ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf72a06 |
|---|---|
| Clone Library Name | barley_pub |
>AK071537:Os02g0758800 | Length = 246 Score = 30.0 bits (66), Expect(2) = 0.33 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Frame = -1 Query: 286 PRSDLGCATTRIEIPHHPTCEQGR-RTSATALCPGLSPAASFGGDGGM 146 P + + TT P P C G T T + PG P S+ G GG+ Sbjct: 177 PSTPMTTPTTPYTTPTSPACSGGAGATPVTPVTPGTVPFMSYNGAGGL 224 Score = 21.9 bits (45), Expect(2) = 0.33 Identities = 13/47 (27%), Positives = 19/47 (40%) Frame = -3 Query: 479 SHGAGHNGRPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAP 339 S G G G +TP+ T ++ +P T P +T P P Sbjct: 131 SGGGGGGGGGGSTPSSPSSPTPTTPNPSTPTPTTPYPSTPMPTTPYP 177
>AK101502:Os02g0125700 | Length = 143 Score = 32.7 bits (73), Expect = 0.46 Identities = 32/90 (35%), Positives = 37/90 (41%), Gaps = 5/90 (5%) Frame = -3 Query: 479 SHGAGHNG-----RPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLG 315 S G G G RP +P P RSS SP A+ P + PP AP S Sbjct: 15 SSGGGDKGSRWPWRPPPSP----PRPRSSPSPAAASTRAPTSSPSPPRASAPASASP--A 68 Query: 314 SDLGRPSCRATI*SRLRHHSHRDPASPHMR 225 GRP R SR R S R P+ P +R Sbjct: 69 PPPGRPPWRL---SRRRRASRR-PSRPPLR 94
>AK071006:Os02g0125700 | Length = 143 Score = 32.7 bits (73), Expect = 0.46 Identities = 32/90 (35%), Positives = 37/90 (41%), Gaps = 5/90 (5%) Frame = -3 Query: 479 SHGAGHNG-----RPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLG 315 S G G G RP +P P RSS SP A+ P + PP AP S Sbjct: 15 SSGGGDKGSRWPWRPPPSP----PRPRSSPSPAAASTRAPTSSPSPPRASAPASASP--A 68 Query: 314 SDLGRPSCRATI*SRLRHHSHRDPASPHMR 225 GRP R SR R S R P+ P +R Sbjct: 69 PPPGRPPWRL---SRRRRASRR-PSRPPLR 94
>AK101424:Os12g0239000 | Length = 1174 Score = 31.6 bits (70), Expect = 1.0 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = -3 Query: 434 CNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLGSDLGRPSCRAT 282 C+ P + S++P + T PG T P + +P RR+ + P+ T Sbjct: 181 CSPPLSLQSSTPSRRSPTPPGNKTLTPPRRSPSPASRRMSATSSGPTLNGT 231
>Os02g0236500:Os02g0236500 | Length = 1084 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/45 (33%), Positives = 19/45 (42%) Frame = -3 Query: 455 RPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRR 321 RP C R R + P + + P + PPAK AP C R Sbjct: 864 RPPFPSLCPRVRERRAERPSPSLSFSPSLVSSPPAKPAPAHHCSR 908 Score = 30.0 bits (66), Expect = 3.0 Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 9/123 (7%) Frame = -2 Query: 582 VSPTHSQDQMTNVKIRSPSLRTTSWTEEMAPRLAVAWSRAQRPAGSHTRMQQTIHQ---- 415 +SP+ S V++R + + + PR V RA+RP+ S + + Sbjct: 843 LSPSASAPPARRVRVRESRVERPPFPS-LCPR--VRERRAERPSPSLSFSPSLVSSPPAK 899 Query: 414 ---ILHVALPRRRYQAGPDNAAACQGRAQIPLPP--AWIRSWSAVVSRHDLISAAPPLAS 250 H + R R + A C R + P P A RS A SR SAAPP+AS Sbjct: 900 PAPAHHCSRARPRGRRPRRACAVCAARPRCPAAPTAARPRSQRACPSRATQ-SAAPPVAS 958 Query: 249 RSR 241 R+R Sbjct: 959 RAR 961
>AK066851:Os08g0378900 | Length = 189 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 8/51 (15%) Frame = -3 Query: 413 SSTSPFHAAATKPGRTTQPPAKDAPR--------SRCRRLGSDLGRPSCRA 285 +S P AA T PGR +PP P SRCR +G + CRA Sbjct: 7 ASLLPASAAPTLPGRAFRPPRNSTPTASLSCDGGSRCRGVGLGVILGGCRA 57
>AK058590:Os08g0378900 | Length = 189 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 8/51 (15%) Frame = -3 Query: 413 SSTSPFHAAATKPGRTTQPPAKDAPR--------SRCRRLGSDLGRPSCRA 285 +S P AA T PGR +PP P SRCR +G + CRA Sbjct: 7 ASLLPASAAPTLPGRAFRPPRNSTPTASLSCDGGSRCRGVGLGVILGGCRA 57
>AK108695:Os01g0736000 | Length = 187 Score = 30.8 bits (68), Expect = 1.7 Identities = 22/79 (27%), Positives = 33/79 (41%) Frame = -3 Query: 455 RPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLGSDLGRPSCRATI* 276 RP T AC+ P+ R S S A P +++ ++ PRS + LG P+ + Sbjct: 36 RPRGTSACSSPAPRRSPS-----AAPPAPSSRSRSRGRPRSAAAARPATLGTPASPLRLR 90 Query: 275 SRLRHHSHRDPASPHMRAG 219 + R R S R G Sbjct: 91 ALRRPMGRRRIISARARQG 109
>AK100846:Os01g0521500 | Length = 603 Score = 30.4 bits (67), Expect = 2.3 Identities = 24/88 (27%), Positives = 38/88 (43%) Frame = -3 Query: 473 GAGHNGRPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLGSDLGRPS 294 G G + R + A + P S++SP ++A+ P R+ RSR R GS + S Sbjct: 16 GRGRSSR-RSRDASSDPDPDSASSPSPSSASSPSRSPD------RRSRSRSSGSKRRKAS 68 Query: 293 CRATI*SRLRHHSHRDPASPHMRAGEED 210 + R RHH H+ ++D Sbjct: 69 SSS---RRHRHHHHKSSGRSRRSRDDDD 93
>Os08g0165200:Os08g0165200 | Length = 465 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = -1 Query: 190 PGLSPAASFGGDGGMEGRREAXXXXXXXXLPCRPWRG 80 P L PA+S GG+ G GRR P R RG Sbjct: 53 PALPPASSGGGEAGERGRRRGRLGFSPPEPPARERRG 89
>Os12g0226300:Os12g0226300 | Length = 337 Score = 30.0 bits (66), Expect = 3.0 Identities = 19/55 (34%), Positives = 24/55 (43%) Frame = -3 Query: 458 GRPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLGSDLGRPS 294 GR A PA PS P +P PP + APR+ CR +G RP+ Sbjct: 248 GRRPAAPAA-APSAAPPRGPPRRVPRRP-----PPRRAAPRAGCRHVGRAARRPA 296
>Os01g0242700:Os01g0242700 | Length = 458 Score = 30.0 bits (66), Expect = 3.0 Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Frame = -3 Query: 434 CNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLGSDLGRPSCRATI*SRLRHH- 258 C +T SS AAAT P PP+ AP + RRL + A + LRH Sbjct: 358 CAGAATASSRPSGDAAATPPPAARPPPSAAAPAALSRRLRA--------AALSPHLRHRR 409 Query: 257 ----SHRDPASP 234 S R PA P Sbjct: 410 PPTVSPRAPAPP 421 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -3 Query: 464 HNGRPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSR 330 H P +P P R T P AAT+ R+ P ++ +PR R Sbjct: 407 HRRPPTVSPRAPAPPVRPRTPPL--AATRARRSCSPRSRASPRER 449
>AK103444:Os05g0106000 | Length = 401 Score = 30.0 bits (66), Expect = 3.0 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = -3 Query: 482 PSHGAGHNGRPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPR 336 PS + ATPA +P+T ++T A+TKP TT P A R Sbjct: 213 PSSDKPQSSSKPATPATTKPTTPAATKTTTPASTKP--TTPAPTSFAER 259
>AK068850:Os10g0537300 | Length = 1096 Score = 30.0 bits (66), Expect = 3.0 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 6/54 (11%) Frame = -3 Query: 482 PSHGAGHNGRPEATPACNRPSTRS-STSPFHAAATKPG-----RTTQPPAKDAP 339 P HG H G P PA S+ S S +PF +P R PP D P Sbjct: 3 PYHGDRHRGSPPPYPAAAAHSSLSPSAAPFTVDCPRPAADPRVRNPNPPGLDLP 56
>Os07g0525000:Os07g0525000 | Length = 1532 Score = 29.6 bits (65), Expect = 3.9 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -3 Query: 455 RPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRR 321 R ATP + P ++ HAAA PP PR++CRR Sbjct: 24 RRRATPPPSTPRNAAAACQRHAAAA----VATPPPPSPPRAQCRR 64
>AK119438:Os05g0540100 | Length = 531 Score = 29.6 bits (65), Expect = 3.9 Identities = 20/47 (42%), Positives = 23/47 (48%) Frame = -3 Query: 377 PGRTTQPPAKDAPRSRCRRLGSDLGRPSCRATI*SRLRHHSHRDPAS 237 PGR P APR RR G LGRP RA ++ R R PA+ Sbjct: 24 PGRCA--PRNLAPRQLPRRAGQALGRPRARA---AQPRSEGRRHPAA 65
>AK100285:Os07g0188000 | Length = 1052 Score = 29.6 bits (65), Expect = 3.9 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = -3 Query: 452 PEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLGSDL------GRPS 294 P TPA P+ SS+S AAA +P PPA A + R +G L GRP+ Sbjct: 121 PPPTPAVQIPAVASSSSAQPAAAAQP-----PPAAAAVSALARDVGRQLAVVAGGGRPA 174
>AK061517:Os05g0100700 | Length = 127 Score = 29.6 bits (65), Expect = 3.9 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -3 Query: 470 AGHNGRPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSR 330 A + P ATPA P++ SP +AT P + PP P R Sbjct: 41 AASSSNPNATPADTTPTSPPPASPPLPSATPPLAASPPPPPPPPPPR 87
>AK108548:Os08g0127800 | Length = 257 Score = 29.6 bits (65), Expect = 3.9 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +2 Query: 1004 PWASWWHRRMAGLARIMQIFLHQK 1075 PW WW RR AG+A ++Q +H++ Sbjct: 33 PWRLWW-RRCAGVAAVIQSKIHRR 55
>AK106678:Os11g0702000 | Length = 272 Score = 29.6 bits (65), Expect = 3.9 Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = +1 Query: 337 LGASLAGGCVVRPGLVAAAWKGDVEDLVDGLLHAGVASGRP-----LCPAPCDG*SGGHL 501 +GA G G VAA + E DG++ AGVA G P L PAP DG G Sbjct: 197 VGADAGDGVAGEVGPVAAVAEDGEEGDDDGVVDAGVA-GLPERALVLVPAPEDGELAG-- 253 Query: 502 LRPAGRP*AG*SDLH 546 L RP AG + H Sbjct: 254 LVAGDRPGAGEDEEH 268
>AK103321:Os08g0127800 | Length = 257 Score = 29.6 bits (65), Expect = 3.9 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +2 Query: 1004 PWASWWHRRMAGLARIMQIFLHQK 1075 PW WW RR AG+A ++Q +H++ Sbjct: 33 PWRLWW-RRCAGVAAVIQSKIHRR 55
>AK110025: | Length = 968 Score = 29.3 bits (64), Expect = 5.0 Identities = 17/41 (41%), Positives = 27/41 (65%) Frame = -3 Query: 479 SHGAGHNGRPEATPACNRPSTRSSTSPFHAAATKPGRTTQP 357 S+ +G +G P A+ A + PS+ S+TS +A A++P RT P Sbjct: 836 SNASGRSGSPSASSAASGPSS-SATS--NAMASRPMRTINP 873
>Os09g0270800:Os09g0270800 | Length = 860 Score = 29.3 bits (64), Expect = 5.1 Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 12/92 (13%) Frame = -1 Query: 367 QRSRLPRTRPDPAAAGLDPILVG----RRVAPRSDLG--------CATTRIEIPHHPTCE 224 +R+ L R DP P VG RRV R G CA R + Sbjct: 113 RRAALLRRSVDPDLGDASPDAVGVGLERRVHGRQPRGVGEELLVPCARVRHGLEERHDVA 172 Query: 223 QGRRTSATALCPGLSPAASFGGDGGMEGRREA 128 Q RR + PG GG GG GRR A Sbjct: 173 Q-RRGKLRRIDPGARGGGGGGGGGGGRGRRRA 203
>AK065478:Os06g0154200 | Length = 371 Score = 29.3 bits (64), Expect = 5.1 Identities = 29/84 (34%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Frame = -1 Query: 364 RSRLPRT----RPDPAAAGLDPILVGRRVAPRSDLGCATTRIEIPHHPTCEQGRRTSATA 197 R LPR +P PA AGL P R +AP P HP +G R +A Sbjct: 153 RRLLPRPHHARQPHPALAGLPPPRQARALAP------------APAHPPRRRGSRAAAGD 200 Query: 196 L--CPGLSPAASFGGDGGMEGRRE 131 L PG P D GRRE Sbjct: 201 LRRAPGARPVGVLLLD---RGRRE 221
>Os11g0199800:Os11g0199800 | Length = 1523 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = -3 Query: 473 GAGHNGRPE-ATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRS 333 G G + P +TP PST + T P A+T + PP PR+ Sbjct: 939 GVGSSSSPSVSTPVPEPPSTPTPTHPRATASTATSSSPTPPQPATPRA 986
>Os02g0533700:Os02g0533700 | Length = 214 Score = 28.9 bits (63), Expect = 6.6 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -1 Query: 559 PDDKCEDPITQPKDDQLDGGDGPQ 488 P+D+CED + DD DGG G + Sbjct: 17 PEDECEDEFSGSDDDGEDGGGGSE 40
>AK063119:Os12g0114000 | Length = 99 Score = 28.9 bits (63), Expect = 6.6 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -2 Query: 579 SPTHSQDQMTNVKIRSPSLRTTSWTEEMAPRLAVAWSRAQRPAG 448 SPT Q Q+ + + + S TT+ TEE + ++W R+ +P G Sbjct: 45 SPTPMQPQLKH-ESETASADTTTTTEEQVMQQQLSWLRSMKPRG 87
>AK109833:Os02g0461600 | Length = 199 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = -3 Query: 479 SHGAGHNGRPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRS 333 SH H GR +P R R SP AAAT +P A P+S Sbjct: 78 SHSHSHRGRSSPSPDAGRHKRRRDGSP-AAAATDHKDDKKPEAPVVPKS 125
>AK105240:Os02g0461600 | Length = 199 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = -3 Query: 479 SHGAGHNGRPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRS 333 SH H GR +P R R SP AAAT +P A P+S Sbjct: 78 SHSHSHRGRSSPSPDAGRHKRRRDGSP-AAAATDHKDDKKPEAPVVPKS 125
>Os08g0263600:Os08g0263600 | Length = 509 Score = 28.5 bits (62), Expect = 8.6 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1 Query: 994 EVVSLGVVVASTDGWTSKNNADLSSPKKKK 1083 EVV + S GW SK ++S P KK+ Sbjct: 83 EVVQCKCFMCSRQGWKSKKGNEISDPSKKR 112
>AK106861:Os03g0246100 | Length = 430 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +2 Query: 428 CCMRV-WLPAGRCALLHATANLGAISSVQLVVLRLG 532 C +RV WLPA CAL A A +S LV + G Sbjct: 6 CLLRVGWLPAALCALALALAPASDATSASLVGINYG 41
>AK065035:Os04g0119500 | Length = 400 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -1 Query: 307 LVGRRV-APRSDLGCATTRIEIPHHPTCEQGRRTSATALCPGLSPAASFGGDGGM 146 ++GRR+ A C T + P P C + RR + P S GDG M Sbjct: 210 IIGRRIWASGKTYYCVTKGVPRPSVPRCNKPRRVDVYYSSWCIRPVESRNGDGSM 264
>AK061898:Os04g0119500 | Length = 400 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -1 Query: 307 LVGRRV-APRSDLGCATTRIEIPHHPTCEQGRRTSATALCPGLSPAASFGGDGGM 146 ++GRR+ A C T + P P C + RR + P S GDG M Sbjct: 210 IIGRRIWASGKTYYCVTKGVPRPSVPRCNKPRRVDVYYSSWCIRPVESRNGDGSM 264
>AJ698084:Os04g0119500 | Length = 400 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -1 Query: 307 LVGRRV-APRSDLGCATTRIEIPHHPTCEQGRRTSATALCPGLSPAASFGGDGGM 146 ++GRR+ A C T + P P C + RR + P S GDG M Sbjct: 210 IIGRRIWASGKTYYCVTKGVPRPSVPRCNKPRRVDVYYSSWCIRPVESRNGDGSM 264 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 33,825,513 Number of extensions: 829721 Number of successful extensions: 3457 Number of sequences better than 10.0: 34 Number of HSP's gapped: 3446 Number of HSP's successfully gapped: 37 Length of query: 361 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 259 Effective length of database: 11,315,673 Effective search space: 2930759307 Effective search space used: 2930759307 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
