ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf75f24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q5J6M8:RTN3A_XENLA Reticulon-3-A - Xenopus laevis (African clawe... 60 1e-08
2Q68EW1:RTN3B_XENLA Reticulon-3-B - Xenopus laevis (African clawe... 59 5e-08
3Q99P72:RTN4_MOUSE Reticulon-4 - Mus musculus (Mouse) 58 9e-08
4Q9JK11:RTN4_RAT Reticulon-4 - Rattus norvegicus (Rat) 57 1e-07
5Q9NQC3:RTN4_HUMAN Reticulon-4 - Homo sapiens (Human) 57 1e-07
6Q5RBL9:RTN3_PONPY Reticulon-3 - Pongo pygmaeus (Orangutan) 57 1e-07
7O95197:RTN3_HUMAN Reticulon-3 - Homo sapiens (Human) 57 1e-07
8Q28D16:RTN3_XENTR Reticulon-3 - Xenopus tropicalis (Western claw... 57 2e-07
9Q08D83:RTN3_BOVIN Reticulon-3 - Bos taurus (Bovine) 57 2e-07
10Q6RJR6:RTN3_RAT Reticulon-3 - Rattus norvegicus (Rat) 55 6e-07
11Q9ES97:RTN3_MOUSE Reticulon-3 - Mus musculus (Mouse) 55 6e-07
12Q5IS59:RTN1_PANTR Reticulon-1 - Pan troglodytes (Chimpanzee) 54 1e-06
13Q16799:RTN1_HUMAN Reticulon-1 - Homo sapiens (Human) 54 1e-06
14Q64548:RTN1_RAT Reticulon-1 - Rattus norvegicus (Rat) 54 1e-06
15Q8K0T0:RTN1_MOUSE Reticulon-1 - Mus musculus (Mouse) 54 1e-06
16O70622:RTN2_MOUSE Reticulon-2 - Mus musculus (Mouse) 52 4e-06
17O75298:RTN2_HUMAN Reticulon-2 - Homo sapiens (Human) 52 6e-06
18Q5URB5:YL185_MIMIV Uncharacterized protein L185 - Mimivirus 33 3.1
19Q58189:Y779_METJA Uncharacterized protein MJ0779 - Methanococcus... 32 5.3
20Q9Z179:SHCBP_MOUSE SHC SH2 domain-binding protein 1 - Mus muscul... 32 5.3
21Q9V1N4:Y393_PYRAB UPF0278 protein PYRAB03930 - Pyrococcus abyssi 32 7.0
22Q8TH04:Y1880_PYRFU UPF0278 protein PF1880 - Pyrococcus furiosus 32 7.0
23O59517:Y1839_PYRHO UPF0278 protein PH1839 - Pyrococcus horikoshii 32 7.0

>Q5J6M8:RTN3A_XENLA Reticulon-3-A - Xenopus laevis (African clawed frog)|
          Length = 214
 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 51/194 (26%), Positives = 100/194 (51%), Gaps = 12/194 (6%)
 Frame = +3

Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLFL----WSNVCIF 482
           DL+ WR+ K SG V  G     LL  +  + +++++ + L+LSL T+ +    + +V   
Sbjct: 28  DLLYWRDVKQSGMVFGGTMV--LLLSLAAFSIISVISY-LVLSLLTVTISYRVYKSVLQA 84

Query: 483 IHKSPPNIP-EVKIPEDLTVN-------IALSLRHEINRGLFTLREIGHGRDLKKFLIVI 638
           + K+    P +  + +D+T++       +  SL H +N  L  +  +    DL   L + 
Sbjct: 85  VQKTDEGHPFKPLLEKDITLSSDSFQKALTASLAH-VNHALKYIVRLFLVDDLVDSLKLA 143

Query: 639 GGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEE 818
             +W+++ +G+  N +TL  +  ++ +T P++YEKY  ++D +      ++K       E
Sbjct: 144 LLMWLMTYVGAVFNGITLLILGVLLTFTAPIVYEKYKVQIDHYVSLVHSQVKS----ITE 199

Query: 819 KVLSKIPKGALKNK 860
           K+ +K+P GALK K
Sbjct: 200 KIQAKLP-GALKKK 212



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>Q68EW1:RTN3B_XENLA Reticulon-3-B - Xenopus laevis (African clawed frog)|
          Length = 214

 Score = 58.5 bits (140), Expect = 5e-08
 Identities = 49/194 (25%), Positives = 101/194 (52%), Gaps = 12/194 (6%)
 Frame = +3

Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLFL----WSNVCIF 482
           DL+ WR+ K SG V  G     LL  +  + +++++ + L+LSL ++ +    + +V   
Sbjct: 28  DLLYWRDVKQSGMVFGGTMV--LLLSLAAFSIISVISY-LVLSLLSVTISFRVYKSVLQA 84

Query: 483 IHKSPPNIP-EVKIPEDLTVN-------IALSLRHEINRGLFTLREIGHGRDLKKFLIVI 638
           + K+    P +  + +D+ ++       ++ SL H +N  L ++  +    DL   L + 
Sbjct: 85  VQKTEEGHPFKPLLEKDIALSSDSFQKGLSSSLAH-VNHALKSIVRLFLVEDLVDSLKLA 143

Query: 639 GGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEE 818
             +W+++ +G+  N +TL  +  ++ +T P++YEKY  ++D +      ++K       E
Sbjct: 144 LLMWLMTYIGAVFNGITLLILGVLLAFTTPLVYEKYKVQIDHYVSLVHSQVKS----ITE 199

Query: 819 KVLSKIPKGALKNK 860
           K+ +K+P GALK K
Sbjct: 200 KIQAKLP-GALKKK 212



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>Q99P72:RTN4_MOUSE Reticulon-4 - Mus musculus (Mouse)|
          Length = 1162

 Score = 57.8 bits (138), Expect = 9e-08
 Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 8/190 (4%)
 Frame = +3

Query: 315  DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF-LWSNVCIFIHK 491
            DL+ WR+ K +G V   +  + L   V     +T      +LS+   F ++  V   I K
Sbjct: 977  DLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQK 1036

Query: 492  SPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIVIGGLW 650
            S    P       EV I E+L    + S    +N  +  LR +    DL   L     +W
Sbjct: 1037 SDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVLMW 1096

Query: 651  VLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEKVLS 830
            V + +G+  N LTL  +  + L+++PV+YE++  ++D +   A   +K   A    K+ +
Sbjct: 1097 VFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSVKDAMA----KIQA 1152

Query: 831  KIPKGALKNK 860
            KIP   LK K
Sbjct: 1153 KIP--GLKRK 1160



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>Q9JK11:RTN4_RAT Reticulon-4 - Rattus norvegicus (Rat)|
          Length = 1163

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 8/190 (4%)
 Frame = +3

Query: 315  DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF-LWSNVCIFIHK 491
            DL+ WR+ K +G V   +  + L   V     +T      +LS+   F ++  V   I K
Sbjct: 978  DLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQK 1037

Query: 492  SPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIVIGGLW 650
            S    P       EV I E+L    + S    +N  +  LR +    DL   L     +W
Sbjct: 1038 SDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVLMW 1097

Query: 651  VLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEKVLS 830
            V + +G+  N LTL  +  + L+++PV+YE++  ++D +   A   +K   A    K+ +
Sbjct: 1098 VFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMA----KIQA 1153

Query: 831  KIPKGALKNK 860
            KIP   LK K
Sbjct: 1154 KIP--GLKRK 1161



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>Q9NQC3:RTN4_HUMAN Reticulon-4 - Homo sapiens (Human)|
          Length = 1192

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 8/190 (4%)
 Frame = +3

Query: 315  DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF-LWSNVCIFIHK 491
            DL+ WR+ K +G V   +  + L   V     +T      +LS+   F ++  V   I K
Sbjct: 1007 DLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQK 1066

Query: 492  SPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIVIGGLW 650
            S    P       EV I E+L    + S    +N  +  LR +    DL   L     +W
Sbjct: 1067 SDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMW 1126

Query: 651  VLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEKVLS 830
            V + +G+  N LTL  +  + L++VPV+YE++  ++D +   A   +K   A    K+ +
Sbjct: 1127 VFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMA----KIQA 1182

Query: 831  KIPKGALKNK 860
            KIP   LK K
Sbjct: 1183 KIP--GLKRK 1190



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>Q5RBL9:RTN3_PONPY Reticulon-3 - Pongo pygmaeus (Orangutan)|
          Length = 236

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
 Frame = +3

Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVCIFI 485
           DL+ WR+ K +G V    T + +L  +  + ++++V + ++  L+      ++ +V   +
Sbjct: 50  DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 107

Query: 486 HKSPPNIPEVKIPEDLTVNIALSLRHE--------INRGLFTLREIGHGRDLKKFLIVIG 641
            KS    P  K   D+ + ++    H         INR L  +  +    DL   L +  
Sbjct: 108 QKSEEGHP-FKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 166

Query: 642 GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821
            +W+++ +G+  N +TL  +  +++++VP++YEKY  ++D +   A  + K       EK
Sbjct: 167 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKS----IVEK 222

Query: 822 VLSKIPKGALKNK 860
           + +K+P G  K K
Sbjct: 223 IQAKLP-GIAKKK 234



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>O95197:RTN3_HUMAN Reticulon-3 - Homo sapiens (Human)|
          Length = 1032

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
 Frame = +3

Query: 315  DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVCIFI 485
            DL+ WR+ K +G V    T + +L  +  + ++++V + ++  L+      ++ +V   +
Sbjct: 846  DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 903

Query: 486  HKSPPNIPEVKIPEDLTVNIALSLRHE--------INRGLFTLREIGHGRDLKKFLIVIG 641
             KS    P  K   D+ + ++    H         INR L  +  +    DL   L +  
Sbjct: 904  QKSEEGHP-FKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 962

Query: 642  GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821
             +W+++ +G+  N +TL  +  +++++VP++YEKY  ++D +   A  + K       EK
Sbjct: 963  FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKS----IVEK 1018

Query: 822  VLSKIPKGALKNK 860
            + +K+P G  K K
Sbjct: 1019 IQAKLP-GIAKKK 1030



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>Q28D16:RTN3_XENTR Reticulon-3 - Xenopus tropicalis (Western clawed frog) (Silurana|
           tropicalis)
          Length = 213

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 47/193 (24%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
 Frame = +3

Query: 315 DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVCIFI 485
           DL+ WR+ K SG V  G     LL  +  + +++++ + ++  LA      ++ +V   +
Sbjct: 27  DLLYWRDVKQSGMVFGGTMV--LLLSLAAFSIISVISYLVLSLLAVTISYRVYKSVLQAV 84

Query: 486 HKSPPNIP-EVKIPEDLTVN-------IALSLRHEINRGLFTLREIGHGRDLKKFLIVIG 641
            K+    P +  + +D+ ++       ++ SL H +N  L  +  +    DL   L +  
Sbjct: 85  QKTDEGHPFKPLLEKDIALSSDAFQKALSTSLAH-VNHALKYIVRLFLVEDLVDSLKLAL 143

Query: 642 GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821
            +W+++ +G+  N +TL  +  ++ +T P++YEKY  ++D +       +K       EK
Sbjct: 144 LMWLMTYVGAVFNGITLLILGVLLAFTAPIVYEKYKVQIDHYVSLVHSHVKS----ITEK 199

Query: 822 VLSKIPKGALKNK 860
           + +K+P GALK K
Sbjct: 200 IQAKLP-GALKKK 211



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>Q08D83:RTN3_BOVIN Reticulon-3 - Bos taurus (Bovine)|
          Length = 256

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 46/205 (22%), Positives = 99/205 (48%), Gaps = 10/205 (4%)
 Frame = +3

Query: 276 QPVHAVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATL 455
           QPV ++    +  DL+ WR+ K +G V    T + +L  +  + ++++V + ++  L+  
Sbjct: 58  QPV-SLFSTSQVHDLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVT 114

Query: 456 F---LWSNVCIFIHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGH 605
               ++ +V   + KS    P       ++ +  +   N   +    INR L  +  +  
Sbjct: 115 ISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFL 174

Query: 606 GRDLKKFLIVIGGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMI 785
             DL   L +   +W+++ +G+  N +TL  +  ++++++P++YEKY  ++D +   A  
Sbjct: 175 VEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARD 234

Query: 786 ELKKYYAIFEEKVLSKIPKGALKNK 860
           + K       EK+ +K+P G  K K
Sbjct: 235 QTKS----IVEKIQAKLP-GIAKKK 254



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>Q6RJR6:RTN3_RAT Reticulon-3 - Rattus norvegicus (Rat)|
          Length = 940

 Score = 55.1 bits (131), Expect = 6e-07
 Identities = 44/193 (22%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
 Frame = +3

Query: 315  DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVCIFI 485
            DL+ WR+ K +G V    T + +L  +  + ++++V + ++  L+      ++ +V   +
Sbjct: 754  DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811

Query: 486  HKSPPNIPEVKIPEDLTVNIALSLRHE--------INRGLFTLREIGHGRDLKKFLIVIG 641
             KS    P  K   D+ + ++    H         +N+ L  +  +    DL   L +  
Sbjct: 812  QKSEEGHP-FKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAV 870

Query: 642  GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821
             +W+++ +G+  N +TL  +  +++++VP++YEKY  ++D +   A  + K       EK
Sbjct: 871  FMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKS----IVEK 926

Query: 822  VLSKIPKGALKNK 860
            + +K+P G  K K
Sbjct: 927  IQAKLP-GIAKKK 938



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>Q9ES97:RTN3_MOUSE Reticulon-3 - Mus musculus (Mouse)|
          Length = 964

 Score = 55.1 bits (131), Expect = 6e-07
 Identities = 44/193 (22%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
 Frame = +3

Query: 315  DLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVCIFI 485
            DL+ WR+ K +G V    T + +L  +  + ++++V + ++  L+      ++ +V   +
Sbjct: 778  DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835

Query: 486  HKSPPNIPEVKIPEDLTVNIALSLRHE--------INRGLFTLREIGHGRDLKKFLIVIG 641
             KS    P  K   D+ + ++    H         +N+ L  +  +    DL   L +  
Sbjct: 836  QKSEEGHP-FKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAV 894

Query: 642  GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821
             +W+++ +G+  N +TL  +  +++++VP++YEKY  ++D +   A  + K       EK
Sbjct: 895  FMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKS----IVEK 950

Query: 822  VLSKIPKGALKNK 860
            + +K+P G  K K
Sbjct: 951  IQAKLP-GIAKKK 962



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>Q5IS59:RTN1_PANTR Reticulon-1 - Pan troglodytes (Chimpanzee)|
          Length = 776

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
 Frame = +3

Query: 306  KPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVC 476
            K  DL+ WR+ K +G V    + + LLF + ++ ++++V +  + +L+      ++ +V 
Sbjct: 588  KAIDLLYWRDIKQTGIVFG--SFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 645

Query: 477  IFIHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIV 635
              + K+    P       E+ + ++        L+  +N  L  LR +   +DL   L  
Sbjct: 646  QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 705

Query: 636  IGGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFE 815
               +W+L+ +G+  N LTL  +  V ++T+PV+Y K+  ++D +       +    A   
Sbjct: 706  AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVA--- 762

Query: 816  EKVLSKIP 839
             K+ +KIP
Sbjct: 763  -KIQAKIP 769



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>Q16799:RTN1_HUMAN Reticulon-1 - Homo sapiens (Human)|
          Length = 776

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
 Frame = +3

Query: 306  KPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVC 476
            K  DL+ WR+ K +G V    + + LLF + ++ ++++V +  + +L+      ++ +V 
Sbjct: 588  KAIDLLYWRDIKQTGIVFG--SFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 645

Query: 477  IFIHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIV 635
              + K+    P       E+ + ++        L+  +N  L  LR +   +DL   L  
Sbjct: 646  QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 705

Query: 636  IGGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFE 815
               +W+L+ +G+  N LTL  +  V ++T+PV+Y K+  ++D +       +    A   
Sbjct: 706  AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVA--- 762

Query: 816  EKVLSKIP 839
             K+ +KIP
Sbjct: 763  -KIQAKIP 769



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>Q64548:RTN1_RAT Reticulon-1 - Rattus norvegicus (Rat)|
          Length = 777

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
 Frame = +3

Query: 306  KPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVC 476
            K  DL+ WR+ K +G V    + + LLF + ++ ++++V +  + +L+      ++ +V 
Sbjct: 589  KAIDLLYWRDIKQTGIVFG--SFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 646

Query: 477  IFIHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIV 635
              + K+    P       E+ + ++        L+  +N  L  LR +   +DL   L  
Sbjct: 647  QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKF 706

Query: 636  IGGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFE 815
               +W+L+ +G+  N LTL  +  V ++T+PV+Y K+  +VD +       +    A   
Sbjct: 707  AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVA--- 763

Query: 816  EKVLSKIP 839
             K+ +KIP
Sbjct: 764  -KIQAKIP 770



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>Q8K0T0:RTN1_MOUSE Reticulon-1 - Mus musculus (Mouse)|
          Length = 780

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
 Frame = +3

Query: 306  KPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLATLF---LWSNVC 476
            K  DL+ WR+ K +G V    + + LLF + ++ ++++V +  + +L+      ++ +V 
Sbjct: 592  KAIDLLYWRDIKQTGIVFG--SFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 649

Query: 477  IFIHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIV 635
              + K+    P       E+ + ++        L+  +N  L  LR +   +DL   L  
Sbjct: 650  QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKF 709

Query: 636  IGGLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFE 815
               +W+L+ +G+  N LTL  +  V ++T+PV+Y K+  +VD +       +    A   
Sbjct: 710  AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVA--- 766

Query: 816  EKVLSKIP 839
             K+ +KIP
Sbjct: 767  -KIQAKIP 773



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>O70622:RTN2_MOUSE Reticulon-2 - Mus musculus (Mouse)|
          Length = 471

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
 Frame = +3

Query: 312 ADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLA---TLFLWSNVCIF 482
           ADL+ W++ + SG V  G  A  L   ++ + ++++  H  +L L    +L ++  V   
Sbjct: 273 ADLLYWKDTRTSGAVFTGLMASLLC--LLHFSIVSVAAHLALLGLCATISLRVYRKVLQA 330

Query: 483 IHKSPPNIP-------EVKIPEDLTVNIALSLRHEINRGLFTLREIGHGRDLKKFLIVIG 641
           +H+     P       ++ +  + T  ++  +   +      LR      DL   L +  
Sbjct: 331 VHRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKLAL 390

Query: 642 GLWVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEK 821
             ++L+ +G+  N LTL  +  V L+TVP+LY ++  ++D +      +L    A    K
Sbjct: 391 LFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYVGLVTNQLSHIKA----K 446

Query: 822 VLSKIP 839
           + +KIP
Sbjct: 447 IRAKIP 452



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>O75298:RTN2_HUMAN Reticulon-2 - Homo sapiens (Human)|
          Length = 545

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
 Frame = +3

Query: 300 GGKPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLA---TLFLWSN 470
           G K ADL+ W++ + SG V  G     L   ++ + ++++  H  +L L    +L ++  
Sbjct: 342 GSKVADLLYWKDTRTSGVVFTGLMVSLLC--LLHFSIVSVAAHLALLLLCGTISLRVYRK 399

Query: 471 VCIFIHKSPPNIP-EVKIPEDLTVNIALS--LRHEINRGLFTLREIGHGRDLKKFLIV-- 635
           V   +H+     P +  +  DLT+    +  L H+I     T R +     L+ F +V  
Sbjct: 400 VLQAVHRGDGANPFQAYLDVDLTLTREQTERLSHQI-----TSRVVSAATQLRHFFLVED 454

Query: 636 -IGGL------WVLSVLGSCCNFLTLSYIVFVVLYTVPVLYEKYDDKVDAFGEKAMIELK 794
            +  L      ++L+ +G+  N LTL  +  + L+T+P+LY ++  ++D +      +L 
Sbjct: 455 LVDSLKLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLS 514

Query: 795 KYYAIFEEKVLSKIP-KGAL 851
              A    K+ +KIP  GAL
Sbjct: 515 HIKA----KIRAKIPGTGAL 530



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>Q5URB5:YL185_MIMIV Uncharacterized protein L185 - Mimivirus|
          Length = 392

 Score = 32.7 bits (73), Expect = 3.1
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = -2

Query: 836 DLRQDLLFKDGIILLQLDHGLLTKSINLVIILLIQNWDSVQH 711
           D   DL+F + +ILL  ++G    +I++V ILL    DS+QH
Sbjct: 147 DTNNDLIFNNDLILLIFEYGFFEDTIDVVKILL----DSIQH 184



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>Q58189:Y779_METJA Uncharacterized protein MJ0779 - Methanococcus jannaschii|
          Length = 299

 Score = 32.0 bits (71), Expect = 5.3
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
 Frame = +3

Query: 558 RHEINRGLFTLREIGHGRDLKKFLIVIGGLWVLSVLGSCCNFLTL-SYIVFVVLYTVPVL 734
           +  I R +   +++G   D KKF++++  +  + +L S    LTL S I+FVV+Y    L
Sbjct: 10  KRTIKRNIILFKKLGKDFDEKKFILLLIIIAAIPLLISYYLHLTLKSMIIFVVIYVGAAL 69

Query: 735 YEK---YDDKVD 761
           +     Y++K++
Sbjct: 70  FIPSILYENKIE 81



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>Q9Z179:SHCBP_MOUSE SHC SH2 domain-binding protein 1 - Mus musculus (Mouse)|
          Length = 668

 Score = 32.0 bits (71), Expect = 5.3
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
 Frame = +3

Query: 537 VNIALSLRHEINRGLFTLREIGHGRDLKKFLIVIGGLWVLSVLGSCCNF----LTLSYIV 704
           V +A    +E     FTL  +    DLK+F + +  LWV+S       F    L + ++ 
Sbjct: 142 VRLAEPCIYESKLSTFTLANVKELLDLKEFHLPLQELWVVS--DDSHEFHQMALAIEHVR 199

Query: 705 FVVLYTVPVLYEKYDDKVDAFGEKAMIELKKYYAIFEEKVLS 830
           F   +      E+ +D+ D F       L+ YY I E++V S
Sbjct: 200 FFYKHIWRSWDEEEEDEYDYFVRCVEPRLRLYYDILEDRVPS 241



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>Q9V1N4:Y393_PYRAB UPF0278 protein PYRAB03930 - Pyrococcus abyssi|
          Length = 204

 Score = 31.6 bits (70), Expect = 7.0
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 477 IFIHKSPPNIPEVKIPEDLTVNIALSLRHEINRGL 581
           ++I K PPN+ ++KIP  +   +   +R  +++GL
Sbjct: 69  LYIIKKPPNVHDIKIPAFVVYELIEDIRRRVDKGL 103



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>Q8TH04:Y1880_PYRFU UPF0278 protein PF1880 - Pyrococcus furiosus|
          Length = 199

 Score = 31.6 bits (70), Expect = 7.0
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 477 IFIHKSPPNIPEVKIPEDLTVNIALSLRHEINRGL 581
           ++I K PPN+ ++KIP  +   +   +R  +++GL
Sbjct: 67  LYIIKKPPNVHDIKIPAFVVYELIEDIRRRVDKGL 101



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>O59517:Y1839_PYRHO UPF0278 protein PH1839 - Pyrococcus horikoshii|
          Length = 204

 Score = 31.6 bits (70), Expect = 7.0
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 477 IFIHKSPPNIPEVKIPEDLTVNIALSLRHEINRGL 581
           ++I K PPN+ ++KIP  +   +   +R  +++GL
Sbjct: 69  LYIIKKPPNVHDIKIPAFVVYELIEDIRRRVDKGL 103


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 174,745,762
Number of extensions: 3547452
Number of successful extensions: 10327
Number of sequences better than 10.0: 23
Number of HSP's gapped: 10320
Number of HSP's successfully gapped: 23
Length of query: 405
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 289
Effective length of database: 68,868,219
Effective search space: 19902915291
Effective search space used: 19902915291
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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