ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf72a06 |
|---|---|
| Clone Library Name | barley_pub |
>P20186:YT35_STRFR Hypothetical 35.5 kDa protein in transposon Tn4556 - Streptomyces| fradiae Length = 348 Score = 32.7 bits (73), Expect = 2.7 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 7/76 (9%) Frame = -3 Query: 443 TPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSR-------CRRLGSDLGRPSCRA 285 TP+ RPS+R + P AA P RT P A R+R RR S CRA Sbjct: 263 TPSAPRPSSRPARPPIPAARPPPRRTPGTPRPAAARARAPAGCSPARRTPSAPTDRRCRA 322 Query: 284 TI*SRLRHHSHRDPAS 237 R S R PA+ Sbjct: 323 A-----RRGSPRPPAA 333
>Q9QZA2:PDC6I_RAT Programmed cell death 6-interacting protein - Rattus norvegicus| (Rat) Length = 401 Score = 32.3 bits (72), Expect = 3.5 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 455 RPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSR 330 R + P+ P+ +SS + HA A P T PPAK P +R Sbjct: 248 REPSAPSIPPPAYQSSPAGGHATAPTPAPRTMPPAKPQPPAR 289
>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)| Length = 2752 Score = 31.6 bits (70), Expect = 5.9 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = -3 Query: 452 PEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLGSDLGR 300 P + P+ +R ++ + SP P ++ PPA+D PRS SD R Sbjct: 2410 PPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSR 2460
>Q96B18:DACT3_HUMAN Dapper homolog 3 - Homo sapiens (Human)| Length = 629 Score = 31.6 bits (70), Expect = 5.9 Identities = 44/166 (26%), Positives = 55/166 (33%), Gaps = 31/166 (18%) Frame = -3 Query: 482 PSHGAGHNGRPEATPACNRPSTRS---STSPFHAAATKPGRTTQPPAKDAPRS------- 333 P AG + PEA + R + + SP HA A + R P D+P + Sbjct: 190 PYPTAGGSAGPEACSSAERRARAGPFLTPSPLHAVAMRSPRPCGRPPTDSPDAGGAGRPL 249 Query: 332 ---------RCRRLGSDLGRPSCRATI*SRLRHHSHR------DPASPHMRAGEEDXXXX 198 R RR G+ R S R +S R P+ R E Sbjct: 250 DGYISALLRRRRRRGAGQPRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLER 309 Query: 197 XXXXXXXRGVLRR*WRDGREERSA------PAARSG*PPMSPVEGR 78 L R W E +A PAA S PP SP EGR Sbjct: 310 VGGHPTSPAALSRAWASSWESEAAPEPAAPPAAPS--PPDSPAEGR 353
>Q6IQU7:INT12_DANRE Integrator complex subunit 12 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 479 Score = 31.6 bits (70), Expect = 6.0 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -1 Query: 313 PILVGRRVAPRSDLGCATTRIEIPHHPTCEQGRRTSATALCPGLSPAASFGGDGGMEG 140 P+ +G++V RS G + G+ T +L PG +P++S GG+GG G Sbjct: 375 PLTLGKQVLSRSASGDSL-------------GKMTVTGSLSPGAAPSSSLGGNGGSGG 419
>Q8NFT8:DNER_HUMAN Delta and Notch-like epidermal growth factor-related receptor| precursor - Homo sapiens (Human) Length = 737 Score = 31.6 bits (70), Expect = 6.0 Identities = 19/57 (33%), Positives = 24/57 (42%) Frame = -2 Query: 591 DNYVSPTHSQDQMTNVKIRSPSLRTTSWTEEMAPRLAVAWSRAQRPAGSHTRMQQTI 421 D Y+ + + N + PSL T WTE MAPR Q P R Q T+ Sbjct: 117 DGYLCICNEGYEGPNCEQALPSLPATGWTESMAPRQLQPVPATQEPDKILPRSQATV 173
>Q499Z4:ZN672_HUMAN Zinc finger protein 672 - Homo sapiens (Human)| Length = 452 Score = 31.2 bits (69), Expect = 7.8 Identities = 26/76 (34%), Positives = 30/76 (39%) Frame = -3 Query: 455 RPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLGSDLGRPSCRATI* 276 RP P C R + R S FH A P TT PA AP RC + A + Sbjct: 126 RPRRCPLCAR-TFRQSALLFHQARAHPLGTTSDPA--APPHRCAQCPRAF---RSGAGLR 179 Query: 275 SRLRHHSHRDPASPHM 228 S R H R P P + Sbjct: 180 SHARIHVSRSPTRPRV 195
>P23488:OPAP_DROME Male-specific opa-containing protein precursor - Drosophila| melanogaster (Fruit fly) Length = 83 Score = 31.2 bits (69), Expect = 7.8 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -3 Query: 455 RPEATPACNRPSTRSSTSPFHAAATKPGRTTQPPAKDAP 339 RP+ PA N P+ ++ +P AAA P PPA AP Sbjct: 19 RPQEDPA-NLPAPEAAAAPPAAAAAPPAAAAAPPAPPAP 56
>Q7V5M4:IF2_PROMM Translation initiation factor IF-2 - Prochlorococcus marinus| (strain MIT 9313) Length = 1125 Score = 31.2 bits (69), Expect = 7.8 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -3 Query: 428 RPSTRSSTSPFHAAATKPGRTTQPPAKDAPRSRCRRLGSDLGRPS 294 RPST S P A T+P T P P++ R + + + RP+ Sbjct: 118 RPSTESVAHP--APPTRPANPTPTPTSSPPKTAARPINAPISRPA 160
>P44765:ABGA_HAEIN Aminobenzoyl-glutamate utilization protein A homolog - Haemophilus| influenzae Length = 423 Score = 31.2 bits (69), Expect = 7.8 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 Query: 225 SHVG*CGISMRVVAQPRSDRGATRRPTKIGSKPAAAGSGRVLGR 356 SH+ C + V+A PR+ T+ + KPA AG+ LGR Sbjct: 199 SHISFCANTGTVIANPRNFLSTTKIDIRYKGKPAHAGAAPHLGR 242
>Q2W5G0:GLGA_MAGMM Glycogen synthase - Magnetospirillum magneticum (strain AMB-1 /| ATCC 700264) Length = 494 Score = 31.2 bits (69), Expect = 7.8 Identities = 20/55 (36%), Positives = 24/55 (43%) Frame = -2 Query: 570 HSQDQMTNVKIRSPSLRTTSWTEEMAPRLAVAWSRAQRPAGSHTRMQQTIHQILH 406 H + + VK R L W +AP AWS AQRPA TIH I + Sbjct: 124 HLCTENSPVKWRPQVLHANDWQTGLAPAYLHAWSPAQRPATVF-----TIHNIAY 173 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 190,650,818 Number of extensions: 4107775 Number of successful extensions: 12076 Number of sequences better than 10.0: 11 Number of HSP's gapped: 12061 Number of HSP's successfully gapped: 11 Length of query: 361 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 247 Effective length of database: 69,416,809 Effective search space: 17145951823 Effective search space used: 17145951823 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
