| Clone Name | FLbaf75f24 |
|---|---|
| Clone Library Name | barley_pub |
>Q5J6M8:RTN3A_XENLA Reticulon-3-A - Xenopus laevis (African clawed frog)| Length = 214 Score = 60.5 bits (145), Expect = 1e-08 Identities = 51/194 (26%), Positives = 100/194 (51%), Gaps = 12/194 (6%) Frame = +3 Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLFL----WSNVCIF 482 DL+ WR+ K SG V G LL + + +++++ + L+LSL T+ + + +V Sbjct: 28 DLLYWRDVKQSGMVFGGTMV--LLLSLAAFSIISVISY-LVLSLLTVTISYRVYKSVLQA 84 Query: 483 IHKSPPNIP-EVKIPEDLTVN-------IALSLRHEINRGLFTLREIGHGRDLKKFLIVI 638 + K+ P + + +D+T++ + SL H +N L + + DL L + Sbjct: 85 VQKTDEGHPFKPLLEKDITLSSDSFQKALTASLAH-VNHALKYIVRLFLVDDLVDSLKLA 143 Query: 639 GGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEE 818 +W+++ +G+ N +TL + ++ +T P++YEKY ++D + ++K E Sbjct: 144 LLMWLMTYVGAVFNGITLLILGVLLTFTAPIVYEKYKVQIDHYVSLVHSQVKS----ITE 199 Query: 819 KVLSKIPKGALKNK 860 K+ +K+P GALK K Sbjct: 200 KIQAKLP-GALKKK 212
>Q68EW1:RTN3B_XENLA Reticulon-3-B - Xenopus laevis (African clawed frog)| Length = 214 Score = 58.5 bits (140), Expect = 5e-08 Identities = 49/194 (25%), Positives = 101/194 (52%), Gaps = 12/194 (6%) Frame = +3 Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLFL----WSNVCIF 482 DL+ WR+ K SG V G LL + + +++++ + L+LSL ++ + + +V Sbjct: 28 DLLYWRDVKQSGMVFGGTMV--LLLSLAAFSIISVISY-LVLSLLSVTISFRVYKSVLQA 84 Query: 483 IHKSPPNIP-EVKIPEDLTVN-------IALSLRHEINRGLFTLREIGHGRDLKKFLIVI 638 + K+ P + + +D+ ++ ++ SL H +N L ++ + DL L + Sbjct: 85 VQKTEEGHPFKPLLEKDIALSSDSFQKGLSSSLAH-VNHALKSIVRLFLVEDLVDSLKLA 143 Query: 639 GGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEE 818 +W+++ +G+ N +TL + ++ +T P++YEKY ++D + ++K E Sbjct: 144 LLMWLMTYIGAVFNGITLLILGVLLAFTTPLVYEKYKVQIDHYVSLVHSQVKS----ITE 199 Query: 819 KVLSKIPKGALKNK 860 K+ +K+P GALK K Sbjct: 200 KIQAKLP-GALKKK 212
>Q99P72:RTN4_MOUSE Reticulon-4 - Mus musculus (Mouse)| Length = 1162 Score = 57.8 bits (138), Expect = 9e-08 Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 8/190 (4%) Frame = +3 Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF-LWSNVCIFIHK 491 DL+ WR+ K +G V + + L V +T +LS+ F ++ V I K Sbjct: 977 DLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQK 1036 Query: 492 SPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIVIGGLW 650 S P EV I E+L + S +N + LR + DL L +W Sbjct: 1037 SDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVLMW 1096 Query: 651 VLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEKVLS 830 V + +G+ N LTL + + L+++PV+YE++ ++D + A +K A K+ + Sbjct: 1097 VFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSVKDAMA----KIQA 1152 Query: 831 KIPKGALKNK 860 KIP LK K Sbjct: 1153 KIP--GLKRK 1160
>Q9JK11:RTN4_RAT Reticulon-4 - Rattus norvegicus (Rat)| Length = 1163 Score = 57.4 bits (137), Expect = 1e-07 Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 8/190 (4%) Frame = +3 Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF-LWSNVCIFIHK 491 DL+ WR+ K +G V + + L V +T +LS+ F ++ V I K Sbjct: 978 DLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQK 1037 Query: 492 SPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIVIGGLW 650 S P EV I E+L + S +N + LR + DL L +W Sbjct: 1038 SDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVLMW 1097 Query: 651 VLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEKVLS 830 V + +G+ N LTL + + L+++PV+YE++ ++D + A +K A K+ + Sbjct: 1098 VFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMA----KIQA 1153 Query: 831 KIPKGALKNK 860 KIP LK K Sbjct: 1154 KIP--GLKRK 1161
>Q9NQC3:RTN4_HUMAN Reticulon-4 - Homo sapiens (Human)| Length = 1192 Score = 57.4 bits (137), Expect = 1e-07 Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 8/190 (4%) Frame = +3 Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF-LWSNVCIFIHK 491 DL+ WR+ K +G V + + L V +T +LS+ F ++ V I K Sbjct: 1007 DLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQK 1066 Query: 492 SPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIVIGGLW 650 S P EV I E+L + S +N + LR + DL L +W Sbjct: 1067 SDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMW 1126 Query: 651 VLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEKVLS 830 V + +G+ N LTL + + L++VPV+YE++ ++D + A +K A K+ + Sbjct: 1127 VFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMA----KIQA 1182 Query: 831 KIPKGALKNK 860 KIP LK K Sbjct: 1183 KIP--GLKRK 1190
>Q5RBL9:RTN3_PONPY Reticulon-3 - Pongo pygmaeus (Orangutan)| Length = 236 Score = 57.4 bits (137), Expect = 1e-07 Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 11/193 (5%) Frame = +3 Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVCIFI 485 DL+ WR+ K +G V T + +L + + ++++V + ++ L+ ++ +V + Sbjct: 50 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 107 Query: 486 HKSPPNIPEVKIPEDLTVNIALSLRHE--------INRGLFTLREIGHGRDLKKFLIVIG 641 KS P K D+ + ++ H INR L + + DL L + Sbjct: 108 QKSEEGHP-FKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 166 Query: 642 GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821 +W+++ +G+ N +TL + +++++VP++YEKY ++D + A + K EK Sbjct: 167 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKS----IVEK 222 Query: 822 VLSKIPKGALKNK 860 + +K+P G K K Sbjct: 223 IQAKLP-GIAKKK 234
>O95197:RTN3_HUMAN Reticulon-3 - Homo sapiens (Human)| Length = 1032 Score = 57.4 bits (137), Expect = 1e-07 Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 11/193 (5%) Frame = +3 Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVCIFI 485 DL+ WR+ K +G V T + +L + + ++++V + ++ L+ ++ +V + Sbjct: 846 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 903 Query: 486 HKSPPNIPEVKIPEDLTVNIALSLRHE--------INRGLFTLREIGHGRDLKKFLIVIG 641 KS P K D+ + ++ H INR L + + DL L + Sbjct: 904 QKSEEGHP-FKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 962 Query: 642 GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821 +W+++ +G+ N +TL + +++++VP++YEKY ++D + A + K EK Sbjct: 963 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKS----IVEK 1018 Query: 822 VLSKIPKGALKNK 860 + +K+P G K K Sbjct: 1019 IQAKLP-GIAKKK 1030
>Q28D16:RTN3_XENTR Reticulon-3 - Xenopus tropicalis (Western clawed frog) (Silurana| tropicalis) Length = 213 Score = 57.0 bits (136), Expect = 2e-07 Identities = 47/193 (24%), Positives = 96/193 (49%), Gaps = 11/193 (5%) Frame = +3 Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVCIFI 485 DL+ WR+ K SG V G LL + + +++++ + ++ LA ++ +V + Sbjct: 27 DLLYWRDVKQSGMVFGGTMV--LLLSLAAFSIISVISYLVLSLLAVTISYRVYKSVLQAV 84 Query: 486 HKSPPNIP-EVKIPEDLTVN-------IALSLRHEINRGLFTLREIGHGRDLKKFLIVIG 641 K+ P + + +D+ ++ ++ SL H +N L + + DL L + Sbjct: 85 QKTDEGHPFKPLLEKDIALSSDAFQKALSTSLAH-VNHALKYIVRLFLVEDLVDSLKLAL 143 Query: 642 GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821 +W+++ +G+ N +TL + ++ +T P++YEKY ++D + +K EK Sbjct: 144 LMWLMTYVGAVFNGITLLILGVLLAFTAPIVYEKYKVQIDHYVSLVHSHVKS----ITEK 199 Query: 822 VLSKIPKGALKNK 860 + +K+P GALK K Sbjct: 200 IQAKLP-GALKKK 211
>Q08D83:RTN3_BOVIN Reticulon-3 - Bos taurus (Bovine)| Length = 256 Score = 57.0 bits (136), Expect = 2e-07 Identities = 46/205 (22%), Positives = 99/205 (48%), Gaps = 10/205 (4%) Frame = +3 Query: 276 QPVHAVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATL 455 QPV ++ + DL+ WR+ K +G V T + +L + + ++++V + ++ L+ Sbjct: 58 QPV-SLFSTSQVHDLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVT 114 Query: 456 F---LWSNVCIFIHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGH 605 ++ +V + KS P ++ + + N + INR L + + Sbjct: 115 ISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFL 174 Query: 606 GRDLKKFLIVIGGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMI 785 DL L + +W+++ +G+ N +TL + ++++++P++YEKY ++D + A Sbjct: 175 VEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARD 234 Query: 786 ELKKYYAIFEEKVLSKIPKGALKNK 860 + K EK+ +K+P G K K Sbjct: 235 QTKS----IVEKIQAKLP-GIAKKK 254
>Q6RJR6:RTN3_RAT Reticulon-3 - Rattus norvegicus (Rat)| Length = 940 Score = 55.1 bits (131), Expect = 6e-07 Identities = 44/193 (22%), Positives = 94/193 (48%), Gaps = 11/193 (5%) Frame = +3 Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVCIFI 485 DL+ WR+ K +G V T + +L + + ++++V + ++ L+ ++ +V + Sbjct: 754 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811 Query: 486 HKSPPNIPEVKIPEDLTVNIALSLRHE--------INRGLFTLREIGHGRDLKKFLIVIG 641 KS P K D+ + ++ H +N+ L + + DL L + Sbjct: 812 QKSEEGHP-FKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAV 870 Query: 642 GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821 +W+++ +G+ N +TL + +++++VP++YEKY ++D + A + K EK Sbjct: 871 FMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKS----IVEK 926 Query: 822 VLSKIPKGALKNK 860 + +K+P G K K Sbjct: 927 IQAKLP-GIAKKK 938
>Q9ES97:RTN3_MOUSE Reticulon-3 - Mus musculus (Mouse)| Length = 964 Score = 55.1 bits (131), Expect = 6e-07 Identities = 44/193 (22%), Positives = 94/193 (48%), Gaps = 11/193 (5%) Frame = +3 Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVCIFI 485 DL+ WR+ K +G V T + +L + + ++++V + ++ L+ ++ +V + Sbjct: 778 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835 Query: 486 HKSPPNIPEVKIPEDLTVNIALSLRHE--------INRGLFTLREIGHGRDLKKFLIVIG 641 KS P K D+ + ++ H +N+ L + + DL L + Sbjct: 836 QKSEEGHP-FKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAV 894 Query: 642 GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821 +W+++ +G+ N +TL + +++++VP++YEKY ++D + A + K EK Sbjct: 895 FMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKS----IVEK 950 Query: 822 VLSKIPKGALKNK 860 + +K+P G K K Sbjct: 951 IQAKLP-GIAKKK 962
>Q5IS59:RTN1_PANTR Reticulon-1 - Pan troglodytes (Chimpanzee)| Length = 776 Score = 54.3 bits (129), Expect = 1e-06 Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 10/188 (5%) Frame = +3 Query: 306 KPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVC 476 K DL+ WR+ K +G V + + LLF + ++ ++++V + + +L+ ++ +V Sbjct: 588 KAIDLLYWRDIKQTGIVFG--SFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 645 Query: 477 IFIHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIV 635 + K+ P E+ + ++ L+ +N L LR + +DL L Sbjct: 646 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 705 Query: 636 IGGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFE 815 +W+L+ +G+ N LTL + V ++T+PV+Y K+ ++D + + A Sbjct: 706 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVA--- 762 Query: 816 EKVLSKIP 839 K+ +KIP Sbjct: 763 -KIQAKIP 769
>Q16799:RTN1_HUMAN Reticulon-1 - Homo sapiens (Human)| Length = 776 Score = 54.3 bits (129), Expect = 1e-06 Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 10/188 (5%) Frame = +3 Query: 306 KPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVC 476 K DL+ WR+ K +G V + + LLF + ++ ++++V + + +L+ ++ +V Sbjct: 588 KAIDLLYWRDIKQTGIVFG--SFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 645 Query: 477 IFIHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIV 635 + K+ P E+ + ++ L+ +N L LR + +DL L Sbjct: 646 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 705 Query: 636 IGGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFE 815 +W+L+ +G+ N LTL + V ++T+PV+Y K+ ++D + + A Sbjct: 706 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVA--- 762 Query: 816 EKVLSKIP 839 K+ +KIP Sbjct: 763 -KIQAKIP 769
>Q64548:RTN1_RAT Reticulon-1 - Rattus norvegicus (Rat)| Length = 777 Score = 53.9 bits (128), Expect = 1e-06 Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 10/188 (5%) Frame = +3 Query: 306 KPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVC 476 K DL+ WR+ K +G V + + LLF + ++ ++++V + + +L+ ++ +V Sbjct: 589 KAIDLLYWRDIKQTGIVFG--SFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 646 Query: 477 IFIHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIV 635 + K+ P E+ + ++ L+ +N L LR + +DL L Sbjct: 647 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKF 706 Query: 636 IGGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFE 815 +W+L+ +G+ N LTL + V ++T+PV+Y K+ +VD + + A Sbjct: 707 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVA--- 763 Query: 816 EKVLSKIP 839 K+ +KIP Sbjct: 764 -KIQAKIP 770
>Q8K0T0:RTN1_MOUSE Reticulon-1 - Mus musculus (Mouse)| Length = 780 Score = 53.9 bits (128), Expect = 1e-06 Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 10/188 (5%) Frame = +3 Query: 306 KPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVC 476 K DL+ WR+ K +G V + + LLF + ++ ++++V + + +L+ ++ +V Sbjct: 592 KAIDLLYWRDIKQTGIVFG--SFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 649 Query: 477 IFIHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIV 635 + K+ P E+ + ++ L+ +N L LR + +DL L Sbjct: 650 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKF 709 Query: 636 IGGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFE 815 +W+L+ +G+ N LTL + V ++T+PV+Y K+ +VD + + A Sbjct: 710 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVA--- 766 Query: 816 EKVLSKIP 839 K+ +KIP Sbjct: 767 -KIQAKIP 773
>O70622:RTN2_MOUSE Reticulon-2 - Mus musculus (Mouse)| Length = 471 Score = 52.4 bits (124), Expect = 4e-06 Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 10/186 (5%) Frame = +3 Query: 312 ADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLA---TLFLWSNVCIF 482 ADL+ W++ + SG V G A L ++ + ++++ H +L L +L ++ V Sbjct: 273 ADLLYWKDTRTSGAVFTGLMASLLC--LLHFSIVSVAAHLALLGLCATISLRVYRKVLQA 330 Query: 483 IHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIVIG 641 +H+ P ++ + + T ++ + + LR DL L + Sbjct: 331 VHRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKLAL 390 Query: 642 GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821 ++L+ +G+ N LTL + V L+TVP+LY ++ ++D + +L A K Sbjct: 391 LFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYVGLVTNQLSHIKA----K 446 Query: 822 VLSKIP 839 + +KIP Sbjct: 447 IRAKIP 452
>O75298:RTN2_HUMAN Reticulon-2 - Homo sapiens (Human)| Length = 545 Score = 51.6 bits (122), Expect = 6e-06 Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 16/200 (8%) Frame = +3 Query: 300 GGKPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLA---TLFLWSN 470 G K ADL+ W++ + SG V G L ++ + ++++ H +L L +L ++ Sbjct: 342 GSKVADLLYWKDTRTSGVVFTGLMVSLLC--LLHFSIVSVAAHLALLLLCGTISLRVYRK 399 Query: 471 VCIFIHKSPPNIP-EVKIPEDLTVNIALS--LRHEINRGLFTLREIGHGRDLKKFLIV-- 635 V +H+ P + + DLT+ + L H+I T R + L+ F +V Sbjct: 400 VLQAVHRGDGANPFQAYLDVDLTLTREQTERLSHQI-----TSRVVSAATQLRHFFLVED 454 Query: 636 -IGGL------WVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELK 794 + L ++L+ +G+ N LTL + + L+T+P+LY ++ ++D + +L Sbjct: 455 LVDSLKLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLS 514 Query: 795 KYYAIFEEKVLSKIP-KGAL 851 A K+ +KIP GAL Sbjct: 515 HIKA----KIRAKIPGTGAL 530
>Q5URB5:YL185_MIMIV Uncharacterized protein L185 - Mimivirus| Length = 392 Score = 32.7 bits (73), Expect = 3.1 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = -2 Query: 836 DLRQDLLFKDGIILLQLDHGLLTKSINLVIILLIQNWDSVQH 711 D DL+F + +ILL ++G +I++V ILL DS+QH Sbjct: 147 DTNNDLIFNNDLILLIFEYGFFEDTIDVVKILL----DSIQH 184
>Q58189:Y779_METJA Uncharacterized protein MJ0779 - Methanococcus jannaschii| Length = 299 Score = 32.0 bits (71), Expect = 5.3 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Frame = +3 Query: 558 RHEINRGLFTLREIGHGRDLKKFLIVIGGLWVLSVLGSCCNFLTL-SYIVFVVLYTVPVL 734 + I R + +++G D KKF++++ + + +L S LTL S I+FVV+Y L Sbjct: 10 KRTIKRNIILFKKLGKDFDEKKFILLLIIIAAIPLLISYYLHLTLKSMIIFVVIYVGAAL 69 Query: 735 YEK---YDDKVD 761 + Y++K++ Sbjct: 70 FIPSILYENKIE 81
>Q9Z179:SHCBP_MOUSE SHC SH2 domain-binding protein 1 - Mus musculus (Mouse)| Length = 668 Score = 32.0 bits (71), Expect = 5.3 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 4/102 (3%) Frame = +3 Query: 537 VNIALSLRHEINRGLFTLREIGHGRDLKKFLIVIGGLWVLSVLGSCCNF----LTLSYIV 704 V +A +E FTL + DLK+F + + LWV+S F L + ++ Sbjct: 142 VRLAEPCIYESKLSTFTLANVKELLDLKEFHLPLQELWVVS--DDSHEFHQMALAIEHVR 199 Query: 705 FVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEKVLS 830 F + E+ +D+ D F L+ YY I E++V S Sbjct: 200 FFYKHIWRSWDEEEEDEYDYFVRCVEPRLRLYYDILEDRVPS 241
>Q9V1N4:Y393_PYRAB UPF0278 protein PYRAB03930 - Pyrococcus abyssi| Length = 204 Score = 31.6 bits (70), Expect = 7.0 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = +3 Query: 477 IFIHKSPPNIPEVKIPEDLTVNIALSLRHEINRGL 581 ++I K PPN+ ++KIP + + +R +++GL Sbjct: 69 LYIIKKPPNVHDIKIPAFVVYELIEDIRRRVDKGL 103
>Q8TH04:Y1880_PYRFU UPF0278 protein PF1880 - Pyrococcus furiosus| Length = 199 Score = 31.6 bits (70), Expect = 7.0 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = +3 Query: 477 IFIHKSPPNIPEVKIPEDLTVNIALSLRHEINRGL 581 ++I K PPN+ ++KIP + + +R +++GL Sbjct: 67 LYIIKKPPNVHDIKIPAFVVYELIEDIRRRVDKGL 101
>O59517:Y1839_PYRHO UPF0278 protein PH1839 - Pyrococcus horikoshii| Length = 204 Score = 31.6 bits (70), Expect = 7.0 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = +3 Query: 477 IFIHKSPPNIPEVKIPEDLTVNIALSLRHEINRGL 581 ++I K PPN+ ++KIP + + +R +++GL Sbjct: 69 LYIIKKPPNVHDIKIPAFVVYELIEDIRRRVDKGL 103 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 174,745,762 Number of extensions: 3547452 Number of successful extensions: 10327 Number of sequences better than 10.0: 23 Number of HSP's gapped: 10320 Number of HSP's successfully gapped: 23 Length of query: 405 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 289 Effective length of database: 68,868,219 Effective search space: 19902915291 Effective search space used: 19902915291 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)