ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf78h02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103033:Os10g0546300 | 36 | 0.019 | 2 | Os08g0542000:Os08g0542000 | 31 | 0.60 | 3 | AK105999:Os11g0531300 | 28 | 3.9 | 4 | AK105736:Os11g0531300 | 28 | 3.9 | 5 | AK068785:Os05g0462600 | 28 | 3.9 | 6 | AK065879:Os05g0462600 | 28 | 3.9 |
|---|
>AK103033:Os10g0546300 | Length = 1074 Score = 35.8 bits (81), Expect = 0.019 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -1 Query: 339 ISENPRSKQKKNP-TSENLWNKPSYQLRGTTTPCMNHVFELGRPRTWQLGSLQYLTYLGR 163 +S+ S NP TS + + P YQLR + H FE GR WQL + + L Sbjct: 459 MSDRTSSSDVSNPDTSTSGTDSPFYQLRTDAAKLVAHAFERGRRNLWQLATSRLSVLLSS 518 Query: 162 DLV 154 +V Sbjct: 519 SVV 521
>Os08g0542000:Os08g0542000 | Length = 529 Score = 30.8 bits (68), Expect = 0.60 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = -1 Query: 453 LADSKHCPYWPTENPTDTGCLVWDSNHPSTD----HIFTSRRISENPRSKQKKNPTSE 292 +ADSK PY P EN D + ++PS D + +++ + ++K+KK P + Sbjct: 83 VADSKGAPYSPPENDDDA-----EVDYPSQDGAQGTVIAAKKKKKKSKAKKKKGPLQQ 135
>AK105999:Os11g0531300 | Length = 445 Score = 28.1 bits (61), Expect = 3.9 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -1 Query: 306 NPTSENLWNKPSYQLRGTTTPCMNHVFELGRPR 208 +P S ++N PS L G+TTP N++ PR Sbjct: 155 SPCSPVVFNSPSNHLAGSTTPTPNNLQVFNGPR 187
>AK105736:Os11g0531300 | Length = 445 Score = 28.1 bits (61), Expect = 3.9 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -1 Query: 306 NPTSENLWNKPSYQLRGTTTPCMNHVFELGRPR 208 +P S ++N PS L G+TTP N++ PR Sbjct: 155 SPCSPVVFNSPSNHLAGSTTPTPNNLQVFNGPR 187
>AK068785:Os05g0462600 | Length = 835 Score = 28.1 bits (61), Expect = 3.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -1 Query: 387 WDSNHPSTDHIFTSRRISENPRSKQKKNPTSENLWN 280 WDS H T+ ++S+ P KQK + S+ + N Sbjct: 428 WDSRKFFQSHHATANKVSQRPAKKQKISSYSDQMQN 463
>AK065879:Os05g0462600 | Length = 409 Score = 28.1 bits (61), Expect = 3.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -1 Query: 387 WDSNHPSTDHIFTSRRISENPRSKQKKNPTSENLWN 280 WDS H T+ ++S+ P KQK + S+ + N Sbjct: 93 WDSRKFFQSHHATANKVSQRPAKKQKISSYSDQMQN 128 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,694,517 Number of extensions: 312241 Number of successful extensions: 732 Number of sequences better than 10.0: 6 Number of HSP's gapped: 732 Number of HSP's successfully gapped: 6 Length of query: 181 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 87 Effective length of database: 11,636,001 Effective search space: 1012332087 Effective search space used: 1012332087 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
