ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf71o13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_001227684.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_09758) mRNA, complete cds Length = 1608 Score = 176 bits (89), Expect = 2e-40 Identities = 158/181 (87%) Strand = Plus / Plus Query: 1262 catgatccgcggcggccacgtcgacgtctccatccttggcgccctccaagtcggcgccaa 1321 ||||||||||||||| ||||||||||| |||||||| |||||||| || ||| ||||| Sbjct: 1212 catgatccgcggcgggcacgtcgacgtgtccatcctgggcgccctgcaggtcagcgccgc 1271 Query: 1322 cggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccat 1381 ||| || || |||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1272 cggcgacctggccaactacatgatccccggcaaggtgttcaagggcatgggcggcgccat 1331 Query: 1382 ggacctggtctccaacccggacgagaccaagatcgtcgtcacgaccgaccacgtcgacaa 1441 ||| || || || ||||||||| | ||||||||||||||| | ||||| ||||||| ||| Sbjct: 1332 ggatcttgtatcgaacccggacaacaccaagatcgtcgtcgcaaccgagcacgtcgccaa 1391 Query: 1442 g 1442 | Sbjct: 1392 g 1392 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Plus Query: 330 ggacccgaagaccttcactcgctcactgtcgtctccaacaa 370 ||||||||| ||||||||||||||||| ||| |||||||| Sbjct: 358 ggacccgaatcccttcactcgctcactgccgtgtccaacaa 398 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1185 gacatcattaacgccggcaaagagacc 1211 |||||||| |||||||||||||||||| Sbjct: 1135 gacatcatcaacgccggcaaagagacc 1161
>ref|XM_568119.1| Cryptococcus neoformans var. neoformans JEC21 Succinyl-CoA:3-ketoacid-coenzyme A transferase (CNL05860) partial mRNA Length = 1934 Score = 176 bits (89), Expect = 2e-40 Identities = 263/321 (81%) Strand = Plus / Plus Query: 1097 cttgcctgagggcaggaaggtctggatccagagcgaaaacggcatcctcggcatgggcgc 1156 ||||||||| || | ||| |||||| ||||||| || ||||| ||| | || |||||| | Sbjct: 1208 cttgcctgatggtatgaaagtctgggtccagagtgagaacggtatcttgggtatgggccc 1267 Query: 1157 ttacccaaccgaagaggaagtcgacatcgacatcattaacgccggcaaagagaccgtcac 1216 |||||||||| ||||||| || ||| ||||||||| |||||||| ||||| ||||| || Sbjct: 1268 ttacccaaccaaagaggaggtggacgccgacatcatcaacgccggtaaagaaaccgtaac 1327 Query: 1217 cctcgttcccggcgccagtgtcttcgacagctccgaaagcttcgccatgatccgcggcgg 1276 ||||||||| || || || ||||| |||||| ||||| |||||||| || || Sbjct: 1328 cctcgttcctggtgcttccgtattcgattcctccgagtccttcggtatgatccgaggtgg 1387 Query: 1277 ccacgtcgacgtctccatccttggcgccctccaagtcggcgccaacggtgatctcgccaa 1336 ||||||||||| |||||||| || ||| | |||| |||||||||||||||||||| Sbjct: 1388 tcacgtcgacgtatccatcctcggtgccatggaagtttctgccaacggtgatctcgccaa 1447 Query: 1337 ctacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggtctccaa 1396 |||||||| ||||||||| || |||| || |||||||||||||||||||| |||||||| Sbjct: 1448 ttacatgattcccggcaagctcgtcaagggtatgggcggcgccatggacctagtctccaa 1507 Query: 1397 cccggacgagaccaagatcgt 1417 || ||||||||||||||||| Sbjct: 1508 tcctgacgagaccaagatcgt 1528
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 139 bits (70), Expect = 4e-29 Identities = 193/234 (82%) Strand = Plus / Plus Query: 1184 cgacatcattaacgccggcaaagagaccgtcaccctcgttcccggcgccagtgtcttcga 1243 ||||||||| |||||||| ||||| ||||| ||||||||||| || || || ||||| Sbjct: 629208 cgacatcatcaacgccggtaaagaaaccgtaaccctcgttcctggtgcttccgtattcga 629267 Query: 1244 cagctccgaaagcttcgccatgatccgcggcggccacgtcgacgtctccatccttggcgc 1303 |||||| ||||| |||||||| || || ||||||||||| |||||||| || || Sbjct: 629268 ttcctccgagtccttcggtatgatccgaggtggtcacgtcgacgtatccatcctcggtgc 629327 Query: 1304 cctccaagtcggcgccaacggtgatctcgccaactacatgatccccggcaaggtcttcaa 1363 | | |||| |||||||||||||||||||| |||||||| ||||||||| || |||| Sbjct: 629328 catggaagtttctgccaacggtgatctcgccaattacatgattcccggcaagctcgtcaa 629387 Query: 1364 aggcatgggcggcgccatggacctggtctccaacccggacgagaccaagatcgt 1417 || |||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 629388 gggtatgggcggcgccatggacctagtctccaatcctgacgagaccaagatcgt 629441 Score = 52.0 bits (26), Expect = 0.007 Identities = 65/78 (83%) Strand = Plus / Plus Query: 1097 cttgcctgagggcaggaaggtctggatccagagcgaaaacggcatcctcggcatgggcgc 1156 ||||||||| || | ||| |||||| ||||||| || ||||| ||| | || |||||| | Sbjct: 629064 cttgcctgatggtatgaaagtctgggtccagagtgagaacggtatcttgggtatgggccc 629123 Query: 1157 ttacccaaccgaagagga 1174 |||||||||| ||||||| Sbjct: 629124 ttacccaaccaaagagga 629141
>ref|XM_954463.1| Neurospora crassa OR74A hypothetical protein (NCU08145.1) partial mRNA Length = 1674 Score = 119 bits (60), Expect = 4e-23 Identities = 183/224 (81%) Strand = Plus / Plus Query: 1194 aacgccggcaaagagaccgtcaccctcgttcccggcgccagtgtcttcgacagctccgaa 1253 |||||||||||||| | ||||||||||| ||||||||| ||| ||||| |||||| Sbjct: 1210 aacgccggcaaagaaagtgtcaccctcgtccccggcgccgccacctttgacagttccgaa 1269 Query: 1254 agcttcgccatgatccgcggcggccacgtcgacgtctccatccttggcgccctccaagtc 1313 |||| |||||||||| || |||||||||||||| |||||||| || || || || ||| Sbjct: 1270 tccttctccatgatccggggaggccacgtcgacgtttccatcctcggagcgctacaggtc 1329 Query: 1314 ggcgccaacggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggc 1373 |||| |||||| || || ||||||||||||||||| ||| | ||||| || |||||| Sbjct: 1330 agcgcggccggtgaccttgcaaactacatgatccccggaaagatgttcaagggaatgggc 1389 Query: 1374 ggcgccatggacctggtctccaacccggacgagaccaagatcgt 1417 || || ||||||||||| || || |||||| | ||||||||||| Sbjct: 1390 ggtgctatggacctggtgtctaatccggacaacaccaagatcgt 1433
>ref|XM_001212037.1| Aspergillus terreus NIH2624 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (ATEG_02859) mRNA, complete cds Length = 1548 Score = 97.6 bits (49), Expect = 1e-16 Identities = 127/153 (83%) Strand = Plus / Plus Query: 1262 catgatccgcggcggccacgtcgacgtctccatccttggcgccctccaagtcggcgccaa 1321 |||||||||||| || |||||||| || || || || || ||||| ||||| ||||||| Sbjct: 1251 catgatccgcggtggacacgtcgatgtgtcgattctgggggccctgcaagtgagcgccaa 1310 Query: 1322 cggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccat 1381 || |||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 1311 aggcgatctcgcgaactacatgattcccggcaaggtgttcaaggggatgggcggtgccat 1370 Query: 1382 ggacctggtctccaacccggacgagaccaagat 1414 |||| || | || ||||| ||| |||| ||||| Sbjct: 1371 ggacttgatttcgaaccccgaccagacgaagat 1403 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1496 ctgcgtcagcaccatcatcaccgacct 1522 ||||||||||||||||||||| ||||| Sbjct: 1485 ctgcgtcagcaccatcatcacagacct 1511
>ref|XM_382322.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02146.1) partial mRNA Length = 1572 Score = 85.7 bits (43), Expect = 5e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 1278 cacgtcgacgtctccatccttggcgccctccaagtcggcgccaacggtgatctcgccaac 1337 |||||||| || || |||||||| ||||| |||||| |||| |||||| | |||||| Sbjct: 1192 cacgtcgatgtgtcaatccttggtgccctgcaagtcagcgcagttggtgatttggccaac 1251 Query: 1338 tacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggtctccaac 1397 |||||||| || |||||||| ||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 1252 tacatgattcctggcaaggtgttcaagggcatgggcggagcgatggatctggtagccaac 1311 Query: 1398 ccggacgagaccaagatcgtcgt 1420 || ||| | |||||||| ||||| Sbjct: 1312 cccgacaacaccaagattgtcgt 1334 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 798 atggccaaggccgccaaagtcaccatcatcgaagccgagaacattgtc 845 |||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 715 atggccaaggccgcaaagctcaccatcgtcgaagccgagaacattgtc 762
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 77.8 bits (39), Expect = 1e-10 Identities = 108/131 (82%) Strand = Plus / Minus Query: 1257 ttcgccatgatccgcggcggccacgtcgacgtctccatccttggcgccctccaagtcggc 1316 |||| ||||||||||||||| |||||| | ||| ||||||| |||||| | || ||| | Sbjct: 521171 ttcggcatgatccgcggcgggcacgtcaaggtcgccatcctgggcgccatgcaggtctcc 521112 Query: 1317 gccaacggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggc 1376 | || ||| || |||||||||| | |||||||||||| | |||| |||||||||||| Sbjct: 521111 ggcagcggcgacctcgccaactggaccatccccggcaagatggtcaagggcatgggcggc 521052 Query: 1377 gccatggacct 1387 ||||||||||| Sbjct: 521051 gccatggacct 521041 Score = 61.9 bits (31), Expect = 7e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1332 gccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||| |||||||| |||||| | |||| |||||||||||||||||||||||||| Sbjct: 1549767 gccaactggatgatcccgggcaagatggtcaagggcatgggcggcgccatggacctggt 1549825
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 77.8 bits (39), Expect = 1e-10 Identities = 99/119 (83%) Strand = Plus / Plus Query: 1269 cgcggcggccacgtcgacgtctccatccttggcgccctccaagtcggcgccaacggtgat 1328 |||||||||||| ||||| | || ||||| |||||| | || |||| | ||||| ||| Sbjct: 1648990 cgcggcggccacatcgacctgtcgatcctcggcgccatgcaggtcgcccagaacggcgat 1649049 Query: 1329 ctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacct 1387 |||||||||| ||||||||||||||| | |||| |||||||||||||| |||||||| Sbjct: 1649050 ctcgccaactggatgatccccggcaagatggtcaagggcatgggcggcgcgatggacct 1649108 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1125 cagagcgaaaacggcatcctcggcatgggc 1154 |||||||| |||||||| |||||||||||| Sbjct: 1648846 cagagcgagaacggcatgctcggcatgggc 1648875
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 1320 aacggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgcc 1379 ||||| ||||||||||||| ||||||||||||||| | ||||||||||||||||||| Sbjct: 1406993 aacggcgatctcgccaactggatgatccccggcaagatggtcaaaggcatgggcggcgcg 1407052 Query: 1380 atgga 1384 ||||| Sbjct: 1407053 atgga 1407057
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 1326 gatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggac 1385 ||||| ||||||| ||||||||||||||| | |||| ||||||||||||||||||||| Sbjct: 3293350 gatctggccaactggatgatccccggcaagctggtcaagggcatgggcggcgccatggac 3293409 Query: 1386 ctggt 1390 ||||| Sbjct: 3293410 ctggt 3293414
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 71.9 bits (36), Expect = 8e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 1320 aacggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgcc 1379 ||||| || |||||||||| ||||||||||||||| | |||| |||||||||||||| Sbjct: 4570280 aacggcgacctcgccaactggatgatccccggcaagatggtcaagggcatgggcggcgcg 4570221 Query: 1380 atggacctggtc 1391 |||||||||||| Sbjct: 4570220 atggacctggtc 4570209 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1125 cagagcgaaaacggcatcctcggcatgggc 1154 |||||||| |||||||| |||||||||||| Sbjct: 4570475 cagagcgagaacggcatgctcggcatgggc 4570446
>ref|XM_001212972.1| Aspergillus terreus NIH2624 succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial precursor (ATEG_03794) mRNA, complete cds Length = 2499 Score = 71.9 bits (36), Expect = 8e-09 Identities = 95/114 (83%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 1329 ctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctg 1388 |||||||||| |||| ||||||| |||||| || ||| | |||||||||||||||||| Sbjct: 1207 ctcgccaacttcatgctccccggtaaggtc---aagggcgtcggcggcgccatggacctg 1263 Query: 1389 gtctccaacccggacgagaccaagatcgtcgtcacgaccgaccacgtcgacaag 1442 ||| ||||||| || |||||||| ||||||| || | || |||||||||||| Sbjct: 1264 gtcgccaaccccgagaagaccaaggtcgtcgtgaccatggagcacgtcgacaag 1317
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 69.9 bits (35), Expect = 3e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 1329 ctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctg 1388 |||||||||| ||||||||||||||| | |||| |||||||||||||| ||||||||| Sbjct: 1601327 ctcgccaactggatgatccccggcaagatggtcaagggcatgggcggcgcgatggacctg 1601386 Query: 1389 gtc 1391 ||| Sbjct: 1601387 gtc 1601389
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||| | |||| |||||||||||||||||||||||||| Sbjct: 3447580 atgatccccggcaagctggtcaagggcatgggcggcgccatggacctggt 3447531 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Minus Query: 1256 cttcgccatgatccgcggcggccacgtcgac 1286 ||||||||||||||| ||||||||||||||| Sbjct: 3447665 cttcgccatgatccgtggcggccacgtcgac 3447635 Score = 48.1 bits (24), Expect = 0.11 Identities = 66/80 (82%) Strand = Plus / Minus Query: 1134 aacggcatcctcggcatgggcgcttacccaaccgaagaggaagtcgacatcgacatcatt 1193 |||||| | |||||||||||||| | ||| | ||| | |||||||||| |||||| || Sbjct: 3447787 aacggcctgctcggcatgggcgcgttccccagcgaggcggaagtcgacgccgacatgatc 3447728 Query: 1194 aacgccggcaaagagaccgt 1213 ||||||||||| ||||||| Sbjct: 3447727 aacgccggcaagcagaccgt 3447708 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1369 tgggcggcgccatggacctggtctc 1393 ||||||||||||| ||||||||||| Sbjct: 3654158 tgggcggcgccatcgacctggtctc 3654134
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||| | |||| |||||||||||||||||||||||||| Sbjct: 2186608 atgatccccggcaagctggtcaagggcatgggcggcgccatggacctggt 2186657 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 1256 cttcgccatgatccgcggcggccacgtcgac 1286 ||||||||||||||| ||||||||||||||| Sbjct: 2186523 cttcgccatgatccgtggcggccacgtcgac 2186553 Score = 48.1 bits (24), Expect = 0.11 Identities = 66/80 (82%) Strand = Plus / Plus Query: 1134 aacggcatcctcggcatgggcgcttacccaaccgaagaggaagtcgacatcgacatcatt 1193 |||||| | |||||||||||||| | ||| | ||| | |||||||||| |||||| || Sbjct: 2186401 aacggcctgctcggcatgggcgcgttccccagcgaggcggaagtcgacgccgacatgatc 2186460 Query: 1194 aacgccggcaaagagaccgt 1213 ||||||||||| ||||||| Sbjct: 2186461 aacgccggcaagcagaccgt 2186480 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1369 tgggcggcgccatggacctggtctc 1393 ||||||||||||| ||||||||||| Sbjct: 1980520 tgggcggcgccatcgacctggtctc 1980544
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 67.9 bits (34), Expect = 1e-07 Identities = 37/38 (97%) Strand = Plus / Minus Query: 1047 ggcttctacgtcaaccttggtatcggcatgcccaccct 1084 ||||||||||||||||| |||||||||||||||||||| Sbjct: 4554993 ggcttctacgtcaacctgggtatcggcatgcccaccct 4554956 Score = 60.0 bits (30), Expect = 3e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 1332 gccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctgg 1389 ||||||| ||||||||||| ||| | |||| ||||||||||||||||||||||||| Sbjct: 4554708 gccaactggatgatccccggaaagatgatcaagggcatgggcggcgccatggacctgg 4554651
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1330 tcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctgg 1389 ||||||||| ||||||||||||||| | |||| |||||||||||||| |||||||||| Sbjct: 2230600 tcgccaactggatgatccccggcaagatgatcaagggcatgggcggcgcgatggacctgg 2230659 Query: 1390 tc 1391 || Sbjct: 2230660 tc 2230661
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||| | |||| |||||||||||||||||||||||||| Sbjct: 2565447 atgatccccggcaagttggtcaagggcatgggcggcgccatggacctggt 2565496 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 1256 cttcgccatgatccgcggcggccacgtcgac 1286 |||||| |||||||||||||||||||||||| Sbjct: 2565362 cttcgcgatgatccgcggcggccacgtcgac 2565392 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1047 ggcttctacgtcaaccttggtatcggcatgcccaccct 1084 |||| |||||||||||| ||||||||||| |||||||| Sbjct: 2565153 ggctactacgtcaacctcggtatcggcatccccaccct 2565190
>gb|AY657529.1| Synthetic construct Peudomonas aeruginosa clone FLH040590.01F PA2000 gene, partial cds Length = 657 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||| | |||| |||||||||||||||||||||||||| Sbjct: 349 atgatccccggcaagctggtcaagggcatgggcggcgccatggacctggt 398 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 1256 cttcgccatgatccgcggcggccacgtcgac 1286 ||||||||||||||| ||||||||||||||| Sbjct: 264 cttcgccatgatccgtggcggccacgtcgac 294 Score = 48.1 bits (24), Expect = 0.11 Identities = 66/80 (82%) Strand = Plus / Plus Query: 1134 aacggcatcctcggcatgggcgcttacccaaccgaagaggaagtcgacatcgacatcatt 1193 |||||| | |||||||||||||| | ||| | ||| | |||||||||| |||||| || Sbjct: 142 aacggcctgctcggcatgggcgcgttccccagcgaggcggaagtcgacgccgacatgatc 201 Query: 1194 aacgccggcaaagagaccgt 1213 ||||||||||| ||||||| Sbjct: 202 aacgccggcaagcagaccgt 221
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||| | ||||||||||||||||||| ||||||||||| Sbjct: 3660660 atgatccccggcaagctggtcaaaggcatgggcggcgcgatggacctggt 3660709 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1256 cttcgccatgatccgcggcgg 1276 ||||||||||||||||||||| Sbjct: 3660575 cttcgccatgatccgcggcgg 3660595
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 1330 tcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctgg 1389 ||||||||| ||||||||||||||| | |||| |||||||||||||| |||||||||| Sbjct: 2873208 tcgccaactggatgatccccggcaagatgatcaagggcatgggcggcgcgatggacctgg 2873149 Query: 1390 tc 1391 || Sbjct: 2873148 tc 2873147 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1254 agcttcgccatgatccgcggcggcca 1279 ||||||| |||||||||||||||||| Sbjct: 2873284 agcttcggcatgatccgcggcggcca 2873259 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1470 tgcacgctgccgctgaccggc 1490 ||||||||||||||||||||| Sbjct: 2873074 tgcacgctgccgctgaccggc 2873054
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Minus Query: 1320 aacggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgcc 1379 ||||| || |||||||||| ||||||||||||||| | |||| |||||||||||||| Sbjct: 4400431 aacggcgacctcgccaactggatgatccccggcaagatggtcaagggcatgggcggcgcg 4400372 Query: 1380 atggacctggtc 1391 ||||| |||||| Sbjct: 4400371 atggatctggtc 4400360 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1125 cagagcgaaaacggcatcctcggcatggg 1153 |||||||| |||||||| ||||||||||| Sbjct: 4400626 cagagcgagaacggcatgctcggcatggg 4400598 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1039 tcaaagaaggcttctacgtca 1059 ||||||||||||||||||||| Sbjct: 5270433 tcaaagaaggcttctacgtca 5270413
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 1131 gaaaacggcatcctcggcatgggcgcttacccaaccgaagaggaagtcgacatcgacatc 1190 ||||||||| |||| ||||||||||| | ||| ||||| || ||||||||| |||||| Sbjct: 2588093 gaaaacggcctcctgggcatgggcgccttccccaccgaggacgaagtcgacgccgacatg 2588034 Query: 1191 attaacgccggcaaagagac 1210 || |||||||||||| |||| Sbjct: 2588033 atcaacgccggcaaacagac 2588014 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||| | |||| |||||||||||||||||||| ||||| Sbjct: 2587883 atgatccccggcaagctggtcaagggcatgggcggcgccatggatctggt 2587834 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1047 ggcttctacgtcaaccttggtatcggcatgcccaccct 1084 |||||||||||||||||||| |||||||| || ||||| Sbjct: 2588177 ggcttctacgtcaaccttggcatcggcatcccgaccct 2588140
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 61.9 bits (31), Expect = 7e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 1256 cttcgccatgatccgcggcggccacgtcgac 1286 ||||||||||||||||||||||||||||||| Sbjct: 2361007 cttcgccatgatccgcggcggccacgtcgac 2360977 Score = 46.1 bits (23), Expect = 0.44 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1360 tcaaaggcatgggcggcgccatggacctggt 1390 |||| |||||||||||||| ||||||||||| Sbjct: 2360903 tcaagggcatgggcggcgcgatggacctggt 2360873
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 61.9 bits (31), Expect = 7e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 1256 cttcgccatgatccgcggcggccacgtcgacgtctccatccttggcgccctccaagtcgg 1315 |||||| |||||||||||||||||| || || | ||||||| ||||| | || ||| | Sbjct: 1355583 cttcgcgatgatccgcggcggccacatcaacctggccatcctcggcgcgatgcaggtcag 1355642 Query: 1316 cgccaacggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcgg 1375 || || || || |||||||||| |||||||| |||||| | |||| ||||||||||| Sbjct: 1355643 cgaaaagggcgacctcgccaactggatgatcccgggcaagatggtcaagggcatgggcgg 1355702 Query: 1376 cgccatggacctggt 1390 ||| ||||| ||||| Sbjct: 1355703 cgcgatggatctggt 1355717 Score = 46.1 bits (23), Expect = 0.44 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1131 gaaaacggcatcctcggcatgggcgcttacccaaccgaagaggaagtcgacatcgacatc 1190 ||||||||| | |||||||| ||| | | ||| ||||| || ||||||||| |||||| Sbjct: 1355458 gaaaacggcctgctcggcatcggcccgttcccgaccgaggacgaagtcgacgccgacatg 1355517 Query: 1191 attaacgccggcaaagagaccgt 1213 || ||||||||||| ||||||| Sbjct: 1355518 atcaacgccggcaagcagaccgt 1355540
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 61.9 bits (31), Expect = 7e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 1256 cttcgccatgatccgcggcggccacgtcgacgtctccatccttggcgccctccaagtcgg 1315 |||||||||||||||||||||||| |||| | | ||||| ||||| | || ||| | Sbjct: 2787533 cttcgccatgatccgcggcggccatatcgatctggcgatcctcggcgcgatgcaggtcag 2787592 Query: 1316 cgccaacggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcgg 1375 || |||| || |||||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 2787593 cgagcacggcgacctcgccaactggatgatcccgggcaagctggtcaaaggcatgggcgg 2787652 Query: 1376 cgccatggacctggt 1390 || ||||||||||| Sbjct: 2787653 ggcgatggacctggt 2787667
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 61.9 bits (31), Expect = 7e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 1332 gccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||| ||||| ||||||||| | |||| |||||||||||||||||||||||||| Sbjct: 27782 gccaactggatgattcccggcaagatggtcaagggcatgggcggcgccatggacctggt 27724 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1257 ttcgccatgatccgcggcggccacgtcgac 1286 ||||||||||| |||||||||||| ||||| Sbjct: 76988 ttcgccatgatgcgcggcggccacctcgac 76959 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1369 tgggcggcgccatggacctgg 1389 ||||||||||||||||||||| Sbjct: 76873 tgggcggcgccatggacctgg 76853
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 61.9 bits (31), Expect = 7e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 1332 gccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||| ||||| ||||||||| | |||| |||||||||||||||||||||||||| Sbjct: 31489 gccaactggatgattcccggcaagatggtcaagggcatgggcggcgccatggacctggt 31431 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1257 ttcgccatgatccgcggcggccacgtcgac 1286 ||||||||||| |||||||||||| ||||| Sbjct: 80941 ttcgccatgatgcgcggcggccacctcgac 80912 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1369 tgggcggcgccatggacctgg 1389 ||||||||||||||||||||| Sbjct: 80826 tgggcggcgccatggacctgg 80806
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 61.9 bits (31), Expect = 7e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggtc 1391 ||||||||||||||| | |||| |||||||| |||||||||||||||||| Sbjct: 2437916 atgatccccggcaagctggtcaagggcatgggtggcgccatggacctggtc 2437866 Score = 42.1 bits (21), Expect = 6.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1053 tacgtcaaccttggtatcggcatgcccaccctc 1085 ||||||||||| || ||||||||||| |||||| Sbjct: 2438204 tacgtcaacctcggcatcggcatgccgaccctc 2438172
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 60.0 bits (30), Expect = 3e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 1326 gatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggac 1385 ||||| ||||||| |||||||| |||||| | ||||||||||||||||||| ||||| Sbjct: 3407450 gatctggccaactggatgatcccgggcaagatgatcaaaggcatgggcggcgcgatggat 3407391 Query: 1386 ctggtc 1391 |||||| Sbjct: 3407390 ctggtc 3407385
>ref|XM_753721.1| Ustilago maydis 521 hypothetical protein (UM02667.1) partial mRNA Length = 1584 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 1263 atgatccgcggcggccacgtcgacgtctccatccttggcgccctccaagtcggcgccaac 1322 ||||||||||| || ||| || |||| |||| || || || ||||| || || |||||| Sbjct: 1192 atgatccgcggtggacacatcaacgtgaccatgctcggtgcgctccaggtgggagccaac 1251 Query: 1323 ggtgatctcgccaactacatgatccc 1348 |||||||| ||||||||||||||||| Sbjct: 1252 ggtgatctggccaactacatgatccc 1277 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1508 catcatcaccgacctctgcgtcttc 1532 |||| |||||||||||||||||||| Sbjct: 1437 catcgtcaccgacctctgcgtcttc 1461
>gb|AE005910.1| Caulobacter crescentus CB15 section 236 of 359 of the complete genome Length = 13852 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1237 tcttcgacagctccgaaagcttcgccatgatccgcggcggccacgtcgac 1286 ||||||||||| || | ||||||||||||||||| ||||||||| ||||| Sbjct: 3290 tcttcgacagcgcccagagcttcgccatgatccggggcggccacatcgac 3339 Score = 58.0 bits (29), Expect = 1e-04 Identities = 29/29 (100%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||||||||||||||||| Sbjct: 3415 aaaggcatgggcggcgccatggacctggt 3443 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1510 tcatcaccgacctctgcgtcttc 1532 ||||||||||||||||||||||| Sbjct: 3557 tcatcaccgacctctgcgtcttc 3579 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1047 ggcttctacgtcaaccttggtatcggcatgcccaccct 1084 ||||||||||||||||| || |||||||| || ||||| Sbjct: 3100 ggcttctacgtcaacctcggcatcggcatcccgaccct 3137
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||| | |||| |||||||||||||| ||||||||||| Sbjct: 3898705 atgatccccggcaagttgatcaagggcatgggcggcgcaatggacctggt 3898754
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1257 ttcgccatgatccgcggcggccacgtcgacgtc 1289 ||||| ||||||||||||||||||||||||||| Sbjct: 1978569 ttcgcgatgatccgcggcggccacgtcgacgtc 1978601
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1257 ttcgccatgatccgcggcggccacgtcgacgtc 1289 ||||| ||||||||||||||||||||||||||| Sbjct: 1483949 ttcgcgatgatccgcggcggccacgtcgacgtc 1483981
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Minus Query: 1322 cggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccat 1381 |||||| || ||||||| ||||||||||||||| | |||| |||||||||||||| || Sbjct: 2814277 cggtgacctagccaactggatgatccccggcaagatggtcaagggcatgggcggcgcgat 2814218 Query: 1382 ggacctggt 1390 ||| ||||| Sbjct: 2814217 ggatctggt 2814209 Score = 50.1 bits (25), Expect = 0.028 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1056 gtcaaccttggtatcggcatgcccaccct 1084 ||||||||||| ||||||||||||||||| Sbjct: 2814543 gtcaaccttggcatcggcatgcccaccct 2814515
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 501 gaactcactccccaaggtaccattgctgaaaag 533 |||||||||||||| |||||||||||||||||| Sbjct: 2558247 gaactcactccccagggtaccattgctgaaaag 2558279
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Minus Query: 1322 cggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccat 1381 |||||| || ||||||| ||||||||||||||| | |||| |||||||||||||| || Sbjct: 45753 cggtgacctagccaactggatgatccccggcaagatggtcaagggcatgggcggcgcgat 45694 Query: 1382 ggacctggt 1390 ||| ||||| Sbjct: 45693 ggatctggt 45685 Score = 50.1 bits (25), Expect = 0.028 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1056 gtcaaccttggtatcggcatgcccaccct 1084 ||||||||||| ||||||||||||||||| Sbjct: 46019 gtcaaccttggcatcggcatgcccaccct 45991
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Minus Query: 1322 cggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccat 1381 |||||| || ||||||| ||||||||||||||| | |||| |||||||||||||| || Sbjct: 274586 cggtgacctagccaactggatgatccccggcaagatggtcaagggcatgggcggcgcgat 274527 Query: 1382 ggacctggt 1390 ||| ||||| Sbjct: 274526 ggatctggt 274518 Score = 50.1 bits (25), Expect = 0.028 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1056 gtcaaccttggtatcggcatgcccaccct 1084 ||||||||||| ||||||||||||||||| Sbjct: 274852 gtcaaccttggcatcggcatgcccaccct 274824
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Minus Query: 1320 aacggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgcc 1379 ||||| ||||| ||||||| ||||||||||||||| | |||| |||||||||||||| Sbjct: 7808931 aacggcgatcttgccaactggatgatccccggcaagatggtcaagggcatgggcggcgcg 7808872 Query: 1380 atgga 1384 ||||| Sbjct: 7808871 atgga 7808867 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1123 tccagagcgaaaacggcatcctcggcatgggc 1154 |||||||||| |||||||| |||||||||||| Sbjct: 7809128 tccagagcgagaacggcatgctcggcatgggc 7809097 Score = 44.1 bits (22), Expect = 1.7 Identities = 73/90 (81%) Strand = Plus / Minus Query: 1266 atccgcggcggccacgtcgacgtctccatccttggcgccctccaagtcggcgccaacggt 1325 |||||||||||||| ||||||||| | |||| |||| ||| ||||||| || || Sbjct: 3832084 atccgcggcggccatgtcgacgtcagcgtcctcggcggcctgcaagtcgatgcgctgggc 3832025 Query: 1326 gatctcgccaactacatgatccccggcaag 1355 |||||||||||| ||||||||||||||| Sbjct: 3832024 catctcgccaactggatgatccccggcaag 3831995
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 56.0 bits (28), Expect = 5e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 1256 cttcgccatgatccgcggcggccacgtcgacgtctccatccttggcgc 1303 |||||| |||||||||||||||||| ||||| | |||||||| ||||| Sbjct: 4909104 cttcgcgatgatccgcggcggccacatcgacctgtccatcctgggcgc 4909057
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 56.0 bits (28), Expect = 5e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1332 gccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggtc 1391 ||||||| |||||||| |||||| | |||| |||||||||||||| |||||||||||| Sbjct: 1446942 gccaactggatgatcccgggcaagatggtcaagggcatgggcggcgcgatggacctggtc 1447001
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 56.0 bits (28), Expect = 5e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1332 gccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggtc 1391 ||||||| |||||||| |||||| | |||| |||||||||||||| |||||||||||| Sbjct: 1687295 gccaactggatgatcccgggcaagatggtcaagggcatgggcggcgcgatggacctggtc 1687354
>ref|XM_743630.1| Aspergillus fumigatus Af293 coenzyme A transferase (Afu3g04030) partial mRNA Length = 1581 Score = 56.0 bits (28), Expect = 5e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 1302 gccctccaagtcggcgccaacggtgatctcgccaactacatgatccccggcaaggtcttc 1361 ||||| ||||| ||||||| || || || || ||||||||||| ||||| ||||||||| Sbjct: 1354 gccctgcaagtgagcgccaaaggcgacctagcgaactacatgattcccggaaaggtcttc 1413 Query: 1362 aaaggcatgggcggcgccatggacctggtctccaacccggacgagaccaagatcgt 1417 || || ||||| || || |||||| || |||| || || ||| | ||||||||||| Sbjct: 1414 aagggaatgggaggagctatggacttgatctctaatccagaccaaaccaagatcgt 1469
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 56.0 bits (28), Expect = 5e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1256 cttcgccatgatccgcggcggccacgtcgacgtctccatccttggcgc 1303 |||||| |||||||||||||||||| ||||| | |||||||| ||||| Sbjct: 4324158 cttcgcgatgatccgcggcggccacatcgacctgtccatcctgggcgc 4324205
>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome Length = 3705021 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Minus Query: 1329 ctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacct 1387 |||||||||| ||||||||||||||| || | || ||||||||||| || |||||||| Sbjct: 3052817 ctcgccaactggatgatccccggcaagctcgtgaagggcatgggcggggcgatggacct 3052759
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 1360 tcaaaggcatgggcggcgccatggacctggt 1390 |||| |||||||||||||||||||||||||| Sbjct: 1966681 tcaagggcatgggcggcgccatggacctggt 1966711
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1326 gatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatgga 1384 ||||||||||||| ||||||||||||||| | |||| || ||||||||||| ||||| Sbjct: 1107489 gatctcgccaactggatgatccccggcaagatggtcaagggaatgggcggcgcgatgga 1107547 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1470 tgcacgctgccgctgaccggcg 1491 |||||||||||||||||||||| Sbjct: 1107624 tgcacgctgccgctgaccggcg 1107645 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1125 cagagcgaaaacggcatcctcggcatggg 1153 |||||||| |||||||| ||||||||||| Sbjct: 1107288 cagagcgagaacggcatgctcggcatggg 1107316 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 986 ctccccagccgctcgccgccgcgat 1010 |||||||||||||||||| |||||| Sbjct: 3301847 ctccccagccgctcgccggcgcgat 3301823
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 52.0 bits (26), Expect = 0.007 Identities = 53/62 (85%) Strand = Plus / Minus Query: 1326 gatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggac 1385 ||||| ||||||| ||||||||||||||| | ||||||||||||| || || |||||| Sbjct: 2898275 gatctggccaactggatgatccccggcaagatggtcaaaggcatgggtggtgcgatggac 2898216 Query: 1386 ct 1387 || Sbjct: 2898215 ct 2898214
>gb|AF276244.1|AF276244 Serratia marcescens succinyl-CoA transferase (scotB) and acetoacetate-CoA transferase (acoT) genes, complete cds Length = 2081 Score = 52.0 bits (26), Expect = 0.007 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||| | |||| |||||||||||||| ||||| ||||| Sbjct: 452 atgatccccggcaagatggtcaagggcatgggcggcgcgatggatctggt 501 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1473 acgctgccgctgaccggcgcacgctgc 1499 |||||||||||||||||||| |||||| Sbjct: 578 acgctgccgctgaccggcgcccgctgc 604 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1257 ttcgccatgatccgcggcggccacgtcga 1285 ||||| ||||||||||||||||| ||||| Sbjct: 368 ttcgctatgatccgcggcggccatgtcga 396
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1257 ttcgccatgatccgcggcggccacgtcgac 1286 |||||||||||||| ||||||||||||||| Sbjct: 3534318 ttcgccatgatccgtggcggccacgtcgac 3534347 Score = 46.1 bits (23), Expect = 0.44 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1360 tcaaaggcatgggcggcgccatggacctggt 1390 |||| ||||||||||| |||||||||||||| Sbjct: 3534421 tcaagggcatgggcggggccatggacctggt 3534451
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 52.0 bits (26), Expect = 0.007 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||| | |||| |||||||| ||||| ||||||||||| Sbjct: 3876719 atgatccccggcaagctgatcaagggcatgggtggcgcgatggacctggt 3876768 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1260 gccatgatccgcggcggccacgtcgac 1286 |||||||||||||||||||| |||||| Sbjct: 3876638 gccatgatccgcggcggccatgtcgac 3876664
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 50.1 bits (25), Expect = 0.028 Identities = 55/65 (84%) Strand = Plus / Minus Query: 1326 gatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggac 1385 ||||| ||||||| |||||||| |||||| | ||||||| ||||||||||| |||||| Sbjct: 4221675 gatctggccaactggatgatcccgggcaagatggtcaaaggaatgggcggcgcgatggac 4221616 Query: 1386 ctggt 1390 |||| Sbjct: 4221615 ttggt 4221611
>emb|AJ854181.1| Frankia alni shc gene for squalene-hopene cyclase Length = 26335 Score = 50.1 bits (25), Expect = 0.028 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1257 ttcgccatgatccgcggcggccacgtcgacgtc 1289 ||||| |||||||||||||||||| |||||||| Sbjct: 93 ttcgcgatgatccgcggcggccacatcgacgtc 125
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 50.1 bits (25), Expect = 0.028 Identities = 31/33 (93%) Strand = Plus / Minus Query: 1257 ttcgccatgatccgcggcggccacgtcgacgtc 1289 ||||| |||||||||||||||||| |||||||| Sbjct: 2726001 ttcgcgatgatccgcggcggccacatcgacgtc 2725969
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 50.1 bits (25), Expect = 0.028 Identities = 40/45 (88%) Strand = Plus / Plus Query: 1042 aagaaggcttctacgtcaaccttggtatcggcatgcccaccctcg 1086 |||| ||||| |||||||||||||| || ||||| |||||||||| Sbjct: 2673627 aagacggcttttacgtcaaccttggcataggcatccccaccctcg 2673671 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatgga 1384 |||||||| |||||| || |||| |||||||| ||||||||||| Sbjct: 2673926 atgatcccaggcaagctcatcaagggcatgggtggcgccatgga 2673969
>ref|XM_823259.1| Trypanosoma brucei TREU927 succinyl-coA:3-ketoacid-coenzyme A transferase mitochondrial precursor (Tb11.02.0290) partial mRNA; nuclear gene for mitochondrial product Length = 1482 Score = 50.1 bits (25), Expect = 0.028 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1317 gccaacggtgatctcgccaactacatgat 1345 |||||||||||||||||||||| |||||| Sbjct: 1141 gccaacggtgatctcgccaacttcatgat 1169
>dbj|AP007165.1| Aspergillus oryzae RIB40 genomic DNA, SC124 Length = 249334 Score = 50.1 bits (25), Expect = 0.028 Identities = 64/77 (83%) Strand = Plus / Minus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggtctccaacccg 1400 ||||| ||||| ||||||||||| || ||||| || |||||||| ||| |||| ||||| Sbjct: 177796 atgattcccgggaaggtcttcaagggtatggggggagccatggatctgatctctaaccct 177737 Query: 1401 gacgagaccaagatcgt 1417 ||| | || |||||||| Sbjct: 177736 gaccaaacgaagatcgt 177720
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 50.1 bits (25), Expect = 0.028 Identities = 55/65 (84%) Strand = Plus / Minus Query: 1326 gatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggac 1385 ||||| ||||||| ||||| || |||||| | |||| |||||||||||||||||||| Sbjct: 108353 gatctggccaactggatgattccgggcaagatggtcaagggcatgggcggcgccatggat 108294 Query: 1386 ctggt 1390 ||||| Sbjct: 108293 ctggt 108289
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 50.1 bits (25), Expect = 0.028 Identities = 55/65 (84%) Strand = Plus / Minus Query: 1326 gatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggac 1385 ||||| ||||||| ||||| || |||||| | |||| |||||||||||||||||||| Sbjct: 109431 gatctggccaactggatgattccgggcaagatggtcaagggcatgggcggcgccatggat 109372 Query: 1386 ctggt 1390 ||||| Sbjct: 109371 ctggt 109367
>emb|AM236085.1| Rhizobium leguminosarum bv. viciae plasmid pRL11 complete genome, strain 3841 Length = 684202 Score = 48.1 bits (24), Expect = 0.11 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1249 ccgaaagcttcgccatgatccgcggcggccacgtcgacgtctccatccttggcgcc 1304 |||| |||||||||||| | ||||||||||| |||||||| | ||||| |||||| Sbjct: 316781 ccgacagcttcgccatggtgcgcggcggccatctcgacgtcgcgatcctcggcgcc 316836
>gb|CP000449.1| Maricaulis maris MCS10, complete genome Length = 3368780 Score = 48.1 bits (24), Expect = 0.11 Identities = 51/60 (85%) Strand = Plus / Minus Query: 1332 gccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctggtc 1391 ||||||| |||||||| |||||| | |||| ||||||||||| || |||||||||||| Sbjct: 1619675 gccaactggatgatcccgggcaagctggtcaagggcatgggcggagcgatggacctggtc 1619616
>gb|CP000444.1| Shewanella sp. MR-7, complete genome Length = 4792610 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatgga 1384 |||||||| |||||| || |||| |||||||||||||| ||||| Sbjct: 2842994 atgatcccaggcaagctcatcaagggcatgggcggcgcaatgga 2843037 Score = 46.1 bits (23), Expect = 0.44 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1249 ccgaaagcttcgccatgatccgcggcggcca 1279 |||||||||| ||||||||||| |||||||| Sbjct: 2842902 ccgaaagctttgccatgatccgtggcggcca 2842932 Score = 44.1 bits (22), Expect = 1.7 Identities = 55/66 (83%) Strand = Plus / Plus Query: 1021 agcgcgcttccaaagaactcaaagaaggcttctacgtcaaccttggtatcggcatgccca 1080 |||||| | |||||||| | |||| |||| |||||||||||| ||||| ||||| |||| Sbjct: 2842674 agcgcgttgccaaagaattacaagacggctactacgtcaacctcggtattggcattccca 2842733 Query: 1081 ccctcg 1086 | |||| Sbjct: 2842734 cgctcg 2842739
>gb|CP000446.1| Shewanella sp. MR-4, complete genome Length = 4706287 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatgga 1384 |||||||| |||||| || |||| |||||||||||||| ||||| Sbjct: 2777643 atgatcccaggcaagctcatcaagggcatgggcggcgcaatgga 2777686 Score = 46.1 bits (23), Expect = 0.44 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1249 ccgaaagcttcgccatgatccgcggcggcca 1279 |||||||||| ||||||||||| |||||||| Sbjct: 2777551 ccgaaagctttgccatgatccgtggcggcca 2777581
>gb|DQ206623.1| Leptosphaeria maculans putative 3-carboxy-cis,cis-muconate cycloisomerase (CMC) gene, partial cds; and probable 3-ketoacyl-CoA thiolase (Thiol), alcohol dehydrogenase IV (Adh4L), probable coenzyme A transferase (SCOT), and putative 3-hydroxyisobutyrate dehydrogenase (3HI) genes, complete cds Length = 9968 Score = 48.1 bits (24), Expect = 0.11 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1360 tcaaaggcatgggcggcgccatggacctggtctccaaccc 1399 ||||||| || ||||||||||||||||| ||| ||||||| Sbjct: 6441 tcaaaggtattggcggcgccatggacctcgtcgccaaccc 6480
>gb|CP000388.1| Pseudoalteromonas atlantica T6c, complete genome Length = 5187005 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1251 gaaagcttcgccatgatccgcggcggccacgt 1282 |||||||| || |||||||||||||||||||| Sbjct: 1926620 gaaagctttgctatgatccgcggcggccacgt 1926589
>gb|CP000377.1| Silicibacter sp. TM1040, complete genome Length = 3200938 Score = 48.1 bits (24), Expect = 0.11 Identities = 60/72 (83%) Strand = Plus / Plus Query: 1320 aacggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgcc 1379 |||||||| || ||||||| |||||||| ||||| | ||||||| ||||||||||| Sbjct: 2463367 aacggtgacctggccaactggatgatcccgggcaaactggtcaaaggtatgggcggcgcg 2463426 Query: 1380 atggacctggtc 1391 ||||| |||||| Sbjct: 2463427 atggatctggtc 2463438
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 48.1 bits (24), Expect = 0.11 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1332 gccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacct 1387 ||||||| |||||||| |||||| | |||| |||||||||||||| |||||||| Sbjct: 1264177 gccaactggatgatcccgggcaagatggtcaagggcatgggcggcgcgatggacct 1264232
>gb|AF499447.1| Bacillus subtilis strain A1/3 YxjC (yxjC) gene, partial cds; probable succinyl CoA:3-oxoacid CoA-transferase, subunit A (scoA), probable succinyl CoA:3-oxoacid CoA-transferase; subunit B (scoB), YxjF (yxjF), putative malonyl-CoA transacylase (bmyD), and bacillomycin L synthetase A (bmyA) genes, complete cds; and bacillomycin L synthetase B (bmyB) gene, partial cds Length = 16539 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1360 tcaaaggcatgggcggcgccatggacctggtc 1391 ||||||| |||||||||||||||||| ||||| Sbjct: 1398 tcaaaggaatgggcggcgccatggacttggtc 1429
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1254 agcttcgccatgatccgcggcggc 1277 |||||||||||||||||||||||| Sbjct: 511468 agcttcgccatgatccgcggcggc 511445
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatgga 1384 ||||||||||||||| | |||| |||||||||||||| ||||| Sbjct: 961644 atgatccccggcaagctggtcaagggcatgggcggcgcgatgga 961601
>gb|AE005695.1| Caulobacter crescentus CB15 section 21 of 359 of the complete genome Length = 11626 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1360 tcaaaggcatgggcggcgccatggacctggtc 1391 |||| ||||||||||| ||||||||||||||| Sbjct: 1174 tcaagggcatgggcggggccatggacctggtc 1205
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 48.1 bits (24), Expect = 0.11 Identities = 93/116 (80%) Strand = Plus / Minus Query: 1269 cgcggcggccacgtcgacgtctccatccttggcgccctccaagtcggcgccaacggtgat 1328 |||||||||||| ||||| ||||||| || |||||| | || |||| | ||||| || Sbjct: 161649 cgcggcggccacatcgacctctccattctcggcgccatgcaggtcgcccagaacggcgac 161590 Query: 1329 ctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatgga 1384 |||||||||| ||||| || |||||| | | || |||||||||||||| ||||| Sbjct: 161589 ctcgccaactggatgattccgggcaagatggtgaagggcatgggcggcgcgatgga 161534 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1047 ggcttctacgtcaaccttggtatcggcat 1075 ||||||||||||||||| || |||||||| Sbjct: 161871 ggcttctacgtcaacctcggcatcggcat 161843
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1341 atgatccccggcaaggtcttcaaaggcatgggcggcgccatgga 1384 |||||||| |||||| || |||| |||||||||||||| ||||| Sbjct: 1988238 atgatcccaggcaagctcatcaagggcatgggcggcgcgatgga 1988195 Score = 42.1 bits (21), Expect = 6.8 Identities = 51/61 (83%) Strand = Plus / Minus Query: 1021 agcgcgcttccaaagaactcaaagaaggcttctacgtcaaccttggtatcggcatgccca 1080 |||||| | |||||||| | |||| |||| |||||||||||| ||||| ||||| |||| Sbjct: 1988558 agcgcgttgccaaagaattacaagacggctactacgtcaacctcggtattggcattccca 1988499 Query: 1081 c 1081 | Sbjct: 1988498 c 1988498
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 48.1 bits (24), Expect = 0.11 Identities = 102/128 (79%) Strand = Plus / Minus Query: 1257 ttcgccatgatccgcggcggccacgtcgacgtctccatccttggcgccctccaagtcggc 1316 ||||| |||||||||||||||||| || || || | ||||| ||||| | || ||| || Sbjct: 2969424 ttcgcgatgatccgcggcggccacatcaacctcgcgatcctgggcgcgatgcaggtcagc 2969365 Query: 1317 gccaacggtgatctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggc 1376 ||||| || ||||| |||| ||||||||||||||| | |||| || ||||||||| Sbjct: 2969364 aagaacggcgacctcgcgaactggatgatccccggcaagatgatcaaggggatgggcggc 2969305 Query: 1377 gccatgga 1384 || ||||| Sbjct: 2969304 gcgatgga 2969297
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 46.1 bits (23), Expect = 0.44 Identities = 50/59 (84%) Strand = Plus / Minus Query: 1329 ctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacct 1387 |||||||||| ||| ||||||| ||| | |||| |||||||||||||| |||||||| Sbjct: 4096288 ctcgccaactggatggtccccggaaagatggtcaagggcatgggcggcgcgatggacct 4096230 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1257 ttcgccatgatccgcggcggccacgtcgac 1286 |||| ||||||||||||||||||| ||||| Sbjct: 4096360 ttcggcatgatccgcggcggccacatcgac 4096331
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 543 ggtggcgctggcatcccagcttt 565 ||||||||||||||||||||||| Sbjct: 4863181 ggtggcgctggcatcccagcttt 4863203
>gb|AY639386.1| Streptomyces nodosus oxidoreductase, regulatory protein, hypothetical protein, methyltransferase, transcriptional regulator, AmphRI, AmphRII, AmphRIII, AmphRIV, LysR-type transcriptional regulator, 3-ketoacyl CoA thiolase, CoA transferase subunit A, and CoA transferase subunit B genes, complete cds Length = 20832 Score = 46.1 bits (23), Expect = 0.44 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1256 cttcgccatgatccgcggcggccacgtcgac 1286 |||||||||||| |||||||||||| ||||| Sbjct: 20358 cttcgccatgatgcgcggcggccacctcgac 20388
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1365 ggcatgggcggcgccatggacct 1387 ||||||||||||||||||||||| Sbjct: 1631180 ggcatgggcggcgccatggacct 1631158
>gb|AE012160.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 68 of 460 of the complete genome Length = 10029 Score = 46.1 bits (23), Expect = 0.44 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1360 tcaaaggcatgggcggcgccatggacctggt 1390 |||| |||||||||||||| ||||||||||| Sbjct: 7757 tcaagggcatgggcggcgcgatggacctggt 7787
>gb|AF204145.1| Xanthomonas campestris pv. campestris LPS biosynthetic cluster, partial sequence; and putative electron-transferring flavoprotein beta subunit (etfS) and putative electron-transferring flavoprotein alpha subunit (etfL) genes, complete cds Length = 37753 Score = 46.1 bits (23), Expect = 0.44 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1360 tcaaaggcatgggcggcgccatggacctggt 1390 |||| |||||||||||||| ||||||||||| Sbjct: 1328 tcaagggcatgggcggcgcgatggacctggt 1298
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.44 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1360 tcaaaggcatgggcggcgccatggacctggt 1390 |||| |||||||||||||| ||||||||||| Sbjct: 4287799 tcaagggcatgggcggcgcgatggacctggt 4287769
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 46.1 bits (23), Expect = 0.44 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1360 tcaaaggcatgggcggcgccatggacctggt 1390 |||| |||||||||||||||||||| ||||| Sbjct: 44812 tcaagggcatgggcggcgccatggatctggt 44782
>dbj|AB050193.2| Homo sapiens h-scot-t mRNA for succinyl CoA: 3-oxo acid CoA transferase, complete cds Length = 1760 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1271 aaaggcatgggcggtgccatggacttggtgtcca 1304
>ref|XM_001212474.1| Aspergillus terreus NIH2624 succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial precursor (ATEG_03296) mRNA, complete cds Length = 1557 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1371 ggcggcgccatggacctggtctccaacccg 1400 |||||||| |||||||| |||||||||||| Sbjct: 1273 ggcggcgcgatggaccttgtctccaacccg 1302
>ref|XR_025158.1| PREDICTED: Pan troglodytes similar to FKSG25 (LOC456780), mRNA Length = 1665 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1320 aaaggcatgggcggtgccatggacttggtgtcca 1353
>gb|DQ896660.1| Homo sapiens clone FLH196394.01L; RZPDo839C10155D OXCT2 mRNA, partial sequence Length = 1542 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1252 aaaggcatgggcggtgccatggacttggtgtcca 1285
>gb|DQ893340.1| Synthetic construct Homo sapiens clone FLH196398.01X; RZPDo839C10156D OXCT2 mRNA, complete sequence Length = 1542 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1252 aaaggcatgggcggtgccatggacttggtgtcca 1285
>ref|XR_015772.1| PREDICTED: Homo sapiens similar to 3-oxoacid CoA transferase 2 (LOC732215), mRNA Length = 1593 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1248 aaaggcatgggcggtgccatggacttggtgtcca 1281
>ref|XM_001111685.1| PREDICTED: Macaca mulatta similar to 3-oxoacid CoA transferase 2 (LOC718677), mRNA Length = 2076 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 982 aaaggcatgggcggtgccatggacttggtgtcca 1015
>ref|XR_014165.1| PREDICTED: Macaca mulatta similar to 3-oxoacid CoA transferase 2 (LOC716297), mRNA Length = 1809 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1317 aaaggcatgggcggtgccatggacttggtgtcca 1350
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 44.1 bits (22), Expect = 1.7 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1329 ctcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctg 1388 |||||||||| ||||| ||||||||| | | || || ||||||||||| ||||||||| Sbjct: 864542 ctcgccaactggatgattcccggcaagatggtgaaggggatgggcggcgcgatggacctg 864601 Query: 1389 gt 1390 || Sbjct: 864602 gt 864603
>gb|BC072388.1| Homo sapiens 3-oxoacid CoA transferase 2, mRNA (cDNA clone MGC:87924 IMAGE:5588771), complete cds Length = 1833 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1323 aaaggcatgggcggtgccatggacttggtgtcca 1356
>ref|XM_656519.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4007.2), mRNA Length = 2766 Score = 44.1 bits (22), Expect = 1.7 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1371 ggcggcgccatggacctggtctccaacccggacgagaccaag 1412 ||||| ||||||||||||||| ||||||| || |||||||| Sbjct: 1237 ggcggtgccatggacctggtcgccaaccccgagaagaccaag 1278
>gb|BC030015.1| Homo sapiens 3-oxoacid CoA transferase 2, mRNA (cDNA clone MGC:26956 IMAGE:4822795), complete cds Length = 1758 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1264 aaaggcatgggcggtgccatggacttggtgtcca 1297
>dbj|AK093089.1| Homo sapiens cDNA FLJ35770 fis, clone TESTI2005072, moderately similar to SUCCINYL-COA:3-KETOACID-COENZYME A TRANSFERASE PRECURSOR (EC 2.8.3.5) Length = 1797 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1319 aaaggcatgggcggtgccatggacttggtgtcca 1352
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1257 ttcgccatgatccgcggcggccacgtcgac 1286 ||||||||||| |||||||||||| ||||| Sbjct: 2404463 ttcgccatgatgcgcggcggccacctcgac 2404492
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 44.1 bits (22), Expect = 1.7 Identities = 52/62 (83%) Strand = Plus / Minus Query: 1330 tcgccaactacatgatccccggcaaggtcttcaaaggcatgggcggcgccatggacctgg 1389 ||||||||| ||| | ||||||||| | |||| |||||||| ||||||||||| |||| Sbjct: 1813371 tcgccaactggatggtgcccggcaagatggtcaagggcatgggtggcgccatggatctgg 1813312 Query: 1390 tc 1391 || Sbjct: 1813311 tc 1813310
>emb|AL365277.23| Human DNA sequence from clone RP11-69E11 on chromosome 1 Contains the 3' end of the MACF1 gene for microtubule-actin crosslinking factor 1, the BMP8A gene for bone morphogenetic protein 8A, a 3-oxoacid CoA transferase 2 (OXCT2) pseudogene, a novel gene, a peptidylprolyl isomerase E (cyclophilin E) (PPIE) pseudogene, the 3' end of the PABPC4 gene for cytoplasmic 4 (inducible form) poly(A) binding protein, part of a novel gene and two CpG islands, complete sequence Length = 115968 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 58950 aaaggcatgggcggtgccatggacttggtgtcca 58983
>emb|AL033527.26|HS118J21 Human DNA sequence from clone RP1-118J21 on chromosome 1p34.1-35.3 Contains the 5' end of the BMP8B gene for bone morphogenetic protein 8b (osteogenic protein 2), the 3' end of the PPIE gene for peptidylprolyl isomerase E (cyclophilin E), the OXCT2 gene for 3-oxoacid CoA transferase 2, the gene for tRNA isopentenyltransferase 1 (IPT), the MYCL1 gene for v-myc myelocytomatosis viral oncogene homolog 1 lung carcinoma derived (avian), a novel gene and seven CpG islands, complete sequence Length = 166496 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 10534 aaaggcatgggcggtgccatggacttggtgtcca 10501
>ref|NM_022120.1| Homo sapiens 3-oxoacid CoA transferase 2 (OXCT2), mRNA gb|AY013700.1| Homo sapiens FKSG25 (FKSG25) mRNA, complete cds Length = 1824 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1345 aaaggcatgggcggtgccatggacttggtgtcca 1378
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1257 ttcgccatgatccgcggcggccacgtcgac 1286 ||||||||||| |||||||||||| ||||| Sbjct: 231995 ttcgccatgatgcgcggcggccacctcgac 232024 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1369 tgggcggcgccatggacctgg 1389 ||||||||||||||||||||| Sbjct: 232110 tgggcggcgccatggacctgg 232130
>dbj|AK024440.1| Homo sapiens mRNA for FLJ00030 protein, partial cds Length = 4404 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 450 aaaggcatgggcggtgccatggacttggtgtcca 483
>ref|XM_954135.1| Neurospora crassa OR74A hypothetical protein (NCU06881.1) partial mRNA Length = 1551 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1584 gtcactgttgatgagatcaagg 1605 |||||||||||||||||||||| Sbjct: 1477 gtcactgttgatgagatcaagg 1498
>emb|AL033526.24|HS110F11 Human DNA sequence from clone RP1-110F11 on chromosome 1p33-34.3, complete sequence Length = 112339 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 14634 aaaggcatgggcggtgccatggacttggtgtcca 14667
>ref|NG_001331.1| Homo sapiens 3-oxoacid CoA transferase 2 pseudogene (OXCT2P) on chromosome 1 dbj|AB052900.1| Homo sapiens scot-t pseudogene Length = 1616 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1362 aaaggcatgggcggcgccatggacctggtctcca 1395 |||||||||||||| ||||||||| |||| |||| Sbjct: 1241 aaaggcatgggcggtgccatggacttggtgtcca 1274
>gb|CP000469.1| Shewanella sp. ANA-3, complete genome Length = 4972204 Score = 42.1 bits (21), Expect = 6.8 Identities = 51/61 (83%) Strand = Plus / Minus Query: 1021 agcgcgcttccaaagaactcaaagaaggcttctacgtcaaccttggtatcggcatgccca 1080 |||||| | |||||||| | |||| |||| |||||||||||| ||||| ||||| |||| Sbjct: 1958177 agcgcgttgccaaagaattacaagacggctactacgtcaacctcggtattggcattccca 1958118 Query: 1081 c 1081 | Sbjct: 1958117 c 1958117
>ref|NM_001059670.1| Oryza sativa (japonica cultivar-group) Os04g0485800 (Os04g0485800) mRNA, complete cds Length = 2782 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1629 gtggcggagagtttggaggctatgg 1653 |||| |||||||||||||||||||| Sbjct: 878 gtggaggagagtttggaggctatgg 902
>emb|AM167904.1| Bordetella avium 197N complete genome Length = 3732255 Score = 42.1 bits (21), Expect = 6.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1052 ctacgtcaaccttggtatcggcatgcccaccct 1084 |||||||||||| ||||||||| |||| ||||| Sbjct: 320220 ctacgtcaacctgggtatcggcctgcctaccct 320188
>gb|AC189568.1| Brassica rapa subsp. pekinensis clone KBrH009I04, complete sequence Length = 162363 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1588 ctgttgatgagatcaaggaga 1608 ||||||||||||||||||||| Sbjct: 147302 ctgttgatgagatcaaggaga 147282
>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete sequence Length = 59348 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1629 gtggcggagagtttggaggctatgg 1653 |||| |||||||||||||||||||| Sbjct: 52188 gtggaggagagtttggaggctatgg 52164
>ref|XM_360767.1| Magnaporthe grisea 70-15 hypothetical protein (MG03310.4) partial mRNA Length = 1677 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1511 catcaccgacctctgcgtctt 1531 ||||||||||||||||||||| Sbjct: 289 catcaccgacctctgcgtctt 269
>ref|NM_120903.2| Arabidopsis thaliana unknown protein (AT5G08200) mRNA, complete cds Length = 1895 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 gactgttctgtctgctggttt 280 ||||||||||||||||||||| Sbjct: 937 gactgttctgtctgctggttt 917
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 6.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1164 accgaagaggaagtcgacatcgacatcattaacgccggcaaagagaccgtcac 1216 |||||||| ||||||||| ||| |||| ||||||||||| |||||||||| Sbjct: 1592687 accgaagacgaagtcgacgccgatctcatcaacgccggcaagcagaccgtcac 1592739
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1360 tcaaaggcatgggcggcgccatgga 1384 ||||||||||||||||||| ||||| Sbjct: 1728851 tcaaaggcatgggcggcgcgatgga 1728827
>ref|XM_658181.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5669.2), mRNA Length = 1602 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1371 ggcggcgccatggacctggtctccaaccc 1399 |||||||| |||||||| ||||||||||| Sbjct: 1318 ggcggcgcaatggacctcgtctccaaccc 1346
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1317 gccaacggtgatctcgccaactaca 1341 |||||||||||||||||| |||||| Sbjct: 2433088 gccaacggtgatctcgcctactaca 2433112
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1130 cgaaaacggcatcctcggcat 1150 ||||||||||||||||||||| Sbjct: 3885759 cgaaaacggcatcctcggcat 3885739
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 6.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 1347 cccggcaaggtcttcaaaggcatgggcggcgccatggacctggtc 1391 ||||||||| | |||| |||||||| ||||| |||||||||||| Sbjct: 2955480 cccggcaagctggtcaagggcatggggggcgcgatggacctggtc 2955436
>gb|BT008509.1| Arabidopsis thaliana At5g08200 gene, complete cds Length = 1230 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 gactgttctgtctgctggttt 280 ||||||||||||||||||||| Sbjct: 588 gactgttctgtctgctggttt 568
>gb|AY140035.1| Arabidopsis thaliana unknown protein (At5g08200) mRNA, complete cds Length = 1898 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 gactgttctgtctgctggttt 280 ||||||||||||||||||||| Sbjct: 940 gactgttctgtctgctggttt 920
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1362 aaaggcatgggcggcgccatggacctggt 1390 ||||||||||||||||| |||||| |||| Sbjct: 1524029 aaaggcatgggcggcgcaatggacttggt 1524001
>ref|XM_745068.1| Aspergillus fumigatus Af293 coenzyme A transferase (Afu1g04120) partial mRNA Length = 1515 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 354 actgtcgtctccaacaatgccggaa 378 |||||||||||||||||||| |||| Sbjct: 223 actgtcgtctccaacaatgctggaa 247 Score = 42.1 bits (21), Expect = 6.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1020 aagcgcgcttccaaagaactcaaagaaggcttctacgtcaaccttggtatcgg 1072 |||||||| |||| |||||||| || ||| | ||||||||||| |||||||| Sbjct: 886 aagcgcgccgccaaggaactcaaggacggcatgtacgtcaacctcggtatcgg 938
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1125 cagagcgaaaacggcatcctc 1145 ||||||||||||||||||||| Sbjct: 673107 cagagcgaaaacggcatcctc 673087
>emb|CR733769.2|CNS0GSYG Tetraodon nigroviridis full-length cDNA Length = 1243 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1359 ttcaaaggcatgggcggcgcc 1379 ||||||||||||||||||||| Sbjct: 926 ttcaaaggcatgggcggcgcc 946
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 985 tctccccagccgctcgccgcc 1005 ||||||||||||||||||||| Sbjct: 28498329 tctccccagccgctcgccgcc 28498349
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1629 gtggcggagagtttggaggctatgg 1653 |||| |||||||||||||||||||| Sbjct: 24257625 gtggaggagagtttggaggctatgg 24257601
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 885 ggcatctacgtcgaccgcatt 905 ||||||||||||||||||||| Sbjct: 2639849 ggcatctacgtcgaccgcatt 2639829
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 6.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1263 atgatccgcggcggccacgtcgacgtctccatccttggcgc 1303 |||||||||||||| ||| |||||||| || |||| ||||| Sbjct: 2079701 atgatccgcggcgggcacatcgacgtcgccgtcctcggcgc 2079741
>emb|BX927155.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 8/10 Length = 349136 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 885 ggcatctacgtcgaccgcatt 905 ||||||||||||||||||||| Sbjct: 167022 ggcatctacgtcgaccgcatt 167002
>emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BAC clone F8L15 (ESSA project) Length = 125411 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 gactgttctgtctgctggttt 280 ||||||||||||||||||||| Sbjct: 3684 gactgttctgtctgctggttt 3664
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1629 gtggcggagagtttggaggctatgg 1653 |||| |||||||||||||||||||| Sbjct: 80037 gtggaggagagtttggaggctatgg 80013
>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15, complete sequence Length = 150864 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1629 gtggcggagagtttggaggctatgg 1653 |||| |||||||||||||||||||| Sbjct: 146850 gtggaggagagtttggaggctatgg 146826
>emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA project) Length = 89988 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 gactgttctgtctgctggttt 280 ||||||||||||||||||||| Sbjct: 66535 gactgttctgtctgctggttt 66515
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 985 tctccccagccgctcgccgcc 1005 ||||||||||||||||||||| Sbjct: 105362 tctccccagccgctcgccgcc 105382
>dbj|AK102446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093N24, full insert sequence Length = 2571 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1629 gtggcggagagtttggaggctatgg 1653 |||| |||||||||||||||||||| Sbjct: 668 gtggaggagagtttggaggctatgg 692
>dbj|AK100299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077K22, full insert sequence Length = 2784 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1629 gtggcggagagtttggaggctatgg 1653 |||| |||||||||||||||||||| Sbjct: 880 gtggaggagagtttggaggctatgg 904
>emb|BX830647.1|CNS0A275 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1899 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 gactgttctgtctgctggttt 280 ||||||||||||||||||||| Sbjct: 888 gactgttctgtctgctggttt 868 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 253,322,161 Number of extensions: 12641519 Number of successful extensions: 260583 Number of sequences better than 10.0: 138 Number of HSP's gapped: 260578 Number of HSP's successfully gapped: 202 Length of query: 1789 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1766 Effective length of database: 18,503,978,556 Effective search space: 32678026129896 Effective search space used: 32678026129896 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
