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 468 atttgaggaagggatcatctgtgataataatttcttcaattgctgactataatcctgaag 527 ||||| ||||||||||||| |||||| | |||||||||||| ||| ||||||||| ||| Sbjct: 48512 atttgcggaagggatcatccgtgatattgatttcttcaattactggctataatccagaac 48453 Query: 528 cagctttatcgatgtatggtgttacaaagaccgccct 564 |||| || |||||||||| ||||||||| || ||||| Sbjct: 48452 cagcattgtcgatgtatgctgttacaaaaactgccct 48416 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Minus Query: 332 attgatattgttgtctccaatgctgctgcaaatcct 367 |||||||||||||||||||||||| ||||||||||| Sbjct: 48826 attgatattgttgtctccaatgctactgcaaatcct 48791
>gb|AF494368.1| Arabidopsis lyrata subsp. petraea short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1181 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174527.1| Arabidopsis lyrata subsp. lyrata isolate Mi9-1.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1150 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174526.1| Arabidopsis lyrata subsp. lyrata isolate MI9-1.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1150 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174525.1| Arabidopsis lyrata subsp. lyrata isolate Mi8-1.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174524.1| Arabidopsis lyrata subsp. lyrata isolate Mi8-1.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174523.1| Arabidopsis lyrata subsp. lyrata isolate Nc4-1.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174522.1| Arabidopsis lyrata subsp. lyrata isolate NC4-1.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174521.1| Arabidopsis lyrata subsp. lyrata isolate Nc3-2.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174520.1| Arabidopsis lyrata subsp. lyrata isolate Nc3-2.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174519.1| Arabidopsis lyrata subsp. lyrata isolate Nc2-2.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174518.1| Arabidopsis lyrata subsp. lyrata isolate Nc2-2.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174517.1| Arabidopsis lyrata subsp. lyrata isolate Nc1-7.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174516.1| Arabidopsis lyrata subsp. lyrata isolate NC1-7.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174507.1| Arabidopsis lyrata subsp. petraea isolate Sc17-1.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1148 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 525 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 580
>gb|AY174506.1| Arabidopsis lyrata subsp. petraea isolate Sc14-1.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1148 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 525 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 580
>gb|AY174504.1| Arabidopsis lyrata subsp. petraea isolate Sc14-1.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|AY174502.1| Arabidopsis lyrata subsp. petraea isolate Sc15-1.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||||||||| || ||||||||| | ||||||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 58.0 bits (29), Expect = 6e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 125 acgcagggcatcggactcgccatcgccga 153 ||||||||||||||||||||||||||||| Sbjct: 677866 acgcagggcatcggactcgccatcgccga 677894
>ref|NM_116791.1| Arabidopsis thaliana oxidoreductase (AT4G05530) mRNA, complete cds Length = 1123 Score = 58.0 bits (29), Expect = 6e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 451 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| ||| Sbjct: 392 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 451 Query: 452 cagga 456 ||||| Sbjct: 452 cagga 456
>gb|AY113900.1| Arabidopsis thaliana unknown protein (At4g05530) mRNA, complete cds Length = 796 Score = 58.0 bits (29), Expect = 6e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 451 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| ||| Sbjct: 325 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 384 Query: 452 cagga 456 ||||| Sbjct: 385 cagga 389
>gb|AY035106.1| Arabidopsis thaliana unknown protein (At4g05530) mRNA, complete cds Length = 1087 Score = 58.0 bits (29), Expect = 6e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 451 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| ||| Sbjct: 375 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 434 Query: 452 cagga 456 ||||| Sbjct: 435 cagga 439
>dbj|AP008240.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39G20, TM0353a, complete sequence Length = 78736 Score = 58.0 bits (29), Expect = 6e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 339 ttgttgtctccaatgctgctgcaaatccttctgtggatagcatactagagatgaaagaac 398 ||||||| |||||||||||||| ||||||||||| ||| ||| || | | || || Sbjct: 28127 ttgttgtgtccaatgctgctgcgaatccttctgttgatgccattctgcaaacaaaggaca 28186 Query: 399 cagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 | |||||||||||| ||||||| || ||||||||||| ||||| ||||| Sbjct: 28187 cggttcttgacaagttatgggagataaatgtcaaagcctctatacttct 28235
>gb|AY087807.1| Arabidopsis thaliana clone 38543 mRNA, complete sequence Length = 1123 Score = 58.0 bits (29), Expect = 6e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 451 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| ||| Sbjct: 392 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 451 Query: 452 cagga 456 ||||| Sbjct: 452 cagga 456
>emb|BX826379.1|CNS0A2B1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB20ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1101 Score = 58.0 bits (29), Expect = 6e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 451 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| ||| Sbjct: 380 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 439 Query: 452 cagga 456 ||||| Sbjct: 440 cagga 444
>gb|AY174529.1| Arabidopsis thaliana isolate KNO10 short chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1363 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 451 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| ||| Sbjct: 710 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 769 Query: 452 cagg 455 |||| Sbjct: 770 cagg 773
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15 Length = 199987 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 451 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| ||| Sbjct: 155815 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 155874 Query: 452 cagg 455 |||| Sbjct: 155875 cagg 155878
>gb|AF147263.1|T1J24 Arabidopsis thaliana BAC T1J24 Length = 122529 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 451 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| ||| Sbjct: 80054 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 79995 Query: 452 cagg 455 |||| Sbjct: 79994 cagg 79991
>gb|AY174515.1| Arabidopsis lyrata subsp. petraea isolate Ic38-1.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1170 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaa 432 |||||| | |||||||||||||||||||| || |||||||| Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
>gb|AY174514.1| Arabidopsis lyrata subsp. petraea isolate Ic33-3.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1170 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaa 432 |||||| | |||||||||||||||||||| || |||||||| Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
>gb|AY174513.1| Arabidopsis lyrata short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1170 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaa 432 |||||| | |||||||||||||||||||| || |||||||| Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
>gb|AY174512.1| Arabidopsis lyrata subsp. petraea isolate Ic38-1.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1170 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaa 432 |||||| | |||||||||||||||||||| || |||||||| Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
>gb|AY174511.1| Arabidopsis lyrata subsp. petraea isolate Ic42-1.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1161 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaa 432 |||||| | |||||||||||||||||||| || |||||||| Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 587
>gb|AY174510.1| Arabidopsis lyrata subsp. petraea isolate Ic36-1.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1170 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaa 432 |||||| | |||||||||||||||||||| || |||||||| Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
>gb|AY174509.1| Arabidopsis lyrata subsp. petraea isolate Ic32-7.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1170 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaa 432 |||||| | |||||||||||||||||||| || |||||||| Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
>gb|AY174508.1| Arabidopsis lyrata subsp. petraea isolate Ic32-7.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1170 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaa 432 |||||| | |||||||||||||||||||| || |||||||| Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
>gb|AY174503.1| Arabidopsis lyrata subsp. petraea isolate Sc15-1.2 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1170 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaa 432 |||||| | |||||||||||||||||||| || |||||||| Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.058 Identities = 24/24 (100%) Strand = Plus / Minus Query: 141 tcgccatcgccgagcgcctcggcc 164 |||||||||||||||||||||||| Sbjct: 28377315 tcgccatcgccgagcgcctcggcc 28377292
>emb|AL160408.24| Human DNA sequence from clone RP4-781K5 on chromosome 1q42.1-43, complete sequence Length = 132887 Score = 48.1 bits (24), Expect = 0.058 Identities = 24/24 (100%) Strand = Plus / Plus Query: 522 ctgaagcagctttatcgatgtatg 545 |||||||||||||||||||||||| Sbjct: 7820 ctgaagcagctttatcgatgtatg 7843
>gb|AY174531.1| Arabidopsis thaliana isolate GOT16 short chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1359 Score = 48.1 bits (24), Expect = 0.058 Identities = 48/56 (85%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| Sbjct: 706 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttct 761
>gb|AY174530.1| Arabidopsis thaliana isolate CIBC6 short chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1363 Score = 48.1 bits (24), Expect = 0.058 Identities = 48/56 (85%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| Sbjct: 710 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttct 765
>gb|AY174528.1| Arabidopsis thaliana isolate PUZ16 short chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1358 Score = 48.1 bits (24), Expect = 0.058 Identities = 48/56 (85%) Strand = Plus / Plus Query: 392 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 447 |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| Sbjct: 705 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttct 760
>gb|AY174505.1| Arabidopsis lyrata subsp. petraea isolate Sc17-1.1 short-chain alcohol dehydrogenase (SCADH) gene, partial cds Length = 1170 Score = 48.1 bits (24), Expect = 0.058 Identities = 30/32 (93%) Strand = Plus / Plus Query: 401 gttcttgacaagctatgggatattaatgtcaa 432 |||||||||||||||||||| || |||||||| Sbjct: 565 gttcttgacaagctatgggaaatcaatgtcaa 596
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 48.1 bits (24), Expect = 0.058 Identities = 24/24 (100%) Strand = Plus / Minus Query: 141 tcgccatcgccgagcgcctcggcc 164 |||||||||||||||||||||||| Sbjct: 89893 tcgccatcgccgagcgcctcggcc 89870
>dbj|AB025332.1| Lampetra reissneri mRNA for RNA polymerase II largest subunit, partial cds Length = 1785 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 298 cctcatcgacacggccgtcaaga 320 ||||||||||||||||||||||| Sbjct: 1035 cctcatcgacacggccgtcaaga 1057
>ref|XM_001218441.1| Aspergillus terreus NIH2624 hypothetical protein (ATEG_09820) mRNA, complete cds Length = 3189 Score = 44.1 bits (22), Expect = 0.90 Identities = 22/22 (100%) Strand = Plus / Plus Query: 766 ttgagtacattgccatgatcaa 787 |||||||||||||||||||||| Sbjct: 1034 ttgagtacattgccatgatcaa 1055
>emb|CR559931.20| Zebrafish DNA sequence from clone DKEY-33G10 in linkage group 11, complete sequence Length = 210732 Score = 44.1 bits (22), Expect = 0.90 Identities = 22/22 (100%) Strand = Plus / Minus Query: 844 acaagatgcactgtaataaatt 865 |||||||||||||||||||||| Sbjct: 149979 acaagatgcactgtaataaatt 149958
>gb|AC021074.15| Homo sapiens 3 BAC RP11-372E1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183100 Score = 44.1 bits (22), Expect = 0.90 Identities = 22/22 (100%) Strand = Plus / Plus Query: 421 tattaatgtcaaagcatctatt 442 |||||||||||||||||||||| Sbjct: 148838 tattaatgtcaaagcatctatt 148859
>gb|AF253049.1|AF253049 Echis coloratus clone EC3 phospholipase A2 gene, complete cds Length = 2163 Score = 44.1 bits (22), Expect = 0.90 Identities = 25/26 (96%) Strand = Plus / Minus Query: 178 ggtcgtcatctcctcccgcaagcaga 203 |||||||| ||||||||||||||||| Sbjct: 1835 ggtcgtcacctcctcccgcaagcaga 1810
>gb|DQ294585.1| Hyaloraphidium curvatum isolate AFTOL-ID-26 RNA polymerase II largest subunit (RPB1) gene, partial cds Length = 3303 Score = 44.1 bits (22), Expect = 0.90 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ctcatcgacacggccgtcaaga 320 |||||||||||||||||||||| Sbjct: 2551 ctcatcgacacggccgtcaaga 2572
>emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, complete sequence Length = 193193 Score = 44.1 bits (22), Expect = 0.90 Identities = 22/22 (100%) Strand = Plus / Plus Query: 844 acaagatgcactgtaataaatt 865 |||||||||||||||||||||| Sbjct: 61414 acaagatgcactgtaataaatt 61435
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ggagcacggcgaggccggcga 71 ||||||||||||||||||||| Sbjct: 2949570 ggagcacggcgaggccggcga 2949590 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 ggcatcggactcgccatcgcc 151 ||||||||||||||||||||| Sbjct: 6276981 ggcatcggactcgccatcgcc 6276961
>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome Length = 3705021 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 cggcgaggccggcgatggagg 77 ||||||||||||||||||||| Sbjct: 2914903 cggcgaggccggcgatggagg 2914923
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 ctcgccatcgccgagcgcctcggcc 164 ||||||||||||||||||| ||||| Sbjct: 84905 ctcgccatcgccgagcgccgcggcc 84881
>gb|AC013265.7| Homo sapiens BAC clone RP11-197H3 from 2, complete sequence Length = 151721 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 aagcagctttatcgatgtatg 545 ||||||||||||||||||||| Sbjct: 143119 aagcagctttatcgatgtatg 143099
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gaaggtggccgtcgtgacggc 120 ||||||||||||||||||||| Sbjct: 2499259 gaaggtggccgtcgtgacggc 2499239 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 160,159,942 Number of extensions: 8483958 Number of successful extensions: 179205 Number of sequences better than 10.0: 64 Number of HSP's gapped: 179204 Number of HSP's successfully gapped: 86 Length of query: 941 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 918 Effective length of database: 18,503,978,556 Effective search space: 16986652314408 Effective search space used: 16986652314408 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)