ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf72a01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK107716:Os09g0381600 | 84 | 4e-16 | 2 | Os08g0420700:Os08g0420700 | 59 | 2e-08 | 3 | AK108596:Os08g0516600 | 32 | 2.3 | 4 | AK110589:Os05g0493800 | 31 | 3.9 | 5 | AK105557:Os11g0229100 | 31 | 3.9 | 6 | Os03g0624900:Os03g0624900 | 30 | 6.7 | 7 | Os02g0445700:Os02g0445700 | 30 | 6.7 | 8 | AK109997: | 30 | 6.7 | 9 | AK100610:Os08g0280200 | 30 | 6.7 | 10 | AK069036:Os08g0280200 | 30 | 6.7 | 11 | AK063282:Os01g0895200 | 30 | 6.7 | 12 | AK110145:Os09g0535200 | 30 | 8.7 | 13 | AK121372:Os02g0122800 | 30 | 8.8 | 14 | AK065148:Os02g0122800 | 30 | 8.8 | 15 | AK062255:Os02g0122800 | 30 | 8.8 |
|---|
>AK107716:Os09g0381600 | Length = 208 Score = 84.3 bits (207), Expect = 4e-16 Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 6/78 (7%) Frame = +1 Query: 310 KNEKMRRCEAIKQQHNQLRRGD-----GAEQGTSDKVTNAKRGEKDWHRSSG-GTQPAGS 471 KNEKMRRCEAI+QQH QLRRGD E+ + ++ + G++D HRSSG G PA Sbjct: 114 KNEKMRRCEAIRQQHEQLRRGDPLAGVAEEEEEEESASDDQDGKRDRHRSSGAGAPPAAG 173 Query: 472 GRGRHRQPSLESISETAA 525 GRGRH +PSL+SISE A+ Sbjct: 174 GRGRHWRPSLQSISEAAS 191
>Os08g0420700:Os08g0420700 | Length = 189 Score = 58.9 bits (141), Expect = 2e-08 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 5/77 (6%) Frame = +1 Query: 310 KNEKMRRCEAIKQQHN-QLRRGDGAEQGTSDKVTN----AKRGEKDWHRSSGGTQPAGSG 474 + EKMRRC+ + H+ Q + GD A G + + K EKD HRSSGG G G Sbjct: 116 RQEKMRRCKEVTDHHHRQPQTGDSAAAGEEQRRPSDHQERKPAEKDRHRSSGG---GGGG 172 Query: 475 RGRHRQPSLESISETAA 525 RGR+ +PSL+SISE+A+ Sbjct: 173 RGRNWRPSLQSISESAS 189
>AK108596:Os08g0516600 | Length = 126 Score = 32.0 bits (71), Expect = 2.3 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +3 Query: 12 SIPISLPKISMCRRPTPPLTTTAWPRCPAATTYAASHPPPFLPSRSQL 155 S P + P + P PP+ TTA P PA T+ + + P P +R+ L Sbjct: 2 SSPAAAPPGDLVLPPLPPIKTTAPPPPPARTSSSTASPAPSDEARAPL 49
>AK110589:Os05g0493800 | Length = 404 Score = 31.2 bits (69), Expect = 3.9 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Frame = -3 Query: 1117 ASCCLGFMYKSEPY----QMKFGFQSNRLD*GYSYRAYLHHQLLPVQKKCFCALF*VSNL 950 ASCC GFM K++PY ++FG+ + S + H +L V + F + Sbjct: 2 ASCCGGFMEKAKPYFAMICLQFGYAGMNVITKVSLNHGMSHYVLVVYRHAFATISIAPFA 61 Query: 949 LVLQ 938 L+L+ Sbjct: 62 LILE 65
>AK105557:Os11g0229100 | Length = 164 Score = 31.2 bits (69), Expect = 3.9 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +1 Query: 367 RGDGAEQGTSDKVTNAKRGEKDWHRSSGGTQPAGSGRGR 483 R G+E +S T+A+R DW RS+ + +G GR Sbjct: 101 RSAGSESASSGWATSARRLRGDWRRSAASSPTTTAGEGR 139
>Os03g0624900:Os03g0624900 | Length = 164 Score = 30.4 bits (67), Expect = 6.7 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 Query: 27 LPKISMCRRPTPPLTTTAWPRCPAATTYAASHPPPFLP 140 +P + M P PP + A P AT+ A+ P P +P Sbjct: 28 IPALKMALLPAPPTRSLATAPMPVATSPTATSPSPMVP 65
>Os02g0445700:Os02g0445700 | Length = 539 Score = 30.4 bits (67), Expect = 6.7 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = +3 Query: 51 RPTPPLTTTAWPRCPAATTYAASHPPPFLPSRSQLSWMRF 170 RP P T ++ PR AA T A++ PPP LP R S R+ Sbjct: 15 RPPPVATPSSDPRLAAAGTGASTPPPP-LPRRRMWSGWRW 53
>AK109997: | Length = 1028 Score = 30.4 bits (67), Expect = 6.7 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 84 PRCPAATTYAASHPPPFLPSRSQLSWMRFLTDALLSSPWVTC 209 P AA +AA+ PP P S L+ L L++ +VTC Sbjct: 116 PAAAAANNHAAAMRPPSTPDPSHLTHFSLLLSDLVNKAFVTC 157
>AK100610:Os08g0280200 | Length = 893 Score = 30.4 bits (67), Expect = 6.7 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 54 PTPPLTTTAWPRCPAATTYAASHPPP 131 P PPL + + PRC T A+ PPP Sbjct: 267 PPPPLQSPSTPRCSPVRTLASPPPPP 292
>AK069036:Os08g0280200 | Length = 658 Score = 30.4 bits (67), Expect = 6.7 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 54 PTPPLTTTAWPRCPAATTYAASHPPP 131 P PPL + + PRC T A+ PPP Sbjct: 32 PPPPLQSPSTPRCSPVRTLASPPPPP 57
>AK063282:Os01g0895200 | Length = 437 Score = 30.4 bits (67), Expect = 6.7 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = +1 Query: 370 GDGAEQGTSDKVTNAKRGE-KDWHRSSGGTQPAGSGRGRHRQPSLESISETAAG 528 G G G SD GE K H+ SGG G+G R S S TA+G Sbjct: 221 GGGGGGGDSDDGNEGGGGEGKGKHKHSGGDGDGDEGKGGRRTSPSSSSSATASG 274
>AK110145:Os09g0535200 | Length = 861 Score = 30.0 bits (66), Expect = 8.7 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Frame = +3 Query: 9 PSIPISL----PKISMCRRPTPPLTTTAWPRCPAATTYAASHP--PPFLPS 143 P+ P+SL P + R PT P A PR P AA+ P PP LPS Sbjct: 688 PTAPLSLRLPAPHLRARRAPTSP-PAAATPRAPTPPAAAAAAPAAPPALPS 737
>AK121372:Os02g0122800 | Length = 279 Score = 30.0 bits (66), Expect = 8.8 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +1 Query: 370 GDGAEQGTSDKVTNAKRGEKDWHRSSGGTQPAGSGRGRHR 489 G G E+G+ D RG D+HR G P G +G R Sbjct: 211 GRGRERGSPDYGRGGDRGSPDYHR---GASPQGGNKGDER 247
>AK065148:Os02g0122800 | Length = 249 Score = 30.0 bits (66), Expect = 8.8 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +1 Query: 370 GDGAEQGTSDKVTNAKRGEKDWHRSSGGTQPAGSGRGRHR 489 G G E+G+ D RG D+HR G P G +G R Sbjct: 181 GRGRERGSPDYGRGGDRGSPDYHR---GASPQGGNKGDER 217
>AK062255:Os02g0122800 | Length = 279 Score = 30.0 bits (66), Expect = 8.8 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +1 Query: 370 GDGAEQGTSDKVTNAKRGEKDWHRSSGGTQPAGSGRGRHR 489 G G E+G+ D RG D+HR G P G +G R Sbjct: 211 GRGRERGSPDYGRGGDRGSPDYHR---GASPQGGNKGDER 247 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 68,396,242 Number of extensions: 1462278 Number of successful extensions: 4522 Number of sequences better than 10.0: 15 Number of HSP's gapped: 4497 Number of HSP's successfully gapped: 15 Length of query: 896 Length of database: 15,399,855 Length adjustment: 110 Effective length of query: 786 Effective length of database: 10,995,345 Effective search space: 8642341170 Effective search space used: 8642341170 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
