ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf78d20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK068461:Os02g0741900 278 5e-75
2AK110662: 53 5e-07
3Os06g0186300:Os06g0186300 30 3.3
4AK102332:Os07g0647800 30 3.3
5Os11g0491600:Os11g0491600 28 9.6

>AK068461:Os02g0741900 |
          Length = 181
 Score =  278 bits (711), Expect = 5e-75
 Identities = 143/168 (85%), Positives = 147/168 (87%)
 Frame = +3

Query: 144 ISAKTTLGEEFEGQIVSFDRPSNLLVIQXXXXXXXXXXXXXXXXLKANYIQEFSVVGKYD 323
           IS KTTLGEEFEGQIVSFDRP+NLLVIQ                LKANYI+EFSVVGK D
Sbjct: 14  ISVKTTLGEEFEGQIVSFDRPTNLLVIQEGVGRAERGERRNVRVLKANYIREFSVVGKAD 73

Query: 324 DPLDPAGCVLDLAAIHAREEAALRQAEIEAERIGVGVTPEAQRLFDALSKTLPVHWDKTD 503
           DPLDPAGCVLDLAAIHAREEAALRQAEIEAERIGVGVTPEAQ +FDALSKTLPV WDKTD
Sbjct: 74  DPLDPAGCVLDLAAIHAREEAALRQAEIEAERIGVGVTPEAQSIFDALSKTLPVQWDKTD 133

Query: 504 IVVMKEVRVCSPYLPENVSGGTSAANERVKKVLDFERKRQHVRVPGQF 647
           IVVMKEVRVC+PYLPENVSGGTSAANERVKKVLDFERKR HVRVPGQF
Sbjct: 134 IVVMKEVRVCNPYLPENVSGGTSAANERVKKVLDFERKRLHVRVPGQF 181



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>AK110662: |
          Length = 262

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 26/118 (22%)
 Frame = +3

Query: 351 LDLAAIHAREEAALRQAEIEAERIGVGVTPEAQRLFDALSKTLPVHWDKTDIVVMKEVRV 530
           + L A   RE  A++Q+  +  R G  V+   Q++FDALSKTLP  W  + IVVM+EV +
Sbjct: 141 VSLKAAQLREADAVKQSLTKVARTGKDVSQLGQQVFDALSKTLPCRWHNSHIVVMEEVVI 200

Query: 531 CSP---YLPENVSGGT---------------------SAAN--ERVKKVLDFERKRQH 626
             P       NV G T                     S AN  +RV KVL  ER++ +
Sbjct: 201 SGPGYDAASTNVPGFTQDQLQSYIDGTNTSPAPDGAQSKANSWQRVTKVLQGERRKMN 258



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>Os06g0186300:Os06g0186300 |
          Length = 889

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +3

Query: 9   CRTLKPHADTAPLRPHAPHSGHLLPP 86
           C T   HA   PL PH    GHL PP
Sbjct: 738 CSTATFHALVLPLMPHGSLEGHLYPP 763



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>AK102332:Os07g0647800 |
          Length = 287

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +3

Query: 327 PLDPAGCVLDLAAIHAREEAALRQAEIEAERIGVGVTPEAQRLFDALSKTLPV 485
           P    GC L  AA++    ++ R AE+       G T +   + D  SK LP+
Sbjct: 4   PWGGVGCCLSAAALYLLGRSSGRDAEVLRSVARAGSTKDLAAILDTASKVLPL 56



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>Os11g0491600:Os11g0491600 |
          Length = 1530

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/56 (32%), Positives = 32/56 (57%)
 Frame = -1

Query: 526  RTSFITTMSVLSQ*TGSVFDNASNNL*ASGVTPTPILSASISACLRAASSLAWMAA 359
            R SF  T +++   T S+F++AS++      +PTP+L+    AC  +AS+    +A
Sbjct: 1066 RKSFEETTNIIKA-TTSIFNSASSS--TPPTSPTPVLAKCSWACSNSASAYTTTSA 1118


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 26,297,797
Number of extensions: 507057
Number of successful extensions: 1460
Number of sequences better than 10.0: 5
Number of HSP's gapped: 1457
Number of HSP's successfully gapped: 5
Length of query: 393
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 290
Effective length of database: 11,275,632
Effective search space: 3269933280
Effective search space used: 3269933280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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