ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf75d18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome... 434 e-118
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 434 e-118
3ref|NM_001061814.1| Oryza sativa (japonica cultivar-group) Os05g... 432 e-117
4ref|XM_001190065.1| PREDICTED: Strongylocentrotus purpuratus sim... 48 0.13
5ref|XM_782324.2| PREDICTED: Strongylocentrotus purpuratus simila... 48 0.13
6gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.13
7gb|AC137747.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.13
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.13
9dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.13
10dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.13
11gb|AC005180.3| Homo sapiens chromosome 17, clone CTC-296K1, comp... 46 0.51
12dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.51
13ref|NM_001056264.1| Oryza sativa (japonica cultivar-group) Os03g... 44 2.0
14gb|DQ822519.2| Homo sapiens TNNI3 interacting kinase (TNNI3K) ge... 44 2.0
15gb|AC116773.8| Mus musculus chromosome 1, clone RP23-430H21, com... 44 2.0
16gb|AC110743.4| Homo sapiens chromosome 18, clone CTD-3153M21, co... 44 2.0
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 2.0
18gb|AC093158.2| Homo sapiens chromosome 1 clone RP11-439H8, compl... 44 2.0
19gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 44 2.0
20ref|NM_001069093.1| Oryza sativa (japonica cultivar-group) Os09g... 42 7.9
21ref|NM_001062101.1| Oryza sativa (japonica cultivar-group) Os05g... 42 7.9
22gb|AC154301.2| Mus musculus BAC clone RP23-392P5 from chromosome... 42 7.9
23gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome... 42 7.9
24gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome... 42 7.9
25gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, co... 42 7.9
26gb|AY810594.1| Schistosoma japonicum SJCHGC05235 protein mRNA, p... 42 7.9
27gb|AC092908.9| Homo sapiens 3q BAC RP11-757I12 (Roswell Park Can... 42 7.9
28gb|AE005685.1| Caulobacter crescentus CB15 section 11 of 359 of ... 42 7.9
29emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 i... 42 7.9
30dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 7.9
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 7.9
32emb|AL356288.15| Human DNA sequence from clone RP11-6E3 on chrom... 42 7.9
33emb|AL135923.15| Human DNA sequence from clone RP11-29B9 on chro... 42 7.9
34dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 7.9
35gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 7.9
36gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosom... 42 7.9
37dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic D... 42 7.9
38dbj|AP005909.2| Oryza sativa (japonica cultivar-group) genomic D... 42 7.9
39dbj|AK071092.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 7.9
40dbj|AK066648.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 7.9
41gb|AC154667.2| Mus musculus BAC clone RP23-153F8 from 16, comple... 42 7.9
42emb|AL953877.5| Zebrafish DNA sequence from clone CH211-188M3, c... 42 7.9 
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183
 Score =  434 bits (219), Expect = e-118
 Identities = 450/527 (85%)
 Strand = Plus / Plus

                                                                         
Query: 738   tgagttcatctttctgcgctcattgagaacgatgctgccagtatactcaacattgtctgt 797
             ||||||| | ||||||||||||||||| | ||||||||| || ||||||||| || ||||
Sbjct: 26836 tgagttcttgtttctgcgctcattgaggatgatgctgcctgtgtactcaacactggctgt 26895

                                                                         
Query: 798   atgtttcctggcctgtcatattgcccgggaagccatcctaccaactgacatttacaggtg 857
              |||||||| ||||||||| | || |||||| ||||||||||||||||||||| ||||||
Sbjct: 26896 ctgtttccttgcctgtcatgtcgcgcgggaaaccatcctaccaactgacatttgcaggtg 26955

                                                                         
Query: 858   ggcaatggaaggtaggcttccttatgtggcagcatttaccgaagtagagaagcttcttgg 917
             ||||||||| || | |||||||||||||||||| |||||| |||| || |||||||||||
Sbjct: 26956 ggcaatggaggggaagcttccttatgtggcagcgtttacccaagtcgacaagcttcttgg 27015

                                                                         
Query: 918   ggtctctttaaaacactgccctttgagtgcaagacaactattcaggccagtccgagtgat 977
                 ||||||||  ||||||| |||||| || | || ||||| ||||||   ||||||||
Sbjct: 27016 aagttctttaaacgactgcccgttgagttcacggcagctatttaggccaactcgagtgat 27075

                                                                         
Query: 978   tggagcatggcaactggaagcttcagctgggtccatagcacaacgaataggattgcagct 1037
             |||||||||||| ||||||||| |||||||||||||||| |||   |||||| ||  |||
Sbjct: 27076 tggagcatggcagctggaagctgcagctgggtccatagcgcaaaagataggactgttgct 27135

                                                                         
Query: 1038  tccttctgttaatttctatgctattgctcaacgctacttgaatgagttgtctctgccgat 1097
             ||||||||||||||||||    |||||||| |||| |||||| ||||| ||||| || ||
Sbjct: 27136 tccttctgttaatttctacttgattgctcagcgcttcttgaaggagttatctcttccaat 27195

                                                                         
Query: 1098  agaaagaatactccctcatgcttgccgcatctatgagtgggcattgcctgcagaactatg 1157
              |||| ||| || |||||||| || |||||||||||||||||| ||||||||||||| ||
Sbjct: 27196 tgaaaaaatccttcctcatgcatgtcgcatctatgagtgggcaatgcctgcagaactttg 27255

                                                                         
Query: 1158  gttgtctagtaatccagcaagggtccccacacgggtctgtgtaatggctatactaattgt 1217
             |||||| |||||||| |  ||||| ||| ||||||| |||||||||||||||||||| ||
Sbjct: 27256 gttgtccagtaatcctggcagggtaccctcacgggtttgtgtaatggctatactaatagt 27315

                                                            
Query: 1218  ggctctaagagttcagtataacatcaatggtcaagggatatgggagg 1264
             |||||||||||||| ||||  |||||| || ||||||||||||||||
Sbjct: 27316 ggctctaagagttctgtatggcatcaacggacaagggatatgggagg 27362



 Score =  115 bits (58), Expect = 7e-22
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                         
Query: 1791  acatgctgattattacgtgttgatacgctcgtttgcaaagcttgcagaagttgatgttag 1850
             |||||||||||||||| | ||| ||||  | |||||||||||||||||||||||||||||
Sbjct: 30087 acatgctgattattacatattgctacgtccttttgcaaagcttgcagaagttgatgttag 30146

                                                                   
Query: 1851  ggttctgcataccagtgtgctaaaacttgagaggagacttgcctggatagaaga 1904
              ||| |||| |  |||||| ||||||||||||||||||| | ||||||||||||
Sbjct: 30147 agttttgcacagtagtgtgttaaaacttgagaggagactaggctggatagaaga 30200



 Score = 95.6 bits (48), Expect = 6e-16
 Identities = 137/164 (83%), Gaps = 2/164 (1%)
 Strand = Plus / Plus

                                                                         
Query: 442   cgggtccggtggcgctacgttcaggggctgcaggtgatcctgcaacagcagctggaagtg 501
             |||||||||||||||||||| | ||||||||||||||||||||| | ||||||||| | |
Sbjct: 26484 cgggtccggtggcgctacgtgcgggggctgcaggtgatcctgcagcggcagctggaggcg 26543

                                                                         
Query: 502   ctggtcaagaggtaccgggtgggcgcgcttgtctgc-ggcctggctggaactgtctgggt 560
             |||||  || |  ||||||||||| |||| | | ||  |||| || || ||  ||||| |
Sbjct: 26544 ctggtggagcgtcaccgggtgggctcgctcg-cggctagcctcgcgggcaccatctggct 26602

                                                         
Query: 561   gcggtgggttgctgcctccaaggtgttcgacgaaatttgggtgc 604
             ||||||||| || || |||||||||||||||||||| |||||||
Sbjct: 26603 gcggtgggtggccgcgtccaaggtgttcgacgaaatgtgggtgc 26646



 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 157   gacgacgcccaggacggcttcttctcgtgccgccagtgctccgctgtccacacttccacc 216
             ||||||||| | |||||||||||| ||||||| |||||||||||  ||||||| ||||||
Sbjct: 26199 gacgacgccgacgacggcttcttcacgtgccggcagtgctccgccatccacacctccacc 26258

                
Query: 217   cag 219
             |||
Sbjct: 26259 cag 26261



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                         
Query: 1420  gactattcgaaggaccttcactcttatctcaaatactgcaaagatatcattttccctggg 1479
             ||||||||||||||  |||| |||||||| || |||||||||||| |  ||||  |||| 
Sbjct: 28926 gactattcgaaggaagttcattcttatctaaagtactgcaaagatgtggtttttactgga 28985

                                                                        
Query: 1480  attgcatgttcagttgaagaggatcacttaatagggatcttccaggatatgtacaaagg 1538
             ||  ||| |||| | |||||||| || |||||||  |||||   |||||||||||||||
Sbjct: 28986 atgacattttcactagaagaggagcatttaatagatatcttttgggatatgtacaaagg 29044
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  434 bits (219), Expect = e-118
 Identities = 450/527 (85%)
 Strand = Plus / Plus

                                                                            
Query: 738      tgagttcatctttctgcgctcattgagaacgatgctgccagtatactcaacattgtctgt 797
                ||||||| | ||||||||||||||||| | ||||||||| || ||||||||| || ||||
Sbjct: 16528097 tgagttcttgtttctgcgctcattgaggatgatgctgcctgtgtactcaacactggctgt 16528156

                                                                            
Query: 798      atgtttcctggcctgtcatattgcccgggaagccatcctaccaactgacatttacaggtg 857
                 |||||||| ||||||||| | || |||||| ||||||||||||||||||||| ||||||
Sbjct: 16528157 ctgtttccttgcctgtcatgtcgcgcgggaaaccatcctaccaactgacatttgcaggtg 16528216

                                                                            
Query: 858      ggcaatggaaggtaggcttccttatgtggcagcatttaccgaagtagagaagcttcttgg 917
                ||||||||| || | |||||||||||||||||| |||||| |||| || |||||||||||
Sbjct: 16528217 ggcaatggaggggaagcttccttatgtggcagcgtttacccaagtcgacaagcttcttgg 16528276

                                                                            
Query: 918      ggtctctttaaaacactgccctttgagtgcaagacaactattcaggccagtccgagtgat 977
                    ||||||||  ||||||| |||||| || | || ||||| ||||||   ||||||||
Sbjct: 16528277 aagttctttaaacgactgcccgttgagttcacggcagctatttaggccaactcgagtgat 16528336

                                                                            
Query: 978      tggagcatggcaactggaagcttcagctgggtccatagcacaacgaataggattgcagct 1037
                |||||||||||| ||||||||| |||||||||||||||| |||   |||||| ||  |||
Sbjct: 16528337 tggagcatggcagctggaagctgcagctgggtccatagcgcaaaagataggactgttgct 16528396

                                                                            
Query: 1038     tccttctgttaatttctatgctattgctcaacgctacttgaatgagttgtctctgccgat 1097
                ||||||||||||||||||    |||||||| |||| |||||| ||||| ||||| || ||
Sbjct: 16528397 tccttctgttaatttctacttgattgctcagcgcttcttgaaggagttatctcttccaat 16528456

                                                                            
Query: 1098     agaaagaatactccctcatgcttgccgcatctatgagtgggcattgcctgcagaactatg 1157
                 |||| ||| || |||||||| || |||||||||||||||||| ||||||||||||| ||
Sbjct: 16528457 tgaaaaaatccttcctcatgcatgtcgcatctatgagtgggcaatgcctgcagaactttg 16528516

                                                                            
Query: 1158     gttgtctagtaatccagcaagggtccccacacgggtctgtgtaatggctatactaattgt 1217
                |||||| |||||||| |  ||||| ||| ||||||| |||||||||||||||||||| ||
Sbjct: 16528517 gttgtccagtaatcctggcagggtaccctcacgggtttgtgtaatggctatactaatagt 16528576

                                                               
Query: 1218     ggctctaagagttcagtataacatcaatggtcaagggatatgggagg 1264
                |||||||||||||| ||||  |||||| || ||||||||||||||||
Sbjct: 16528577 ggctctaagagttctgtatggcatcaacggacaagggatatgggagg 16528623



 Score =  115 bits (58), Expect = 7e-22
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1791     acatgctgattattacgtgttgatacgctcgtttgcaaagcttgcagaagttgatgttag 1850
                |||||||||||||||| | ||| ||||  | |||||||||||||||||||||||||||||
Sbjct: 16531348 acatgctgattattacatattgctacgtccttttgcaaagcttgcagaagttgatgttag 16531407

                                                                      
Query: 1851     ggttctgcataccagtgtgctaaaacttgagaggagacttgcctggatagaaga 1904
                 ||| |||| |  |||||| ||||||||||||||||||| | ||||||||||||
Sbjct: 16531408 agttttgcacagtagtgtgttaaaacttgagaggagactaggctggatagaaga 16531461



 Score = 95.6 bits (48), Expect = 6e-16
 Identities = 137/164 (83%), Gaps = 2/164 (1%)
 Strand = Plus / Plus

                                                                            
Query: 442      cgggtccggtggcgctacgttcaggggctgcaggtgatcctgcaacagcagctggaagtg 501
                |||||||||||||||||||| | ||||||||||||||||||||| | ||||||||| | |
Sbjct: 16527745 cgggtccggtggcgctacgtgcgggggctgcaggtgatcctgcagcggcagctggaggcg 16527804

                                                                            
Query: 502      ctggtcaagaggtaccgggtgggcgcgcttgtctgc-ggcctggctggaactgtctgggt 560
                |||||  || |  ||||||||||| |||| | | ||  |||| || || ||  ||||| |
Sbjct: 16527805 ctggtggagcgtcaccgggtgggctcgctcg-cggctagcctcgcgggcaccatctggct 16527863

                                                            
Query: 561      gcggtgggttgctgcctccaaggtgttcgacgaaatttgggtgc 604
                ||||||||| || || |||||||||||||||||||| |||||||
Sbjct: 16527864 gcggtgggtggccgcgtccaaggtgttcgacgaaatgtgggtgc 16527907



 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                            
Query: 157      gacgacgcccaggacggcttcttctcgtgccgccagtgctccgctgtccacacttccacc 216
                ||||||||| | |||||||||||| ||||||| |||||||||||  ||||||| ||||||
Sbjct: 16527460 gacgacgccgacgacggcttcttcacgtgccggcagtgctccgccatccacacctccacc 16527519

                   
Query: 217      cag 219
                |||
Sbjct: 16527520 cag 16527522



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                            
Query: 1420     gactattcgaaggaccttcactcttatctcaaatactgcaaagatatcattttccctggg 1479
                ||||||||||||||  |||| |||||||| || |||||||||||| |  ||||  |||| 
Sbjct: 16530187 gactattcgaaggaagttcattcttatctaaagtactgcaaagatgtggtttttactgga 16530246

                                                                           
Query: 1480     attgcatgttcagttgaagaggatcacttaatagggatcttccaggatatgtacaaagg 1538
                ||  ||| |||| | |||||||| || |||||||  |||||   |||||||||||||||
Sbjct: 16530247 atgacattttcactagaagaggagcatttaatagatatcttttgggatatgtacaaagg 16530305



 Score = 48.1 bits (24), Expect = 0.13
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 82       ggaggaggcggcggcgaaggaggaagaa 109
                |||||||||||||||| |||||||||||
Sbjct: 15117870 ggaggaggcggcggcggaggaggaagaa 15117897



 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 82       ggaggaggcggcggcgaaggaggaa 106
                |||||||||||||||| ||||||||
Sbjct: 20333174 ggaggaggcggcggcggaggaggaa 20333150
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>ref|NM_001061814.1| Oryza sativa (japonica cultivar-group) Os05g0352700 (Os05g0352700)
            mRNA, complete cds
          Length = 3666

 Score =  432 bits (218), Expect = e-117
 Identities = 449/526 (85%)
 Strand = Plus / Plus

                                                                        
Query: 738  tgagttcatctttctgcgctcattgagaacgatgctgccagtatactcaacattgtctgt 797
            ||||||| | ||||||||||||||||| | ||||||||| || ||||||||| || ||||
Sbjct: 837  tgagttcttgtttctgcgctcattgaggatgatgctgcctgtgtactcaacactggctgt 896

                                                                        
Query: 798  atgtttcctggcctgtcatattgcccgggaagccatcctaccaactgacatttacaggtg 857
             |||||||| ||||||||| | || |||||| ||||||||||||||||||||| ||||||
Sbjct: 897  ctgtttccttgcctgtcatgtcgcgcgggaaaccatcctaccaactgacatttgcaggtg 956

                                                                        
Query: 858  ggcaatggaaggtaggcttccttatgtggcagcatttaccgaagtagagaagcttcttgg 917
            ||||||||| || | |||||||||||||||||| |||||| |||| || |||||||||||
Sbjct: 957  ggcaatggaggggaagcttccttatgtggcagcgtttacccaagtcgacaagcttcttgg 1016

                                                                        
Query: 918  ggtctctttaaaacactgccctttgagtgcaagacaactattcaggccagtccgagtgat 977
                ||||||||  ||||||| |||||| || | || ||||| ||||||   ||||||||
Sbjct: 1017 aagttctttaaacgactgcccgttgagttcacggcagctatttaggccaactcgagtgat 1076

                                                                        
Query: 978  tggagcatggcaactggaagcttcagctgggtccatagcacaacgaataggattgcagct 1037
            |||||||||||| ||||||||| |||||||||||||||| |||   |||||| ||  |||
Sbjct: 1077 tggagcatggcagctggaagctgcagctgggtccatagcgcaaaagataggactgttgct 1136

                                                                        
Query: 1038 tccttctgttaatttctatgctattgctcaacgctacttgaatgagttgtctctgccgat 1097
            ||||||||||||||||||    |||||||| |||| |||||| ||||| ||||| || ||
Sbjct: 1137 tccttctgttaatttctacttgattgctcagcgcttcttgaaggagttatctcttccaat 1196

                                                                        
Query: 1098 agaaagaatactccctcatgcttgccgcatctatgagtgggcattgcctgcagaactatg 1157
             |||| ||| || |||||||| || |||||||||||||||||| ||||||||||||| ||
Sbjct: 1197 tgaaaaaatccttcctcatgcatgtcgcatctatgagtgggcaatgcctgcagaactttg 1256

                                                                        
Query: 1158 gttgtctagtaatccagcaagggtccccacacgggtctgtgtaatggctatactaattgt 1217
            |||||| |||||||| |  ||||| ||| ||||||| |||||||||||||||||||| ||
Sbjct: 1257 gttgtccagtaatcctggcagggtaccctcacgggtttgtgtaatggctatactaatagt 1316

                                                          
Query: 1218 ggctctaagagttcagtataacatcaatggtcaagggatatgggag 1263
            |||||||||||||| ||||  |||||| || |||||||||||||||
Sbjct: 1317 ggctctaagagttctgtatggcatcaacggacaagggatatgggag 1362



 Score = 95.6 bits (48), Expect = 6e-16
 Identities = 137/164 (83%), Gaps = 2/164 (1%)
 Strand = Plus / Plus

                                                                       
Query: 442 cgggtccggtggcgctacgttcaggggctgcaggtgatcctgcaacagcagctggaagtg 501
           |||||||||||||||||||| | ||||||||||||||||||||| | ||||||||| | |
Sbjct: 571 cgggtccggtggcgctacgtgcgggggctgcaggtgatcctgcagcggcagctggaggcg 630

                                                                       
Query: 502 ctggtcaagaggtaccgggtgggcgcgcttgtctgc-ggcctggctggaactgtctgggt 560
           |||||  || |  ||||||||||| |||| | | ||  |||| || || ||  ||||| |
Sbjct: 631 ctggtggagcgtcaccgggtgggctcgctcg-cggctagcctcgcgggcaccatctggct 689

                                                       
Query: 561 gcggtgggttgctgcctccaaggtgttcgacgaaatttgggtgc 604
           ||||||||| || || |||||||||||||||||||| |||||||
Sbjct: 690 gcggtgggtggccgcgtccaaggtgttcgacgaaatgtgggtgc 733



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 147/183 (80%)
 Strand = Plus / Plus

                                                                        
Query: 1378 tgcactcttgcaagtgcctatgataaaattgatgttgcgcatgactattcgaaggacctt 1437
            ||||||||||||  | | |||||||||||  ||||||  |||||||||||||||||  ||
Sbjct: 1474 tgcactcttgcagcttcttatgataaaatcaatgttggacatgactattcgaaggaagtt 1533

                                                                        
Query: 1438 cactcttatctcaaatactgcaaagatatcattttccctgggattgcatgttcagttgaa 1497
            || |||||||| || |||||||||||| |  ||||  |||| ||  ||| |||| | |||
Sbjct: 1534 cattcttatctaaagtactgcaaagatgtggtttttactggaatgacattttcactagaa 1593

                                                                        
Query: 1498 gaggatcacttaatagggatcttccaggatatgtacaaaggacgagaggatgggaatcca 1557
            ||||| || |||||||  |||||   |||||||||||||||   |||||||| |||| ||
Sbjct: 1594 gaggagcatttaatagatatcttttgggatatgtacaaagggaaagaggatgagaatgca 1653

               
Query: 1558 aaa 1560
            |||
Sbjct: 1654 aaa 1656



 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                       
Query: 157 gacgacgcccaggacggcttcttctcgtgccgccagtgctccgctgtccacacttccacc 216
           ||||||||| | |||||||||||| ||||||| |||||||||||  ||||||| ||||||
Sbjct: 286 gacgacgccgacgacggcttcttcacgtgccggcagtgctccgccatccacacctccacc 345

              
Query: 217 cag 219
           |||
Sbjct: 346 cag 348
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>ref|XM_001190065.1| PREDICTED: Strongylocentrotus purpuratus similar to smad nuclear
            interacting protein (LOC582372), mRNA
          Length = 3030

 Score = 48.1 bits (24), Expect = 0.13
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 1823 ttgcaaagcttgcagaagttgatg 1846
            ||||||||||||||||||||||||
Sbjct: 1742 ttgcaaagcttgcagaagttgatg 1765
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>ref|XM_782324.2| PREDICTED: Strongylocentrotus purpuratus similar to smad nuclear
            interacting protein (LOC582372), mRNA
          Length = 3030

 Score = 48.1 bits (24), Expect = 0.13
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 1823 ttgcaaagcttgcagaagttgatg 1846
            ||||||||||||||||||||||||
Sbjct: 1742 ttgcaaagcttgcagaagttgatg 1765
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>gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0076A09,
              complete sequence
          Length = 157010

 Score = 48.1 bits (24), Expect = 0.13
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 82     ggaggaggcggcggcgaaggaggaagaa 109
              |||||||||||||||| |||||||||||
Sbjct: 146620 ggaggaggcggcggcggaggaggaagaa 146647
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>gb|AC137747.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0051L16, complete sequence
          Length = 175461

 Score = 48.1 bits (24), Expect = 0.13
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 82    ggaggaggcggcggcgaaggaggaagaa 109
             |||||||||||||||| |||||||||||
Sbjct: 50439 ggaggaggcggcggcggaggaggaagaa 50466
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.13
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 82       ggaggaggcggcggcgaaggagga 105
                ||||||||||||||||||||||||
Sbjct: 15914705 ggaggaggcggcggcgaaggagga 15914682



 Score = 46.1 bits (23), Expect = 0.51
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 575      cctccaaggtgttcgacgaaatt 597
                |||||||||||||||||||||||
Sbjct: 25776847 cctccaaggtgttcgacgaaatt 25776825
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>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 48.1 bits (24), Expect = 0.13
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 82    ggaggaggcggcggcgaaggagga 105
             ||||||||||||||||||||||||
Sbjct: 48154 ggaggaggcggcggcgaaggagga 48131
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>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0026P23
          Length = 180188

 Score = 48.1 bits (24), Expect = 0.13
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 82     ggaggaggcggcggcgaaggagga 105
              ||||||||||||||||||||||||
Sbjct: 127708 ggaggaggcggcggcgaaggagga 127685
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>gb|AC005180.3| Homo sapiens chromosome 17, clone CTC-296K1, complete sequence
          Length = 126610

 Score = 46.1 bits (23), Expect = 0.51
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1571  aggaaacacaaaccacaaatgaa 1593
             |||||||||||||||||||||||
Sbjct: 82072 aggaaacacaaaccacaaatgaa 82094
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>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0416A11
          Length = 171519

 Score = 46.1 bits (23), Expect = 0.51
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 575   cctccaaggtgttcgacgaaatt 597
             |||||||||||||||||||||||
Sbjct: 59051 cctccaaggtgttcgacgaaatt 59029
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>ref|NM_001056264.1| Oryza sativa (japonica cultivar-group) Os03g0278800 (Os03g0278800)
           mRNA, complete cds
          Length = 522

 Score = 44.1 bits (22), Expect = 2.0
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 83  gaggaggcggcggcgaaggaggaaga 108
           ||||||||||||||| ||||||||||
Sbjct: 80  gaggaggcggcggcggaggaggaaga 55
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>gb|DQ822519.2| Homo sapiens TNNI3 interacting kinase (TNNI3K) gene, complete cds
          Length = 312986

 Score = 44.1 bits (22), Expect = 2.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 922   tctttaaaacactgccctttga 943
             ||||||||||||||||||||||
Sbjct: 99462 tctttaaaacactgccctttga 99483
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>gb|AC116773.8| Mus musculus chromosome 1, clone RP23-430H21, complete sequence
          Length = 210414

 Score = 44.1 bits (22), Expect = 2.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1979   ttcttttcagcaaaaggaaatg 2000
              ||||||||||||||||||||||
Sbjct: 158865 ttcttttcagcaaaaggaaatg 158886
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>gb|AC110743.4| Homo sapiens chromosome 18, clone CTD-3153M21, complete sequence
          Length = 78507

 Score = 44.1 bits (22), Expect = 2.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 546   tggaactgtctgggtgcggtgg 567
             ||||||||||||||||||||||
Sbjct: 78086 tggaactgtctgggtgcggtgg 78107
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 44.1 bits (22), Expect = 2.0
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 83      gaggaggcggcggcgaaggaggaaga 108
               ||||||||||||||| ||||||||||
Sbjct: 9460767 gaggaggcggcggcggaggaggaaga 9460792
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>gb|AC093158.2| Homo sapiens chromosome 1 clone RP11-439H8, complete sequence
          Length = 179582

 Score = 44.1 bits (22), Expect = 2.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 922   tctttaaaacactgccctttga 943
             ||||||||||||||||||||||
Sbjct: 78149 tctttaaaacactgccctttga 78170
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 44.1 bits (22), Expect = 2.0
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 83     gaggaggcggcggcgaaggaggaaga 108
              ||||||||||||||| ||||||||||
Sbjct: 160046 gaggaggcggcggcggaggaggaaga 160071
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>ref|NM_001069093.1| Oryza sativa (japonica cultivar-group) Os09g0103700 (Os09g0103700)
           mRNA, complete cds
          Length = 1460

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 81  cggaggaggcggcggcgaaggagga 105
           ||||||||||||||||| |||||||
Sbjct: 343 cggaggaggcggcggcggaggagga 319
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>ref|NM_001062101.1| Oryza sativa (japonica cultivar-group) Os05g0418000 (Os05g0418000)
           mRNA, complete cds
          Length = 1761

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 82  ggaggaggcggcggcgaaggaggaa 106
           |||||||||||||||| ||||||||
Sbjct: 45  ggaggaggcggcggcggaggaggaa 21
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>gb|AC154301.2| Mus musculus BAC clone RP23-392P5 from chromosome 14, complete sequence
          Length = 207510

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1250   aagggatatgggaggagatttgtga 1274
              ||||||||||| |||||||||||||
Sbjct: 201800 aagggatatggaaggagatttgtga 201824
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>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
            complete sequence
          Length = 173074

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 82   ggaggaggcggcggcgaaggaggaa 106
            |||||||||||||||| ||||||||
Sbjct: 4919 ggaggaggcggcggcggaggaggaa 4895
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>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05,
             complete sequence
          Length = 107407

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 82    ggaggaggcggcggcgaaggaggaa 106
             |||||||||||||||| ||||||||
Sbjct: 66764 ggaggaggcggcggcggaggaggaa 66740
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>gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, complete sequence
          Length = 151577

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1147  gcagaactatggttgtctagt 1167
             |||||||||||||||||||||
Sbjct: 37297 gcagaactatggttgtctagt 37317
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>gb|AY810594.1| Schistosoma japonicum SJCHGC05235 protein mRNA, partial cds
          Length = 760

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1645 tctgcatcatcatcagagata 1665
            |||||||||||||||||||||
Sbjct: 31   tctgcatcatcatcagagata 11
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>gb|AC092908.9| Homo sapiens 3q BAC RP11-757I12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 174257

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1251  agggatatgggaggagatttg 1271
             |||||||||||||||||||||
Sbjct: 41181 agggatatgggaggagatttg 41161
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>gb|AE005685.1| Caulobacter crescentus CB15 section 11 of 359 of the complete
           genome
          Length = 10290

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 156 cgacgacgcccaggacggcttcttc 180
           |||||||| ||||||||||||||||
Sbjct: 122 cgacgacggccaggacggcttcttc 98
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>emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 in linkage group 9,
             complete sequence
          Length = 210207

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1988  gcaaaaggaaatgacatgttt 2008
             |||||||||||||||||||||
Sbjct: 23682 gcaaaaggaaatgacatgttt 23662
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 81     cggaggaggcggcggcgaaggagga 105
              ||||||||||||||||| |||||||
Sbjct: 403318 cggaggaggcggcggcggaggagga 403294
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 81       cggaggaggcggcggcgaaggagga 105
                |||||||||| ||||||||||||||
Sbjct: 20223299 cggaggaggcagcggcgaaggagga 20223323
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>emb|AL356288.15| Human DNA sequence from clone RP11-6E3 on chromosome 1, complete sequence
          Length = 184469

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1990   aaaaggaaatgacatgtttca 2010
              |||||||||||||||||||||
Sbjct: 140386 aaaaggaaatgacatgtttca 140366
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>emb|AL135923.15| Human DNA sequence from clone RP11-29B9 on chromosome 9p23-24.3 Contains
              two novel genes, complete sequence
          Length = 152470

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1036   cttccttctgttaatttctat 1056
              |||||||||||||||||||||
Sbjct: 140248 cttccttctgttaatttctat 140268
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 608     aggtgctcgtagaggacgaggccgcgcag 636
               |||||||||||| || |||||||||||||
Sbjct: 2130462 aggtgctcgtagcgggcgaggccgcgcag 2130490
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 52      gacggcggcggcgcctccccg 72
               |||||||||||||||||||||
Sbjct: 2190820 gacggcggcggcgcctccccg 2190840
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>gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosome 14, complete sequence
          Length = 210115

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1250   aagggatatgggaggagatttgtga 1274
              ||||||||||| |||||||||||||
Sbjct: 161702 aagggatatggaaggagatttgtga 161678
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>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0414D03
          Length = 169823

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 81     cggaggaggcggcggcgaaggagga 105
              ||||||||||||||||| |||||||
Sbjct: 151917 cggaggaggcggcggcggaggagga 151893
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>dbj|AP005909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0006G10
          Length = 156293

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 81    cggaggaggcggcggcgaaggagga 105
             ||||||||||||||||| |||||||
Sbjct: 27678 cggaggaggcggcggcggaggagga 27654
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>dbj|AK071092.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079K08, full
           insert sequence
          Length = 1463

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 81  cggaggaggcggcggcgaaggagga 105
           ||||||||||||||||| |||||||
Sbjct: 344 cggaggaggcggcggcggaggagga 320
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>dbj|AK066648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071E21, full
           insert sequence
          Length = 1762

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 82  ggaggaggcggcggcgaaggaggaa 106
           |||||||||||||||| ||||||||
Sbjct: 46  ggaggaggcggcggcggaggaggaa 22
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>gb|AC154667.2| Mus musculus BAC clone RP23-153F8 from 16, complete sequence
          Length = 195017

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 477   gatcctgcaacagcagctggaagtg 501
             |||| ||||||||||||||||||||
Sbjct: 57201 gatcatgcaacagcagctggaagtg 57225
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>emb|AL953877.5| Zebrafish DNA sequence from clone CH211-188M3, complete sequence
          Length = 152080

 Score = 42.1 bits (21), Expect = 7.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1988  gcaaaaggaaatgacatgttt 2008
             |||||||||||||||||||||
Sbjct: 25602 gcaaaaggaaatgacatgttt 25622


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 343,450,512
Number of extensions: 18790992
Number of successful extensions: 103125
Number of sequences better than 10.0: 43
Number of HSP's gapped: 103116
Number of HSP's successfully gapped: 60
Length of query: 2066
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2043
Effective length of database: 18,503,978,556
Effective search space: 37803628189908
Effective search space used: 37803628189908
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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