ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf78g24 |
|---|---|
| Clone Library Name | barley_pub |
>P35684:RL3_ORYSJ 60S ribosomal protein L3 - Oryza sativa subsp. japonica (Rice)| Length = 389 Score = 775 bits (2002), Expect = 0.0 Identities = 373/389 (95%), Positives = 385/389 (98%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKFEHPRHGSLGFLPRKR SRHRGKVKSFPKDD KPCHLT+F+GYKAGMTHIVREV Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLR+LNSVWAQHLSE+VRRRFYK Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NWCKSKKKAFTKYALKYDSDAGKKEIQ+QLEKMKKYA+IVRVIAHTQIRKMKGLKQKKAH Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 LMEIQ+NGGTIADKVDYGYKFFEKE+PV+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESH ACT Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE+IKL Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKLKA 1241 KFIDTSSKFGHGRFQTT+EKQRF+GKLKA Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389
>P17094:RL31_ARATH 60S ribosomal protein L3-1 - Arabidopsis thaliana (Mouse-ear cress)| Length = 389 Score = 702 bits (1813), Expect = 0.0 Identities = 330/387 (85%), Positives = 363/387 (93%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKFEHPRHGSLGFLPRKR +RHRGKVK+FPKDDQ KPC TAF+GYKAGMTHIVREV Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 EKPGSKLHKKETCEAVTIIETP +V+VG+VAYVKTPRGLR+LN+VWAQHLSE+VRRRFYK Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFT YA +YDS+ GKK IQ QLEKMKKYAT++RV+AHTQIRKMKGLKQKKAH Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 +MEIQ+NGGTIA KVD+ Y FFEK++P+EAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTE+NKK+Y++GK G E+H A T Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 E+DRTEKD+TPMGGFPHYG+VK DYLMIKGCCVGPKKRVVTLRQSLL QTSRLALE+IKL Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKL 1235 KFIDT+S FGHGRFQT+ EK RFY ++ Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387
>P22738:RL32_ARATH 60S ribosomal protein L3-2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 390 Score = 688 bits (1775), Expect = 0.0 Identities = 322/386 (83%), Positives = 360/386 (93%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKFEHPRHGSLGFLPRKR SRHRGKVK+FPKDD KPC LT+FLGYKAGMTHIVR+V Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 EKPGSKLHKKETCEAVTIIETPP+V+VG+V YVKTPRGLR+L +VWAQHLSE++RRRFYK Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFT+Y+ K++++ GKK+IQ QLEKMKKY +++RV+AHTQIRKMKGLKQKKAH Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 L EIQ+NGG IA KVDY FEK+VPV+A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVY++GK GQE+H A T Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 E+DRTEKDITPMGGFPHYG+VK DYLMIKGCCVGPKKRVVTLRQ+LLKQTSRLA+E+IKL Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGK 1232 KFID +S GHGRFQT++EK +FYG+ Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386
>P27659:RL3_MOUSE 60S ribosomal protein L3 - Mus musculus (Mouse)| Length = 403 Score = 561 bits (1447), Expect = e-159 Identities = 269/394 (68%), Positives = 325/394 (82%), Gaps = 6/394 (1%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHGSLGFLPRKR SRHRGKVKSFPKDD KP HLTAFLGYKAGMTHIVREV Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK++KKE EAVTI+ETPP+V+VG+V YV+TPRGLRT +V+A+H+S++ +RRFYK Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKY K+ D GKK+++ MKKY ++R+IAHTQ+R + L+QKKAH Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 LMEIQVNGGT+A+K+D+ + E++VPV VF +DEMID+IGVTKGKGY+GV +RW + Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQ-E 956 LPRKTHRGLRKVACIGAWHPARV++TVARAGQ GYHHRTE+NKK+YKIG K G+ Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299 Query: 957 SHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 1136 + A T++D ++K I P+GGF HYG V D++M+KGC VG KKRV+TLR+SLL QT R A Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359 Query: 1137 LEDIKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 LE I LKFIDT+SKFGHGRFQT EEK+ F G LK Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>P21531:RL3_RAT 60S ribosomal protein L3 - Rattus norvegicus (Rat)| Length = 403 Score = 560 bits (1443), Expect = e-159 Identities = 268/394 (68%), Positives = 325/394 (82%), Gaps = 6/394 (1%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHGSLGFLPRKR SRHRGKVKSFPKDD KP HLTAFLGYKAGMTHIVREV Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK++KKE EAVTI+ETPP+V+VG+V YV+TPRGLRT +V+A+H+S++ +RRFYK Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKY K+ D GKK+++ MKKY ++R+IAHTQ+R + L+QKKAH Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 LMEIQVNGGT+A+K+D+ + E++VPV VF +DEMID+IGVTKGKGY+GV +RW + Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQ-E 956 LPRKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG K G+ Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299 Query: 957 SHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 1136 + A T++D ++K I P+GGF HYG V D++M+KGC VG KKRV+TLR+SLL QT R A Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359 Query: 1137 LEDIKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 LE I LKFIDT+SKFGHGRFQT EEK+ F G LK Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>P39023:RL3_HUMAN 60S ribosomal protein L3 - Homo sapiens (Human)| Length = 403 Score = 558 bits (1437), Expect = e-158 Identities = 268/394 (68%), Positives = 325/394 (82%), Gaps = 6/394 (1%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHGSLGFLPRKR SRHRGKVKSFPKDD KP HLTAFLGYKAGMTHIVREV Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK++KKE EAVTI+ETPP+V+VG+V YV+TPRGLRT +V+A+H+S++ +RRFYK Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKY K+ + GKK+++ MKKY ++RVIAHTQ+R + L+QKKAH Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 LMEIQVNGGT+A+K+D+ + E++VPV VF +DEMID+IGVTKGKGY+GV +RW + Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQ-E 956 LPRKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG K G+ Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299 Query: 957 SHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 1136 + A T++D ++K I P+GGF HYG V D++M+KGC VG KKRV+TLR+SLL QT R A Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359 Query: 1137 LEDIKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 LE I LKFIDT+SKFGHGRFQT EEK+ F G LK Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>P39872:RL3_BOVIN 60S ribosomal protein L3 - Bos taurus (Bovine)| Length = 403 Score = 556 bits (1434), Expect = e-158 Identities = 267/394 (67%), Positives = 324/394 (82%), Gaps = 6/394 (1%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHGSLGFLPRKR SRHRGKVKSFPKDD KP HLTAFLGYKAGMTHIVREV Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK++KKE EAVTI+ETPP+VIVG+V YV+TPRGLRT +++A+H+S++ +RRFYK Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKY K+ GKK+++ MKKY ++RVIAHTQ+R + L+QKKAH Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 LME+QVNGGT+A+K+D+ + E++VPV VF +DEMID+IGVTKGKGY+GV +RW + Sbjct: 180 LMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQ-E 956 LPRKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG K G+ Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299 Query: 957 SHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 1136 + A T++D ++K I P+GGF HYG V D++M+KGC VG KKRV+TLR+SLL QT R A Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359 Query: 1137 LEDIKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 LE I LKFIDT+SKFGHGRFQT EEK+ F G LK Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>Q4R5Q0:RL3_MACFA 60S ribosomal protein L3 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 403 Score = 550 bits (1416), Expect = e-156 Identities = 266/394 (67%), Positives = 323/394 (81%), Gaps = 6/394 (1%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHGSLGFLPRKR SRHRGKVKSFPKDD KP HLTAFLGYKAGMTHIVREV Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK++KKE AVTI+ETPP+V+VG+V YV+TPRGLRT +V+A+H+S++ +RRFYK Sbjct: 61 DRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKY K+ + GKK+++ MKKY ++RVIAHTQ+R + L+QKKAH Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 LMEIQVNGGT+A+K+D+ + E++VPV VF +DEMID+IGVTKGKGY+GV +RW + Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQ-E 956 LPRKTHRGLRKVACIGA HPARV+++VARAGQ GYHHRTE+NKK+YKIG K G+ Sbjct: 240 LPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299 Query: 957 SHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 1136 + A T++D ++K I P+GGF HYG V D++M+KGC VG KKRV+TLR+SLL QT R A Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359 Query: 1137 LEDIKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 LE I LKFIDT+SKFGHGRFQT EEK+ F G LK Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>P49149:RL3_TOXCA 60S ribosomal protein L3 - Toxocara canis (Canine roundworm)| Length = 402 Score = 545 bits (1403), Expect = e-154 Identities = 257/391 (65%), Positives = 315/391 (80%), Gaps = 3/391 (0%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHGS+GF P+KR RHRGKVK+FPKDD KP HLTAF+ +KAGMTHIVREV Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 +KPGSK++KKE EAVTI E PP+VIVG+V Y+ TPRG R +VWA+HLSED R RFYK Sbjct: 61 DKPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW SKKKAF K+A K+ + G+K I+ L KMKKY + +RVIAHTQ++ MK ++KKAH Sbjct: 121 NWHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKIRVIAHTQMKVMKH-REKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 +MEIQ+NGGT+A+KVD+ + EK+VPV++VF +DEMID IGVTKGKG++GV +RW + Sbjct: 180 IMEIQINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKS---GQESHE 965 LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE+NKK+Y++GKS + Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKN 299 Query: 966 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALED 1145 T++D TEK + PMGGFPHYG+V D++MI+GCCVG KKR +TLR+SL+ QT R A E Sbjct: 300 GGTDYDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEK 359 Query: 1146 IKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 I LK+IDTSSKFGHGRFQT EK+ F GKLK Sbjct: 360 INLKWIDTSSKFGHGRFQTHAEKRAFMGKLK 390
>Q8NKF4:RL3_ASPFU 60S ribosomal protein L3 - Aspergillus fumigatus (Sartorya fumigata)| Length = 392 Score = 543 bits (1399), Expect = e-154 Identities = 260/388 (67%), Positives = 319/388 (82%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRK+E PRHGSL FLPRKR +RHRGKVKSFPKDD +KP HLTA +GYKAGMT +VR++ Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PG+K+HKKE EAVTIIETPPLV VG+V Y++TPRGLR+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKYA K+ + G I +LE++KKY T+VRV+AHTQIRK LKQKKAH Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 LMEIQVNGG++ADKVD+ FEK + ++++F+KDEMID+I VTKG G++GV +RWG + Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N KV++IGK G + A T Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGK-GSDEGNAST 297 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 +FD ++K ITPMGGF YG VK DY+M+KG G KKRV+TLR++L QTSR A E ++L Sbjct: 298 DFDISKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVEL 357 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 K+IDTSSKFGHG FQT EEK+ F G LK Sbjct: 358 KWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
>P36584:RL3B_SCHPO 60S ribosomal protein L3-B - Schizosaccharomyces pombe (Fission| yeast) Length = 388 Score = 543 bits (1399), Expect = e-154 Identities = 262/388 (67%), Positives = 318/388 (81%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSH KFE PRHGSLGFLPRKR SR RGKVK+FPKDD KP HLTAFLGYKAGMTHIVR++ Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK+HK+E EAVTIIETPP+V+VG+V YV+TPRGLR+L +VWA+HLSE+V+RRFYK Sbjct: 61 DRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKYA KY + I +LE++KKY ++VRV+AHTQIRK L QKKAH Sbjct: 121 NWFKSKKKAFTKYAKKYAEST--QSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 LMEIQVNGG++ADKV++ + FEK V +++ F+++EMID+IGVT+GKG EG RWG R Sbjct: 178 LMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKR 237 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N K+Y+IG +G ++ A T Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNAST 296 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 +FD TEK ITPMGGF YGVV+ D++M+ G GP KRV+TLR+SLL TSR ALE + L Sbjct: 297 DFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSL 356 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 K+IDT+SKFGHGRFQT E ++F G LK Sbjct: 357 KWIDTASKFGHGRFQTPAEAKQFLGTLK 384
>P40372:RL3A_SCHPO 60S ribosomal protein L3-A - Schizosaccharomyces pombe (Fission| yeast) Length = 388 Score = 543 bits (1398), Expect = e-154 Identities = 261/388 (67%), Positives = 318/388 (81%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSH KFE PRHGSLGFLPRKR SR RGKVK+FPKDD KP HLTAFLGYKAGMTHIVR++ Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK+HK+E EAVT+IETPP+V+VG+V YV+TPRGLR+L +VWA+HLSE+V+RRFYK Sbjct: 61 DRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKYA KY + I +LE++KKY ++VRV+AHTQIRK L QKKAH Sbjct: 121 NWFKSKKKAFTKYAKKYAEST--QSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 LMEIQVNGG++ADKV++ + FEK V +++ F+++EMID+IGVT+GKG EG RWG R Sbjct: 178 LMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKR 237 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N K+Y+IG +G ++ A T Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNAST 296 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 +FD TEK ITPMGGF YGVV+ D++M+ G GP KRV+TLR+SLL TSR ALE + L Sbjct: 297 DFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSL 356 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 K+IDT+SKFGHGRFQT E ++F G LK Sbjct: 357 KWIDTASKFGHGRFQTPAEAKQFLGTLK 384
>O16797:RL3_DROME 60S ribosomal protein L3 - Drosophila melanogaster (Fruit fly)| Length = 416 Score = 540 bits (1392), Expect = e-153 Identities = 258/394 (65%), Positives = 313/394 (79%), Gaps = 6/394 (1%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHGS+ F P+KR +RHRGKVK+FPKDD KP HLT F+GYKAGMTHIVRE Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK++KKE EAVT++ETPP+++VG V Y++TP GLR L +VWAQHLSE+ RRRFYK Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTK + K+ D GKK I+ KM +Y ++RVIAH+QIR +K +QKKAH Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 +MEIQ+NGG+I DKV + + EK + V VF +DEMID +GVTKGKG++GV +RW + Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE- 956 LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y+IG K G+ Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVI 299 Query: 957 SHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 1136 + A TE+D T+K ITPMGGFPHYG V D++MIKGCC+G KKR++TLR+SLLK T R A Sbjct: 300 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSA 359 Query: 1137 LEDIKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 LE IKLKFIDTSSK GHGRFQT +K F G LK Sbjct: 360 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
>P59671:RL3_NEUCR 60S ribosomal protein L3 - Neurospora crassa| Length = 392 Score = 533 bits (1374), Expect = e-151 Identities = 253/388 (65%), Positives = 316/388 (81%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRK+E PRHGSL +LPRKR +RHRGKVKSFPKDD +KP HLTA +GYKAGMT IVR++ Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PG+K HKKE EAVTII+TPP+++VGLV Y++TPRGLR+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKY K+ SD I +LE++KKY T+VRV+AHTQIRK LKQKKAH Sbjct: 121 NWYKSKKKAFTKYVKKH-SDNNGAAITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 LMEIQ+NGG++ADKV++G+ FEK V ++++F+KDE+ID+I VTKG G+ GV RWG + Sbjct: 179 LMEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKK 238 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y+IGK G A T Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGK-GDAEDSAAT 297 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 E D T+K ITPMGGF YG + D++M+KG G KKRV+TLR+S+ TSR ALE ++L Sbjct: 298 EVDVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVEL 357 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 K+IDTSS+FGHG FQT EK++F G LK Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQFQGTLK 385
>P34113:RL3_DICDI 60S ribosomal protein L3 - Dictyostelium discoideum (Slime mold)| Length = 398 Score = 531 bits (1368), Expect = e-150 Identities = 255/394 (64%), Positives = 317/394 (80%), Gaps = 5/394 (1%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKFE PRHG+LGF PRKR +RH+GKVKSFPKDD+ + HLTAF+GYKAGMTH+VR++ Sbjct: 1 MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDL 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 EKPGSK+HKKE EAVTIIE PP+ IVGLV YV+T +GL+T +VWAQHLS++ RRR YK Sbjct: 61 EKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYK 120 Query: 435 NWCKSK-KKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKA 611 NW KSK KKAFTKY +Y+++ GKK I+ L+ +KK ++VRVIAHTQ+ K+K L QKKA Sbjct: 121 NWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLK-LTQKKA 179 Query: 612 HLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 791 H++EIQVNGG+I +KV++ FEK V V VF ++E+ID+IGVTKGKG+ GV+ RWGV Sbjct: 180 HVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVR 239 Query: 792 RLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKS----GQES 959 +LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKK+Y+IG++ G++ Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQI 299 Query: 960 HEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 1139 TEFD TEK I PMGGF HYG+VK ++LM+KGC GP+KR +TLR+S+ QT R AL Sbjct: 300 STGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAAL 359 Query: 1140 EDIKLKFIDTSSKFGHGRFQTTEEKQRFYGKLKA 1241 E I LKFIDTSSKFGHG QT E+K +++G K+ Sbjct: 360 EKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKS 393
>P50880:RL3_CAEEL 60S ribosomal protein L3 - Caenorhabditis elegans| Length = 401 Score = 530 bits (1364), Expect = e-150 Identities = 249/391 (63%), Positives = 313/391 (80%), Gaps = 3/391 (0%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHG +GF P+KR +RG++K+FPKDD+ KP HLTAFLGYKAGMTHIVR+V Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 +KPGSK++KKE EAVTI+ETPP+VI G+ YV TP+G R L ++WA+HLSE+ RRRFY Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKYA K+ + GKK I+ K+KKY + +RVIAHTQ++ ++ +QKKAH Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 L+EIQVNGGTI KVD+ + EK+V V+ VF +DEMID IGVT+G G++GV +RW + Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSG---QESHE 965 LPRKTH+GLRKVACIGAWHP+RV++TVARAGQ G+HHRT +N K+Y+IGKS + + Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 299 Query: 966 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALED 1145 TEFD T+K ITPMGGFP YG+V DY+M++G +GPKKR++TLR+SL+ QT R+A E Sbjct: 300 GSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 359 Query: 1146 IKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 I LK+IDTSSK GHGRFQTT EK+ F GKLK Sbjct: 360 INLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
>Q6BXM5:RL3_DEBHA 60S ribosomal protein L3 - Debaryomyces hansenii (Yeast) (Torulaspora| hansenii) Length = 389 Score = 528 bits (1361), Expect = e-149 Identities = 253/388 (65%), Positives = 315/388 (81%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRK+E PRHGSLGFLPRKR + RG+VKSFPKD + KP LTAFLGYKAGMT +VR++ Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDL 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK+HK+E EA T+++TPPLV+VG+V YV+TPRGLR+L +VWA+HLSE+VRRRFYK Sbjct: 61 DRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKY+ KY D +++ +L ++KKYA++VRV+AHTQI+K L QKKAH Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--QVERELARIKKYASVVRVLAHTQIKKTP-LAQKKAH 177 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 L EIQVNGG+++DKVD+ + FEK V V++VF+KDEM+D+ VTKG G+EGV RWG + Sbjct: 178 LAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKK 237 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N KVY++G +G ES A T Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDESSGA-T 296 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 EFDRT+K I PMGGF YG VK D++++KG G KKR+VT+R+SL TSR A E++ L Sbjct: 297 EFDRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNL 356 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 K+IDT+SKFG GRFQT EK F G LK Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFLGTLK 384
>Q9NBK4:RL3_CAEBR 60S ribosomal protein L3 - Caenorhabditis briggsae| Length = 401 Score = 525 bits (1352), Expect = e-148 Identities = 246/391 (62%), Positives = 311/391 (79%), Gaps = 3/391 (0%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHG +GF P+KR +RG++K+FPKDD KP HLTAFLGYKAGMTHIVR+V Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 +KPGSK++KKE EAV+IIETPP+VI G+ Y+ TP+G R L ++WA+HLSE+ RRRFY Sbjct: 61 DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKYA K+ + GKK I+ K+KKY + +RVIAHTQ++ ++ +QKKAH Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 L+EIQ+NGGTI KVD+ + EK++ V+ VF +DEMID IGVTKG G++GV +RW + Sbjct: 180 LVEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSG---QESHE 965 LPRKTH+GLRKVACIGAWHP+RV++TVARAGQ G+HHRT +N K+Y+IGKS + + Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 299 Query: 966 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALED 1145 TEFD T+K I PMGGFP YG+V DY+M++G +GPKKR++TLR+SL+ QT R+A E Sbjct: 300 GSTEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEK 359 Query: 1146 IKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 I LK+IDTSSK GHGRFQTT EK+ F GKLK Sbjct: 360 INLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
>Q6CJR7:RL3_KLULA 60S ribosomal protein L3 - Kluyveromyces lactis (Yeast) (Candida| sphaerica) Length = 387 Score = 523 bits (1348), Expect = e-148 Identities = 247/388 (63%), Positives = 314/388 (80%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRK+E PRHG LGFLPRKR + RG+VKSFPKDDQ KP LT+FLGYKAGM+ IVR++ Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK HK+E EAVT+++TPP+V+VG+V YV+TPRGLR+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKY+ KY + ++ +L ++KKYA++VRV+ HTQ+RK L QKKAH Sbjct: 121 NWYKSKKKAFTKYSAKYAENGA--QVDRELARIKKYASVVRVLVHTQVRKTP-LSQKKAH 177 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 L EIQ+NGG+++DKVD+ + FEK V V++VF+++EMID++ VTKG G+EGV RWG + Sbjct: 178 LAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KVY++GK G + A T Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGK-GDDEANAAT 296 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 EFDRT+K ITPMGGF HYG + D++++KG G +KRVVTLR+SL TSR ALE++ L Sbjct: 297 EFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTL 356 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 K+IDT+SKFG GRFQT EK F G LK Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFLGTLK 384
>Q6FTJ2:RL3_CANGA 60S ribosomal protein L3 - Candida glabrata (Yeast) (Torulopsis| glabrata) Length = 387 Score = 522 bits (1344), Expect = e-147 Identities = 251/388 (64%), Positives = 313/388 (80%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRK+E PRHG LGFLPRKR + RG+VKSFPKDD+ KP LT+FLGYKAGMT IVR++ Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK HK+E EAVT+++TPP+V+VG+V YV+TPRGLR+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKY+ KY + EI+ +L ++KKYAT+VRV+ HTQ+RK L QKKAH Sbjct: 121 NWYKSKKKAFTKYSAKYAQNGA--EIERELARIKKYATVVRVLVHTQVRKTP-LVQKKAH 177 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 L EIQ+NGG+I++KVD+ + FEK V V++VF+++EMID I VTKG G+EGV RWG + Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y+IGK G + A T Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGK-GDDEGNAAT 296 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 FDRT+K I PMGGF HYG+V D++M+KG G KKRVVTLR+SL TSR A+E++ L Sbjct: 297 NFDRTKKTINPMGGFVHYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTL 356 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 K+IDT+SKFG GRFQT EK F G LK Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>P14126:RL3_YEAST 60S ribosomal protein L3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 387 Score = 520 bits (1338), Expect = e-147 Identities = 248/388 (63%), Positives = 313/388 (80%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRK+E PRHG LGFLPRKR + R +VK+FPKDD+ KP LT+FLGYKAGMT IVR++ Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK HK+E EAVT+++TPP+V+VG+V YV+TPRGLR+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFTKY+ KY D I+ +L ++KKYA++VRV+ HTQIRK L QKKAH Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAH 177 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 L EIQ+NGG+I++KVD+ + FEK V V++VF+++EMID I VTKG G+EGV RWG + Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GK E++ A T Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-T 296 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 FDRT+K ITPMGGF HYG +K D++M+KGC G +KR+VTLR+SL TSR ALE++ L Sbjct: 297 SFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSL 356 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 K+IDT+SKFG GRFQT EK F G LK Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>Q759R7:RL3_ASHGO 60S ribosomal protein L3 - Ashbya gossypii (Yeast) (Eremothecium| gossypii) Length = 388 Score = 519 bits (1336), Expect = e-146 Identities = 248/388 (63%), Positives = 314/388 (80%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRK+E PRHG LGFLPRKR + RG+VK+FPKDD+ KP LT+FLGYKAGMT IVR++ Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 ++PGSK HK+E EAV++++TPP+V+VG+V Y++TPRGLR+L +VWA+HLS++++RRFYK Sbjct: 61 DRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 NW KSKKKAFT+ + G I+ +L ++KKYA++VRV+AHTQ+RK L QKKAH Sbjct: 121 NWYKSKKKAFTQVPPPSTAQDG-AAIERELARIKKYASVVRVLAHTQVRKTP-LVQKKAH 178 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 L EIQ+NGG++++KVD+ + FEK V V++VF+++EMID+I VTKG G+EGV RWG + Sbjct: 179 LAEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKK 238 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KVY+IGK G E + A T Sbjct: 239 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGN-AAT 297 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 EFDRT+K ITPMGGF HYG V D++M+KG G +KRVVTLR+SL TSR ALE++ L Sbjct: 298 EFDRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNL 357 Query: 1155 KFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 K+IDT+SKFG GRFQT EK F G LK Sbjct: 358 KWIDTASKFGKGRFQTPAEKHAFMGTLK 385
>Q3SZ10:RL3L_BOVIN 60S ribosomal protein L3-like - Bos taurus (Bovine)| Length = 407 Score = 509 bits (1312), Expect = e-144 Identities = 241/394 (61%), Positives = 306/394 (77%), Gaps = 6/394 (1%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHG LGFLP KR RHRGKVK++P+DD +P HLTAFLGYKAGMTH +REV Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 +PG K+ K+E EAVTI+ETPPLV+VG+V YV TPRGLR+ +++A+HLS++ RRRFYK Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 +W KSKKKAFTK ++ GKK++Q MKKY ++RVI HTQ+ K+ +QKKAH Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 +ME+Q+NGGT+A+KV + EK+VPV +VF ++E+ID+I VTKG+G +GV +RW + Sbjct: 180 IMEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK------SGQE 956 LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y+IG+ Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVV 299 Query: 957 SHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 1136 + A T +D T+K ITP+GGFPHYG V D++M+KGC G KKRV+TLR+SLL SR A Sbjct: 300 KNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359 Query: 1137 LEDIKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 LE+I+LKFIDT+SKFGHGRFQT +EK+ F G K Sbjct: 360 LENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
>Q92901:RL3L_HUMAN 60S ribosomal protein L3-like - Homo sapiens (Human)| Length = 407 Score = 507 bits (1305), Expect = e-143 Identities = 240/394 (60%), Positives = 304/394 (77%), Gaps = 6/394 (1%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 MSHRKF PRHG LGFLP KR RHRGKVK++P+DD +P HLTAFLGYKAGMTH +REV Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 +PG K+ K+E EAVTI+ETPPLV+VG+V YV TPRGLR+ +++A+HLS++ RRRFYK Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 +W KSKKKAFTK ++ GKK++Q MKKY ++RVI HTQ+ K+ +QKKAH Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 +MEIQ+NGGT+A+KV + EK+VPV +VF + E+ID+I VTKG+G +GV +RW + Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239 Query: 795 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQ------E 956 LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+++IG+ Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLV 299 Query: 957 SHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLA 1136 + A T +D T K ITP+GGFPHYG V D++M+KGC G KKRV+TLR+SLL SR A Sbjct: 300 KNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359 Query: 1137 LEDIKLKFIDTSSKFGHGRFQTTEEKQRFYGKLK 1238 +E+I+LKFIDT+SKFGHGRFQT +EK+ F G K Sbjct: 360 VENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
>Q8SQI3:RL3_ENCCU 60S ribosomal protein L3 - Encephalitozoon cuniculi| Length = 383 Score = 385 bits (988), Expect = e-106 Identities = 205/398 (51%), Positives = 271/398 (68%), Gaps = 3/398 (0%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVR-E 251 MS RKF PRHGSL F PRKR R +FP DD+ +P HLT F+ YKAGMTH+VR + Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60 Query: 252 VEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFY 431 + +K +E +AVT++E PP+V+ G+V Y KT GLR L V A ++S+ V RR + Sbjct: 61 TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120 Query: 432 KNWCKSKKKA--FTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQK 605 N SK+ A F K ++ + ++E +K+ A VRV+ TQ +KGL K Sbjct: 121 GNRYASKESAGQFCKGSV----------CESRVEMIKERAHCVRVLVQTQPTLIKGLGLK 170 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWG 785 KAH+ EIQVNGG+I++KV++ EKE+ + VF +E ID IGVTKGKG++G V R+G Sbjct: 171 KAHIAEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFG 230 Query: 786 VTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHE 965 V + PRK+ +G+RKVACIGAWHP+RV Y++ARAGQ G+H RTE NK+VY IG S Sbjct: 231 VRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNG---SSN 287 Query: 966 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALED 1145 TEFD TEK I+PMGGFPHYG V+ D++M+KG VG +KRVVTLR+SLL+Q A E+ Sbjct: 288 IKTEFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEE 344 Query: 1146 IKLKFIDTSSKFGHGRFQTTEEKQRFYGKLKA*AATDL 1259 + +KF+DTSSK GHGRFQT+ EK+ FYG KA A ++ Sbjct: 345 LVIKFVDTSSKIGHGRFQTSAEKKAFYGARKADIAAEI 382
>O59418:RL3_PYRHO 50S ribosomal protein L3P - Pyrococcus horikoshii| Length = 362 Score = 229 bits (583), Expect = 3e-59 Identities = 139/373 (37%), Positives = 203/373 (54%), Gaps = 9/373 (2%) Frame = +3 Query: 87 KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 266 K PR GSL F PRKR +++S+PK+ + + + F GYKAGMTHI+ ++PG Sbjct: 3 KIHRPRKGSLAFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59 Query: 267 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 446 + KE VTIIETPPL + G+ AY + GL T V + D Y K Sbjct: 60 LT-NGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETAGEV----IVPDFELDNYTPSKK 114 Query: 447 SKKKAFTKYAL------KYDSDAGKKEIQLQL---EKMKKYATIVRVIAHTQIRKMKGLK 599 K + FT Y D ++E + +L E M K IV V A + Sbjct: 115 GKGRKFTFYQFLGRRIATLPKDYTQEEFEQKLGALEDMIKEGEIVEVRALVSTQPWVIKL 174 Query: 600 QKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTR 779 +KK +ME + G ++ +K +Y + KE+ V V ++ E++D+I VTKGKG +G V R Sbjct: 175 KKKPEVMEYAIGGTSVEEKFNYIKEKLGKEIRVGEVLKEGELLDVIAVTKGKGTQGPVKR 234 Query: 780 WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQES 959 WG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ IG++G+ Sbjct: 235 WGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK-- 292 Query: 960 HEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 1139 D E +ITP GGFPHYG+V+GD++MI G G KR++ +R ++ + + Sbjct: 293 ----LVIDGNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPV 348 Query: 1140 EDIKLKFIDTSSK 1178 + ++ ++ SK Sbjct: 349 QRPQITYVSVESK 361
>Q9V1T5:RL3_PYRAB 50S ribosomal protein L3P - Pyrococcus abyssi| Length = 361 Score = 225 bits (574), Expect = 3e-58 Identities = 139/376 (36%), Positives = 204/376 (54%), Gaps = 12/376 (3%) Frame = +3 Query: 87 KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 266 K PR GSL F PRKR +++S+PK+ + + + F GYKAGMTHI+ ++PG Sbjct: 3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59 Query: 267 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWC- 443 + KE VTIIETPPL + G+ AY + GL T V D N+ Sbjct: 60 LT-NGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELD-------NYVS 111 Query: 444 -KSKKKAFTKYAL----------KYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMK 590 K+K + FT Y L Y D ++++ LE M K IV V A + Sbjct: 112 KKAKGRKFTFYQLLKRRIATLPKNYTKDDFEQKLG-NLEDMIKEGEIVEVRALVATQPWV 170 Query: 591 GLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGV 770 +KK +ME + G ++ +K +Y + KE+ V V ++ E++D+I VTKGKG +G Sbjct: 171 IKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGP 230 Query: 771 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSG 950 V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ IG++G Sbjct: 231 VKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENG 290 Query: 951 QESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSR 1130 + D E +ITP GGFPHYG+V+ D++MI G G KR++ +R ++ + Sbjct: 291 K------LVIDGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKK 344 Query: 1131 LALEDIKLKFIDTSSK 1178 ++ ++ ++ SK Sbjct: 345 PPVQRPQITYVSVESK 360
>Q5JDJ0:RL3_PYRKO 50S ribosomal protein L3P - Pyrococcus kodakaraensis (Thermococcus| kodakaraensis) Length = 346 Score = 225 bits (573), Expect = 4e-58 Identities = 140/368 (38%), Positives = 201/368 (54%), Gaps = 4/368 (1%) Frame = +3 Query: 87 KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 266 K PR GSL + PRKR +++S+PKD + + + F GYKAGMTHI+ + PG Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRSWPKDSEVR---MLGFAGYKAGMTHILMIDDSPG 59 Query: 267 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 446 KE VTI+E PPL + G+ AY + GL T VW L ++V RR Sbjct: 60 LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARRI------ 112 Query: 447 SKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATI--VRVIAHTQIRKMKGLKQKKAHLM 620 K K Y+ +A + ++ QLE + I VR++ HTQ + GLK KK +M Sbjct: 113 ---KTLPK---NYNEEAFQAKLG-QLEDLVNDGEIADVRLLVHTQ-PWLIGLK-KKPEVM 163 Query: 621 EIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 800 E + G + K DY + KE+ V + E++D+I VTKGKG +G V RWGV Sbjct: 164 EYAIGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQF 223 Query: 801 RKTHRGL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 K R R + +G WHPARV +TV +AGQ G+HHRTE NK++ IG++G+ Sbjct: 224 HKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK------L 277 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 D E +ITP GGFPHYG+V+ D+LMI+G G KR++ +R ++ + +E ++ Sbjct: 278 VLDGNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPPVERPQI 337 Query: 1155 KFIDTSSK 1178 ++ SK Sbjct: 338 TYVSRESK 345
>Q8TZZ8:RL3_PYRFU 50S ribosomal protein L3P - Pyrococcus furiosus| Length = 365 Score = 224 bits (572), Expect = 5e-58 Identities = 137/371 (36%), Positives = 199/371 (53%), Gaps = 7/371 (1%) Frame = +3 Query: 87 KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 266 K PR GSLGF PRKR +++S+PK+ + + + F GYKAGMTHI+ ++PG Sbjct: 3 KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59 Query: 267 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 446 + KE VTIIETPPL + G+ AY GL T V D + Sbjct: 60 LT-NGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKP 118 Query: 447 SKKKAFTKYALKYDSDAGKKEIQL-------QLEKMKKYATIVRVIAHTQIRKMKGLKQK 605 K F K + + K Q QLE M K IV V A + +K Sbjct: 119 KPKMTFYKLLERRIATLPKNYTQEMFEQKLGQLEDMIKEGEIVDVRAIVATQPWVIKLKK 178 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWG 785 K +ME + G ++ +K +Y + KE+ V V ++ E++D+I VTKGKG +G V RWG Sbjct: 179 KPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWG 238 Query: 786 VTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHE 965 + K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ IG++G+ + Sbjct: 239 IKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLKLD 298 Query: 966 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALED 1145 + TE +ITP GGFPHYG+V+ D++MI G G KR++ +R ++ + ++ Sbjct: 299 -----ENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQR 353 Query: 1146 IKLKFIDTSSK 1178 ++ ++ SK Sbjct: 354 PQITYVSVESK 364
>O26110:RL3_METTH 50S ribosomal protein L3P - Methanobacterium thermoautotrophicum| Length = 337 Score = 223 bits (569), Expect = 1e-57 Identities = 137/369 (37%), Positives = 197/369 (53%), Gaps = 3/369 (0%) Frame = +3 Query: 87 KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 266 + PR GS+ F PRKR +R +VKS+P+ D+ L A GYKAGMTH++ + Sbjct: 3 RHHQPRKGSVAFSPRKRAARETPRVKSWPQVDEPG---LLALAGYKAGMTHVMMVDNQKN 59 Query: 267 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 446 S E VTI+E PPL ++ + Y KT RGL+TL V A +D+RR+ Sbjct: 60 SPTEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRK------- 112 Query: 447 SKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEI 626 T A YD +A ++I+ +E Y VRVI HT R + + +KK + E Sbjct: 113 -----LTPPADDYDQEAAIEKIRSNME----YVADVRVIVHTNPR-LASVPKKKPEVFEC 162 Query: 627 QVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 806 + G T +K +Y + K+V +F + +D I VTKGKG++G V RWG+ K Sbjct: 163 GLGGKTPEEKFEYALEILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGK 222 Query: 807 THRGL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEF 980 R R + +G W P+R +TV +AGQ GYH RTE NK++ KIG Sbjct: 223 AARSSKGRHIGSLGPWTPSRTMWTVPQAGQMGYHRRTEYNKQILKIG------------- 269 Query: 981 DRTEKD-ITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLK 1157 D +E D + P GGF YG+V+ DY+MIKG GP KR+V LR+++ + + E ++ Sbjct: 270 DASEADLVNPDGGFVRYGLVRNDYVMIKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQIN 327 Query: 1158 FIDTSSKFG 1184 +I T+SK G Sbjct: 328 YISTASKQG 336
>Q6LX10:RL3_METMP 50S ribosomal protein L3P - Methanococcus maripaludis| Length = 334 Score = 221 bits (563), Expect = 6e-57 Identities = 135/369 (36%), Positives = 193/369 (52%), Gaps = 2/369 (0%) Frame = +3 Query: 87 KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 266 K PR GSL F PRKR + K++S+P D K L AF YKAG TH + P Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60 Query: 267 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 446 S +E VT++ETP + + G+ Y KT +GL+ L VWA+ L D+ R Sbjct: 61 SPNSSQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDSDLGR-------- 112 Query: 447 SKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEI 626 K K K DA L+ + + AT VR I HT K G+ +KK ++EI Sbjct: 113 --KLTLAKKEEKKTVDA--------LDAVLEKATEVRAIVHTN-PKTTGIPKKKPEVVEI 161 Query: 627 QVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 803 ++ G ++A+++ Y + K + + VF+ E+ID + +TKGKG++G V RWG+ + + Sbjct: 162 RIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221 Query: 804 KTHRGL-RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEF 980 +G+ R IG W P RV +TV GQ G+H RTE NK++ K+G G E Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE-------- 273 Query: 981 DRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKF 1160 ITP GGF +YG VK Y+++KG GP KR+V LR S+ + L +I + Sbjct: 274 ------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEI--AY 325 Query: 1161 IDTSSKFGH 1187 I T SK G+ Sbjct: 326 ISTESKQGN 334
>P54014:RL3_METJA 50S ribosomal protein L3P - Methanococcus jannaschii| Length = 335 Score = 219 bits (559), Expect = 2e-56 Identities = 130/365 (35%), Positives = 202/365 (55%), Gaps = 3/365 (0%) Frame = +3 Query: 99 PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 278 PR GSL F PRKR R +++S+P++D + L AF YKAGM+H + + P S Sbjct: 8 PRRGSLAFSPRKRAKRPVPRIRSWPEEDTVR---LQAFPVYKAGMSHAFIKEDNPKSPNA 64 Query: 279 KKETCEAVTIIETPPLVIVGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRRFYKNWCKSKK 455 +E +TI+E PP+ + + Y + R L TL VWA +L +++ R+ Sbjct: 65 GQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERK---------- 114 Query: 456 KAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVN 635 +K +K ++ LE +K VRV+ HT K+ L +KK ++EI++ Sbjct: 115 -------IKLPKKEDRKTVE-DLEALKDKIEDVRVLVHTN-PKLTCLPKKKPEILEIRIG 165 Query: 636 GGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTH 812 G I ++++Y + K++ + VFQ+ E++D IGVTKGKG++G V RWGV + + Sbjct: 166 GKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHAR 225 Query: 813 RGL-RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRT 989 +G+ R V IG W P V ++V GQ GYH RTE NK++ KIG +G E Sbjct: 226 KGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE----------- 274 Query: 990 EKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFIDT 1169 ITP GGF HYGV++ +Y+++KG GP KR++ LR+++ Q + + +I +I T Sbjct: 275 ---ITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TYIST 329 Query: 1170 SSKFG 1184 +SK G Sbjct: 330 TSKQG 334
>Q8TY90:RL3_METKA 50S ribosomal protein L3P - Methanopyrus kandleri| Length = 361 Score = 219 bits (558), Expect = 2e-56 Identities = 126/342 (36%), Positives = 195/342 (57%), Gaps = 4/342 (1%) Frame = +3 Query: 99 PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 278 PR GSL F PRKR SR +++S+P +++ + + F GYKAGMTH + + P S Sbjct: 12 PRRGSLAFSPRKRASRPVPRIRSWPDEERVR---VQGFAGYKAGMTHAIMIDDWPNSPTE 68 Query: 279 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 458 +E VTI++ PP+ + + AY TP G R + WA+ + E++ + Sbjct: 69 GEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAE-IPEELEM----------DR 117 Query: 459 AFTKYALKYDSDAGKKEIQLQLEKMKKYATI--VRVIAHTQIRKMKGLKQKKAHLMEIQV 632 FT + D +AG + ++E++ + +RVI TQ +K G+ +KK +ME ++ Sbjct: 118 VFT---VPKDGEAGDLD---KIEELVDEGIVEEIRVIVATQPKKA-GVPKKKPDVMEYRI 170 Query: 633 NGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 812 G + ++ +Y + +E+ + VF + E++D+ +TKGKG++GVV RWGVT RKT Sbjct: 171 GGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGVTIQDRKTQ 230 Query: 813 RGL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDR 986 R R + IG P+RV +TV AGQ GYH RTE NK++ KIG+ G+E Sbjct: 231 RKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE---------- 280 Query: 987 TEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSL 1112 +TP GGF +YGVV+GDY+MI G GPKKR++ +R ++ Sbjct: 281 ----VTPRGGFVNYGVVRGDYIMIHGTVPGPKKRLIRVRPAV 318
>O28354:RL3_ARCFU 50S ribosomal protein L3P - Archaeoglobus fulgidus| Length = 331 Score = 218 bits (554), Expect = 6e-56 Identities = 126/370 (34%), Positives = 203/370 (54%), Gaps = 4/370 (1%) Frame = +3 Query: 87 KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 266 K+ PR GSL F PRKR +++++P+ D+ + + F GYKAGMTH+V ++ Sbjct: 2 KYHRPRRGSLAFSPRKRAKSIVPRIRAWPECDRVR---MQGFAGYKAGMTHVVMIDDRKN 58 Query: 267 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 446 S + +E VT+IETPP+ + + Y KT G++ VW+ +L + + RR Sbjct: 59 SPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRRL------ 112 Query: 447 SKKKAFTKYALKYDSDAGKKEIQLQLEK--MKKYATIVRVIAHTQIRKMKGLKQKKAHLM 620 + KKE ++ K ++ A+ VRV+ +TQ + G+ +K +M Sbjct: 113 ---------------NLPKKEPDVEKLKAAVENGASEVRVVTYTQPYLITGVPKKVPDVM 157 Query: 621 EIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 800 E ++ GG + + +DY KE+ V VF + +ID+I VTKGKG++G V RWGV L Sbjct: 158 EHRI-GGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLD 216 Query: 801 RKTHRGL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 K R R+V +G W+P V +TV +AGQ G+H RTE NK++ KIG++G+E Sbjct: 217 AKHARSSKHRRVGNLGPWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE------ 270 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 ITP GGF HYGV++ Y+++ G GP KR++ +R ++ + + + + + Sbjct: 271 --------ITPKGGFLHYGVIRTQYVLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNI 320 Query: 1155 KFIDTSSKFG 1184 ++ T+SK G Sbjct: 321 VYVSTTSKQG 330
>Q9UWG2:RL3_METVA 50S ribosomal protein L3P - Methanococcus vannielii| Length = 334 Score = 216 bits (551), Expect = 1e-55 Identities = 135/371 (36%), Positives = 196/371 (52%), Gaps = 4/371 (1%) Frame = +3 Query: 87 KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 266 K PR GSL F PRKR + K++S+P D K L AF YKAG TH + P Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPK 60 Query: 267 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 446 S + +E VT++ETP + + G+ AY KT +GL+ L VWA+ +++ R Sbjct: 61 SPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGR-------- 112 Query: 447 SKKKAFTKYALKYDSDAGKKEIQL--QLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLM 620 K TK K+EI+ L+ + + +RVI HT K G+ +KK ++ Sbjct: 113 --KLTVTK----------KEEIKTVESLDAVLEKTVDLRVIVHTN-PKTTGIPKKKPEVV 159 Query: 621 EIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRL 797 EI+V G ++A+K+ Y K + + VF+ E ID + VTKGKG++G V RWGV + Sbjct: 160 EIRVGGSSVAEKLAYAKDILGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQF 219 Query: 798 PRKTHRGL-RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 974 + +G+ R+ IG W P RV +TV AGQ G+H RTE NK++ K+G G E Sbjct: 220 GKHQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE------ 273 Query: 975 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 ITP GGF +YG VK Y+++KG GP KR+V LR ++ + L ++ Sbjct: 274 --------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPEV-- 323 Query: 1155 KFIDTSSKFGH 1187 +I SK G+ Sbjct: 324 TYISKESKQGN 334
>Q2NFV6:RL3_METST 50S ribosomal protein L3P - Methanosphaera stadtmanae (strain DSM| 3091) Length = 337 Score = 211 bits (538), Expect = 5e-54 Identities = 136/369 (36%), Positives = 198/369 (53%), Gaps = 3/369 (0%) Frame = +3 Query: 87 KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 266 + PR GS+ F PRKR +R +V ++P+ D+ L AF GYK GMTH+ + G Sbjct: 3 RHHQPRKGSVAFSPRKRVARETPRVSTWPELDE---AGLLAFAGYKVGMTHVTALDSRKG 59 Query: 267 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 446 S E VTI+E PPLV++G+ AY KT GL+TL V A +D Sbjct: 60 SPTENMELSVPVTILEAPPLVVLGIRAYTKTTYGLKTLTDVIANDNLDDE---------L 110 Query: 447 SKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEI 626 S+K + K+ D +A +E++ +++ + + +RV+ HT+ K+ + +KK ++E Sbjct: 111 SRKISVPKFD---DIEAKIEELRNKIDDIDE----IRVLIHTK-PKLTSVPKKKPEVLEF 162 Query: 627 QVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 806 + G ++ DK++Y KE+ + VFQ+ E D I TKGKG +G V R+GV K Sbjct: 163 GLGGKSVEDKLEYAISILGKEITPQDVFQEGEYTDAIATTKGKGVQGPVKRFGVRIQYGK 222 Query: 807 THRG--LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEF 980 R R V IG W P R +TVA GQ GYH RTE NKK+ KIG Sbjct: 223 AARSGIERHVGSIGPWTPNRTMWTVAMQGQMGYHKRTEYNKKLLKIG------------- 269 Query: 981 DRTEKD-ITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLK 1157 D +E D I P GGF YG VK +Y+++KG GP KR+V LR+ + + ++ +I Sbjct: 270 DESEVDLINPDGGFVKYGFVKNNYILVKGSLPGPSKRLVVLRKGVRNASKQVTAPEI--S 327 Query: 1158 FIDTSSKFG 1184 +I T+SK G Sbjct: 328 YISTTSKQG 336
>Q4JB40:RL3_SULAC 50S ribosomal protein L3P - Sulfolobus acidocaldarius| Length = 342 Score = 203 bits (517), Expect = 1e-51 Identities = 134/373 (35%), Positives = 203/373 (54%), Gaps = 3/373 (0%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 M HRK PR GS G PRKR K++P + ++P L F+GYKAGMTH+ Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEP-KLLGFIGYKAGMTHVYMID 59 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRRFY 431 +KP S + KE VTI+E+PP++ + L AY +G L L WA F Sbjct: 60 DKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWAN---------FE 110 Query: 432 KNWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKA 611 + K K+ T +LK DS K+++ L ++K T +R++ TQ + L +K+ Sbjct: 111 EGSLKYLKRKIT--SLKVDSSKMKEKLDL-IQKNLNNITYMRLLVSTQPWLVPSLGKKRP 167 Query: 612 HLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 791 ++EIQ+ GG+I D+++YG K++PV VF++ ++ DIIGVTKGKG++GV+ R+ V Sbjct: 168 EIVEIQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVV 227 Query: 792 RLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHE 965 PR K +G RK+ G + SY V + GQ G+H RTE NK++ KIG + E Sbjct: 228 EFPRWHKHRKGSRKIGARGP-SISTPSY-VPQPGQLGFHRRTEYNKRIIKIGDNVNE--- 282 Query: 966 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALED 1145 I P GG +YG+VK YL+I+G +G +KR + LR + S + Sbjct: 283 -----------INPAGGIVNYGLVKNTYLVIEGSVLGSRKRPLFLRYPIRPSWSPESAP- 330 Query: 1146 IKLKFIDTSSKFG 1184 K+ +++ +S+ G Sbjct: 331 -KITYVNLASQQG 342
>Q3IMY8:RL3_NATPD 50S ribosomal protein L3P - Natronomonas pharaonis (strain DSM 2160 /| ATCC 35678) Length = 336 Score = 201 bits (511), Expect = 6e-51 Identities = 125/367 (34%), Positives = 188/367 (51%), Gaps = 5/367 (1%) Frame = +3 Query: 99 PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 278 PR GS+GF PR R + + S+P D+ Q L F GYKAGM+H+V ++P S Sbjct: 7 PRKGSMGFSPRSRAASEVPRFNSWPDDEGQPG--LQGFAGYKAGMSHVVAINDEPNSPRE 64 Query: 279 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 458 +E VT++ETPP+ V + AY TP G R L VW + ED+ R Sbjct: 65 GQEETVPVTVVETPPMRAVAVRAYEDTPYGKRPLTEVWTDEVHEDLERSLSVP------- 117 Query: 459 AFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNG 638 + +G E ++ + VRVI HT + + +K+ +ME +V G Sbjct: 118 ---------EEQSGDIEGDIRTALDEGALADVRVITHTVPGALSSVPKKEPDVMETRVGG 168 Query: 639 GTIADKVDYGYKFFEK--EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 812 G+++D+VD+ + E V VF+ E D+ G+TKGKG +G V RWGV + K Sbjct: 169 GSLSDRVDFALDLVDDGGEHTVTDVFRAGEYTDVAGITKGKGTQGPVKRWGVQKRKGKHA 228 Query: 813 RG--LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDR 986 R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G Sbjct: 229 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDLG--------------- 273 Query: 987 TEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLK-QTSRLALEDIKLKFI 1163 + D++P GGF +YG V G Y ++KG GP KR+V R ++ RL D +++++ Sbjct: 274 -DDDVSPDGGFVNYGEVDGPYALVKGSVPGPDKRLVRFRPAVRPGDQPRL---DPEVRYV 329 Query: 1164 DTSSKFG 1184 T+S G Sbjct: 330 STASNQG 336
>Q9YFM2:RL3_AERPE 50S ribosomal protein L3P - Aeropyrum pernix| Length = 344 Score = 201 bits (510), Expect = 8e-51 Identities = 134/377 (35%), Positives = 198/377 (52%), Gaps = 7/377 (1%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 M RK PR GSLGF PRKR SR +VK +P+ D KP L AFLGY+AGMTH+ Sbjct: 1 MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTP-RGLRTLNSVWAQHLSE-DVRRRF 428 ++PG KE VTI+ETPP+ + + Y P RG +L WAQ E +++RR Sbjct: 60 DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRI 119 Query: 429 YKNWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKK 608 +D+D K ++ +L+K A VR+IA +Q + GL +KK Sbjct: 120 -------------STLGSFDTDKMLKSLEERLDK----AEDVRLIAASQPKLAGGLSKKK 162 Query: 609 AHLMEIQVNGGTIADKV-DYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWG 785 L+EI+V G + K+ DY + V VF++ +++D+I VTKGKG++GV+ RWG Sbjct: 163 PDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWG 222 Query: 786 VTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQES 959 V LPR K +G R++ H + +AGQ G+H RTE NK++ I G + Sbjct: 223 VKELPRWHKHRKGSRRIGARS--HGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDGYK- 279 Query: 960 HEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLL--KQTSRL 1133 +TP GGF YGVV+ ++M+ G G KR + +R ++ + +L Sbjct: 280 -------------VTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVMRWAIRPPEWYLKL 326 Query: 1134 ALEDIKLKFIDTSSKFG 1184 + ++ +I +SK G Sbjct: 327 GVRKPEITYISLASKQG 343
>Q975I1:RL3_SULTO 50S ribosomal protein L3P - Sulfolobus tokodaii| Length = 343 Score = 200 bits (509), Expect = 1e-50 Identities = 129/345 (37%), Positives = 189/345 (54%), Gaps = 2/345 (0%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 M HRK PR GS G PRKR S +S+P +P L F+GYK GM+HI Sbjct: 1 MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEP-KLLGFVGYKVGMSHIFMID 59 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 434 +KP S + KE V++IETPP++ + + AYV P+G T + + +SED+ + Sbjct: 60 DKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLKLI-- 117 Query: 435 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 614 +++ T+ LK D + K ++ ++ +RV+ TQ + + L +KK Sbjct: 118 -----QQRKVTR--LKIDKEKMKGKLD-EINNKLNDILYLRVLIATQPKLVPSLGKKKPE 169 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 ++E+QV GG I +++Y K + V+ VF++ ++IDIIGVTKGKG++GVV R+GV Sbjct: 170 IVEVQVGGGDIKSQLNYVLNILGKPLSVKDVFKEGQLIDIIGVTKGKGFQGVVKRYGVVE 229 Query: 795 LPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEA 968 LPR K +G RKV G + SY V + GQ GYH RTE NK++ KI E Sbjct: 230 LPRWHKHRKGSRKVGARGPSF-STPSY-VPQPGQMGYHRRTEYNKRILKISDDPNE---- 283 Query: 969 CTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLR 1103 I P GGF +YG+V+ YL+I+G +G KKR + LR Sbjct: 284 ----------INPKGGFVNYGIVRNTYLIIEGSIIGAKKRPLFLR 318
>Q8ZW52:RL3_PYRAE 50S ribosomal protein L3P - Pyrobaculum aerophilum| Length = 338 Score = 200 bits (509), Expect = 1e-50 Identities = 127/344 (36%), Positives = 184/344 (53%), Gaps = 5/344 (1%) Frame = +3 Query: 87 KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 266 K PR GS+G PRKR + +V+++P+ + KP L F YKAGM H V ++P Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62 Query: 267 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRG--LRTLNSVWAQHLSEDVRRRFYKNW 440 S L+ KE +AVT+++ PPL + G Y P R + VWA L + + R Sbjct: 63 SPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPKFLHR------ 116 Query: 441 CKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLM 620 K D D K++ E+ + A VR + TQ + G+ +K L+ Sbjct: 117 -------VLTLPEKLDVDKQLKKV----EEFRDVAVDVRALVATQPH-LSGIGKKTPELL 164 Query: 621 EIQVNG-GTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 797 EI + G ++ +++++ K V + VF +++D+I VTKGKGY+GV+ R+GVT L Sbjct: 165 EIPIGGVPSVDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVIKRFGVTIL 224 Query: 798 PR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEAC 971 PR K +G R+ IG PA V +T R GQ G+H RTE NK++ KIG++G E Sbjct: 225 PRWHKHRKGHRRTGTIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE----- 278 Query: 972 TEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLR 1103 ITP GFPHYGVVKG Y++I+G G +KR+V LR Sbjct: 279 ---------ITPKSGFPHYGVVKGPYILIQGSVPGARKRLVVLR 313
>Q9HPD4:RL3_HALSA 50S ribosomal protein L3P - Halobacterium salinarium (Halobacterium| halobium) Length = 335 Score = 196 bits (499), Expect = 2e-49 Identities = 127/368 (34%), Positives = 186/368 (50%), Gaps = 6/368 (1%) Frame = +3 Query: 99 PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 278 PR GS+GF PRKR + S+P DD + L F GYKAGMTH+V +K + Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64 Query: 279 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 458 ET VT++ETPP+ + Y TP G + L VWA E + R Sbjct: 65 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDR------------ 112 Query: 459 AFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNG 638 L + G + ++ ++ A I RVI HT G+ +K +ME +V G Sbjct: 113 -----TLSVPDEGGDTDELIEALDTEEIADI-RVITHTVPGDTAGVPKKNPDVMETRVGG 166 Query: 639 GTIADKVDYGYKFFEKEVPVEA---VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 809 GT+AD++++ E + V A VF+ E D G+TKGKG +G V RWGV + K Sbjct: 167 GTLADRLEFAADLIE-DGGVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKH 225 Query: 810 HR--GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFD 983 R R++ +G W+P+RV TV + GQ GYH RTE+NK++ I + Sbjct: 226 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDEP--------- 276 Query: 984 RTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLL-KQTSRLALEDIKLKF 1160 TP GGFP+YG V G Y ++KG GP++R+V R ++ ++ RL D ++++ Sbjct: 277 ------TPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFRPAVRPNESPRL---DPEVRY 327 Query: 1161 IDTSSKFG 1184 + T+S G Sbjct: 328 VSTASNQG 335
>P20279:RL3_HALMA 50S ribosomal protein L3P - Haloarcula marismortui (Halobacterium| marismortui) Length = 338 Score = 196 bits (498), Expect = 2e-49 Identities = 123/342 (35%), Positives = 175/342 (51%), Gaps = 4/342 (1%) Frame = +3 Query: 99 PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 278 PR GSLGF PRKR + + S+P DD Q + F GYKAGMTH+V ++P S Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDDGQPG--VQGFAGYKAGMTHVVLVNDEPNSPRE 64 Query: 279 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 458 E VT+IETPP+ V L AY TP G R L VW ++ R Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 114 Query: 459 AFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNG 638 +D DA +++I+ E +R+I HT + + +KK +ME +V G Sbjct: 115 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169 Query: 639 GTIADKVDYGYKFFEK--EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 812 G+++D++D+ E E + +F+ E D+ GVTKGKG +G V RWGV + K Sbjct: 170 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229 Query: 813 R--GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDR 986 R R++ +G W+P+RV TV + GQ GYH RTE+NK++ IG+ + Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEP---------- 279 Query: 987 TEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSL 1112 T GGF +YG V G Y ++KG GP KR+V R ++ Sbjct: 280 -----TVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAV 316
>Q9UXA8:RL3_SULSO 50S ribosomal protein L3P - Sulfolobus solfataricus| Length = 351 Score = 193 bits (491), Expect = 1e-48 Identities = 124/354 (35%), Positives = 188/354 (53%), Gaps = 10/354 (2%) Frame = +3 Query: 75 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 254 M HRK PR GS G PRKR S +++P+ + Q P L F+GYK GMTH+ Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMID 59 Query: 255 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGL-RTLNSVWAQHLSE--DVRRR 425 + P S + KE VT++E PP++ + L AY +G + W+ + D+ RR Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRR 119 Query: 426 FYK--NWCK---SKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMK 590 + ++ K SKKK ++ K D I+ L+++ + R++ TQ RK+ Sbjct: 120 IHSISSFLKDDESKKKFDERFNTKLDL------IKSNLDRIVYF----RLLVSTQPRKIP 169 Query: 591 GLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGV 770 L +K L+EIQ+ GG ++DY KE+ + VF++ ++ID++GVTKGKG+ GV Sbjct: 170 SLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGV 229 Query: 771 VTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK 944 + R+ V LPR K +G RK+ G SYT + GQ G+H RTE NK++ KIG Sbjct: 230 IKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD 287 Query: 945 SGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQ 1106 K+I P GGF YG+V+ Y++++G +G KKR + LR+ Sbjct: 288 E--------------PKEINPAGGFVRYGIVRNTYVLLEGSILGSKKRPIFLRE 327
>Q6L1C7:RL3_PICTO 50S ribosomal protein L3P - Picrophilus torridus| Length = 329 Score = 192 bits (487), Expect = 4e-48 Identities = 115/365 (31%), Positives = 184/365 (50%), Gaps = 2/365 (0%) Frame = +3 Query: 96 HPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKL 275 H R GS+ + PR R R +G ++S+P+ + Q + AF GYK GMTHI + S Sbjct: 6 HSRRGSMAYYPRVRAKRIQGDIRSWPEIEGQTK--VQAFAGYKVGMTHIQMVDYRKNSVT 63 Query: 276 HKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKK 455 + VT++E PPL ++ + Y + GL ++ WA+++ +DV RR K Sbjct: 64 AGQVIMAPVTVVEVPPLTVMSIRYYARGDNGLEVISEEWAENIDKDVLRRINK------- 116 Query: 456 KAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVN 635 + KK I++ K VR++ HT + + G+ K + EI++ Sbjct: 117 -----------INRHKKGIEV------KDVDDVRLMVHTNPQLVSGVPSKTPEIFEIRIG 159 Query: 636 GGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 815 G TI +++ Y + + + +D+I VTKGKG++GVV R+GV LPRK + Sbjct: 160 GSTIENRIKYAKERLGSNISFSDFSKPGNFVDVIAVTKGKGFQGVVKRFGVKLLPRKNRK 219 Query: 816 GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTE- 992 R + +G WHP V TV +AGQ G+H RT N ++ K FD + Sbjct: 220 HRRMIGTLGPWHPDWVRNTVPQAGQVGFHQRTIHNIRIIK--------------FDTKDH 265 Query: 993 -KDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFIDT 1169 DI GGF +YG+V+ DY+++ G GP KR++ +R + +R A+E I++ ++ Sbjct: 266 VDDINVKGGFLNYGIVRNDYVLLFGSVPGPAKRLIKMRDP--ARQTRPAVESIEVTYVSR 323 Query: 1170 SSKFG 1184 SK G Sbjct: 324 ESKQG 328
>Q8TRU7:RL3_METAC 50S ribosomal protein L3P - Methanosarcina acetivorans| Length = 337 Score = 190 bits (482), Expect = 1e-47 Identities = 114/366 (31%), Positives = 184/366 (50%), Gaps = 4/366 (1%) Frame = +3 Query: 99 PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 278 P+ GSL F PRKR H + +++P+ + L +F GYK GMTH++ + S Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWPEATGEPK--LQSFAGYKVGMTHVIMVDDTKNSLTQ 64 Query: 279 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 458 E VT+IETP + + + AY + G + + VWA L +++RR Sbjct: 65 GMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRR----------- 113 Query: 459 AFTKYALKYDSDAGKKEIQLQLEKMKKYATI--VRVIAHTQIRKMKGLKQKKAHLMEIQV 632 + + + E + K+ + + VR + +T + + G+ +K +ME + Sbjct: 114 ------IPIPAAGNQAEALENIGKLIEEGRVSDVRAVIYTLPKSLTGVPKKVPDIMESGI 167 Query: 633 NGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 812 + + K +Y V V VF+ ++D +T GKG +G V RWG+ + K Sbjct: 168 SARDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHS 227 Query: 813 R--GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDR 986 R LR+V +GA++P+RVS+ V + GQ GYH RTE NK++ KIG G+E Sbjct: 228 RQGSLRQVGTLGAFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE---------- 277 Query: 987 TEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFID 1166 +TP GGF +YG+V+GDY++IKG GP KR++ LR + + + L + + +I Sbjct: 278 ----VTPEGGFINYGLVRGDYILIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYIS 331 Query: 1167 TSSKFG 1184 SK G Sbjct: 332 RESKQG 337
>Q2FU91:RL3_METHJ 50S ribosomal protein L3P - Methanospirillum hungatei (strain JF-1 /| DSM 864) Length = 337 Score = 187 bits (474), Expect = 1e-46 Identities = 122/366 (33%), Positives = 180/366 (49%), Gaps = 4/366 (1%) Frame = +3 Query: 99 PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 278 PR GSL + PRKR K ++P Q +P L F GYK GMTH++ + S Sbjct: 7 PRMGSLAYSPRKRAKSPVPKYHAWPAY-QGEPA-LQGFAGYKVGMTHVIMVDDHAHSPNE 64 Query: 279 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 458 K+ VT+IE P + + + Y G L VWA +++ RR Sbjct: 65 GKDIMVPVTVIEVPDMRVAAIRVYRHDTYGNHVLTEVWADSFDKELSRRL---------- 114 Query: 459 AFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRK--MKGLKQKKAHLMEIQV 632 + Y + +K+I+ LE K IV V+A T R + G+ +K LME ++ Sbjct: 115 ---NLSKNYKREEAEKKIREALEADK----IVDVVALTYTRPSVLTGVPKKVPDLMETRI 167 Query: 633 NGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 812 +GG++ ++ +YG K+ + ++F+ + D+ +TKGKG +G V RWGV RK Sbjct: 168 DGGSMTERFEYGLSMLGKDFDIRSLFKVGQYTDVTAITKGKGTQGPVKRWGVHLRKRKHS 227 Query: 813 RGL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDR 986 RG R V +G W P V + V GQ GYH RTE NK++ KIG+ G E Sbjct: 228 RGKKERHVGTLGPWTPHHVRWQVPMMGQMGYHQRTEFNKRLLKIGEDGAE---------- 277 Query: 987 TEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFID 1166 ITP GGF +YG V+ Y++IKG GP KR+V +R ++ + + + + FI Sbjct: 278 ----ITPEGGFINYGEVRARYVLIKGSVPGPSKRLVRIRHAM--RLGEHKIREPTIGFIS 331 Query: 1167 TSSKFG 1184 SK G Sbjct: 332 LESKQG 337
>Q8PV50:RL3_METMA 50S ribosomal protein L3P - Methanosarcina mazei (Methanosarcina| frisia) Length = 337 Score = 184 bits (466), Expect = 1e-45 Identities = 111/364 (30%), Positives = 182/364 (50%), Gaps = 2/364 (0%) Frame = +3 Query: 99 PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 278 P+ GSL F PRKR H + +++P+ + L +F GYK GMTH++ + S Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWPEATGEPK--LQSFAGYKVGMTHVIMVDDIKNSLTQ 64 Query: 279 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 458 E VT+IETP + + + AY + G + + WA L +++RR Sbjct: 65 GMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRI---------- 114 Query: 459 AFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNG 638 + G + I +E+ + + +R + +T + + G+ +K +ME ++ Sbjct: 115 ---PIPAAGNQAEGLENIGKLIEEGR--VSDIRAVTYTLPKSLTGVPKKVPDIMESGISA 169 Query: 639 GTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 815 + K +Y V V VF+ ++D +T GKG +G V RWG+ K R Sbjct: 170 KDLGAKFEYAKSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQ 229 Query: 816 -GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTE 992 LR++ +G+++P+RVS+ V + GQ GYH RTE NK++ KIG G+E Sbjct: 230 GSLRQIGTLGSFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE------------ 277 Query: 993 KDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFIDTS 1172 +TP GGF +YG+V+GDY++IKG GP KR++ LR + + + L + + +I Sbjct: 278 --VTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRE 333 Query: 1173 SKFG 1184 SK G Sbjct: 334 SKQG 337
>P60458:RL3_NANEQ 50S ribosomal protein L3P - Nanoarchaeum equitans| Length = 321 Score = 181 bits (460), Expect = 5e-45 Identities = 118/360 (32%), Positives = 185/360 (51%) Frame = +3 Query: 99 PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 278 PR GS+GF PRKR SR ++K++PK ++ KP AF YK GMTH + + + Sbjct: 9 PRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTILNI-------N 58 Query: 279 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 458 + VT++E P L+++G AY K L+ ++S++ L + V R+ K Sbjct: 59 GERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK-------- 110 Query: 459 AFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNG 638 LK + KKE Q A V++I TQ K+K +K + +I + G Sbjct: 111 ------LKNYNFEEKKE---QFLSKADNADEVKIIVSTQPWKIK--LKKTPEIFDIPIGG 159 Query: 639 GTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 818 + K++Y KE+ + VF++ + +D+I VTKGKG++GV+ R+ V R K+ +G Sbjct: 160 SDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKG 219 Query: 819 LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKD 998 +RKV IG+ P R+ TV GQ GYH RTE NK + KIG + Sbjct: 220 VRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIG-----------------EP 262 Query: 999 ITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFIDTSSK 1178 + GG+ YG V G +++KG GP+KR++ LR+++ + +E I ++I S K Sbjct: 263 LNVEGGWVRYGQVIGPTILLKGSVPGPRKRLIILREAIRPPRKQEKVEGI--EYISLSPK 320
>Q46G95:RL3_METBF 50S ribosomal protein L3P - Methanosarcina barkeri (strain Fusaro /| DSM 804) Length = 337 Score = 179 bits (455), Expect = 2e-44 Identities = 113/364 (31%), Positives = 176/364 (48%), Gaps = 2/364 (0%) Frame = +3 Query: 99 PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 278 P+ GSL F PRKR H + +++P+ + L F GYK GMTH++ + S Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWPEATGEP--RLQGFAGYKVGMTHVIMVDDTKNSLTQ 64 Query: 279 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKK 458 E VTIIETP + + + AY + G + + VWA L +++RR K Sbjct: 65 GMEISVPVTIIETPAIRVAAIRAYAEDTAGEKAIAEVWATDLDPELKRRIPVP--KGDNM 122 Query: 459 AFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNG 638 A T + + GK + +R + +T + + G+ +K +ME ++ Sbjct: 123 AETLGNIGKMIEEGK-------------VSDIRAVTYTLPKSLTGVPKKTPDIMESGISA 169 Query: 639 GTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 815 + K +Y V + VF+ +ID +T GKG +G RWG+ + K R Sbjct: 170 RDLNTKFEYAKSILGTLVSITDVFKTGTLIDTAAITIGKGTQGPAKRWGIQLMKGKHSRQ 229 Query: 816 -GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTE 992 LR++ +G + RVS+ V + GQ GYH RTE NK++ KIG G+E Sbjct: 230 GSLRQIGTLGGFGLRRVSWRVPQMGQTGYHQRTEFNKRILKIGSDGEE------------ 277 Query: 993 KDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFIDTS 1172 +TP GGF +YG+V+GDY++IKG GP KR++ LR + + + L + + I Sbjct: 278 --VTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILHISRE 333 Query: 1173 SKFG 1184 SK G Sbjct: 334 SKQG 337
>Q29293:RL3_PIG 60S ribosomal protein L3 - Sus scrofa (Pig)| Length = 130 Score = 171 bits (432), Expect = 9e-42 Identities = 80/129 (62%), Positives = 100/129 (77%), Gaps = 6/129 (4%) Frame = +3 Query: 690 VPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 869 VPV VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPAR ++ Sbjct: 2 VPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAF 61 Query: 870 TVARAGQNGYHHRTEMNKKVYKIG-----KSGQ-ESHEACTEFDRTEKDITPMGGFPHYG 1031 +VARAGQ GYHHRTE+NKK+YKIG K G+ + T++D ++K I P+G F HYG Sbjct: 62 SVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYG 121 Query: 1032 VVKGDYLMI 1058 V D++M+ Sbjct: 122 EVTNDFVML 130
>Q97BX7:RL3_THEVO 50S ribosomal protein L3P - Thermoplasma volcanium| Length = 331 Score = 165 bits (418), Expect = 4e-40 Identities = 108/364 (29%), Positives = 178/364 (48%), Gaps = 1/364 (0%) Frame = +3 Query: 96 HPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKL 275 H R GS+ + PR R +++S+P + P + F G+K GMTH+ + S Sbjct: 6 HSRRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVT 63 Query: 276 HKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKK 455 + VT+IE PPL ++G+ Y + G + Y+ W ++ Sbjct: 64 AGQPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVV---------------VYEKWTQNLD 108 Query: 456 KAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVN 635 K K + KE++ + + YA VR+I T+ + + G+ KK + E+++ Sbjct: 109 KELFKKITTF------KEVK-EKPVPETYAD-VRLIVATRNKDVPGIPSKKPEIFELRIG 160 Query: 636 GG-TIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 812 GG ++ ++ +Y K + E + + +D++ VTKGKG+ G V R+GV LPRK Sbjct: 161 GGNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKLLPRKNR 220 Query: 813 RGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTE 992 + R + +G WHP V TV +AGQ GY RT N +V K K G+++ Sbjct: 221 KHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSK-GEDA----------- 268 Query: 993 KDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFIDTS 1172 I GGF HYG+VK DY+++ G GP KR++ +R ++ ++++KL +I Sbjct: 269 DTINVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIKMRDPARQKVP--DIDNVKLDYISLE 326 Query: 1173 SKFG 1184 SK G Sbjct: 327 SKQG 330
>Q9HIQ9:RL3_THEAC 50S ribosomal protein L3P - Thermoplasma acidophilum| Length = 331 Score = 162 bits (411), Expect = 2e-39 Identities = 105/365 (28%), Positives = 174/365 (47%), Gaps = 2/365 (0%) Frame = +3 Query: 96 HPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKL 275 H R GS+ + PR R K++S+P+ + + F G+K GMTH+ + S Sbjct: 6 HSRRGSMAYYPRVRAKSVDPKIRSWPEIKGE--VKVQGFAGFKVGMTHVEMIDYRKKSVT 63 Query: 276 HKKETCEAVTIIETPPLVIVGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRRFYKNWCKSK 452 + VT++E PPL +VG Y + G L + WA+ L +++ R+ + K Sbjct: 64 AGQPILVPVTVVEVPPLDVVGYRLYDEDAEGNLVVVFEAWAKDLDKEIFRKIPE----IK 119 Query: 453 KKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQV 632 K A Y+ VR+I T+ + + G+ KK + E+++ Sbjct: 120 KVAERDPPESYED--------------------VRIIVATRNKDVPGIPSKKPEIFELRI 159 Query: 633 NGG-TIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 809 GG ++ ++++Y K++ + + +D++ +TKGKG+ G V R+GV LPRK Sbjct: 160 GGGNSVKERLEYAKNHLGKQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKN 219 Query: 810 HRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRT 989 + R + +G WHP V TV +AGQ G+ RT N +V K G + Sbjct: 220 RKHRRMIGTLGPWHPDWVRNTVPQAGQMGFQQRTISNVRVIKYGNKEEVD---------- 269 Query: 990 EKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFIDT 1169 I GGF HYG VK DY+++ G G KR++ +R ++ +E++KL++I Sbjct: 270 --SINVRGGFLHYGFVKNDYVLLFGSIPGASKRLIKMRDPARQKVP--DIEEVKLEYISL 325 Query: 1170 SSKFG 1184 SK G Sbjct: 326 ESKQG 330
>Q2S3R4:RL3_SALRD 50S ribosomal protein L3 - Salinibacter ruber (strain DSM 13855)| Length = 208 Score = 57.8 bits (138), Expect = 1e-07 Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 4/158 (2%) Frame = +3 Query: 477 LKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADK 656 +K + G +QL + +K+ ++ H + K K L E + G D Sbjct: 38 VKSEGRDGYSAVQLGFDNVKEKNVTQAMLGHFE----KAGCPPKRMLSEFRDFG----DD 89 Query: 657 VDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH---RGLRK 827 VD G V V+ +FQ+DE ID++GV+KGKG++GVV R G + + TH R Sbjct: 90 VDLG-----DVVRVQDLFQEDERIDVVGVSKGKGFQGVVKRHGFSGVGMMTHGQSDRQRH 144 Query: 828 VACIGA-WHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 IGA P+RV V AGQ G N +V +I Sbjct: 145 PGSIGASADPSRVFKGVRMAGQTGGERTKIQNLRVVRI 182
>Q98PY0:RL3_MYCPU 50S ribosomal protein L3 - Mycoplasma pulmonis| Length = 266 Score = 51.6 bits (122), Expect = 8e-06 Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 1/227 (0%) Frame = +3 Query: 486 DSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQ-VNGGTIADKVD 662 D G K IQL LE KK I H K K + EI+ + G + VD Sbjct: 40 DEKNGYKAIQLSLEDKKKSRQRKPEIGHFA----KANTTPKRFVKEIRDMQGFELGSNVD 95 Query: 663 YGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIG 842 ++F E +D+ G++KGKG+ G + R ++ K+H G G Sbjct: 96 V------------SIFTPGEFVDVTGISKGKGFAGTIKRHN-QKIGPKSHGG------GG 136 Query: 843 AWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFP 1022 P R Q G NK V + G HE T E +T Sbjct: 137 GSKPVR---------QTGSLGDISGNKVVKGMTMPGHLGHEQVT-IQNLEVIMTD----- 181 Query: 1023 HYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFI 1163 VK + L++KG GPKK V +++ K S+ A++ + L+ + Sbjct: 182 ----VKNNILLVKGAVPGPKKGFVVIKECAKKIPSKEAVKLVDLEIV 224
>Q890N9:RL3_CLOTE 50S ribosomal protein L3 - Clostridium tetani| Length = 209 Score = 51.6 bits (122), Expect = 8e-06 Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 4/147 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWH 851 +E+ V+ +F+ E ID+ G +KGKGY+G++ RW R P K HR + + A + Sbjct: 95 QEIKVD-IFEAGEKIDVTGTSKGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMG--AASY 151 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYG 1031 PAR AG G T +N +V K Sbjct: 152 PARTFKNKRMAGHMGNVKSTVLNLEVVKT------------------------------- 180 Query: 1032 VVKGDYLMIKGCCVGPKKRVVTLRQSL 1112 + + + ++IKG GP K V +R S+ Sbjct: 181 IPEKNLILIKGGIPGPNKGYVIIRNSI 207
>Q97EH8:RL3_CLOAB 50S ribosomal protein L3 - Clostridium acetobutylicum| Length = 209 Score = 50.1 bits (118), Expect = 2e-05 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYT 872 +F E +D+ GV+KGKG++G + RWG R P K HR + + G+ P+R + Sbjct: 101 IFAAGEKVDVSGVSKGKGFQGTIRRWGAHRGPMSHGSKFHRAVGSMG--GSSDPSRTFKS 158 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 G G+ + T +N +V K+ Sbjct: 159 KKMPGHMGHVNTTVLNVEVAKV 180
>Q839G4:RL3_ENTFA 50S ribosomal protein L3 - Enterococcus faecalis (Streptococcus| faecalis) Length = 209 Score = 49.7 bits (117), Expect = 3e-05 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 1/153 (0%) Frame = +3 Query: 657 VDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVA 833 V+ G KE+ V+ VFQ +++D+ G TKGKG++G + R G +R P R R+ Sbjct: 86 VELGEYEVGKEIKVD-VFQAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMSHGSRYHRRPG 144 Query: 834 CIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMG 1013 +G P RV AG+ G T N +V K+ Sbjct: 145 SMGPVAPNRVFKNKRLAGRMGGDRVTIQNLEVVKVD------------------------ 180 Query: 1014 GFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSL 1112 V+ + ++IKG G KK ++T++ ++ Sbjct: 181 -------VERNVILIKGNIPGAKKSLITIKSAV 206
>Q64NK8:RL3_BACFR 50S ribosomal protein L3 - Bacteroides fragilis| Length = 205 Score = 49.7 bits (117), Expect = 3e-05 Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 10/157 (6%) Frame = +3 Query: 498 GKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKF 677 G +QL + K+ T ++ H K G+ K+ HL E +K Sbjct: 44 GYAAVQLGFQDKKEKHTTKPLMGHF---KKAGVTPKR-HLAE---------------FKE 84 Query: 678 FEKE------VPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKV 830 FE E V VE +F + +D++G +KGKG++GVV R G + + T H RK Sbjct: 85 FENELNLGDTVTVE-LFDGADYVDVVGTSKGKGFQGVVKRHGFGGVGQSTHGQHNRARKP 143 Query: 831 ACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 IGA +PA+V + GQ G T N +V K+ Sbjct: 144 GSIGACSYPAKVFKGMRMGGQMGGDRVTVQNLQVLKV 180
>Q5L8A9:RL3_BACFN 50S ribosomal protein L3 - Bacteroides fragilis (strain ATCC 25285| / NCTC 9343) Length = 205 Score = 49.7 bits (117), Expect = 3e-05 Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 10/157 (6%) Frame = +3 Query: 498 GKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKF 677 G +QL + K+ T ++ H K G+ K+ HL E +K Sbjct: 44 GYAAVQLGFQDKKEKHTTKPLMGHF---KKAGVTPKR-HLAE---------------FKE 84 Query: 678 FEKE------VPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKV 830 FE E V VE +F + +D++G +KGKG++GVV R G + + T H RK Sbjct: 85 FENELNLGDTVTVE-LFDGADYVDVVGTSKGKGFQGVVKRHGFGGVGQSTHGQHNRARKP 143 Query: 831 ACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 IGA +PA+V + GQ G T N +V K+ Sbjct: 144 GSIGACSYPAKVFKGMRMGGQMGGDRVTVQNLQVLKV 180
>Q7XYP4:RK3_BIGNA 50S ribosomal protein L3, chloroplast precursor - Bigelowiella| natans (Pedinomonas minutissima) (Chlorarachnion sp. (strain CCMP 621)) Length = 302 Score = 49.7 bits (117), Expect = 3e-05 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 4/119 (3%) Frame = +3 Query: 567 HTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVT 746 H ++ MK LK+ K IAD ++ +++ E +F+ +++D+ G + Sbjct: 159 HGNVKAMKHLKEFK------------IADVSEFTPG---QQLKAEELFEVGDLVDVSGTS 203 Query: 747 KGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRT 911 GKG++G + RWG+ R P K+HR + C P+RV + AG+ G +T Sbjct: 204 SGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSAT--PSRVYKGLKMAGRMGNERKT 260
>Q7MTL3:RL3_PORGI 50S ribosomal protein L3 - Porphyromonas gingivalis (Bacteroides| gingivalis) Length = 205 Score = 49.3 bits (116), Expect = 4e-05 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Frame = +3 Query: 708 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYTV 875 F + +D++G +KGKG++GVV R G + + T H LR +GA +PA+V Sbjct: 100 FSDADFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGT 159 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 AGQ G T N +V K+ Sbjct: 160 RMAGQMGNERVTVQNLEVIKV 180
>Q6ACZ5:RL3_LEIXX 50S ribosomal protein L3 - Leifsonia xyli subsp. xyli| Length = 219 Score = 49.3 bits (116), Expect = 4e-05 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 3/114 (2%) Frame = +3 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWG 785 + HL E++ AD +Y +E+ V+ F+ +++D++G +K KG+ GV+ R Sbjct: 84 RRHLTEVRT-----ADAAEYSAG---QELTVDGTFEAGQLVDVVGTSKSKGFAGVMKRHN 135 Query: 786 VTRLPRK--THRGLRKVACIGAWH-PARVSYTVARAGQNGYHHRTEMNKKVYKI 938 + HR RK IGA P+RV + AG+ G T +N KV I Sbjct: 136 FQGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLKVQAI 189
>Q5L3Z7:RL3_GEOKA 50S ribosomal protein L3 - Geobacillus kaustophilus| Length = 213 Score = 49.3 bits (116), Expect = 4e-05 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 1/148 (0%) Frame = +3 Query: 498 GKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKF 677 G + IQL E + + I H K K + EI+ G D+ + G Sbjct: 45 GYEAIQLGFEDISEKRANKPQIGHAA----KANTAPKRFIREIR---GANIDEYEVG--- 94 Query: 678 FEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHP 854 +EV V+ +F + E++D+ G++KGKG++G + R G +R P R R+ +G+ P Sbjct: 95 --QEVKVD-IFSEGEIVDVTGISKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGSIAP 151 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 RV T G+ G T N K+ K+ Sbjct: 152 NRVFKTKNLPGRMGGERVTIQNLKIVKV 179
>Q6KI55:RL3_MYCMO 50S ribosomal protein L3 - Mycoplasma mobile| Length = 297 Score = 48.1 bits (113), Expect = 9e-05 Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 13/173 (7%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG------LRKVACIGAWHPARVS 866 +F+ E++D+ G++KGKG+ G + R ++ K+H G +R+ IG +V Sbjct: 98 IFKSGELVDVTGISKGKGFAGTIKRHN-QKIGPKSHGGGGGSKPVRQTGSIGDIAGNKVL 156 Query: 867 YTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGD 1046 + G G RT N +V K+ +K + Sbjct: 157 KGMTMPGHLGNVQRTIQNLEVVKVD-------------------------------IKNN 185 Query: 1047 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLK-------FIDTSSKFG 1184 L++KG GPK + ++ ++ SR A+E + +K ++++ K+G Sbjct: 186 ILLVKGSVPGPKNCFLIIKSAIKNLPSREAIELVNIKEAILKNQLLESAKKYG 238
>P28600:RL3_BACST 50S ribosomal protein L3 - Bacillus stearothermophilus (Geobacillus| stearothermophilus) Length = 213 Score = 48.1 bits (113), Expect = 9e-05 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPAR 860 +EV V+ +F + +++D+ G++KGKG++G + R G +R P R R+ +GA P R Sbjct: 95 QEVKVD-IFSEGDIVDVTGISKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGAIAPNR 153 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 V T G+ G T N K+ K+ Sbjct: 154 VFKTKNLPGRMGGERVTIQNLKIVKV 179
>Q8A476:RL3_BACTN 50S ribosomal protein L3 - Bacteroides thetaiotaomicron| Length = 205 Score = 47.8 bits (112), Expect = 1e-04 Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 10/157 (6%) Frame = +3 Query: 498 GKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKF 677 G +QL + K+ T ++ H K G+ K+ HL E +K Sbjct: 44 GYAAVQLGFQDKKEKHTTKPLMGHF---KRAGVTPKR-HLAE---------------FKE 84 Query: 678 FEKE------VPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKV 830 FE E + VE +F +D++G +KGKG++GVV R G + + T H RK Sbjct: 85 FETELNLGDTITVE-MFNDATFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRARKP 143 Query: 831 ACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 IGA +PA+V + GQ G T N +V K+ Sbjct: 144 GSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
>Q2LQA1:RL3_SYNAS 50S ribosomal protein L3 - Syntrophus aciditrophicus (strain SB)| Length = 218 Score = 46.2 bits (108), Expect = 3e-04 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTV 875 +F+ EM+DI G TKGKG+ GV+ R G R R +H + R IGA +P+RV Sbjct: 110 IFESGEMVDITGTTKGKGFAGVIKRHGF-RGGRSSHGSMFHRAPGSIGASAYPSRVFKGK 168 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 GQ G +T N ++ + Sbjct: 169 KLPGQMGNKQKTVKNLMIWSL 189
>Q8XHS3:RL3_CLOPE 50S ribosomal protein L3 - Clostridium perfringens| Length = 209 Score = 46.2 bits (108), Expect = 3e-04 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 4/146 (2%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 854 E+ V+ F+ + +D+ GV+KGKG++G + RW +R P K HR + A P Sbjct: 96 EIKVDT-FEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMG--AASDP 152 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGV 1034 +R G G + T +N +V KI EK+I Sbjct: 153 SRTFKNKRMPGHMGAKNTTVLNLEVVKI---------------MPEKNI----------- 186 Query: 1035 VKGDYLMIKGCCVGPKKRVVTLRQSL 1112 ++IKG GP K V +R S+ Sbjct: 187 -----ILIKGGIPGPNKGTVVIRNSV 207
>Q47LJ3:RL3_THEFY 50S ribosomal protein L3 - Thermobifida fusca (strain YX)| Length = 216 Score = 45.8 bits (107), Expect = 4e-04 Identities = 32/81 (39%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL--PRKTHRGLRKVACIGAW-HPARVSYTV 875 VFQ E +D+ G TKGKGY GV+ R G L T R R IG P RV + Sbjct: 105 VFQPGEKVDVTGKTKGKGYAGVMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGM 164 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 AG+ G RT N V+ + Sbjct: 165 RMAGRMGNVRRTVQNLTVHSV 185
>Q8G417:RL3_BIFLO 50S ribosomal protein L3 - Bifidobacterium longum| Length = 213 Score = 45.8 bits (107), Expect = 4e-04 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 4/173 (2%) Frame = +3 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEA-VFQKDEMIDIIGVTKGKGYEGVVTRW 782 + HL+E++ D VD FE + A +F++ +D+ G TKGKG+ G + RW Sbjct: 79 RRHLVEVRT------DDVDQ----FEAGQELAADLFEEGAEVDVTGTTKGKGFAGTIKRW 128 Query: 783 GVT--RLPRKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQ 953 G R +H+ R+ +GA P+R+ AG+ G+ T N V Sbjct: 129 GFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVSAD---- 184 Query: 954 ESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSL 1112 V+ L IKG GPK +V +R ++ Sbjct: 185 ---------------------------VENGILAIKGAIPGPKGGIVLVRSAV 210
>Q9ZI50:RL3_AQUPY 50S ribosomal protein L3 - Aquifex pyrophilus| Length = 244 Score = 45.8 bits (107), Expect = 4e-04 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 842 +E+ V+ VF+ +++D+ G++KG+G+ GV+ RW PR HR R V IG Sbjct: 96 QELRVQDVFKPGDLVDVWGISKGRGFAGVMKRWDFAGFPRSHGHRYHRAVGAIG 149
>O46894:RK3_GUITH Chloroplast 50S ribosomal protein L3 - Guillardia theta| (Cryptomonas phi) Length = 204 Score = 45.8 bits (107), Expect = 4e-04 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 6/162 (3%) Frame = +3 Query: 477 LKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGG---TI 647 LK D+ IQ+ +++ + H Q+ + LK HL E +V+ TI Sbjct: 38 LKSDTKDNYNAIQIGYQQVDAKKLTKPQLGHLQVNNLPPLK----HLKEYKVDATHTFTI 93 Query: 648 ADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGL 821 A ++D ++F+ +++ + GV+ GKG+ G V R TR P TH + Sbjct: 94 AQQLDV------------SIFELGQIVSVSGVSIGKGFAGTVKRHNFTRGP-MTHGSKNH 140 Query: 822 RKVACIGAWH-PARVSYTVARAGQNGYHHRTEMNKKVYKIGK 944 R+ IG PA+V AG+ G H T N V + K Sbjct: 141 REPGSIGQGSTPAKVHKGKKMAGRLGGHQVTTKNLTVVHLDK 182
>P42920:RL3_BACSU 50S ribosomal protein L3 - Bacillus subtilis| Length = 209 Score = 45.4 bits (106), Expect = 6e-04 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 860 +EV VE +F E++D+ GV+KGKG++G + R G +R P R R+ +G P R Sbjct: 95 QEVKVE-IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNR 153 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 V G+ G T N ++ K+ Sbjct: 154 VFKGKLLPGRMGGEQITVQNLEIVKV 179
>Q2IJD0:RL3_ANADE 50S ribosomal protein L3 - Anaeromyxobacter dehalogenans (strain| 2CP-C) Length = 236 Score = 45.4 bits (106), Expect = 6e-04 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Frame = +3 Query: 612 HLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRW--- 782 H+ EI+V + + G + V+ VF+ ++ ID+ GVTKG+G+ GV+ RW Sbjct: 82 HVKEIRVKDAKLLGDLKAG-----DVLTVDKVFKANQRIDVAGVTKGRGFTGVMKRWNMK 136 Query: 783 GVTRLPRKTHRGLRKVACIG 842 G R H R V IG Sbjct: 137 GAARDSSTAHEHHRHVGAIG 156
>Q6AP71:RL3_DESPS 50S ribosomal protein L3 - Desulfotalea psychrophila| Length = 209 Score = 44.7 bits (104), Expect = 0.001 Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 4/62 (6%) Frame = +3 Query: 690 VPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPA 857 + V+A+F+ +++D+ G +KG+G++GV+ RWG P K HR + C + +P Sbjct: 99 ISVDALFKAGDIVDVQGTSKGRGFQGVIKRWGFKGGPGGHGSKHHRAPGSIGC--SAYPG 156 Query: 858 RV 863 RV Sbjct: 157 RV 158
>Q6HPQ8:RL3_BACHK 50S ribosomal protein L3 - Bacillus thuringiensis subsp. konkukian| Length = 210 Score = 44.7 bits (104), Expect = 0.001 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 860 +EV V+ VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P R Sbjct: 95 QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 V AG+ G T N ++ ++ Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179
>Q63H90:RL3_BACCZ 50S ribosomal protein L3 - Bacillus cereus (strain ZK / E33L)| Length = 210 Score = 44.7 bits (104), Expect = 0.001 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 860 +EV V+ VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P R Sbjct: 95 QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 V AG+ G T N ++ ++ Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179
>Q81J42:RL3_BACCR 50S ribosomal protein L3 - Bacillus cereus (strain ATCC 14579 / DSM| 31) Length = 210 Score = 44.7 bits (104), Expect = 0.001 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 860 +EV V+ VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P R Sbjct: 95 QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 V AG+ G T N ++ ++ Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179
>Q73F96:RL3_BACC1 50S ribosomal protein L3 - Bacillus cereus (strain ATCC 10987)| Length = 210 Score = 44.7 bits (104), Expect = 0.001 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 860 +EV V+ VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P R Sbjct: 95 QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 V AG+ G T N ++ ++ Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179
>Q81VT0:RL3_BACAN 50S ribosomal protein L3 - Bacillus anthracis| Length = 210 Score = 44.7 bits (104), Expect = 0.001 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 860 +EV V+ VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P R Sbjct: 95 QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 V AG+ G T N ++ ++ Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179
>Q9A1X4:RL3_STRP1 50S ribosomal protein L3 - Streptococcus pyogenes serotype M1| Length = 208 Score = 43.9 bits (102), Expect = 0.002 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ VE F+ +++D+ G++KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 ELSVEQ-FEAGDVVDVTGISKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 AG+ G + T N ++ ++ Sbjct: 153 FKNKRLAGRMGGNRVTVQNLEIVQV 177
>Q83FY6:RL3_TROWT 50S ribosomal protein L3 - Tropheryma whipplei (strain Twist)| (Whipple's bacillus) Length = 210 Score = 43.5 bits (101), Expect = 0.002 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 875 +FQ+ +++D++G +KGKG+ G + R +HR RK +GA P+RV Sbjct: 96 IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 AG+ G T N ++ KI Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176
>Q83I78:RL3_TROW8 50S ribosomal protein L3 - Tropheryma whipplei (strain TW08/27)| (Whipple's bacillus) Length = 210 Score = 43.5 bits (101), Expect = 0.002 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 875 +FQ+ +++D++G +KGKG+ G + R +HR RK +GA P+RV Sbjct: 96 IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 AG+ G T N ++ KI Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176
>Q5XED5:RL3_STRP6 50S ribosomal protein L3 - Streptococcus pyogenes serotype M6| Length = 208 Score = 43.5 bits (101), Expect = 0.002 Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 1/143 (0%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ VE F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 ELSVEQ-FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKG 1043 AG+ G + T N ++ ++ +++ Sbjct: 153 FKNKRLAGRMGGNRVTVQNLEIVQV-------------------------------ILEK 181 Query: 1044 DYLMIKGCCVGPKKRVVTLRQSL 1112 + +++KG G KK ++T++ ++ Sbjct: 182 NVILVKGNVPGAKKSLITIKSAV 204
>Q8Y440:RL3_LISMO 50S ribosomal protein L3 - Listeria monocytogenes| Length = 209 Score = 43.5 bits (101), Expect = 0.002 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 EV V+ VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 G+ G T N ++ K+ Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179
>Q71WE6:RL3_LISMF 50S ribosomal protein L3 - Listeria monocytogenes serotype 4b| (strain F2365) Length = 209 Score = 43.5 bits (101), Expect = 0.002 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 EV V+ VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 G+ G T N ++ K+ Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179
>Q927K7:RL3_LISIN 50S ribosomal protein L3 - Listeria innocua| Length = 209 Score = 43.5 bits (101), Expect = 0.002 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 EV V+ VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 G+ G T N ++ K+ Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179
>Q8KAH2:RL3_CHLTE 50S ribosomal protein L3 - Chlorobium tepidum| Length = 209 Score = 43.5 bits (101), Expect = 0.002 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 7/121 (5%) Frame = +3 Query: 597 KQKKAHLMEIQVNGGTIADKVDYGYKFFEKE----VPVEAVFQKDEMIDIIGVTKGKGYE 764 K H + N G I +V E E VPV+ VF++ + ++++GVTKGKG+ Sbjct: 62 KPLAGHYKKAGKNPGYILSEVSKSLIVGELEAGATVPVD-VFKEGDKVNVLGVTKGKGFA 120 Query: 765 GVVTR---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYK 935 GVV R G +R ++ R + G+ P+R AG+ G ++T N + K Sbjct: 121 GVVKRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGKNKTVQNLVIVK 180 Query: 936 I 938 + Sbjct: 181 V 181
>Q3APH3:RL3_CHLCH 50S ribosomal protein L3 - Chlorobium chlorochromatii (strain CaD3)| Length = 209 Score = 43.5 bits (101), Expect = 0.002 Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Frame = +3 Query: 519 QLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPV 698 Q+++ K +++ + ++ K K + H + V G V++ + +E+ V Sbjct: 36 QIKRTDKEGYDAYQVSYGERKEQKVSKPLQGHYKKAGVTPGYTL--VEFSFAELNQELAV 93 Query: 699 EAV-----FQKDEMIDIIGVTKGKGYEGVVTRW---GVTRLPRKTHRGLRKVACIGAWHP 854 + F E ++++GV+KGKG+ GVV R+ G +R ++ R + G+ P Sbjct: 94 GSQVSVEGFNVGEKVNVLGVSKGKGFAGVVKRYNFGGGSRTHGQSDRLRAPGSVGGSSDP 153 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 +RV AG+ G + T N +++K+ Sbjct: 154 SRVFKGTRMAGRKGSANITVKNLEIFKV 181
>Q3A9R6:RL3_CARHZ 50S ribosomal protein L3 - Carboxydothermus hydrogenoformans| (strain Z-2901 / DSM 6008) Length = 209 Score = 43.5 bits (101), Expect = 0.002 Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 4/151 (2%) Frame = +3 Query: 498 GKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKF 677 G IQL ++K+ + H +K ++ +L EI+V D + G Sbjct: 45 GYNAIQLGFGEIKESKVNKPLKGHFNRANVKPMR----YLREIRVEN---IDAYEVG--- 94 Query: 678 FEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGA 845 +E+ V+ +F E +D+ G++KGKG+ G + R G R P K H R+ +GA Sbjct: 95 --QEIKVD-IFTVGEKVDVTGISKGKGFAGGIKRHGFHRGPMAHGSKYH---RRPGSLGA 148 Query: 846 WHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 PARV G+ G T N +V K+ Sbjct: 149 KGPARVFLGRKLPGRLGMERVTIQNLEVVKV 179
>O66431:RL3_AQUAE 50S ribosomal protein L3 - Aquifex aeolicus| Length = 241 Score = 43.5 bits (101), Expect = 0.002 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 842 +++ VE VF+ +++D+ G++KG+G+ G + RW P+ HR R V IG Sbjct: 96 QQLKVEDVFKPGDLVDVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIG 149
>P38515:RL3_THEMA 50S ribosomal protein L3 - Thermotoga maritima| Length = 207 Score = 43.1 bits (100), Expect = 0.003 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR----KTHRGLRKVACIGAWHPARVSYT 872 VF+K E +D+ G TKG+G+ G + RWG + P+ K HR L V PA++ Sbjct: 97 VFEKGEYVDVTGWTKGRGFAGAMKRWGFSGGPKSHGSKFHRELGSVG--QHTEPAKIWKG 154 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 G+ G T N +V I Sbjct: 155 KKMPGRYGNERVTVRNLQVVDI 176
>Q5M2B3:RL3_STRT2 50S ribosomal protein L3 - Streptococcus thermophilus (strain ATCC| BAA-250 / LMG 18311) Length = 208 Score = 43.1 bits (100), Expect = 0.003 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ V+ +F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 EITVD-IFEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 AG+ G + T N ++ ++ Sbjct: 153 FKNKHLAGRMGGNRVTIQNLEIVQV 177
>Q5LXR1:RL3_STRT1 50S ribosomal protein L3 - Streptococcus thermophilus (strain CNRZ| 1066) Length = 208 Score = 43.1 bits (100), Expect = 0.003 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ V+ +F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 EITVD-IFEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 AG+ G + T N ++ ++ Sbjct: 153 FKNKHLAGRMGGNRVTIQNLEIVQV 177
>Q8DS16:RL3_STRMU 50S ribosomal protein L3 - Streptococcus mutans| Length = 208 Score = 43.1 bits (100), Expect = 0.003 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPAR 860 +E+ VE F+ +++D+ G TKGKG++G + R G +R P R R+ +G P R Sbjct: 93 QEITVEQ-FEAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNR 151 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 V AG+ G + T N +V ++ Sbjct: 152 VFKGKNLAGRMGGNRVTVQNLEVVQV 177
>P60457:RL3_SPIKU 50S ribosomal protein L3 - Spiroplasma kunkelii| Length = 258 Score = 43.1 bits (100), Expect = 0.003 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 1/137 (0%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWHPARVSYTVAR 881 +F E +D+ G +KGKG+ G + R +R P G R V +GA P R+ + Sbjct: 98 IFTAGEFVDVTGTSKGKGFTGSIKRHNYSRGPMGHGSGYHRGVGSMGAIAPNRILKSKKM 157 Query: 882 AGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIK 1061 G G T N ++ I TEK+ L++K Sbjct: 158 PGHIGTEKVTIQNLEIIAID---------------TEKNA----------------LLVK 186 Query: 1062 GCCVGPKKRVVTLRQSL 1112 G GPKK+ V +++++ Sbjct: 187 GSIPGPKKQFVVIKEAI 203
>Q3A6P7:RL3_PELCD 50S ribosomal protein L3 - Pelobacter carbinolicus (strain DSM 2380| / Gra Bd 1) Length = 210 Score = 43.1 bits (100), Expect = 0.003 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 4/88 (4%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG--AWHP 854 E+ + F ++ID+ G +KGKG++GV+ RW R +H + R+ IG AW P Sbjct: 96 EITCDGFFATGDVIDVTGTSKGKGFQGVIKRWNFAG-GRASHGSMFHRRPGGIGASAW-P 153 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 +RV AGQ G T +V + Sbjct: 154 SRVFKGKKMAGQMGNKRVTTQGLEVVDV 181
>Q65PA7:RL3_BACLD 50S ribosomal protein L3 - Bacillus licheniformis (strain DSM 13 /| ATCC 14580) Length = 209 Score = 43.1 bits (100), Expect = 0.003 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 860 +EV V+ +F E++D+ G +KGKG++G + R G +R P R R+ +G P R Sbjct: 95 QEVKVD-IFSNGEIVDVTGTSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNR 153 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 V G+ G T N ++ K+ Sbjct: 154 VFKGKLLPGRMGGEQITVQNLEIVKV 179
>Q48VU9:RL3_STRPM 50S ribosomal protein L3 - Streptococcus pyogenes serotype M28| Length = 208 Score = 42.7 bits (99), Expect = 0.004 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ VE F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 ELSVEQ-FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 AG+ G + T N ++ ++ Sbjct: 153 FKNKRLAGRMGGNRVTVQNLEIVQV 177
>P60452:RL3_STRP8 50S ribosomal protein L3 - Streptococcus pyogenes serotype M18| Length = 208 Score = 42.7 bits (99), Expect = 0.004 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ VE F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 ELSVEQ-FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 AG+ G + T N ++ ++ Sbjct: 153 FKNKRLAGRMGGNRVTVQNLEIVQV 177
>P60451:RL3_STRP3 50S ribosomal protein L3 - Streptococcus pyogenes serotype M3| Length = 208 Score = 42.7 bits (99), Expect = 0.004 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ VE F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 ELSVEQ-FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 AG+ G + T N ++ ++ Sbjct: 153 FKNKRLAGRMGGNRVTVQNLEIVQV 177
>Q8E2D1:RL3_STRA5 50S ribosomal protein L3 - Streptococcus agalactiae serotype V| Length = 208 Score = 42.7 bits (99), Expect = 0.004 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ VE F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 ELSVEQ-FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 AG+ G + T N ++ ++ Sbjct: 153 FKNKRLAGRMGGNRVTVQNLEIVQV 177
>Q8E7T8:RL3_STRA3 50S ribosomal protein L3 - Streptococcus agalactiae serotype III| Length = 208 Score = 42.7 bits (99), Expect = 0.004 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ VE F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 ELSVEQ-FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 AG+ G + T N ++ ++ Sbjct: 153 FKNKRLAGRMGGNRVTVQNLEIVQV 177
>Q3K3W9:RL3_STRA1 50S ribosomal protein L3 - Streptococcus agalactiae serotype Ia| Length = 208 Score = 42.7 bits (99), Expect = 0.004 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ VE F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 ELSVEQ-FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKI 938 AG+ G + T N ++ ++ Sbjct: 153 FKNKRLAGRMGGNRVTVQNLEIVQV 177
>P10134:RL3_MYCCT 50S ribosomal protein L3 - Mycoplasma capricolum subsp. capricolum| (strain California kid / ATCC 27343 / NCTC 10154) Length = 223 Score = 42.7 bits (99), Expect = 0.004 Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 4/155 (2%) Frame = +3 Query: 690 VPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHPA 857 + V +F E +D+ G++KGKG+ G + R +R P HRG+ + I Sbjct: 94 INVSDIFVSGEYVDVTGISKGKGFAGGIKRHNYSRGPMAHGSGYHRGIGSMGAI----IN 149 Query: 858 RVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVV 1037 R+ + G G RT N ++ I +S Sbjct: 150 RIFKSKKMPGHMGNAKRTIQNLEIIAIDQS------------------------------ 179 Query: 1038 KGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 1142 + ++IKG GPK V ++Q++ +S+ A+E Sbjct: 180 -NNIMLIKGSIPGPKNSFVQIKQNVKGMSSKQAVE 213
>Q3ZBX6:RM03_BOVIN Mitochondrial 39S ribosomal protein L3 - Bos taurus (Bovine)| Length = 348 Score = 42.4 bits (98), Expect = 0.005 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 5/84 (5%) Frame = +3 Query: 702 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 866 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I ARV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAISTGDVARVW 252 Query: 867 YTVARAGQNGYHHRTEMNKKVYKI 938 GQ G RT KV++I Sbjct: 253 PGTKMPGQLGNVDRTAFGLKVWRI 276
>Q8R7V4:RL3_THETN 50S ribosomal protein L3 - Thermoanaerobacter tengcongensis| Length = 210 Score = 42.4 bits (98), Expect = 0.005 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGA-WH 851 E+ V+ +F+ + +D+ G++KGKG+ GV+ R+G R P K H R+V +GA Sbjct: 96 EIKVD-IFKPGDRVDVTGISKGKGFAGVIKRYGARRGPMSHGSKYH---RRVGSMGATTD 151 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKI 938 P R G+ G T N +V K+ Sbjct: 152 PGRTFKGKKMPGRMGSDRVTIQNLEVVKV 180
>P60453:RL3_CORDI 50S ribosomal protein L3 - Corynebacterium diphtheriae| Length = 218 Score = 42.4 bits (98), Expect = 0.005 Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 3/88 (3%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HP 854 ++V VE +F+ +D+ G TKGKGY G + R G R+V IGA P Sbjct: 99 QDVTVE-IFEGINFVDVTGTTKGKGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATP 157 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 RV AG+ G T N KV KI Sbjct: 158 GRVFKGTRMAGRMGSDRVTTQNLKVQKI 185
>P18665:RM03_RAT Mitochondrial 39S ribosomal protein L3 - Rattus norvegicus (Rat)| Length = 347 Score = 42.0 bits (97), Expect = 0.006 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 12/102 (11%) Frame = +3 Query: 702 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 866 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I ARV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252 Query: 867 YTVARAGQNGYHHRTEMNKKVYKIGK-------SGQESHEAC 971 G+ G +RT KV+++ +G H C Sbjct: 253 PGTKMPGKMGNQNRTVYGLKVWRVNTKHNIIYVNGSVGHRNC 294
>P09001:RM03_HUMAN Mitochondrial 39S ribosomal protein L3 - Homo sapiens (Human)| Length = 348 Score = 42.0 bits (97), Expect = 0.006 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Frame = +3 Query: 702 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 866 A F+ + +D+ T GKG++GV+ RWG P KTH R+ + RV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAVATGDIGRVW 252 Query: 867 YTVARAGQNGYHHRTEMNKKVYKI 938 G+ G +RTE KV++I Sbjct: 253 PGTKMPGKMGNIYRTEYGLKVWRI 276
>Q6A6M6:RL3_PROAC 50S ribosomal protein L3 - Propionibacterium acnes| Length = 223 Score = 42.0 bits (97), Expect = 0.006 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%) Frame = +3 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTR-- 779 + HL+E++ AD +Y +E+ + VF + + +D+ G +KGKG GV+ R Sbjct: 82 RRHLVELRT-----ADASEYT---LGQEIAAD-VFSESDFVDVTGTSKGKGTAGVMKRHG 132 Query: 780 WGVTRLPRKTHRGLRKVACIGAWH-PARVSYTVARAGQNGYHHRTEMNKKVYKI 938 +G R HR R IG P +V + AG+ G T N +V+ + Sbjct: 133 FGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186
>Q9XD36:RL3_LEPIN 50S ribosomal protein L3 - Leptospira interrogans| Length = 206 Score = 42.0 bits (97), Expect = 0.006 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 8/136 (5%) Frame = +3 Query: 561 IAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKE------VPVEAVFQKDE 722 +A I++++ K +K HL + G KV ++ F + ++ VF + Sbjct: 51 LAFQDIKEIQTSKAEKNHLAK----AGLGPKKVLKEFRSFGDSPTAGSVLKIQDVFAVSD 106 Query: 723 MIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSYTVARAGQNG 896 ++ + GV+KG+GY+GVV R G P R R +GA P+RV V G+ G Sbjct: 107 VVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTG 166 Query: 897 YHHRTEMNKKVYKIGK 944 T N KV +I + Sbjct: 167 SQKTTVRNLKVVRINE 182
>Q72NG1:RL3_LEPIC 50S ribosomal protein L3 - Leptospira interrogans serogroup| Icterohaemorrhagiae serovar copenhageni Length = 206 Score = 42.0 bits (97), Expect = 0.006 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 8/136 (5%) Frame = +3 Query: 561 IAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKE------VPVEAVFQKDE 722 +A I++++ K +K HL + G KV ++ F + ++ VF + Sbjct: 51 LAFQDIKEIQTSKAEKNHLAK----AGLGPKKVLKEFRSFGDSPTAGSVLKIQDVFAVSD 106 Query: 723 MIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSYTVARAGQNG 896 ++ + GV+KG+GY+GVV R G P R R +GA P+RV V G+ G Sbjct: 107 VVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTG 166 Query: 897 YHHRTEMNKKVYKIGK 944 T N KV +I + Sbjct: 167 SQKTTVRNLKVVRINE 182
>Q99N95:RM03_MOUSE Mitochondrial 39S ribosomal protein L3 - Mus musculus (Mouse)| Length = 348 Score = 41.6 bits (96), Expect = 0.008 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Frame = +3 Query: 702 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 866 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I ARV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252 Query: 867 YTVARAGQNGYHHRTEMNKKVYKI 938 G+ G +RT KV+++ Sbjct: 253 PGTKMPGRMGNQNRTVYGLKVWRV 276
>Q8ETY2:RL3_OCEIH 50S ribosomal protein L3 - Oceanobacillus iheyensis| Length = 209 Score = 41.6 bits (96), Expect = 0.008 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPA 857 +E+ V+ +F+ E ID+ G +KGKG++GV+ R G R P TH R +G P Sbjct: 95 QEIKVD-IFESGEKIDVTGTSKGKGFQGVIKRHGQQRGP-TTHGSHFHRAPGAMGVIDPM 152 Query: 858 RVSYTVARAGQNGYHHRTEMNKKVYKI 938 RV G G T N +V + Sbjct: 153 RVFKGKKLPGHMGSEQVTIQNLEVVSV 179
>Q8CWV8:RL3_STRR6 50S ribosomal protein L3 - Streptococcus pneumoniae (strain ATCC| BAA-255 / R6) Length = 208 Score = 41.2 bits (95), Expect = 0.011 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 1/143 (0%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ VE F +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 EITVET-FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKG 1043 AG+ G T N +V ++ V + Sbjct: 153 FKGKNLAGRMGGDRVTIQNLEVVQV-------------------------------VPEK 181 Query: 1044 DYLMIKGCCVGPKKRVVTLRQSL 1112 + ++IKG G KK ++T++ ++ Sbjct: 182 NVILIKGNVPGAKKSLITIKSAV 204
>Q97SV5:RL3_STRPN 50S ribosomal protein L3 - Streptococcus pneumoniae| Length = 208 Score = 41.2 bits (95), Expect = 0.011 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 1/143 (0%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 863 E+ VE F +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 94 EITVET-FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 152 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKG 1043 AG+ G T N +V ++ V + Sbjct: 153 FKGKNLAGRMGGDRVTIQNLEVVQV-------------------------------VPEK 181 Query: 1044 DYLMIKGCCVGPKKRVVTLRQSL 1112 + ++IKG G KK ++T++ ++ Sbjct: 182 NVILIKGNVPGAKKSLITIKSAV 204
>Q8EUB3:RL3_MYCPE 50S ribosomal protein L3 - Mycoplasma penetrans| Length = 310 Score = 41.2 bits (95), Expect = 0.011 Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 6/218 (2%) Frame = +3 Query: 510 IQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNG--GTIADKVDYGYKFFE 683 + L+ + +K + + QI + K K +K + +I+ + T + GY + Sbjct: 33 VVLENKTQEKNGYVATKVGFQQIEEKKLNKPQKGYFKKIKTDAFKHTKEFRNVSGYNVGD 92 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 863 K + V+ +F + +D +TKGKG+ G + RW P GA +P R Sbjct: 93 K-ILVD-IFNSGDKVDAQAITKGKGFTGAIKRWNFKVGPLGH----------GAGYPHRY 140 Query: 864 --SYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVV 1037 S + R G G R +K+ SG HE T + T I + Sbjct: 141 QGSISFGRGGSQG--QRVPKGQKM-----SGHYGHELVTISNLTVVSIE----------L 183 Query: 1038 KGDYLMIKGCCVGPKKRVVTLRQSL--LKQTSRLALED 1145 + + +++KG GP +V L+ ++ KQ + L D Sbjct: 184 EKNLILVKGSVPGPVNSLVLLKTTVKSKKQVDPIKLSD 221
>Q2L2G0:RL3_BORA1 50S ribosomal protein L3 - Bordetella avium (strain 197N)| Length = 233 Score = 41.2 bits (95), Expect = 0.011 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Frame = +3 Query: 690 VPVEAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 860 + VE+VF+ + +D+ G T GKG+ G + R +G R R R IG A P R Sbjct: 113 IAVESVFEAGQQVDVTGTTIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 + AG G RT N V ++ Sbjct: 173 IFPGKRMAGHLGDVTRTVQNLDVVRV 198
>Q73PN1:RL3_TREDE 50S ribosomal protein L3 - Treponema denticola| Length = 208 Score = 40.8 bits (94), Expect = 0.014 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 8/98 (8%) Frame = +3 Query: 669 YKFFEKEVPVE-----AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRK 827 ++ F+KEV V F+K +DI ++KGKG++GV+ RWG R +H + R+ Sbjct: 81 FRDFDKEVAVGDKLGVEAFEKVSYLDITAISKGKGFQGVMKRWGYGG-GRASHGSKFHRE 139 Query: 828 VACIG-AWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 G P R G+ G+ T N ++ KI Sbjct: 140 AGSTGHCTTPGRSFKNTTMPGRMGFDKVTVQNLQIVKI 177
>Q67JU3:RL3_SYMTH 50S ribosomal protein L3 - Symbiobacterium thermophilum| Length = 216 Score = 40.8 bits (94), Expect = 0.014 Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 4/140 (2%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYT 872 +F + E++D+ G+++GKG+ G V RW R P K H R+ +G ARV Sbjct: 101 IFAEGELVDVTGISRGKGFAGGVKRWNFNRGPSSHGSKYH---RRPGSLGQRRWARVPKG 157 Query: 873 VARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYL 1052 G+ G T + +V K+ EK++ + Sbjct: 158 RKLPGRLGGERVTVLGLRVVKVD---------------PEKNL----------------I 186 Query: 1053 MIKGCCVGPKKRVVTLRQSL 1112 +IKG G K ++T+R S+ Sbjct: 187 LIKGAVPGAKGSLITIRDSV 206
>Q4AAE0:RL3_MYCHJ 50S ribosomal protein L3 - Mycoplasma hyopneumoniae (strain J / ATCC| 25934 / NCTC 10110) Length = 230 Score = 40.8 bits (94), Expect = 0.014 Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 5/144 (3%) Frame = +3 Query: 702 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG-----LRKVACIGAWHPARVS 866 ++F E +D+ G +KGKG+ G + R+ PR G +R+ +G +V Sbjct: 97 SIFSPGEFVDVTGTSKGKGFAGTIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVV 156 Query: 867 YTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGD 1046 + G+ G+ T+ + ++ K+ K + + Sbjct: 157 KGMTMPGRLGHEKVTKQSLEIIKVDK-------------------------------ENN 185 Query: 1047 YLMIKGCCVGPKKRVVTLRQSLLK 1118 L++KG GPKK + ++ ++ K Sbjct: 186 LLVLKGSVPGPKKSFLVIKSAIKK 209
>Q4A8H1:RL3_MYCH7 50S ribosomal protein L3 - Mycoplasma hyopneumoniae (strain 7448)| Length = 230 Score = 40.8 bits (94), Expect = 0.014 Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 5/144 (3%) Frame = +3 Query: 702 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG-----LRKVACIGAWHPARVS 866 ++F E +D+ G +KGKG+ G + R+ PR G +R+ +G +V Sbjct: 97 SIFSPGEFVDVTGTSKGKGFAGTIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVV 156 Query: 867 YTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGD 1046 + G+ G+ T+ + ++ K+ K + + Sbjct: 157 KGMTMPGRLGHEKVTKQSLEIIKVDK-------------------------------ENN 185 Query: 1047 YLMIKGCCVGPKKRVVTLRQSLLK 1118 L++KG GPKK + ++ ++ K Sbjct: 186 LLVLKGSVPGPKKSFLVIKSAIKK 209
>Q601L5:RL3_MYCH2 50S ribosomal protein L3 - Mycoplasma hyopneumoniae (strain 232)| Length = 230 Score = 40.8 bits (94), Expect = 0.014 Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 5/144 (3%) Frame = +3 Query: 702 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG-----LRKVACIGAWHPARVS 866 ++F E +D+ G +KGKG+ G + R+ PR G +R+ +G +V Sbjct: 97 SIFSPGEFVDVTGTSKGKGFAGTIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVV 156 Query: 867 YTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGD 1046 + G+ G+ T+ + ++ K+ K + + Sbjct: 157 KGMTMPGRLGHEKVTKQSLEIIKVDK-------------------------------ENN 185 Query: 1047 YLMIKGCCVGPKKRVVTLRQSLLK 1118 L++KG GPKK + ++ ++ K Sbjct: 186 LLVLKGSVPGPKKSFLVIKSAIKK 209
>Q8NT09:RL3_CORGL 50S ribosomal protein L3 - Corynebacterium glutamicum| (Brevibacterium flavum) Length = 218 Score = 40.4 bits (93), Expect = 0.018 Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 3/88 (3%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHP 854 ++V VE +F + +D+ G TKGKGY G + R G R+V IG A P Sbjct: 99 QDVTVE-IFNDIKFVDVTGTTKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATP 157 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 R+ AG+ G T N KV KI Sbjct: 158 GRIFKGKRMAGRMGNDRVTTQNLKVQKI 185
>Q9Z9L4:RL3_BACHD 50S ribosomal protein L3 - Bacillus halodurans| Length = 209 Score = 40.4 bits (93), Expect = 0.018 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 1/144 (0%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 860 +E+ V+A F + +++D+ G +KGKG+ G + R R P R R+ +G P R Sbjct: 95 QEIKVDA-FAEGDIVDVTGTSKGKGFAGAIKRHNQARGPMSHGSRYHRRPGSMGPVDPNR 153 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVK 1040 V A G+ G T N ++ K+ + Sbjct: 154 VFKGKALPGRMGGEQVTVQNLEIIKVD-------------------------------AE 182 Query: 1041 GDYLMIKGCCVGPKKRVVTLRQSL 1112 + L++KG G KK VT+R ++ Sbjct: 183 RNLLLVKGNVPGAKKSYVTVRSAI 206
>Q5NQ64:RL3_ZYMMO 50S ribosomal protein L3 - Zymomonas mobilis| Length = 242 Score = 39.7 bits (91), Expect = 0.031 Identities = 38/128 (29%), Positives = 51/128 (39%), Gaps = 15/128 (11%) Frame = +3 Query: 591 GLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAV-----------FQKDEMIDII 737 G KA + V G +V+ K E V +AV F +++DI Sbjct: 52 GAGSAKAKNVTKPVRGHFAKAEVELKAKLVEFPVSEDAVLEVGTSISADHFIAGQLVDIS 111 Query: 738 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNGYHH 905 G T+GKG+ G + RWG L R TH G+ P RV AG G Sbjct: 112 GQTQGKGFAGAMKRWGFGGL-RATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQ 170 Query: 906 RTEMNKKV 929 RT+ N +V Sbjct: 171 RTQQNLEV 178
>P52860:RL3_THETH 50S ribosomal protein L3 - Thermus thermophilus| Length = 206 Score = 39.7 bits (91), Expect = 0.031 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 875 +F+ E +D+ G +KG+G+ GV+ RW P H+ R IG P RV Sbjct: 95 IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 AG G T MN +V + Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175
>Q5SHN8:RL3_THET8 50S ribosomal protein L3 - Thermus thermophilus (strain HB8 / ATCC| 27634 / DSM 579) Length = 206 Score = 39.7 bits (91), Expect = 0.031 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 875 +F+ E +D+ G +KG+G+ GV+ RW P H+ R IG P RV Sbjct: 95 IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 AG G T MN +V + Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175
>Q72I04:RL3_THET2 50S ribosomal protein L3 - Thermus thermophilus (strain HB27 / ATCC| BAA-163 / DSM 7039) Length = 206 Score = 39.7 bits (91), Expect = 0.031 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 875 +F+ E +D+ G +KG+G+ GV+ RW P H+ R IG P RV Sbjct: 95 IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 AG G T MN +V + Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175
>O52332:RL3_MYCGA 50S ribosomal protein L3 - Mycoplasma gallisepticum| Length = 236 Score = 39.7 bits (91), Expect = 0.031 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Frame = +3 Query: 597 KQKKAHLMEIQVNGGTIADKVD--YGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGV 770 K + H + N ++V GYK + + VE +FQ+ +++D+ TKG+G+ G Sbjct: 62 KPQLGHFKKANTNNYKYLEEVRGMVGYKIGDL-LKVEELFQEGQVVDVQARTKGRGFTGA 120 Query: 771 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK 926 + RW ++ K H GA +P R +V +AG+ G + M K Sbjct: 121 IKRWNF-KIGSKGH---------GAGYPHRFQGSV-QAGRGGSQAQRVMKGK 161
>Q6F1Z4:RL3_MESFL 50S ribosomal protein L3 - Mesoplasma florum (Acholeplasma florum)| Length = 238 Score = 39.7 bits (91), Expect = 0.031 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHPARVSYT 872 +F+ + +D+ G++KGKG+ G + R +R P HRG+ + I R+ + Sbjct: 99 IFETGQYVDVTGISKGKGFAGAIKRHNYSRGPMAHGSGYHRGIGSMGAI----INRIFKS 154 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 AG G+ RT N +V I Sbjct: 155 KKMAGHMGHVKRTVQNLEVIAI 176
>P60454:RL3_GEOSL 50S ribosomal protein L3 - Geobacter sulfurreducens| Length = 210 Score = 39.7 bits (91), Expect = 0.031 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Frame = +3 Query: 708 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG-AWHPARVSYTVA 878 F+ E ID+ G + GKG++GV+ RWG R R +H R IG + +P+RV Sbjct: 102 FEVGEYIDVTGTSIGKGFQGVIKRWGF-RGGRSSHGSCFHRAPGSIGSSAYPSRVFKNKK 160 Query: 879 RAGQNGYHHRTEMNKKVYKI 938 GQ G T +V ++ Sbjct: 161 MPGQLGNERVTVQRLQVVRV 180
>Q4JT47:RL3_CORJK 50S ribosomal protein L3 - Corynebacterium jeikeium (strain K411)| Length = 218 Score = 39.7 bits (91), Expect = 0.031 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Frame = +3 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWG 785 + H+ EI+V AD Y ++V V+ +F + +D+ G TKGKGY G + R G Sbjct: 81 RRHVAEIRV-----ADASSYEVG---QDVTVD-IFNDVKFVDVTGTTKGKGYAGGMKRHG 131 Query: 786 VT--RLPRKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 R+V IG A P RV AG+ G T+ N K+ K+ Sbjct: 132 FAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKLAKV 185
>Q8D212:RL3_WIGBR 50S ribosomal protein L3 - Wigglesworthia glossinidia brevipalpis| Length = 215 Score = 39.3 bits (90), Expect = 0.040 Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Frame = +3 Query: 621 EIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 800 ++++ G KVD KF+ +V F ++I G++KGKG+ G + RW Sbjct: 72 KVELGRGLWEFKVDKNSKFYVGQVLSINTFININKVNITGISKGKGFSGTMKRWNFHGQD 131 Query: 801 RKTHRGL--RKVACIGA-WHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 L R IG P +V +G GY+ T N V KI Sbjct: 132 ASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLGYNKNTVKNLFVVKI 180
>Q2G8Y0:RL3_NOVAD 50S ribosomal protein L3 - Novosphingobium aromaticivorans (strain| DSM 12444) Length = 251 Score = 39.3 bits (90), Expect = 0.040 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Frame = +3 Query: 708 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTV 875 F + +DI G T+GKG++G + RWG + R TH G+ P RV Sbjct: 102 FVPGQYVDITGQTQGKGFQGAMKRWGFGGM-RATHGVSISHRAHGSTGNRQDPGRVFKNK 160 Query: 876 ARAGQNGYHHRTEMNKKVYK 935 AG G RT+ N +V + Sbjct: 161 KMAGHMGDRQRTQQNLEVVR 180
>Q5Z1W3:RL3_NOCFA 50S ribosomal protein L3 - Nocardia farcinica| Length = 221 Score = 39.3 bits (90), Expect = 0.040 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 869 VF++ +D+ G +KGKGY G + R G + + HR R + G P RV Sbjct: 108 VFEEGSYVDVTGTSKGKGYAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPGRVFK 165 Query: 870 TVARAGQNGYHHRTEMNKKVYKI 938 + AG+ G T N V+K+ Sbjct: 166 GMRMAGRMGNDRVTTQNLSVHKV 188
>P60444:RL3_NEIMB 50S ribosomal protein L3 - Neisseria meningitidis serogroup B| Length = 214 Score = 39.3 bits (90), Expect = 0.040 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 3/87 (3%) Frame = +3 Query: 702 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 872 ++F+ +++D+ G +KGKG+ G + R +G R R R IG A P RV Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161 Query: 873 VARAGQNGYHHRTEMNKKVYKIGKSGQ 953 AGQ G T +V ++ Q Sbjct: 162 KRMAGQYGNTKATVQKLEVVRVDAERQ 188
>P60443:RL3_NEIMA 50S ribosomal protein L3 - Neisseria meningitidis serogroup A| Length = 214 Score = 39.3 bits (90), Expect = 0.040 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 3/87 (3%) Frame = +3 Query: 702 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 872 ++F+ +++D+ G +KGKG+ G + R +G R R R IG A P RV Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161 Query: 873 VARAGQNGYHHRTEMNKKVYKIGKSGQ 953 AGQ G T +V ++ Q Sbjct: 162 KRMAGQYGNTKATVQKLEVVRVDAERQ 188
>Q5F5S7:RL3_NEIG1 50S ribosomal protein L3 - Neisseria gonorrhoeae (strain ATCC| 700825 / FA 1090) Length = 214 Score = 39.3 bits (90), Expect = 0.040 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 3/87 (3%) Frame = +3 Query: 702 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 872 ++F+ +++D+ G +KGKG+ G + R +G R R R IG A P RV Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161 Query: 873 VARAGQNGYHHRTEMNKKVYKIGKSGQ 953 AGQ G T +V ++ Q Sbjct: 162 KRMAGQYGNTKATVQKLEVVRVDAERQ 188
>Q39Y06:RL3_GEOMG 50S ribosomal protein L3 - Geobacter metallireducens (strain GS-15| / ATCC 53774 / DSM 7210) Length = 210 Score = 39.3 bits (90), Expect = 0.040 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG--AWHPARVSYT 872 +F + +D+ G + GKG++GV+ RWG R R +H R IG AW P+RV Sbjct: 101 IFAPGDYVDVTGTSIGKGFQGVIKRWGF-RGGRSSHGSCFHRAPGSIGSSAW-PSRVFKN 158 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 GQ G T +V ++ Sbjct: 159 KKMPGQLGNERVTVQRLQVVRV 180
>Q5L720:RL3_CHLAB 50S ribosomal protein L3 - Chlamydophila abortus| Length = 221 Score = 39.3 bits (90), Expect = 0.040 Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 2/137 (1%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 878 VF+ ID+ GV+KGKG++GV+ R+G P+ G R IG P R Sbjct: 111 VFESVSSIDVSGVSKGKGFQGVMKRFGFRGGPQSHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 879 RAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMI 1058 R G + T N +V KI EK + L++ Sbjct: 171 RPSHMGTVNVTVKNLEVIKID---------------LEKKV----------------LLV 199 Query: 1059 KGCCVGPKKRVVTLRQS 1109 KG GP+ VV +R+S Sbjct: 200 KGAIPGPRGSVVVVRRS 216
>Q9LRN8:RK3B_ARATH 50S ribosomal protein L3-2, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 324 Score = 39.3 bits (90), Expect = 0.040 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%) Frame = +3 Query: 708 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-----THRGLRKVACIGAWHPARVSYT 872 F + +D+ G+T+GKG++G + R G + +P +HR A P +V Sbjct: 176 FVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDA--PGKVFKG 233 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 AG+ G RT N VYKI Sbjct: 234 RKMAGRMGADQRTVKNVWVYKI 255
>P60450:RL3_STAAW 50S ribosomal protein L3 - Staphylococcus aureus (strain MW2)| Length = 220 Score = 38.9 bits (89), Expect = 0.052 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWH 851 +EV V+ F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASD 159 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYG 1031 +RV G+ G + T N +V ++ TE + Sbjct: 160 ASRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV---------- 194 Query: 1032 VVKGDYLMIKGCCVGPKKRVVTLRQSLLK 1118 +++KG GPKK +V +R S+ K Sbjct: 195 ------ILVKGNVPGPKKGLVEIRTSIKK 217
>Q6G771:RL3_STAAS 50S ribosomal protein L3 - Staphylococcus aureus (strain MSSA476)| Length = 220 Score = 38.9 bits (89), Expect = 0.052 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWH 851 +EV V+ F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASD 159 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYG 1031 +RV G+ G + T N +V ++ TE + Sbjct: 160 ASRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV---------- 194 Query: 1032 VVKGDYLMIKGCCVGPKKRVVTLRQSLLK 1118 +++KG GPKK +V +R S+ K Sbjct: 195 ------ILVKGNVPGPKKGLVEIRTSIKK 217
>Q6GEI3:RL3_STAAR 50S ribosomal protein L3 - Staphylococcus aureus (strain MRSA252)| Length = 220 Score = 38.9 bits (89), Expect = 0.052 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWH 851 +EV V+ F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASD 159 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYG 1031 +RV G+ G + T N +V ++ TE + Sbjct: 160 ASRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV---------- 194 Query: 1032 VVKGDYLMIKGCCVGPKKRVVTLRQSLLK 1118 +++KG GPKK +V +R S+ K Sbjct: 195 ------ILVKGNVPGPKKGLVEIRTSIKK 217
>P60449:RL3_STAAN 50S ribosomal protein L3 - Staphylococcus aureus (strain N315)| Length = 220 Score = 38.9 bits (89), Expect = 0.052 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWH 851 +EV V+ F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASD 159 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYG 1031 +RV G+ G + T N +V ++ TE + Sbjct: 160 ASRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV---------- 194 Query: 1032 VVKGDYLMIKGCCVGPKKRVVTLRQSLLK 1118 +++KG GPKK +V +R S+ K Sbjct: 195 ------ILVKGNVPGPKKGLVEIRTSIKK 217
>P60448:RL3_STAAM 50S ribosomal protein L3 - Staphylococcus aureus (strain Mu50 / ATCC| 700699) Length = 220 Score = 38.9 bits (89), Expect = 0.052 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWH 851 +EV V+ F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASD 159 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYG 1031 +RV G+ G + T N +V ++ TE + Sbjct: 160 ASRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV---------- 194 Query: 1032 VVKGDYLMIKGCCVGPKKRVVTLRQSLLK 1118 +++KG GPKK +V +R S+ K Sbjct: 195 ------ILVKGNVPGPKKGLVEIRTSIKK 217
>Q5HDV8:RL3_STAAC 50S ribosomal protein L3 - Staphylococcus aureus (strain COL)| Length = 209 Score = 38.9 bits (89), Expect = 0.052 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWH 851 +EV V+ F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 92 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASD 148 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYG 1031 +RV G+ G + T N +V ++ TE + Sbjct: 149 ASRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV---------- 183 Query: 1032 VVKGDYLMIKGCCVGPKKRVVTLRQSLLK 1118 +++KG GPKK +V +R S+ K Sbjct: 184 ------ILVKGNVPGPKKGLVEIRTSIKK 206
>Q2YYP6:RL3_STAAB 50S ribosomal protein L3 - Staphylococcus aureus (strain bovine| RF122) Length = 220 Score = 38.9 bits (89), Expect = 0.052 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWH 851 +EV V+ F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASD 159 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYG 1031 +RV G+ G + T N +V ++ TE + Sbjct: 160 ASRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV---------- 194 Query: 1032 VVKGDYLMIKGCCVGPKKRVVTLRQSLLK 1118 +++KG GPKK +V +R S+ K Sbjct: 195 ------ILVKGNVPGPKKGLVEIRTSIKK 217
>Q2FEN9:RL3_STAA3 50S ribosomal protein L3 - Staphylococcus aureus (strain USA300)| Length = 220 Score = 38.9 bits (89), Expect = 0.052 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWH 851 +EV V+ F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASD 159 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYG 1031 +RV G+ G + T N +V ++ TE + Sbjct: 160 ASRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV---------- 194 Query: 1032 VVKGDYLMIKGCCVGPKKRVVTLRQSLLK 1118 +++KG GPKK +V +R S+ K Sbjct: 195 ------ILVKGNVPGPKKGLVEIRTSIKK 217
>P47397:RL3_MYCGE 50S ribosomal protein L3 - Mycoplasma genitalium| Length = 257 Score = 38.9 bits (89), Expect = 0.052 Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 8/171 (4%) Frame = +3 Query: 666 GYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA 845 G++ +K P E +F+ E +D+ +TKG+G+ G + RW P GA Sbjct: 89 GFELGKKITPQE-LFKIGEYVDVTSLTKGRGFTGAIKRWNFKIGPLGH----------GA 137 Query: 846 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK-SGQESHEACT-------EFDRTEKDI 1001 +P R +V +AG+ G ++V+K K SG HE T FD K Sbjct: 138 GYPHRFQGSV-QAGRGG-----SSAQRVFKGKKMSGHYGHEQVTIQNLFIVGFDEINK-- 189 Query: 1002 TPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 1154 +++ G GP+ +V ++ + K+T + ++DIKL Sbjct: 190 ---------------LVLVSGAIAGPEGGIVLIK-TAKKKTGK--IKDIKL 222
>Q9RXK2:RL3_DEIRA 50S ribosomal protein L3 - Deinococcus radiodurans| Length = 211 Score = 38.9 bits (89), Expect = 0.052 Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 10/88 (11%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHR-----GLRKVACIGAWHP 854 +F + E ID G +KGKG +GV+ RW P +K HR G RK P Sbjct: 95 IFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKT-------P 147 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 RV AG G T N +V +I Sbjct: 148 GRVYKGKRMAGHMGMERVTVQNLEVVEI 175
>Q8FS80:RL3_COREF 50S ribosomal protein L3 - Corynebacterium efficiens| Length = 218 Score = 38.9 bits (89), Expect = 0.052 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 3/88 (3%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHP 854 ++V VE +F + +D+ G +KGKGY G + R G R+V IG A P Sbjct: 99 QDVTVE-IFNDVKFVDVTGTSKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATP 157 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 R+ AG+ G T N KV KI Sbjct: 158 GRIFKGKRMAGRMGNDRVTTQNLKVQKI 185
>Q7VTD3:RL3_BORPE 50S ribosomal protein L3 - Bordetella pertussis| Length = 233 Score = 38.9 bits (89), Expect = 0.052 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Frame = +3 Query: 690 VPVEAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 860 + VE+VF+ + +D+ G + GKG+ G + R +G R R R IG A P R Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 + +G G RT N V ++ Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198
>Q7W2F6:RL3_BORPA 50S ribosomal protein L3 - Bordetella parapertussis| Length = 233 Score = 38.9 bits (89), Expect = 0.052 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Frame = +3 Query: 690 VPVEAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 860 + VE+VF+ + +D+ G + GKG+ G + R +G R R R IG A P R Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 + +G G RT N V ++ Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198
>Q7WRC5:RL3_BORBR 50S ribosomal protein L3 - Bordetella bronchiseptica (Alcaligenes| bronchisepticus) Length = 233 Score = 38.9 bits (89), Expect = 0.052 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Frame = +3 Query: 690 VPVEAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 860 + VE+VF+ + +D+ G + GKG+ G + R +G R R R IG A P R Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 + +G G RT N V ++ Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198
>Q87T13:RL3_VIBPA 50S ribosomal protein L3 - Vibrio parahaemolyticus| Length = 209 Score = 38.5 bits (88), Expect = 0.068 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-P 854 E+ VE +F + + +D+ G +KGKG++G V RW R TH R IG P Sbjct: 95 ELTVE-LFNETKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTP 152 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 RV AG G T N ++ ++ Sbjct: 153 GRVFKGKKMAGHMGAERVTTQNLEIVRV 180
>Q3B6G1:RL3_PELLD 50S ribosomal protein L3 - Pelodictyon luteolum (strain DSM 273)| (Chlorobium luteolum (strain DSM 273)) Length = 209 Score = 38.5 bits (88), Expect = 0.068 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 3/86 (3%) Frame = +3 Query: 690 VPVEAVFQKDEMIDIIGVTKGKGYEGVVTR---WGVTRLPRKTHRGLRKVACIGAWHPAR 860 V VE+ F++ E+++++GV+KGKG+ GVV R G +R ++ R + G+ P+R Sbjct: 97 VSVES-FKEGEIVNVLGVSKGKGFAGVVKRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSR 155 Query: 861 VSYTVARAGQNGYHHRTEMNKKVYKI 938 G+ G + T N +V KI Sbjct: 156 TFKGTRMGGRMGSDNVTVRNLQVVKI 181
>Q74L88:RL3_LACJO 50S ribosomal protein L3 - Lactobacillus johnsonii| Length = 209 Score = 38.5 bits (88), Expect = 0.068 Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 3/87 (3%) Frame = +3 Query: 561 IAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKV-DYGYKFFE--KEVPVEAVFQKDEMID 731 + + +R++ K K H + + + ++ D K +E E+ V++ F + +++D Sbjct: 51 VGYQDMREVLSNKPAKGHAAKAKTSPKRFIREIRDVELKDYEVGSEITVDS-FSEGDVVD 109 Query: 732 IIGVTKGKGYEGVVTRWGVTRLPRKTH 812 + G T+G G +G + RWG +R P +TH Sbjct: 110 VTGTTRGHGTQGNIKRWGQSRGP-ETH 135
>Q6LVB6:RL3_PHOPR 50S ribosomal protein L3 - Photobacterium profundum (Photobacterium| sp. (strain SS9)) Length = 209 Score = 38.1 bits (87), Expect = 0.089 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWH-PA 857 E+ VE +F + + +D+ G +KGKG++GV+ RW + L R IG P Sbjct: 95 ELNVE-LFNEVKKVDVTGTSKGKGFQGVIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPG 153 Query: 858 RVSYTVARAGQNGYHHRTEMNKKVYKI 938 RV AG G T N ++ ++ Sbjct: 154 RVFKGKKMAGHMGAERVTTQNLEIVRV 180
>Q82X88:RL3_NITEU 50S ribosomal protein L3 - Nitrosomonas europaea| Length = 215 Score = 38.1 bits (87), Expect = 0.089 Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 8/156 (5%) Frame = +3 Query: 495 AGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIAD--KVDYG 668 +G + +Q++ E+ Y+ + + RK + K H + V GT+ +VD+ Sbjct: 31 SGNRVVQVKTEEKDGYSAVQLTQGYR--RKNRITKALSGHFSQAGVEAGTVIKEFRVDHD 88 Query: 669 YKFFEK---EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVA 833 K E+ VE +F+ +D+ G++ GKGY G + R + +R R Sbjct: 89 IGSDIKIGSEISVE-LFEVGSKVDVCGISIGKGYAGTIKRHNFSSSRASHGNSRSHNVPG 147 Query: 834 CIG-AWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 IG A P RV G G T N +V ++ Sbjct: 148 SIGMAQDPGRVFPGKKMTGHLGNAQCTVQNIEVVRV 183
>Q2S912:RL3_HAHCH 50S ribosomal protein L3 - Hahella chejuensis (strain KCTC 2396)| Length = 212 Score = 38.1 bits (87), Expect = 0.089 Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 8/122 (6%) Frame = +3 Query: 597 KQKKAHLMEIQVNGGTIA-----DKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGY 761 K H + V G + D D EV V +F+ + +D+ G +KGKG+ Sbjct: 63 KPMAGHFAKAGVEAGRVVCEFTLDATDSAEYKVGDEVSV-TIFEAGQKVDVSGRSKGKGF 121 Query: 762 EGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNGYHHRTEMNKKVY 932 GV+ RW + L R IG P RV AGQ G + T KV Sbjct: 122 AGVIKRWNFSTQDATHGNSLSHRAPGSIGQNQSPGRVFKGKKMAGQMGNKNVTVQTLKVV 181 Query: 933 KI 938 ++ Sbjct: 182 RV 183
>Q8K950:RL3_BUCAP 50S ribosomal protein L3 - Buchnera aphidicola subsp. Schizaphis| graminum Length = 209 Score = 38.1 bits (87), Expect = 0.089 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 6/151 (3%) Frame = +3 Query: 513 QLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQV--NGGTIADKVDYGYKFFEK 686 Q++ K KY I ++ ++K K + H ++ V G +++ KF Sbjct: 36 QIRNIKTDKYYAIQVTTGLKKLNRLK--KPESGHFLKSGVIPGRGLWEFRINNNEKFQIG 93 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHP 854 + +F + +D+ G++KGKG+ G V RW R TH R IG P Sbjct: 94 QSIKINIFNDIKKVDVTGISKGKGFSGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTP 152 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKIGKS 947 RV AG G + T N + KI ++ Sbjct: 153 GRVFKGKKMAGHLGNNRVTVQNLNIVKIDQN 183
>O80360:RK3_TOBAC 50S ribosomal protein L3, chloroplast precursor - Nicotiana tabacum| (Common tobacco) Length = 259 Score = 38.1 bits (87), Expect = 0.089 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 6/115 (5%) Frame = +3 Query: 612 HLMEIQ---VNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRW 782 HL E + ++G + K+D+G +F++ +++D+ G T GKG++G + R Sbjct: 121 HLQEFRLQSIDGFEVTQKLDFG-----------ELFKEGDLVDVSGTTIGKGFQGGIKRH 169 Query: 783 GVTRLPRKTH--RGLRKVACIGA-WHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 R + TH + R++ IGA P RV G+ G R K+ KI Sbjct: 170 NFKR-GQMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKI 223
>Q7MPI8:RL3_VIBVY 50S ribosomal protein L3 - Vibrio vulnificus (strain YJ016)| Length = 209 Score = 37.7 bits (86), Expect = 0.12 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-P 854 E+ VE +F + + +D+ G +KGKG++G V RW R TH R IG P Sbjct: 95 ELTVE-LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTP 152 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 RV AG G T N ++ ++ Sbjct: 153 GRVFKGKKMAGHMGAERVTTQNLEIVRV 180
>Q8DE39:RL3_VIBVU 50S ribosomal protein L3 - Vibrio vulnificus| Length = 209 Score = 37.7 bits (86), Expect = 0.12 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-P 854 E+ VE +F + + +D+ G +KGKG++G V RW R TH R IG P Sbjct: 95 ELTVE-LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTP 152 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 RV AG G T N ++ ++ Sbjct: 153 GRVFKGKKMAGHMGAERVTTQNLEIVRV 180
>Q9KNY4:RL3_VIBCH 50S ribosomal protein L3 - Vibrio cholerae| Length = 209 Score = 37.7 bits (86), Expect = 0.12 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-P 854 E+ VE +F + + +D+ G +KGKG++G V RW R TH R IG P Sbjct: 95 ELTVE-LFNEVKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTP 152 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 RV AG G T N ++ ++ Sbjct: 153 GRVFKGKKMAGHMGAERVTTQNLEIVRV 180
>P60442:RL3_MYCTU 50S ribosomal protein L3 - Mycobacterium tuberculosis| Length = 217 Score = 37.7 bits (86), Expect = 0.12 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Frame = +3 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTR-- 779 + +L E++++ A + G +E+ E +F +D+ G +KGKG+ G + R Sbjct: 78 RRYLAELRLDDSDAATEYQVG-----QELTAE-IFADGSYVDVTGTSKGKGFAGTMKRHG 131 Query: 780 ---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 G + + HR R + G PARV AG+ G T +N V+K+ Sbjct: 132 FRGQGASHGAQAVHR--RPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVHKV 185
>Q6MSM6:RL3_MYCMS 50S ribosomal protein L3 - Mycoplasma mycoides subsp. mycoides SC| Length = 223 Score = 37.7 bits (86), Expect = 0.12 Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 4/155 (2%) Frame = +3 Query: 690 VPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHPA 857 + V +F E +D+ G++KGKG+ G + R R P HRG+ + I Sbjct: 94 INVSDIFVSGEYVDVTGISKGKGFAGGIKRHNYARGPMAHGSGYHRGIGSMGAI----IN 149 Query: 858 RVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVV 1037 R+ + G G RT N ++ I + Sbjct: 150 RIFKSKKMPGHMGNAKRTIQNLEIIAIDQ------------------------------- 178 Query: 1038 KGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 1142 + ++IKG G K V ++Q++ +S+ A+E Sbjct: 179 PNNIMLIKGSIPGSKNSFVQIKQNIKGMSSKQAVE 213
>P60441:RL3_MYCBO 50S ribosomal protein L3 - Mycobacterium bovis| Length = 217 Score = 37.7 bits (86), Expect = 0.12 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Frame = +3 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTR-- 779 + +L E++++ A + G +E+ E +F +D+ G +KGKG+ G + R Sbjct: 78 RRYLAELRLDDSDAATEYQVG-----QELTAE-IFADGSYVDVTGTSKGKGFAGTMKRHG 131 Query: 780 ---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 G + + HR R + G PARV AG+ G T +N V+K+ Sbjct: 132 FRGQGASHGAQAVHR--RPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVHKV 185
>Q487Z3:RL3_COLP3 50S ribosomal protein L3 - Colwellia psychrerythraea (strain 34H /| ATCC BAA-681) (Vibrio psychroerythus) Length = 212 Score = 37.7 bits (86), Expect = 0.12 Identities = 17/42 (40%), Positives = 27/42 (64%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 812 E+ VE VF +++D+ G +KGKG++G + RW T + TH Sbjct: 98 EITVE-VFNDTKLVDVTGTSKGKGFQGGIKRWNFT-MQHATH 137
>Q661E3:RL3_BORGA 50S ribosomal protein L3 - Borrelia garinii| Length = 206 Score = 37.7 bits (86), Expect = 0.12 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 4/131 (3%) Frame = +3 Query: 573 QIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKG 752 Q + +K ++ KK I++ G D D G E+ V+ VF+ + +D+ G TKG Sbjct: 67 QYKSLKDIEPKK---YVIELKG---LDGYDAG-----DEIKVD-VFKSVKYVDVTGTTKG 114 Query: 753 KGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMN 920 KG++G + R + P K HR L A PAR AG+ G + +T N Sbjct: 115 KGFQGAMKRHNFSGGPSSHGSKFHRHLGGTG--QATTPARTFKGTKMAGRMGGNKQTIQN 172 Query: 921 KKVYKIGKSGQ 953 +V I + + Sbjct: 173 LEVVLIDEENR 183
>Q4A5C1:RL3_MYCS5 50S ribosomal protein L3 - Mycoplasma synoviae (strain 53)| Length = 268 Score = 37.4 bits (85), Expect = 0.15 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG------LRKVACIGAWHPARVS 866 +F E++D+ G +KGKG+ G + R+ + K+H G +R+ +G RV Sbjct: 98 IFSVGELVDVSGTSKGKGFAGAIKRYN-QHIGPKSHGGGGGSQPIRQTGSLGDISGNRVF 156 Query: 867 YTVARAGQNGYHHRTEMNKKVYKI 938 + G G T N +V K+ Sbjct: 157 KGMTMPGHLGSEKATLQNLEVVKV 180
>P75580:RL3_MYCPN 50S ribosomal protein L3 - Mycoplasma pneumoniae| Length = 287 Score = 37.4 bits (85), Expect = 0.15 Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 1/146 (0%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 863 +++ + +FQ E +D+ ++KG+G+ G + RW P GA +P R Sbjct: 94 QQITPQNLFQVGEYVDVSAISKGRGFTGAIKRWNFKIGPLGH----------GAGYPHRF 143 Query: 864 SYTVARAGQNGYHHRTEMNKKVYKIGK-SGQESHEACTEFDRTEKDITPMGGFPHYGVVK 1040 +V +AG+ G ++V+K K SG HE T + + GF ++ Sbjct: 144 QGSV-QAGRGG-----ASAQRVFKGKKMSGHYGHEKVTVQN------LRIVGFDEANML- 190 Query: 1041 GDYLMIKGCCVGPKKRVVTLRQSLLK 1118 +++ G GP+ VV +R + K Sbjct: 191 ---VLVSGAIAGPEGGVVLIRTAKKK 213
>Q252V3:RL3_CHLFF 50S ribosomal protein L3 - Chlamydophila felis (strain Fe/C-56)| Length = 221 Score = 37.4 bits (85), Expect = 0.15 Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 2/137 (1%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 878 VF+ +DI GV+KGKG++GV+ ++G P+ G R IG P R Sbjct: 111 VFEDVSSVDISGVSKGKGFQGVMKKFGFRGGPKTHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 879 RAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMI 1058 R G + T N +V KI EK + L++ Sbjct: 171 RPSHMGAVNVTIKNLEVIKID---------------LEKKV----------------LLV 199 Query: 1059 KGCCVGPKKRVVTLRQS 1109 KG GP+ VV +R+S Sbjct: 200 KGAIPGPRGSVVVVRRS 216
>Q89A68:RL3_BUCBP 50S ribosomal protein L3 - Buchnera aphidicola subsp. Baizongia| pistaciae Length = 214 Score = 37.4 bits (85), Expect = 0.15 Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTV 875 +F + +DIIG +KGKG+ G V RW L R IG P RV Sbjct: 102 LFSNIKKVDIIGTSKGKGFCGTVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGK 161 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 AG G H T N + KI Sbjct: 162 KMAGHLGNHRVTVQNLDIVKI 182
>Q5WLR2:RL3_BACSK 50S ribosomal protein L3 - Bacillus clausii (strain KSM-K16)| Length = 206 Score = 37.4 bits (85), Expect = 0.15 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = +3 Query: 708 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYTVARA 884 F +++D+ G +KGKG++G + R +R P R R+ +G P RV A Sbjct: 100 FAAGDLVDVTGTSKGKGFQGAIKRHNQSRGPMSHGSRYHRRPGSMGPVAPNRVFKGKALP 159 Query: 885 GQNGYHHRTEMNKKVYKI 938 G+ G T N ++ ++ Sbjct: 160 GRMGGEQITMQNLEIVRV 177
>Q3J8R4:RL3_NITOC 50S ribosomal protein L3 - Nitrosococcus oceani (strain ATCC 19707| / NCIMB 11848) Length = 215 Score = 37.0 bits (84), Expect = 0.20 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRW--GVTRLPRKTHRGLRKVACIGAWH-PARVSYTV 875 +F+ + +D+ G+T+G+G+ GVV R+ G R IG P RV Sbjct: 103 LFEVGQKVDVTGITRGRGFAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGK 162 Query: 876 ARAGQNGYHHRTEMNKKVYKIGKSGQ 953 AGQ G RT N ++ +I + Q Sbjct: 163 KMAGQMGNVRRTVQNLELVRIDEGRQ 188
>Q824Q1:RL3_CHLCV 50S ribosomal protein L3 - Chlamydophila caviae| Length = 221 Score = 37.0 bits (84), Expect = 0.20 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 2/137 (1%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 878 V + +DI GV+KGKG++GV+ R+G P+ G R IG P R Sbjct: 111 VLEDISSVDISGVSKGKGFQGVMKRFGFRGGPKTHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 879 RAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMI 1058 R G + T N +V KI EK + L++ Sbjct: 171 RPSHMGTVNVTVKNLEVVKID---------------LEKKV----------------LLV 199 Query: 1059 KGCCVGPKKRVVTLRQS 1109 KG GP+ VV +R+S Sbjct: 200 KGAIPGPRGSVVVIRRS 216
>O83219:RL3_TREPA 50S ribosomal protein L3 - Treponema pallidum| Length = 208 Score = 36.6 bits (83), Expect = 0.26 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIG-AWHPARVSYTV 875 V + +D+ ++KGKG++GVV RWG + R +H + R+ G P R V Sbjct: 98 VLESVRYLDVCALSKGKGFQGVVKRWGFSG-GRSSHGSKFHREAGSTGQCTSPGRTFKNV 156 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 G+ G T N ++ +I Sbjct: 157 KMPGRMGAERVTVQNLRIERI 177
>Q4L8B4:RL3_STAHJ 50S ribosomal protein L3 - Staphylococcus haemolyticus (strain| JCSC1435) Length = 220 Score = 36.6 bits (83), Expect = 0.26 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 4/149 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWH 851 +EV V+ F+ ++ID+ G +KGKG++G + R G R P HR V A Sbjct: 103 QEVTVDT-FEAGDIIDVTGTSKGKGFQGAIKRHGQARGPMAHGSHFHRAPGSVGM--ASD 159 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYG 1031 +RV G+ G + T N +V ++ TE ++ Sbjct: 160 ASRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENNV---------- 194 Query: 1032 VVKGDYLMIKGCCVGPKKRVVTLRQSLLK 1118 +++KG GPKK V ++ S+ K Sbjct: 195 ------ILVKGNVPGPKKGFVEIQTSIKK 217
>Q8CRG0:RL3_STAES 50S ribosomal protein L3 - Staphylococcus epidermidis (strain ATCC| 12228) Length = 220 Score = 36.6 bits (83), Expect = 0.26 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 800 +EV V+ F+ ++ID+ GV+KGKG++G + R G R P Sbjct: 103 QEVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP 140
>Q5HLZ9:RL3_STAEQ 50S ribosomal protein L3 - Staphylococcus epidermidis (strain ATCC| 35984 / RP62A) Length = 220 Score = 36.6 bits (83), Expect = 0.26 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 800 +EV V+ F+ ++ID+ GV+KGKG++G + R G R P Sbjct: 103 QEVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP 140
>Q21M57:RL3_SACD2 50S ribosomal protein L3 - Saccharophagus degradans (strain 2-40 /| ATCC 43961 / DSM 17024) Length = 214 Score = 36.6 bits (83), Expect = 0.26 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%) Frame = +3 Query: 597 KQKKAHLMEIQVNGG-TIADKVDYGYKFFEKE--VPVEAVFQKDEMIDIIGVTKGKGYEG 767 K + H + +V G T+ + + + FE + VEA F+ + +D+ G +KGKG+ G Sbjct: 63 KPEAGHFAKAEVEAGRTVLELRNESGEQFEVGGLLTVEA-FEAGQKVDVTGASKGKGFAG 121 Query: 768 VVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYTVARAGQNGYHHRTEMNKKVYK 935 V+ R+ R+ TH R IG P RV AG G T N +V + Sbjct: 122 VIKRYNF-RMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAARVTTQNLEVVR 180 Query: 936 I 938 + Sbjct: 181 V 181
>Q2RFP7:RL3_MOOTA 50S ribosomal protein L3 - Moorella thermoacetica (strain ATCC| 39073) Length = 209 Score = 36.6 bits (83), Expect = 0.26 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARV 863 VF E +D+ G++KGKG+ G + R G R P K HR +A G PARV Sbjct: 101 VFSPGEKVDVTGISKGKGFAGGIKRHGFHRGPMEHGSKYHRRPGSLAAKG---PARV 154
>Q5FM90:RL3_LACAC 50S ribosomal protein L3 - Lactobacillus acidophilus| Length = 212 Score = 36.6 bits (83), Expect = 0.26 Identities = 16/42 (38%), Positives = 30/42 (71%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 812 EV V+ F++ +++++ G ++G GY+G + RWG +R P +TH Sbjct: 96 EVTVDT-FKEGDVVNVTGTSRGHGYQGNIKRWGQSRGP-ETH 135
>Q493K8:RL3_BLOPB 50S ribosomal protein L3 - Blochmannia pennsylvanicus (strain BPEN)| Length = 217 Score = 36.2 bits (82), Expect = 0.34 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTV 875 +F+ + +DI G++KGKG+ G + RW L R IG P RV Sbjct: 102 IFKNVKKVDITGISKGKGFAGTIKRWNFHMQDASHGNSLSHRAPGSIGQNQTPGRVFKGK 161 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 AGQ G + T N V + Sbjct: 162 KMAGQLGNYKVTVQNLDVVNV 182
>P49404:RM03_CAEEL Putative mitochondrial 39S ribosomal protein L3 - Caenorhabditis| elegans Length = 403 Score = 35.8 bits (81), Expect = 0.44 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Frame = +3 Query: 708 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 884 F + + G T G++G + RWG+ P R+T + R++ +G+ AR+ Sbjct: 218 FGVGQYVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMP 277 Query: 885 GQNGYHHRTEMNKKVYKIGKSGQ 953 G GY RT ++ +I Q Sbjct: 278 GHMGYEWRTVSGLEIVRINVDKQ 300
>Q5GWT3:RL3_XANOR 50S ribosomal protein L3 - Xanthomonas oryzae pv. oryzae| Length = 216 Score = 35.8 bits (81), Expect = 0.44 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 7/132 (5%) Frame = +3 Query: 564 AHTQIRKMKGL---KQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDI 734 A ++ +GL + + AHL + V G AD +F+ + +D+ Sbjct: 74 AKAKVEAGRGLWEFRVEDAHLGDFAVGGEIKAD-----------------IFEVGQKVDV 116 Query: 735 IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNGYH 902 GVTKGKG++G + R+ R+ TH G+ P RV +G G Sbjct: 117 QGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAV 175 Query: 903 HRTEMNKKVYKI 938 ++ N +V K+ Sbjct: 176 QQSTQNLEVVKV 187
>Q2NZY5:RL3_XANOM 50S ribosomal protein L3 - Xanthomonas oryzae pv. oryzae (strain| MAFF 311018) Length = 216 Score = 35.8 bits (81), Expect = 0.44 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 7/132 (5%) Frame = +3 Query: 564 AHTQIRKMKGL---KQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDI 734 A ++ +GL + + AHL + V G AD +F+ + +D+ Sbjct: 74 AKAKVEAGRGLWEFRVEDAHLGDFAVGGEIKAD-----------------IFEVGQKVDV 116 Query: 735 IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNGYH 902 GVTKGKG++G + R+ R+ TH G+ P RV +G G Sbjct: 117 QGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAV 175 Query: 903 HRTEMNKKVYKI 938 ++ N +V K+ Sbjct: 176 QQSTQNLEVVKV 187
>Q3SLP9:RL3_THIDA 50S ribosomal protein L3 - Thiobacillus denitrificans (strain ATCC| 25259) Length = 214 Score = 35.8 bits (81), Expect = 0.44 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 8/134 (5%) Frame = +3 Query: 561 IAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAV----FQKDEMI 728 +A+ R + K + H + V+ G + + + P AV FQ + + Sbjct: 51 VAYGSRRNSRVNKSEAGHYAKAGVDAGELLREFRVAADVAAQYQPGAAVSVEVFQAGQKV 110 Query: 729 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIG----AWHPARVSYTVARAGQNG 896 D+ GVT+GKG+ G + R + R +H R G A P RV +G G Sbjct: 111 DVTGVTQGKGFAGTIKRHNF-KSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMSGHMG 169 Query: 897 YHHRTEMNKKVYKI 938 T+ N +V ++ Sbjct: 170 AVSCTKQNLEVVRV 183
>Q82DP5:RL3_STRAW 50S ribosomal protein L3 - Streptomyces avermitilis| Length = 214 Score = 35.8 bits (81), Expect = 0.44 Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 5/116 (4%) Frame = +3 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTR-- 779 + HL+EI+ AD +Y +E+ E F+ +D+ G +KGKG+ GV+ R Sbjct: 80 RRHLVEIRT-----ADASEYT---LGQEITAET-FEAGVKVDVTGKSKGKGFAGVMKRHN 130 Query: 780 ---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 G ++ HR + G P RV + AG+ G T N V+ + Sbjct: 131 FKGLGAGHGTQRKHRSPGSIG--GCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
>Q9HWD5:RL3_PSEAE 50S ribosomal protein L3 - Pseudomonas aeruginosa| Length = 211 Score = 35.8 bits (81), Expect = 0.44 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRW 782 +FQ +M+D+ G +KGKG+ G + RW Sbjct: 100 LFQAGQMVDVTGESKGKGFAGTIKRW 125
>P30762:RL3_MYCLE 50S ribosomal protein L3 - Mycobacterium leprae| Length = 217 Score = 35.8 bits (81), Expect = 0.44 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Frame = +3 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTR-- 779 + +L E++++ A + + G +E+ E +F +D+ G +KGKG+ G + R Sbjct: 78 RRYLAELRLDHPDAAAEYEVG-----QELTAE-IFADATYVDVTGTSKGKGFSGTMKRHG 131 Query: 780 ---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 G + + HR R + G PARV AG+ G T N V+K+ Sbjct: 132 FRGQGASHGAQAVHR--RPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLVHKV 185
>Q2JFH6:RL3_FRASC 50S ribosomal protein L3 - Frankia sp. (strain CcI3)| Length = 235 Score = 35.8 bits (81), Expect = 0.44 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL-----PRKTHRGLRKVACIGAWHPARVSY 869 VF ++D+ G +KGKG+ GV+ R G L + HR V G P RV Sbjct: 105 VFSAGTVVDVTGTSKGKGFAGVMKRHGFKGLGAGHGVERKHRSPGSVG--GCATPGRVFK 162 Query: 870 TVARAGQNGYHHRTEMNKKVYKI 938 + AG+ G+ T ++ + Sbjct: 163 GLRMAGRMGHVRTTTSGLTIHAV 185
>Q72CI0:RL3_DESVH 50S ribosomal protein L3 - Desulfovibrio vulgaris (strain| Hildenborough / ATCC 29579 / NCIMB 8303) Length = 209 Score = 35.8 bits (81), Expect = 0.44 Identities = 32/134 (23%), Positives = 55/134 (41%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARA 884 +F + + + G + GKGY+GV+ RW + TH G KV G Sbjct: 103 LFATGDRVKVSGTSIGKGYQGVMRRWNFAG-SKDTH-GCEKVHRSG-----------GSI 149 Query: 885 GQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKG 1064 G N + KK+ +G +E+ T + D+ P + + +++KG Sbjct: 150 GNNTFPGHVFKGKKM-----AGHWGNESVTVLNLEVVDVRP----------EDNVILVKG 194 Query: 1065 CCVGPKKRVVTLRQ 1106 GPK +V +R+ Sbjct: 195 SVPGPKNGLVMVRK 208
>Q9NJ15:PCSK5_BRACL Proprotein convertase subtilisin/kexin type 5 precursor -| Branchiostoma californiensis (California lancelet) (Amphioxus) Length = 1696 Score = 35.8 bits (81), Expect = 0.44 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Frame = -2 Query: 990 QSCQTQCRPRETPVQTCRSY-----RPSCSSLCGGGNHSDQHGQQCKTP*QDARHRYRQP 826 QSC+T P +T +C+ R C + CG G + D+ ++CK + Sbjct: 1240 QSCKTCSGPSDTDCDSCKGDDTILDRGECITSCGPGEYMDRREKKCKACHPTCK-ECSDE 1298 Query: 825 FGDPCGSCGEG 793 + D C +C +G Sbjct: 1299 YDDTCTACNDG 1309
>P31334:RM09_YEAST 54S ribosomal protein L9, mitochondrial precursor - Saccharomyces| cerevisiae (Baker's yeast) Length = 269 Score = 35.4 bits (80), Expect = 0.58 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%) Frame = +3 Query: 708 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW----HPARVSYTV 875 F++ + +D+ V+KGKG+ GV+ R+G L R +H G++ P RV Sbjct: 160 FKEGQYVDVRSVSKGKGFTGVMKRYGFKGL-RASHGTSIMHRHGGSYGQNQDPGRVLPGR 218 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 G G H T N KV K+ Sbjct: 219 KMPGHMGNEHVTIQNVKVLKV 239
>Q8PC49:RL3_XANCP 50S ribosomal protein L3 - Xanthomonas campestris pv. campestris| Length = 216 Score = 35.4 bits (80), Expect = 0.58 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 872 +F+ + +D+ GVTKGKG++G + R+ R+ TH G+ P RV Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 +G G ++ N +V K+ Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187
>Q4URD9:RL3_XANC8 50S ribosomal protein L3 - Xanthomonas campestris pv. campestris| (strain 8004) Length = 216 Score = 35.4 bits (80), Expect = 0.58 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 872 +F+ + +D+ GVTKGKG++G + R+ R+ TH G+ P RV Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 +G G ++ N +V K+ Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187
>Q3BWY3:RL3_XANC5 50S ribosomal protein L3 - Xanthomonas campestris pv. vesicatoria| (strain 85-10) Length = 216 Score = 35.4 bits (80), Expect = 0.58 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 872 +F+ + +D+ GVTKGKG++G + R+ R+ TH G+ P RV Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 +G G ++ N +V K+ Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187
>Q8PNS4:RL3_XANAC 50S ribosomal protein L3 - Xanthomonas axonopodis pv. citri| Length = 216 Score = 35.4 bits (80), Expect = 0.58 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 872 +F+ + +D+ GVTKGKG++G + R+ R+ TH G+ P RV Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 +G G ++ N +V K+ Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187
>Q21RV8:RL3_RHOFD 50S ribosomal protein L3 - Rhodoferax ferrireducens (strain DSM| 15236 / ATCC BAA-621 / T118) Length = 228 Score = 35.4 bits (80), Expect = 0.58 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Frame = +3 Query: 690 VPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIG----AWHPA 857 VPV AVF + +D+ G T GKG+ G + R + + R +H R G A P Sbjct: 103 VPVTAVFAVGQKVDVQGTTIGKGFAGTIKRHHM-KSQRASHGNSRSHNVPGSIGMAQDPG 161 Query: 858 RVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQ 953 RV G G T N V +I ++ Q Sbjct: 162 RVFPGKRMTGHLGDDTVTTQNLDVIRIDEARQ 193
>Q73SB3:RL3_MYCPA 50S ribosomal protein L3 - Mycobacterium paratuberculosis| Length = 217 Score = 35.4 bits (80), Expect = 0.58 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 869 +F +D+ G +KGKG+ G + R G + + HR R + G PARV Sbjct: 105 IFTDGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162 Query: 870 TVARAGQNGYHHRTEMNKKVYKI 938 AG+ G T N V+K+ Sbjct: 163 GTRMAGRMGNDRVTVQNLLVHKV 185
>Q88XY6:RL3_LACPL 50S ribosomal protein L3 - Lactobacillus plantarum| Length = 209 Score = 35.4 bits (80), Expect = 0.58 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVAR 881 +F + +D+ G+TKG GY+G + + G +R P R R+ +GA RV Sbjct: 102 IFAAGDAVDVTGITKGHGYQGNIHKDGQSRGPMAHGSRYHRRPGSMGA-IINRVFKGKKL 160 Query: 882 AGQNGYHHRTEMNKKVYK 935 G+ G H RT N ++ + Sbjct: 161 PGRMGNHQRTMQNLQIVR 178
>Q9SKX4:RK3A_ARATH 50S ribosomal protein L3-1, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 271 Score = 35.4 bits (80), Expect = 0.58 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 12/140 (8%) Frame = +3 Query: 561 IAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKF-----FE--KEVPVEAVFQKD 719 I + ++R K K + HL + GTI + ++ FE +++ + +F++ Sbjct: 105 IGYRRVRDKKLTKPETGHLQK----AGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEG 160 Query: 720 EMIDIIGVTKGKGYEGVVTRW----GVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 887 +++D+ G T GKG++G + R G K+HR L + P RV G Sbjct: 161 DLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIG--AGTTPGRVYKGKKMPG 218 Query: 888 QNGYHHRTEMNK-KVYKIGK 944 + G RT++ K K+ K+ K Sbjct: 219 RMG-GTRTKIRKLKIVKVDK 237
>Q46WE4:RL3_RALEJ 50S ribosomal protein L3 - Ralstonia eutropha (strain JMP134)| (Alcaligenes eutrophus) Length = 216 Score = 35.0 bits (79), Expect = 0.76 Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIG----AWHPARVSYT 872 +F+ + ID+ GVT GKGY G + R+ R TH R G A P RV Sbjct: 103 LFEVGQKIDVQGVTIGKGYAGTIKRYHFAS-GRATHGNSRSHNVPGSIGMAQDPGRVFPG 161 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 G G RT N ++ KI Sbjct: 162 KRMTGHLGDVTRTVQNLEIAKI 183
>Q2YAZ7:RL3_NITMU 50S ribosomal protein L3 - Nitrosospira multiformis (strain ATCC| 25196 / NCIMB 11849) Length = 236 Score = 35.0 bits (79), Expect = 0.76 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIG-AWHPARVSYTV 875 +FQ + +D+ G + GKGY G + R G R R IG A P RV Sbjct: 103 IFQPGQRVDVTGTSIGKGYAGAIKRHGFASNRASHGNSRSHNVPGSIGMAQDPGRVFPGK 162 Query: 876 ARAGQNGYHHRTEMNKKVYKI 938 G G RT N ++ +I Sbjct: 163 RMTGHLGNVRRTIQNLEILRI 183
>Q8RIF5:RL3_FUSNN 50S ribosomal protein L3 - Fusobacterium nucleatum subsp. nucleatum| Length = 211 Score = 35.0 bits (79), Expect = 0.76 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Frame = +3 Query: 726 IDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG--AWHPARVSYTVARAGQN 893 +DI G +KGKG GV+ + G + R R R IG +W P +V AGQ+ Sbjct: 106 VDITGTSKGKGTSGVMKKHGFSGNRASHGVSRNHRLGGSIGMSSW-PGKVLKGKKMAGQH 164 Query: 894 GYHHRTEMNKKVYKI 938 G T N KV K+ Sbjct: 165 GNATVTVQNLKVVKV 179
>Q3ZZM4:RL3_DEHSC 50S ribosomal protein L3 - Dehalococcoides sp. (strain CBDB1)| Length = 205 Score = 35.0 bits (79), Expect = 0.76 Identities = 17/35 (48%), Positives = 22/35 (62%) Frame = +3 Query: 708 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 812 F+ E ID GV++G+G+ GVV RW P KTH Sbjct: 98 FKDGEKIDASGVSRGRGFSGVVKRWHFAGGP-KTH 131
>Q9PJL4:RL3_CHLMU 50S ribosomal protein L3 - Chlamydia muridarum| Length = 221 Score = 35.0 bits (79), Expect = 0.76 Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 2/124 (1%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 878 +F +D+ G++KGKG++GV+ ++G P+ G R IG P R Sbjct: 111 IFDGVSNVDVCGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 879 RAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMI 1058 R G T N +V K+ D K + G P + KG +++ Sbjct: 171 RPSHMGCDRVTVKNLEVVKV--------------DLDRKVMLVKGAIPGF---KGSVVVV 213 Query: 1059 KGCC 1070 K C Sbjct: 214 KRSC 217
>P94267:RL3_BORBU 50S ribosomal protein L3 - Borrelia burgdorferi (Lyme disease| spirochete) Length = 206 Score = 35.0 bits (79), Expect = 0.76 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Frame = +3 Query: 687 EVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 854 E+ V+ VF+ + +D+ G TKGKG++G + R + P K HR L A P Sbjct: 94 EIKVD-VFKSVKYVDVTGTTKGKGFQGAMKRHNFSGGPSSHGSKFHRHLGGTG--QATTP 150 Query: 855 ARVSYTVARAGQNGYHHRTEMNKKVYKI 938 AR AG+ + +T N +V I Sbjct: 151 ARTFKGTKMAGRMAGNQQTIQNLEVVLI 178
>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)| Length = 2752 Score = 35.0 bits (79), Expect = 0.76 Identities = 27/80 (33%), Positives = 37/80 (46%) Frame = +1 Query: 49 PQVRKEQRRCRTASLSTRGTVPSASSPGSAARVTVER*SPSPRMTNRSRATSLPSWATRL 228 P + + + R RT+ +S R S S R + R SP R +RSR + +R Sbjct: 1881 PLISRRRSRSRTSPVSRRR---SRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRS 1937 Query: 229 E*PTLFVRSRSLDPSSTRRK 288 PT RSRS P TRR+ Sbjct: 1938 RTPTTRRRSRSRTPPVTRRR 1957
>P51990:RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 - Xenopus| laevis (African clawed frog) Length = 358 Score = 35.0 bits (79), Expect = 0.76 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = -2 Query: 249 HEQCGSFQPCSPGRQ*GGTASVGHPWGRTSPFHGDASSASWGGSRGNR 106 ++Q S+ P G GG S+G P+G + G+ S AS GG G R Sbjct: 308 NQQSSSYGPMKSGGNFGGNRSMGGPYGGGNYGPGNGSGASGGGGYGGR 355
>Q7M8D4:RL3_WOLSU 50S ribosomal protein L3 - Wolinella succinogenes| Length = 192 Score = 34.7 bits (78), Expect = 0.99 Identities = 32/109 (29%), Positives = 41/109 (37%), Gaps = 3/109 (2%) Frame = +3 Query: 744 TKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIG--AWHPARVSYTVARAGQNGYHHRTE 914 TKG+G+ GV+ RW P HR R+ IG W P RV AGQ G T Sbjct: 100 TKGRGFTGVMKRWNFAGGPAAHGHRFKRRTGSIGNREW-PGRVQPGKKMAGQYGNEKVTV 158 Query: 915 MNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIK 1061 N+ V FD K + G P + G ++K Sbjct: 159 QNEIV---------------SFDAENKILVLKGSIPGFNGAFGRIKVVK 192
>Q3IF25:RL3_PSEHT 50S ribosomal protein L3 - Pseudoalteromonas haloplanktis (strain| TAC 125) Length = 211 Score = 34.7 bits (78), Expect = 0.99 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 4/112 (3%) Frame = +3 Query: 615 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 794 L E ++NGG +V E+ VE +F + +D+ G +KGKG++G V RW + Sbjct: 80 LWEFRLNGGEGDFEVG-------AELTVE-LFNEINKVDVTGTSKGKGFQGGVKRWNFS- 130 Query: 795 LPRKTHRGL---RKVACIGA-WHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 + TH R IG P +V AG G T N ++ ++ Sbjct: 131 MQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELVRV 182
>Q3Z981:RL3_DEHE1 50S ribosomal protein L3 - Dehalococcoides ethenogenes (strain 195)| Length = 205 Score = 34.7 bits (78), Expect = 0.99 Identities = 17/35 (48%), Positives = 22/35 (62%) Frame = +3 Query: 708 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 812 F+ E ID GV++G+G+ GVV RW P KTH Sbjct: 98 FKDGEKIDASGVSRGRGFAGVVKRWHFAGGP-KTH 131
>Q83ES4:RL3_COXBU 50S ribosomal protein L3 - Coxiella burnetii| Length = 217 Score = 34.7 bits (78), Expect = 0.99 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 872 +F++ +++D+ G+T+GKG+ G V R R TH R IG P RV Sbjct: 103 IFKEGQVVDVRGLTRGKGFAGTVKRHNF-RTQDATHGNSLSHRAPGSIGQCQTPGRVWKG 161 Query: 873 VARAGQNGYHHRTEMNKKVYKI 938 AGQ G + T ++++ K+ Sbjct: 162 KKMAGQLGNVYCTVQSQEIIKV 183
>O84533:RL3_CHLTR 50S ribosomal protein L3 - Chlamydia trachomatis| Length = 221 Score = 34.7 bits (78), Expect = 0.99 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 2/124 (1%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH--PARVSYTVA 878 +F +DI G++KGKG++GV+ ++G P+ G + A P R Sbjct: 111 IFDGVSNVDICGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSTGMRSTPGRCFPGSK 170 Query: 879 RAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMI 1058 R G T N +V K+ D K + G P + KG +++ Sbjct: 171 RPSHMGCDRVTVKNLEVVKV--------------DLDRKVMLVKGAIPGF---KGSVVVV 213 Query: 1059 KGCC 1070 K C Sbjct: 214 KRSC 217
>Q3KLG9:RL3_CHLTA 50S ribosomal protein L3 - Chlamydia trachomatis (strain A/HAR-13 /| ATCC VR-571B) Length = 221 Score = 34.7 bits (78), Expect = 0.99 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 2/124 (1%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH--PARVSYTVA 878 +F +DI G++KGKG++GV+ ++G P+ G + A P R Sbjct: 111 IFDGVSNVDICGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSTGMRSTPGRCFPGSK 170 Query: 879 RAGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMI 1058 R G T N +V K+ D K + G P + KG +++ Sbjct: 171 RPSHMGCDRVTVKNLEVVKV--------------DLDRKVMLVKGAIPGF---KGSVVVV 213 Query: 1059 KGCC 1070 K C Sbjct: 214 KRSC 217
>P57591:RL3_BUCAI 50S ribosomal protein L3 - Buchnera aphidicola subsp. Acyrthosiphon| pisum (Acyrthosiphon pisum symbiotic bacterium) Length = 209 Score = 34.7 bits (78), Expect = 0.99 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRW 782 +F + +DI G++KGKG+ G V RW Sbjct: 100 IFNNVKKVDITGISKGKGFSGTVKRW 125
>Q5T754:LCE1F_HUMAN Late cornified envelope protein 1F - Homo sapiens (Human)| Length = 118 Score = 34.7 bits (78), Expect = 0.99 Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 16/86 (18%) Frame = -2 Query: 999 CPSQSCQTQCRPRETPVQTCRSYRP---------SCSSLCGGGNHSDQHGQQCKTP*QDA 847 CP+ C +C P+ PV +C S C S GGG S G C + + Sbjct: 24 CPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGCCSSGGGGCCSSGGGGCCLSHHRRR 83 Query: 846 R-HRYRQPFGDPC------GSCGEGG 790 R HR+R D C SC GG Sbjct: 84 RSHRHRPQSSDCCSQPSAGSSCCGGG 109
>Q5T7P2:LCE1A_HUMAN Late cornified envelope protein 1A - Homo sapiens (Human)| Length = 110 Score = 34.7 bits (78), Expect = 0.99 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 10/82 (12%) Frame = -2 Query: 999 CPSQSCQTQCRPRETPVQTCRSYRPS--CSSLCGGGNHSDQHGQQCKTP*QDARHRYR-- 832 CP+ C +C P+ PV +C S C S GGG S G + HR+R Sbjct: 24 CPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCSSGGGGCCLSHHRRHRSHRHRLQ 83 Query: 831 ------QPFGDPCGSCGEGG*H 784 QP G G+ G H Sbjct: 84 SSGCCSQPSGGSSCCGGDSGQH 105
>Q49ZG8:RL3_STAS1 50S ribosomal protein L3 - Staphylococcus saprophyticus subsp.| saprophyticus (strain ATCC 15305 / DSM 20229) Length = 219 Score = 34.3 bits (77), Expect = 1.3 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 800 +EV V F+ ++ID+ GV+KGKG++G + R R P Sbjct: 103 QEVSVNT-FEAGDVIDVTGVSKGKGFQGAIKRHNQARGP 140
>Q4ZMP4:RL3_PSEU2 50S ribosomal protein L3 - Pseudomonas syringae pv. syringae| (strain B728a) Length = 211 Score = 34.3 bits (77), Expect = 1.3 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRW 782 +F +++D+ G +KGKG++G + RW Sbjct: 100 IFAAGQLVDVTGQSKGKGFQGTIKRW 125
>Q889X1:RL3_PSESM 50S ribosomal protein L3 - Pseudomonas syringae pv. tomato| Length = 211 Score = 34.3 bits (77), Expect = 1.3 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRW 782 +F +++D+ G +KGKG++G + RW Sbjct: 100 IFAAGQLVDVTGQSKGKGFQGTIKRW 125
>Q3K5Y8:RL3_PSEPF 50S ribosomal protein L3 - Pseudomonas fluorescens (strain PfO-1)| Length = 211 Score = 34.3 bits (77), Expect = 1.3 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRW 782 +F +++D+ G +KGKG++G + RW Sbjct: 100 IFAAGQLVDVTGQSKGKGFQGTIKRW 125
>Q48D36:RL3_PSE14 50S ribosomal protein L3 - Pseudomonas syringae pv. phaseolicola| (strain 1448A / Race 6) Length = 211 Score = 34.3 bits (77), Expect = 1.3 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRW 782 +F +++D+ G +KGKG++G + RW Sbjct: 100 IFAAGQLVDVTGQSKGKGFQGTIKRW 125
>Q9Z7Q7:RL3_CHLPN 50S ribosomal protein L3 - Chlamydia pneumoniae (Chlamydophila| pneumoniae) Length = 219 Score = 34.3 bits (77), Expect = 1.3 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 878 VF+ +D+ G++KGKG++GV+ ++G P G R IG P R Sbjct: 111 VFEDVSSVDVRGISKGKGFQGVMKKFGFRGGPGSHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 879 RAGQNGYHHRTEMNKKVYKI 938 R G + T N +V K+ Sbjct: 171 RPSHMGAENVTVKNLEVIKV 190
>Q7VQE8:RL3_BLOFL 50S ribosomal protein L3 - Blochmannia floridanus| Length = 219 Score = 34.3 bits (77), Expect = 1.3 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Frame = +3 Query: 726 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNG 896 +D+ G++KGKG+ G V RW L R IG P +V AG G Sbjct: 108 VDVTGISKGKGFAGAVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLG 167 Query: 897 YHHRTEMNKKVYKI 938 Y T N V I Sbjct: 168 YEKATIQNLAVINI 181
>P11252:RL3_YERPS 50S ribosomal protein L3 - Yersinia pseudotuberculosis| Length = 209 Score = 33.9 bits (76), Expect = 1.7 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRW 782 +E+ VE +F + +D+ G +KGKG+ G V RW Sbjct: 94 QEISVE-IFADVKKVDVTGTSKGKGFAGTVKRW 125
>Q8ZJA9:RL3_YERPE 50S ribosomal protein L3 - Yersinia pestis| Length = 209 Score = 33.9 bits (76), Expect = 1.7 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRW 782 +E+ VE +F + +D+ G +KGKG+ G V RW Sbjct: 94 QEISVE-IFADVKKVDVTGTSKGKGFAGTVKRW 125
>Q9PE76:RL3_XYLFA 50S ribosomal protein L3 - Xylella fastidiosa| Length = 215 Score = 33.9 bits (76), Expect = 1.7 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 9/123 (7%) Frame = +3 Query: 597 KQKKAHLMEIQVNGGT-----IADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGY 761 K + H + +V G +K G EV + ++F + +DI G+TKGKG+ Sbjct: 66 KPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGL-SIFAVGQKVDIQGITKGKGF 124 Query: 762 EGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNGYHHRTEMNKKV 929 +G + R R+ TH G+ P RV +G G ++ N +V Sbjct: 125 QGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEV 183 Query: 930 YKI 938 KI Sbjct: 184 VKI 186
>Q9L0E0:RL3_STRCO 50S ribosomal protein L3 - Streptomyces coelicolor| Length = 214 Score = 33.9 bits (76), Expect = 1.7 Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 3/114 (2%) Frame = +3 Query: 606 KAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWG 785 + HL+EI+ A + G +E+ EA F+ +D+ +KGKG+ GV+ R Sbjct: 80 RRHLVEIRT---AAASEYTLG-----QEITAEA-FESGVKVDVTAKSKGKGFAGVMKRHN 130 Query: 786 VT--RLPRKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 + HR R IG P RV + AG+ G T N V+ + Sbjct: 131 FKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAV 184
>Q8XV12:RL3_RALSO 50S ribosomal protein L3 - Ralstonia solanacearum (Pseudomonas| solanacearum) Length = 220 Score = 33.9 bits (76), Expect = 1.7 Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 8/155 (5%) Frame = +3 Query: 498 GKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIA-----DKVD 662 G + Q++ ++ Y T V+V T+ R + K HL + V G I D Sbjct: 32 GNRVTQIKTDETDGY-TAVQVTFGTR-RASRVTKPLAGHLAKAGVEAGEIIVEFRIDATK 89 Query: 663 YGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVAC 836 + V+ +F D+ ID+ G T GKGY G + R+ + R R Sbjct: 90 AAELKLGDTIDVD-LFSVDQKIDVQGTTIGKGYAGTIKRYHFSSGRASHGNSRSHNVPGS 148 Query: 837 IG-AWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 938 IG A P RV G G RT N + +I Sbjct: 149 IGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRI 183
>Q65QV5:RL3_MANSM 50S ribosomal protein L3 - Mannheimia succiniciproducens (strain| MBEL55E) Length = 208 Score = 33.9 bits (76), Expect = 1.7 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 851 +E+ V+ +F + +D+ G +KGKG++G V RW R TH +G+ Sbjct: 93 QEINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 150 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKI 938 P RV AG G T + +V ++ Sbjct: 151 PGRVFKGKKMAGHLGAERVTVQSLEVVRV 179
>P44344:RL3_HAEIN 50S ribosomal protein L3 - Haemophilus influenzae| Length = 208 Score = 33.9 bits (76), Expect = 1.7 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 851 +E+ V+ +F + +D+ G +KGKG++G V RW R TH +G+ Sbjct: 93 QEINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 150 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKI 938 P RV AG G T + +V ++ Sbjct: 151 PGRVFKGKKMAGHLGAERVTVQSLEVVRV 179
>Q4QMC2:RL3_HAEI8 50S ribosomal protein L3 - Haemophilus influenzae (strain 86-028NP)| Length = 208 Score = 33.9 bits (76), Expect = 1.7 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 851 +E+ V+ +F + +D+ G +KGKG++G V RW R TH +G+ Sbjct: 93 QEINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 150 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKI 938 P RV AG G T + +V ++ Sbjct: 151 PGRVFKGKKMAGHLGAERVTVQSLEVVRV 179
>Q7NQF2:RL3_CHRVO 50S ribosomal protein L3 - Chromobacterium violaceum| Length = 214 Score = 33.9 bits (76), Expect = 1.7 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYTV 875 +F +++D+ G +KGKG+ GV+ R + R R IG A P RV Sbjct: 103 IFTVGQLVDVTGTSKGKGFSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGK 162 Query: 876 ARAGQNG 896 AGQ G Sbjct: 163 RMAGQYG 169
>Q9FA04:RL3_BRAPL 50S ribosomal protein L3 - Brachyspira pilosicoli| Length = 218 Score = 33.9 bits (76), Expect = 1.7 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA-CIGA-WHPARVSYTVA 878 +FQ + ID+ ++KG+G+ GV+ R P R+ A IG +PARV Sbjct: 100 IFQAGDFIDVSSLSKGRGFAGVMKRHNYDGGPMSHGSNFRRRAGSIGCNSYPARVWKGKG 159 Query: 879 RAGQNGYHHRTEMNKKVYKI 938 G G T N KV +I Sbjct: 160 MPGHMGNTLTTIQNLKVVEI 179
>P94799:RL3_ACTAC 50S ribosomal protein L3 - Actinobacillus actinomycetemcomitans| (Haemophilus actinomycetemcomitans) Length = 121 Score = 33.9 bits (76), Expect = 1.7 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 851 +E+ V+ +F + +D+ G +KGKG++G V RW R TH +G+ Sbjct: 6 QEINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 63 Query: 852 PARVSYTVARAGQNGYHHRTEMNKKVYKI 938 P RV AG G T + +V ++ Sbjct: 64 PGRVFKGKKMAGHLGNERVTVQSLEVVRV 92
>Q87E82:RL3_XYLFT 50S ribosomal protein L3 - Xylella fastidiosa (strain Temecula1 /| ATCC 700964) Length = 215 Score = 33.5 bits (75), Expect = 2.2 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 9/123 (7%) Frame = +3 Query: 597 KQKKAHLMEIQVNGGT-----IADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGY 761 K + H + +V G +K G EV + ++F + +DI G+TKGKG+ Sbjct: 66 KPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGL-SIFAVGQKVDIQGITKGKGF 124 Query: 762 EGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNGYHHRTEMNKKV 929 +G + R R+ TH G+ P RV +G G ++ N +V Sbjct: 125 QGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEV 183 Query: 930 YKI 938 KI Sbjct: 184 IKI 186
>Q6ME63:RL3_PARUW 50S ribosomal protein L3 - Protochlamydia amoebophila (strain| UWE25) Length = 235 Score = 33.5 bits (75), Expect = 2.2 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Frame = +3 Query: 684 KEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH--PA 857 +E+ V+ F E +D ++KGKGY+GV+ R P G + A P Sbjct: 116 QEISVDT-FNGIEFVDATAISKGKGYQGVMKRHNFAGGPASHGSGHHRHAGSTGMRSTPG 174 Query: 858 RVSYTVARAGQNGYHHRTEMNKKVYKI 938 R +AGQ G T N ++ K+ Sbjct: 175 RGLPGGKKAGQMGNERVTVQNLRIVKV 201
>Q5WZL2:RL3_LEGPL 50S ribosomal protein L3 - Legionella pneumophila (strain Lens)| Length = 216 Score = 33.5 bits (75), Expect = 2.2 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = +3 Query: 579 RKMKGLKQKKAHLMEIQVNGGT--IADKVDYGYKFFEKEV-PVEAVFQKDEMIDIIGVTK 749 + K K H + Q++ G + ++D F +V V VF + +D+ G+TK Sbjct: 57 KSSKVSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTK 116 Query: 750 GKGYEGVVTR 779 GKG+ G V R Sbjct: 117 GKGFAGTVKR 126
>Q5ZYP3:RL3_LEGPH 50S ribosomal protein L3 - Legionella pneumophila subsp.| pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) Length = 216 Score = 33.5 bits (75), Expect = 2.2 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = +3 Query: 579 RKMKGLKQKKAHLMEIQVNGGT--IADKVDYGYKFFEKEV-PVEAVFQKDEMIDIIGVTK 749 + K K H + Q++ G + ++D F +V V VF + +D+ G+TK Sbjct: 57 KSSKVSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTK 116 Query: 750 GKGYEGVVTR 779 GKG+ G V R Sbjct: 117 GKGFAGTVKR 126
>Q5X859:RL3_LEGPA 50S ribosomal protein L3 - Legionella pneumophila (strain Paris)| Length = 216 Score = 33.5 bits (75), Expect = 2.2 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = +3 Query: 579 RKMKGLKQKKAHLMEIQVNGGT--IADKVDYGYKFFEKEV-PVEAVFQKDEMIDIIGVTK 749 + K K H + Q++ G + ++D F +V V VF + +D+ G+TK Sbjct: 57 KSSKVSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTK 116 Query: 750 GKGYEGVVTR 779 GKG+ G V R Sbjct: 117 GKGFAGTVKR 126
>Q2NIV4:RL3_AYWBP 50S ribosomal protein L3 - Aster yellows witches'-broom phytoplasma| (strain AYWB) Length = 221 Score = 33.5 bits (75), Expect = 2.2 Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 1/141 (0%) Frame = +3 Query: 705 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVAR- 881 +FQ +++D+ G +KGKG+ G + R +R P G R G+ P + + Sbjct: 106 LFQVGDLVDVTGTSKGKGFAGSIKRHNQSRGPES--HGSRYHRRPGSMGPIKGKLKGKKL 163 Query: 882 AGQNGYHHRTEMNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIK 1061 G GY T N + I TEK++ +IK Sbjct: 164 PGHMGYETVTIQNLAILSID---------------TEKNL----------------FLIK 192 Query: 1062 GCCVGPKKRVVTLRQSLLKQT 1124 G GP K V ++ ++ K T Sbjct: 193 GNVPGPNKGFVMIKSAVKKLT 213
>P49569:RK3_ODOSI Chloroplast 50S ribosomal protein L3 - Odontella sinensis (Marine| centric diatom) Length = 207 Score = 33.5 bits (75), Expect = 2.2 Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 4/165 (2%) Frame = +3 Query: 477 LKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADK 656 +K D + G IQ+ + + + H Q ++ LK +L E +VN ++ Sbjct: 38 VKTDLNDGYNAIQIGYGTVSNKSLTQPELGHLQKSNIQPLK----YLKEFRVNN---PEE 90 Query: 657 VDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLR 824 G + V VE++ + ID+ G + GKG+ G+ R TR P K HR Sbjct: 91 FKVG-----QVVNVESL-STGQFIDVTGKSSGKGFSGLQKRHNFTRGPMTHGSKNHRAPG 144 Query: 825 KVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQES 959 + P RV AGQ G ++ KK+ I +G E+ Sbjct: 145 SIGM--GTTPGRVLPGKKMAGQLG--NKVTKTKKLKIIQVNGNEN 185 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 238,680,660 Number of extensions: 5464302 Number of successful extensions: 18054 Number of sequences better than 10.0: 295 Number of HSP's gapped: 17834 Number of HSP's successfully gapped: 309 Length of query: 468 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 351 Effective length of database: 68,593,924 Effective search space: 24076467324 Effective search space used: 24076467324 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
