ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf75d18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os05g0352700:Os05g0352700 606 e-173
2Os05g0188700:Os05g0188700 31 2.9
3Os05g0149200:Os05g0149200 31 2.9
4AK066260:Os11g0685400 31 2.9
5Os01g0230900:Os01g0230900 31 3.8
6AK066077:Os02g0566300 31 3.8
7Os09g0428300:Os09g0428300 30 5.0
8Os07g0654400:Os07g0654400 30 5.0
9Os01g0330600:Os01g0330600 30 5.0
10Os04g0243500:Os04g0243500 30 6.5
11AK121627:Os03g0111800 30 6.5
12AK111408:Os11g0111000 30 6.5
13AK119387:Os07g0496300 30 8.5
14AK107969:Os07g0264000 30 8.5

>Os05g0352700:Os05g0352700 |
          Length = 1221
 Score =  606 bits (1562), Expect = e-173
 Identities = 320/541 (59%), Positives = 369/541 (68%), Gaps = 10/541 (1%)
 Frame = +1

Query: 28   QADTSPMYDGGGASPDNYXXXXXXXXRIRLVCDDCGAADEYNPDDAQDGFFSCRQCSAVH 207
            Q    PM D GG SP +Y         I LVC+ CG   EY  DDA DGFF+CRQCSA+H
Sbjct: 58   QTKIPPMDDDGGGSPGHYGGGG-----IHLVCEYCGHGSEYAEDDADDGFFTCRQCSAIH 112

Query: 208  TSTQATAADPDDFHVT-GNMSFHRVSQANXXXXXXXXXXXXXXXXXXXXXXXXXFPDLDE 384
            TSTQ TA +P DF +T  ++S HR                              F DL E
Sbjct: 113  TSTQNTATNPFDFPMTPAHLSAHR----RPTQPTPTPKPFPAPRGAATGAAAPDFDDLGE 168

Query: 385  PF---DFVVGAGAWGEPEKLGARVRWRYXXXXXXXXXXXXXXXXKRYRVGALVCGLAGTV 555
            P    DF  GA AWG PE + ARVRWRY                +R+RVG+L   LAGT+
Sbjct: 169  PSEPRDFATGANAWGNPEDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAGTI 228

Query: 556  WVRWVAASKVFDEIWVRKVLV------EDEAAQRLKKCSASGGEQKPQEVKCEWVEEALP 717
            W+RWVAASKVFDE+WV K+L       E  +A + K+    G  QK Q            
Sbjct: 229  WLRWVAASKVFDEMWVHKMLAIAASVEEGHSASKDKQSELEGDAQKSQS----------- 277

Query: 718  RKDRRRVEFIFLRSLRTMLPVYSTLSVCFLACHIAREAILPTDIYRWAMEGRLPYVAAFT 897
                   EF+FLRSLR MLPVYSTL+VCFLACH+ARE ILPTDI RWAMEG+LPYVAAFT
Sbjct: 278  -----SYEFLFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFT 332

Query: 898  EVEKLLGVSLKHCPLSARQLFRPVRVIGAWQLEASAGSIAQRIGLQLPSVNFYAIAQRYL 1077
            +V+KLLG SL  CPLS+RQLFRP RVIGAWQLEA+AGSIAQ+IGL LPSVNFY IAQR+L
Sbjct: 333  QVDKLLGSSLNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFL 392

Query: 1078 NELSLPIERILPHACRIYEWALPAELWLSSNPARVPTRVCVMAILIVALRVQYNINGQGI 1257
             ELSLPIE+ILPHACRIYEWA+PAELWLSSNP RVP+RVCVMAILIVALRV Y INGQGI
Sbjct: 393  KELSLPIEKILPHACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGI 452

Query: 1258 WEEICETGRNADGSDPDANLPPSKRPEGGTSEEFGTRELLCTLASAYDKIDVAHDYSKDL 1437
            WE I +T  NA GSDP+A+ P S  P+   SEEF  RELLCTLA++YDKI+V HDYSK++
Sbjct: 453  WESIAQT-ENAVGSDPEASAPHSIEPDSNNSEEFDARELLCTLAASYDKINVGHDYSKEV 511

Query: 1438 HSYLKYCKDIIFPGIACSVEEDHLIGIFQDMYKGREDGNPKARMEETQTTNEVMNKRCRD 1617
            HSYLKYCKD++F G+  S+EE+HLI IF DMYKG+ED N K   E+ +TTN V NKRCRD
Sbjct: 512  HSYLKYCKDVVFTGMTFSLEEEHLIDIFWDMYKGKEDENAKLCQEKLRTTNGV-NKRCRD 570

Query: 1618 G 1620
            G
Sbjct: 571  G 571



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>Os05g0188700:Os05g0188700 |
          Length = 440

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +3

Query: 204 PHFHPGDCRGSRRFPCHRQHVLPPC*PSQQNPQTPHPRALPN-PLPHSAAP 353
           P    GD  G    P    HV PP    QQ P+ P PR  P  P+PH A P
Sbjct: 126 PRQPEGDAPGGG-VPPRPPHVPPP---QQQPPRRPAPRLAPRPPVPHRARP 172



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>Os05g0149200:Os05g0149200 |
          Length = 1122

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 246  PCHRQHVLPPC*PSQQNPQTPHPRALPNPLP 338
            P    H+ PP  P+QQ P+ P  + LP P P
Sbjct: 945  PAQHPHLQPPARPAQQPPRPPVTQPLPPPPP 975



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>AK066260:Os11g0685400 |
          Length = 227

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
 Frame = +3

Query: 225 CRGSRRFPCHRQHVLPP----C*PSQQNPQTPHPRALPN-PLPHSAAPCRACLS*PRRAV 389
           C  SR   CHR H            +Q PQTP P    + P  H AAPCR   +    AV
Sbjct: 41  CHSSRCCRCHRGHSSRGGRRHSHSHRQTPQTPPPSPHGSRPFLHVAAPCRLTTAATSAAV 100

Query: 390 RLCGWRRG 413
            L   R G
Sbjct: 101 TLSLGRGG 108



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>Os01g0230900:Os01g0230900 |
          Length = 261

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
 Frame = +3

Query: 219 GDCRGSRRFPCHRQHV------LPPC*PSQQNPQTPHPRALPNPLPHSAAPCRACLS*PR 380
           G  RG R  P    H+       PPC    + P+   P ALP P P    PC A    P 
Sbjct: 160 GGRRGRRLRPSRGGHMEGPPSTQPPCPAPPRPPRPSPPPALPTPPPPPRPPCPARRRRP- 218

Query: 381 RAVRLCGWRRGLGRAREAGCSG 446
            A  LC  R    R RE+   G
Sbjct: 219 VAAALCPRRE---RERESARRG 237



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>AK066077:Os02g0566300 |
          Length = 633

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 1636 RSFSASSSEIERIKAEMEDHGFCYLTPRKW 1725
            +  SASS ++  +KA+    G CY+   KW
Sbjct: 410  KRLSASSEKVSALKAQRRAQGLCYICAEKW 439



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>Os09g0428300:Os09g0428300 |
          Length = 698

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +2

Query: 1280 EEMQMGLTLMQIYHHLRGLKAALVRNSAQGNCYALL-QVPMIKLMLRMTIRRTFTLI 1447
            EE+    ++++ YH+   +  AL R S  G   AL+ ++P IKL L    +R +T+I
Sbjct: 563  EELGFPRSMIKPYHNPEDIHNALSRGSKNGGIAALVGEIPYIKLFLAKNCKR-YTMI 618



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>Os07g0654400:Os07g0654400 |
          Length = 1054

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +3

Query: 246 PCHRQHVLPPC*PSQQNPQTPH--PRALPNPLPHSAAP 353
           PCHR HV+ P  P   +P  P     A   P PH+A P
Sbjct: 228 PCHRHHVIAP--PQWPDPYRPDLTSEARDPPPPHTAPP 263



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>Os01g0330600:Os01g0330600 |
          Length = 759

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = +3

Query: 249 CHRQH-VLPPC*PSQQNP--QTPHPRALPNP 332
           C + H  LPP  PS Q+P  Q PHP  LP P
Sbjct: 641 CAKNHPTLPPPPPSPQHPTPQPPHPEPLPPP 671



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>Os04g0243500:Os04g0243500 |
          Length = 1707

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1483 ACSV---EEDHLIGIFQDMYKGREDGNPKARMEETQTTNEVMNKRCRDGTYVGARSFSAS 1653
            ACS+   +E+ L G+ Q   + ++ G     ++   T   V+  R      VGA+S    
Sbjct: 607  ACSLALLQEEALEGVVQSGVRRQDSG---VYVKSRPTPTPVLPTRTTSEDKVGAKSVRTR 663

Query: 1654 SSEIERIKAEMEDHGFCYLTPRKW 1725
              ++  +K+     G C+ +  +W
Sbjct: 664  EDKLLALKSYRRSKGLCFKSGERW 687



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>AK121627:Os03g0111800 |
          Length = 1331

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
 Frame = +1

Query: 1606 RCRDGTYVGARS---FSASSSEIERIKAEMEDHGFCYLTPRKWLRSNGYLHYRRK---II 1767
            RC DG   G  +   F     +I RI+A+ ED   C +      R  G+ H+      + 
Sbjct: 66   RCPDGPSPGDVTVLVFGERRVKIFRIRADFEDGEACGVRLELEQRLPGFDHWVLDACFLE 125

Query: 1768 TGSLVCIGHADYYVLIRSFAKLAEVDVRVLHTSVLKLERRLAWIEERIGNSLGCL 1932
               L+ IG +D  V       L ++  RVLH  V   E+ L +     GNSL  L
Sbjct: 126  ADGLLAIGLSDNSVA------LWDLSQRVLHARVKSPEKCLLYSMRMWGNSLESL 174



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>AK111408:Os11g0111000 |
          Length = 252

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 10/52 (19%)
 Frame = +3

Query: 228 RGSRRFPCHRQHVLPPC*PSQQNPQTP----------HPRALPNPLPHSAAP 353
           R +R  P  R H LPPC P +++  +P           P A P PLP +  P
Sbjct: 99  RRARSHPAGRTHPLPPC-PRRRSASSPVPLPAAMPLLFPAATPLPLPAALPP 149



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>AK119387:Os07g0496300 |
          Length = 252

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 285 SQQNPQTPHPRALPNPLPHSAAPCRACLS*PRRAVR 392
           S  +P +P  RA P+P   S+AP R     PR  +R
Sbjct: 98  SSASPTSPRTRATPSPAASSSAPSRDSAKNPRSRLR 133



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>AK107969:Os07g0264000 |
          Length = 89

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = +3

Query: 276 C*PSQQNPQTPHPRALPNPLPHSAAPCRACLS*P 377
           C    + P  P+PR LP PL HSA   RA LS P
Sbjct: 14  CFSPHRAPAMPYPRPLPPPL-HSAPAQRAVLSTP 46


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 62,364,444
Number of extensions: 1501882
Number of successful extensions: 5198
Number of sequences better than 10.0: 14
Number of HSP's gapped: 5170
Number of HSP's successfully gapped: 15
Length of query: 688
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 581
Effective length of database: 11,115,468
Effective search space: 6458086908
Effective search space used: 6458086908
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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