ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf72a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT831473.1| Oryza sativa (indica cultivar-group) cDNA clone:... 109 5e-20
2ref|NM_001069596.1| Oryza sativa (japonica cultivar-group) Os09g... 109 5e-20
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 109 5e-20
4dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic D... 109 5e-20
5dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic D... 109 5e-20
6dbj|AK107716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 5e-20
7gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome... 100 5e-17
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 100 5e-17
9gb|AC146893.1| Oryza sativa (japonica cultivar-group) chromosome... 74 3e-09
10gb|AC104615.9| Oryza sativa chromosome 10 BAC OSJNBa0056A15 geno... 74 3e-09
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 74 3e-09
12gb|AC158406.1| Oryza sativa (japonica cultivar-group) chromosome... 74 3e-09
13gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome... 64 3e-06
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-06
15dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-05
16emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510... 60 4e-05
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-04
18dbj|AP004304.5| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-04
19dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-04
20gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15 54 0.003
21gb|DQ244618.1| Zea mays clone 9651 mRNA sequence 48 0.17
22emb|Z46772.1|ZMCRT1GEN Zea mays CRT1 gene for calcium-binding pr... 48 0.17
23emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor 48 0.17
24emb|X78057.1|ZMCRHR Z.mays CRH mRNA 48 0.17
25gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complet... 48 0.17
26gb|AY103855.1| Zea mays PCO074428 mRNA sequence 48 0.17
27gb|AC140356.3| Mus musculus BAC clone RP23-216B19 from 6, comple... 48 0.17
28gb|AC158172.17| Medicago truncatula clone mth2-143b6, complete s... 46 0.66
29gb|AC193857.1| Callithrix jacchus BAC clone CH259-29H12 from chr... 44 2.6
30gb|AC188522.3| Canis Familiaris chromosome 11, clone XX-334N9, c... 44 2.6
31gb|AC166602.2| Eulemur macaco macaco clone CH273-138L3, complete... 44 2.6
32gb|AC149547.26| Medicago truncatula chromosome 8 clone mth2-71b1... 44 2.6
33gb|AC189715.2| Canis Familiaris, clone XX-1I7, complete sequence 44 2.6
34gb|AC187313.3| Canis Familiaris chromosome 11, clone XX-80M13, c... 44 2.6
35gb|AC107452.10| Mus musculus chromosome 15, clone RP23-236C21, c... 44 2.6
36gb|AC162691.2| Mus musculus chromosome 1, clone RP23-263K13, com... 44 2.6
37emb|AL353621.19| Human DNA sequence from clone RP11-490D19 on ch... 44 2.6
38emb|BX649634.8| Zebrafish DNA sequence from clone CH211-284G18 i... 44 2.6
39gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Canc... 44 2.6
40gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete seq... 44 2.6
41gb|AC131750.3| Mus musculus BAC clone RP23-34F5 from 1, complete... 44 2.6
42gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, p... 44 2.6
43gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, p... 44 2.6 
>emb|CT831473.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128I19, full
           insert sequence
          Length = 1018
 Score =  109 bits (55), Expect = 5e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 305 cgaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctcc 364
           ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct: 507 cgaggaagaacgagaagatgcggcggtgcgaggccatcaggcagcagcacgagcagctcc 566

                      
Query: 365 ggcgcggcgac 375
           |||| ||||||
Sbjct: 567 ggcgaggcgac 577



 Score = 50.1 bits (25), Expect = 0.042
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 475 agaggccggcaccggcagccgtccctggagagcatctccga 515
           |||||||||||| ||| |||||| ||| |||||||||||||
Sbjct: 695 agaggccggcactggcggccgtcgctgcagagcatctccga 735
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>ref|NM_001069596.1| Oryza sativa (japonica cultivar-group) Os09g0381600 (Os09g0381600)
           mRNA, complete cds
          Length = 965

 Score =  109 bits (55), Expect = 5e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 305 cgaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctcc 364
           ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct: 481 cgaggaagaacgagaagatgcggcggtgcgaggccatcaggcagcagcacgagcagctcc 540

                      
Query: 365 ggcgcggcgac 375
           |||| ||||||
Sbjct: 541 ggcgaggcgac 551



 Score = 50.1 bits (25), Expect = 0.042
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 475 agaggccggcaccggcagccgtccctggagagcatctccga 515
           |||||||||||| ||| |||||| ||| |||||||||||||
Sbjct: 669 agaggccggcactggcggccgtcgctgcagagcatctccga 709
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score =  109 bits (55), Expect = 5e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                            
Query: 305      cgaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctcc 364
                ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct: 12860495 cgaggaagaacgagaagatgcggcggtgcgaggccatcaggcagcagcacgagcagctcc 12860554

                           
Query: 365      ggcgcggcgac 375
                |||| ||||||
Sbjct: 12860555 ggcgaggcgac 12860565



 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                               
Query: 305     cgaggaagaacgagaagatgcggcggtgcgag 336
               ||||| ||||||||||||||||||||||||||
Sbjct: 9144299 cgaggtagaacgagaagatgcggcggtgcgag 9144268



 Score = 50.1 bits (25), Expect = 0.042
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 475      agaggccggcaccggcagccgtccctggagagcatctccga 515
                |||||||||||| ||| |||||| ||| |||||||||||||
Sbjct: 12860777 agaggccggcactggcggccgtcgctgcagagcatctccga 12860817
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>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0027G10
          Length = 184759

 Score =  109 bits (55), Expect = 5e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                          
Query: 305    cgaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctcc 364
              ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct: 168272 cgaggaagaacgagaagatgcggcggtgcgaggccatcaggcagcagcacgagcagctcc 168331

                         
Query: 365    ggcgcggcgac 375
              |||| ||||||
Sbjct: 168332 ggcgaggcgac 168342



 Score = 50.1 bits (25), Expect = 0.042
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 475    agaggccggcaccggcagccgtccctggagagcatctccga 515
              |||||||||||| ||| |||||| ||| |||||||||||||
Sbjct: 168554 agaggccggcactggcggccgtcgctgcagagcatctccga 168594
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>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0505H05
          Length = 152845

 Score =  109 bits (55), Expect = 5e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                         
Query: 305   cgaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctcc 364
             ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct: 22479 cgaggaagaacgagaagatgcggcggtgcgaggccatcaggcagcagcacgagcagctcc 22538

                        
Query: 365   ggcgcggcgac 375
             |||| ||||||
Sbjct: 22539 ggcgaggcgac 22549



 Score = 50.1 bits (25), Expect = 0.042
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 475   agaggccggcaccggcagccgtccctggagagcatctccga 515
             |||||||||||| ||| |||||| ||| |||||||||||||
Sbjct: 22761 agaggccggcactggcggccgtcgctgcagagcatctccga 22801
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>dbj|AK107716.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-E04, full
           insert sequence
          Length = 965

 Score =  109 bits (55), Expect = 5e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 305 cgaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctcc 364
           ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct: 481 cgaggaagaacgagaagatgcggcggtgcgaggccatcaggcagcagcacgagcagctcc 540

                      
Query: 365 ggcgcggcgac 375
           |||| ||||||
Sbjct: 541 ggcgaggcgac 551



 Score = 50.1 bits (25), Expect = 0.042
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 475 agaggccggcaccggcagccgtccctggagagcatctccga 515
           |||||||||||| ||| |||||| ||| |||||||||||||
Sbjct: 669 agaggccggcactggcggccgtcgctgcagagcatctccga 709
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>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10,
              complete sequence
          Length = 152423

 Score = 99.6 bits (50), Expect = 5e-17
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                          
Query: 306    gaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctccg 365
              ||||||||||||||||||||||||||| |||||||||| ||| |||||| ||||||||||
Sbjct: 122965 gaggaagaacgagaagatgcggcggtgtgaggccatcaggcatcagcacgaccagctccg 123024

                        
Query: 366    gcgcggcgac 375
              ||| ||||||
Sbjct: 123025 gcgaggcgac 123034
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 99.6 bits (50), Expect = 5e-17
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                            
Query: 306      gaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctccg 365
                ||||||||||||||||||||||||||| |||||||||| ||| |||||| ||||||||||
Sbjct: 15855699 gaggaagaacgagaagatgcggcggtgtgaggccatcaggcatcagcacgaccagctccg 15855758

                          
Query: 366      gcgcggcgac 375
                ||| ||||||
Sbjct: 15855759 gcgaggcgac 15855768
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>gb|AC146893.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1107B01,
             complete sequence
          Length = 160104

 Score = 73.8 bits (37), Expect = 3e-09
 Identities = 63/71 (88%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                         
Query: 305   cgaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctcc 364
             ||||||||||||||||||||||| |||||||| |   || |||||||||| |||||||||
Sbjct: 32640 cgaggaagaacgagaagatgcgggggtgcgagcc---caggcagcagcacgaccagctcc 32696

                        
Query: 365   ggcgcggcgac 375
             |||| ||||||
Sbjct: 32697 ggcgaggcgac 32707
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>gb|AC104615.9| Oryza sativa chromosome 10 BAC OSJNBa0056A15 genomic sequence, complete
             sequence
          Length = 150995

 Score = 73.8 bits (37), Expect = 3e-09
 Identities = 63/71 (88%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                         
Query: 305   cgaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctcc 364
             ||||||||||||||||||||||| |||||||| |   || |||||||||| |||||||||
Sbjct: 29667 cgaggaagaacgagaagatgcgggggtgcgagcc---caggcagcagcacgaccagctcc 29611

                        
Query: 365   ggcgcggcgac 375
             |||| ||||||
Sbjct: 29610 ggcgaggcgac 29600
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 73.8 bits (37), Expect = 3e-09
 Identities = 63/71 (88%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                           
Query: 305     cgaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctcc 364
               ||||||||||||||||||||||| |||||||| |   || |||||||||| |||||||||
Sbjct: 6669409 cgaggaagaacgagaagatgcgggggtgcgagcc---caggcagcagcacgaccagctcc 6669465

                          
Query: 365     ggcgcggcgac 375
               |||| ||||||
Sbjct: 6669466 ggcgaggcgac 6669476
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>gb|AC158406.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone P0047E03,
            complete sequence
          Length = 156641

 Score = 73.8 bits (37), Expect = 3e-09
 Identities = 63/71 (88%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                        
Query: 305  cgaggaagaacgagaagatgcggcggtgcgaggccatcaagcagcagcacaaccagctcc 364
            ||||||||||||||||||||||| |||||||| |   || |||||||||| |||||||||
Sbjct: 2686 cgaggaagaacgagaagatgcgggggtgcgagcc---caggcagcagcacgaccagctcc 2742

                       
Query: 365  ggcgcggcgac 375
            |||| ||||||
Sbjct: 2743 ggcgaggcgac 2753
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>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032D10 map E20933S, complete sequence
          Length = 146118

 Score = 63.9 bits (32), Expect = 3e-06
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                             
Query: 305   cgaggaagaacgagaagatgcggcggtgcgag 336
             ||||||||||||||||||||||||||||||||
Sbjct: 96484 cgaggaagaacgagaagatgcggcggtgcgag 96453
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 63.9 bits (32), Expect = 3e-06
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                                
Query: 305      cgaggaagaacgagaagatgcggcggtgcgag 336
                ||||||||||||||||||||||||||||||||
Sbjct: 10472638 cgaggaagaacgagaagatgcggcggtgcgag 10472607
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 60.0 bits (30), Expect = 4e-05
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                              
Query: 305      cgaggaagaacgagaagatgcggcggtgcg 334
                ||||||||||||||||||||||||||||||
Sbjct: 19238821 cgaggaagaacgagaagatgcggcggtgcg 19238792



 Score = 44.1 bits (22), Expect = 2.6
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 330      gtgcgaggccatcaagcagcagcacaaccagctccggcgcggcgac 375
                |||||||||||||| |||||||||| | || |||||| | ||||||
Sbjct: 19235769 gtgcgaggccatcaggcagcagcacgagcaactccggtgaggcgac 19235724
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>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136155

 Score = 60.0 bits (30), Expect = 4e-05
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                           
Query: 305   cgaggaagaacgagaagatgcggcggtgcg 334
             ||||||||||||||||||||||||||||||
Sbjct: 72151 cgaggaagaacgagaagatgcggcggtgcg 72122



 Score = 44.1 bits (22), Expect = 2.6
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 330   gtgcgaggccatcaagcagcagcacaaccagctccggcgcggcgac 375
             |||||||||||||| |||||||||| | || |||||| | ||||||
Sbjct: 69099 gtgcgaggccatcaggcagcagcacgagcaactccggtgaggcgac 69054
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                               
Query: 305     cgaggaagaacgagaagatgcggcggtgcgag 336
               ||||||||||||||||||||||| ||||||||
Sbjct: 9271353 cgaggaagaacgagaagatgcggtggtgcgag 9271322
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>dbj|AP004304.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0483E06
          Length = 159035

 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 305   cgaggaagaacgagaagatgcggcggtgcgag 336
             ||||||||||||||||||||||| ||||||||
Sbjct: 34197 cgaggaagaacgagaagatgcggtggtgcgag 34166
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>dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0035G04
          Length = 155636

 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                              
Query: 305    cgaggaagaacgagaagatgcggcggtgcgag 336
              ||||| ||||||||||||||||||||||||||
Sbjct: 115084 cgaggtagaacgagaagatgcggcggtgcgag 115053
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>gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15
          Length = 89490

 Score = 54.0 bits (27), Expect = 0.003
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 582   ttaacaaatctgtttttcttctcctttctttagtt 616
             ||||||||||| |||||||| ||||||||||||||
Sbjct: 89020 ttaacaaatctttttttcttttcctttctttagtt 89054
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>gb|DQ244618.1| Zea mays clone 9651 mRNA sequence
          Length = 950

 Score = 48.1 bits (24), Expect = 0.17
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1784 agggctatgatgatatttccaaggaaat 1811
            ||||||||||||||||| ||||||||||
Sbjct: 797  agggctatgatgatattcccaaggaaat 824
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>emb|Z46772.1|ZMCRT1GEN Zea mays CRT1 gene for calcium-binding protein
          Length = 1342

 Score = 48.1 bits (24), Expect = 0.17
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1784 agggctatgatgatatttccaaggaaat 1811
            ||||||||||||||||| ||||||||||
Sbjct: 777  agggctatgatgatattcccaaggaaat 804
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>emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor
          Length = 1614

 Score = 48.1 bits (24), Expect = 0.17
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1784 agggctatgatgatatttccaaggaaat 1811
            ||||||||||||||||| ||||||||||
Sbjct: 794  agggctatgatgatattcccaaggaaat 821
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>emb|X78057.1|ZMCRHR Z.mays CRH mRNA
          Length = 1183

 Score = 48.1 bits (24), Expect = 0.17
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1784 agggctatgatgatatttccaaggaaat 1811
            ||||||||||||||||| ||||||||||
Sbjct: 422  agggctatgatgatattcccaaggaaat 449
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>gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complete cds
          Length = 1545

 Score = 48.1 bits (24), Expect = 0.17
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1784 agggctatgatgatatttccaaggaaat 1811
            ||||||||||||||||| ||||||||||
Sbjct: 796  agggctatgatgatattcccaaggaaat 823
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>gb|AY103855.1| Zea mays PCO074428 mRNA sequence
          Length = 1787

 Score = 48.1 bits (24), Expect = 0.17
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1784 agggctatgatgatatttccaaggaaat 1811
            ||||||||||||||||| ||||||||||
Sbjct: 851  agggctatgatgatattcccaaggaaat 878
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>gb|AC140356.3| Mus musculus BAC clone RP23-216B19 from 6, complete sequence
          Length = 211504

 Score = 48.1 bits (24), Expect = 0.17
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 582   ttaacaaatctgtttttcttctcctttcttta 613
             |||| |||||||| ||||||||||||||||||
Sbjct: 89537 ttaaaaaatctgtgtttcttctcctttcttta 89568
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>gb|AC158172.17| Medicago truncatula clone mth2-143b6, complete sequence
          Length = 117641

 Score = 46.1 bits (23), Expect = 0.66
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 1668   atccatatgttgttttaatcatg 1690
              |||||||||||||||||||||||
Sbjct: 101378 atccatatgttgttttaatcatg 101356
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>gb|AC193857.1| Callithrix jacchus BAC clone CH259-29H12 from chromosome unknown,
              complete sequence
          Length = 227695

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 607    ttctttagtttttcttattatt 628
              ||||||||||||||||||||||
Sbjct: 206775 ttctttagtttttcttattatt 206754
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>gb|AC188522.3| Canis Familiaris chromosome 11, clone XX-334N9, complete sequence
          Length = 216423

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1763  ttgatgcacattgttctttgca 1784
             ||||||||||||||||||||||
Sbjct: 80935 ttgatgcacattgttctttgca 80956
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>gb|AC166602.2| Eulemur macaco macaco clone CH273-138L3, complete sequence
          Length = 172515

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2196  tagtagtaagaaatacattggt 2217
             ||||||||||||||||||||||
Sbjct: 90699 tagtagtaagaaatacattggt 90678
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>gb|AC149547.26| Medicago truncatula chromosome 8 clone mth2-71b14, complete sequence
          Length = 88318

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1180  cctatgtttatatattccactttgat 1205
             ||||||||||||||||||| ||||||
Sbjct: 16607 cctatgtttatatattccattttgat 16632
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>gb|AC189715.2| Canis Familiaris, clone XX-1I7, complete sequence
          Length = 211390

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1763  ttgatgcacattgttctttgca 1784
             ||||||||||||||||||||||
Sbjct: 44279 ttgatgcacattgttctttgca 44300
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>gb|AC187313.3| Canis Familiaris chromosome 11, clone XX-80M13, complete sequence
          Length = 173027

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1763  ttgatgcacattgttctttgca 1784
             ||||||||||||||||||||||
Sbjct: 33808 ttgatgcacattgttctttgca 33787
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>gb|AC107452.10| Mus musculus chromosome 15, clone RP23-236C21, complete sequence
          Length = 180069

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1850  ttcttaaacaattttactctct 1871
             ||||||||||||||||||||||
Sbjct: 27260 ttcttaaacaattttactctct 27281
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>gb|AC162691.2| Mus musculus chromosome 1, clone RP23-263K13, complete sequence
          Length = 173327

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 686   cataaaccaaattattattatt 707
             ||||||||||||||||||||||
Sbjct: 73099 cataaaccaaattattattatt 73120
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>emb|AL353621.19| Human DNA sequence from clone RP11-490D19 on chromosome 9 Contains a
              novel pseudogene, the MRPL50 gene for mitochondrial
              ribosomal protein L50, the ZNF189 gene for zinc finger
              protein 189, the ALDOB gene for aldolase B,
              fructose-bisphosphate, a NADH dehydrogenase (ubiquinone) 1
              alpha subcomplex (NDUFA4) pseudogene, three novel genes,
              the 5' end of the RNF20 gene for ring finger protein 20 and
              three CpG islands, complete sequence
          Length = 164115

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 2339   tttcttataaggaaactatata 2360
              ||||||||||||||||||||||
Sbjct: 129311 tttcttataaggaaactatata 129290
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>emb|BX649634.8| Zebrafish DNA sequence from clone CH211-284G18 in linkage group 2,
            complete sequence
          Length = 154030

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 2129 tcatttcaattttgaaacatttcaaa 2154
            |||||||| |||||||||||||||||
Sbjct: 6599 tcatttcatttttgaaacatttcaaa 6574
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>gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166966

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 1143  tgccatcttacctcttcttatgcatgcttg 1172
             |||||| |||||||||||| ||||||||||
Sbjct: 97406 tgccattttacctcttcttgtgcatgcttg 97377
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>gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete sequence
          Length = 113632

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1180  cctatgtttatatattccactttgat 1205
             ||||||||||||||||||| ||||||
Sbjct: 21587 cctatgtttatatattccattttgat 21562
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>gb|AC131750.3| Mus musculus BAC clone RP23-34F5 from 1, complete sequence
          Length = 190325

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 686   cataaaccaaattattattatt 707
             ||||||||||||||||||||||
Sbjct: 24746 cataaaccaaattattattatt 24725
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>gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, partial cds
          Length = 1450

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1784 agggctatgatgatatttccaaggaa 1809
            ||||||||||||||||| ||||||||
Sbjct: 708  agggctatgatgatattcccaaggaa 733
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>gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, partial cds
          Length = 1472

 Score = 44.1 bits (22), Expect = 2.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1784 agggctatgatgatatttccaaggaa 1809
            ||||||||||||||||| ||||||||
Sbjct: 700  agggctatgatgatattcccaaggaa 725


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 540,512,446
Number of extensions: 32587104
Number of successful extensions: 221935
Number of sequences better than 10.0: 43
Number of HSP's gapped: 221931
Number of HSP's successfully gapped: 52
Length of query: 2688
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2665
Effective length of database: 18,503,978,556
Effective search space: 49313102851740
Effective search space used: 49313102851740
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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