ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf72a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P28955:TEGU_EHV1B Large tegument protein - Equine herpesvirus 1 ... 33 4.8
2P05432:ERRFI_RAT ERBB receptor feedback inhibitor 1 - Rattus nor... 33 8.1
3Q99JZ7:ERRFI_MOUSE ERBB receptor feedback inhibitor 1 - Mus musc... 33 8.1

>P28955:TEGU_EHV1B Large tegument protein - Equine herpesvirus 1 (strain Ab4p) (EHV-1)|
            (Equine abortion virus)
          Length = 3421
 Score = 33.5 bits (75), Expect = 4.8
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = +3

Query: 3    TLPSIPISLPKISMCRRPTPPLTTTAWPRCPAATTYAASHPPPFLP 140
            TLP  P  LP+ +      PP T    P  P +T+ AAS PPP LP
Sbjct: 2548 TLPPAP-PLPQSTSKAASGPPPTLPPAPPLPQSTSKAASGPPPTLP 2592



 Score = 33.5 bits (75), Expect = 4.8
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = +3

Query: 3    TLPSIPISLPKISMCRRPTPPLTTTAWPRCPAATTYAASHPPPFLP 140
            TLP  P  LP+ +      PP T    P  P +T+ AAS PPP LP
Sbjct: 2569 TLPPAP-PLPQSTSKAASGPPPTLPPAPPLPQSTSKAASGPPPTLP 2613



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>P05432:ERRFI_RAT ERBB receptor feedback inhibitor 1 - Rattus norvegicus (Rat)|
          Length = 459

 Score = 32.7 bits (73), Expect = 8.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 1529 AEQNRPVHVEPKPPTSRSNQRQPTPHEL 1446
            ++++RP  V P+ P SRSN R P+P  L
Sbjct: 309  SDEDRPPKVPPREPLSRSNSRTPSPKSL 336



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>Q99JZ7:ERRFI_MOUSE ERBB receptor feedback inhibitor 1 - Mus musculus (Mouse)|
          Length = 461

 Score = 32.7 bits (73), Expect = 8.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 1529 AEQNRPVHVEPKPPTSRSNQRQPTPHEL 1446
            ++++RP  V P+ P SRSN R P+P  L
Sbjct: 310  SDEDRPPKVPPREPLSRSNSRTPSPKSL 337


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 420,545,738
Number of extensions: 8612729
Number of successful extensions: 20272
Number of sequences better than 10.0: 3
Number of HSP's gapped: 20247
Number of HSP's successfully gapped: 4
Length of query: 896
Length of database: 100,686,439
Length adjustment: 122
Effective length of query: 774
Effective length of database: 67,222,449
Effective search space: 52030175526
Effective search space used: 52030175526
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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