ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf78h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8WZ42:TITIN_HUMAN Titin - Homo sapiens (Human) 33 0.64
2Q6CFT4:VPS27_YARLI Vacuolar protein sorting-associated protein 2... 31 3.2
3Q7SHG9:CG121_NEUCR Protein cgi-121 - Neurospora crassa 30 4.2
4P12380:HUTC_KLEAE Histidine utilization repressor - Klebsiella a... 30 7.0
5P55201:BRPF1_HUMAN Peregrin - Homo sapiens (Human) 29 9.2
6P87377:VEGT_XENLA T-box protein VEGT - Xenopus laevis (African c... 29 9.3
7Q8NCE2:MTMRE_HUMAN Myotubularin-related protein 14 precursor - H... 29 9.3

>Q8WZ42:TITIN_HUMAN Titin - Homo sapiens (Human)|
          Length = 34350
 Score = 33.1 bits (74), Expect = 0.64
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
 Frame = -1

Query: 372   PSTDHIFTSRRISE-----NPRSKQKKNPTSENLWNKPSYQLRGTTTPCMNHVFELGRPR 208
             PS+D I   R I       NP+ K K   T++ +W KP   L    +P + +V E  +P 
Sbjct: 18717 PSSDPIKACRPIKPPGPPINPKLKDKSRETADLVWTKP---LSDGGSPILGYVVECQKPG 18773

Query: 207   TWQLGSLQYLTYLGRDLVVRHTSSRV 130
             T Q         + +D ++R  + RV
Sbjct: 18774 TAQWNR------INKDELIRQCAFRV 18793



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>Q6CFT4:VPS27_YARLI Vacuolar protein sorting-associated protein 27 - Yarrowia|
           lipolytica (Candida lipolytica)
          Length = 565

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 402 TGCLVWDSNHPSTDHIFTSRRISENPRSKQKKNPTSENLWNKPSYQLRG 256
           TG   + SN P T H+ T+      P + Q   P ++N++N PSYQ  G
Sbjct: 481 TGQAPYLSNQP-TGHL-TNHYTGSAPSAPQYGGPPAQNVYNAPSYQYSG 527



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>Q7SHG9:CG121_NEUCR Protein cgi-121 - Neurospora crassa|
          Length = 207

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 336 SENPRSKQKKNPTSENLWNKPSYQLRGTTTPCMNHVFELGRPRTW 202
           SEN     ++ PT E++W   +  ++GT  P  N   EL +   W
Sbjct: 122 SENSTITSEQQPTPESIWQHLTTHIQGTPVPLTNE--ELAKSTDW 164



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>P12380:HUTC_KLEAE Histidine utilization repressor - Klebsiella aerogenes|
          Length = 241

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
 Frame = -3

Query: 286 VEQTELPVARNHNAMHEPCL----RTWKTTHMAARISSI----SYLLGQRFG 155
           V+ T    A  H   H+PCL    RTW TTH+ +    +     Y L  RFG
Sbjct: 189 VQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFG 240



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>P55201:BRPF1_HUMAN Peregrin - Homo sapiens (Human)|
          Length = 1214

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -3

Query: 436  LSLLAD*KSNRHWLPRVGLEPSLH*SHIHITQNLRKSQV*TKKESNLRKFVE 281
            L L  D K    WLPR  L P      + + Q+L K ++   ++SN+RK V+
Sbjct: 1144 LVLFFDNKRTWQWLPRTKLVP------LGVNQDLDKEKMLEGRKSNIRKSVQ 1189



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>P87377:VEGT_XENLA T-box protein VEGT - Xenopus laevis (African clawed frog)|
          Length = 455

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = -1

Query: 387 WDSNHPSTDHIFTSRRISENPRSKQKKNPTSENLWNKPSYQLRGTTTPCMNHVFELGRPR 208
           W S+H +   +      SE    +Q+   +S N +NK  Y+    ++  ++  FELG P 
Sbjct: 289 WVSDHEANQGLTPHSPESEGANQEQQVPTSSSNFYNKSHYR---RSSQHLSSPFELGEPS 345

Query: 207 TWQL 196
           + +L
Sbjct: 346 SRRL 349



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>Q8NCE2:MTMRE_HUMAN Myotubularin-related protein 14 precursor - Homo sapiens (Human)|
          Length = 650

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
 Frame = -1

Query: 426 WPTENPTDTGCLVWDSNHPSTDHIFTSRRISENPRSKQKKNPTSENLWNKPSYQLRGTTT 247
           W   + +    ++W+   PS D + + + ++E   S    +  S+N +   S  L     
Sbjct: 478 WRKSHSSSPQSVLWNRPQPSEDRLPSQQGLAEARSSSSSSSNHSDNFFRMGSSPLEVPKP 537

Query: 246 PCMNHVFELGRPRTWQLGSLQYLTYLG--RDLVVRHTSSRVWF 124
             ++H    G   +   GS Q +T  G  ++  V HT S + F
Sbjct: 538 RSVDHPLP-GSSLSTDYGSWQMVTGCGSIQERAVLHTDSSLPF 579


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 90,982,330
Number of extensions: 1889624
Number of successful extensions: 4588
Number of sequences better than 10.0: 7
Number of HSP's gapped: 4587
Number of HSP's successfully gapped: 7
Length of query: 181
Length of database: 100,686,439
Length adjustment: 106
Effective length of query: 75
Effective length of database: 71,611,169
Effective search space: 5370837675
Effective search space used: 5370837675
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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