| Clone Name | FLbaf78d20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK068461:Os02g0741900 | 278 | 5e-75 | 2 | AK110662: | 53 | 5e-07 | 3 | Os06g0186300:Os06g0186300 | 30 | 3.3 | 4 | AK102332:Os07g0647800 | 30 | 3.3 | 5 | Os11g0491600:Os11g0491600 | 28 | 9.6 |
|---|
>AK068461:Os02g0741900 | Length = 181 Score = 278 bits (711), Expect = 5e-75 Identities = 143/168 (85%), Positives = 147/168 (87%) Frame = +3 Query: 144 ISAKTTLGEEFEGQIVSFDRPSNLLVIQXXXXXXXXXXXXXXXXLKANYIQEFSVVGKYD 323 IS KTTLGEEFEGQIVSFDRP+NLLVIQ LKANYI+EFSVVGK D Sbjct: 14 ISVKTTLGEEFEGQIVSFDRPTNLLVIQEGVGRAERGERRNVRVLKANYIREFSVVGKAD 73 Query: 324 DPLDPAGCVLDLAAIHAREEAALRQAEIEAERIGVGVTPEAQRLFDALSKTLPVHWDKTD 503 DPLDPAGCVLDLAAIHAREEAALRQAEIEAERIGVGVTPEAQ +FDALSKTLPV WDKTD Sbjct: 74 DPLDPAGCVLDLAAIHAREEAALRQAEIEAERIGVGVTPEAQSIFDALSKTLPVQWDKTD 133 Query: 504 IVVMKEVRVCSPYLPENVSGGTSAANERVKKVLDFERKRQHVRVPGQF 647 IVVMKEVRVC+PYLPENVSGGTSAANERVKKVLDFERKR HVRVPGQF Sbjct: 134 IVVMKEVRVCNPYLPENVSGGTSAANERVKKVLDFERKRLHVRVPGQF 181
>AK110662: | Length = 262 Score = 52.8 bits (125), Expect = 5e-07 Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 26/118 (22%) Frame = +3 Query: 351 LDLAAIHAREEAALRQAEIEAERIGVGVTPEAQRLFDALSKTLPVHWDKTDIVVMKEVRV 530 + L A RE A++Q+ + R G V+ Q++FDALSKTLP W + IVVM+EV + Sbjct: 141 VSLKAAQLREADAVKQSLTKVARTGKDVSQLGQQVFDALSKTLPCRWHNSHIVVMEEVVI 200 Query: 531 CSP---YLPENVSGGT---------------------SAAN--ERVKKVLDFERKRQH 626 P NV G T S AN +RV KVL ER++ + Sbjct: 201 SGPGYDAASTNVPGFTQDQLQSYIDGTNTSPAPDGAQSKANSWQRVTKVLQGERRKMN 258
>Os06g0186300:Os06g0186300 | Length = 889 Score = 30.0 bits (66), Expect = 3.3 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +3 Query: 9 CRTLKPHADTAPLRPHAPHSGHLLPP 86 C T HA PL PH GHL PP Sbjct: 738 CSTATFHALVLPLMPHGSLEGHLYPP 763
>AK102332:Os07g0647800 | Length = 287 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +3 Query: 327 PLDPAGCVLDLAAIHAREEAALRQAEIEAERIGVGVTPEAQRLFDALSKTLPV 485 P GC L AA++ ++ R AE+ G T + + D SK LP+ Sbjct: 4 PWGGVGCCLSAAALYLLGRSSGRDAEVLRSVARAGSTKDLAAILDTASKVLPL 56
>Os11g0491600:Os11g0491600 | Length = 1530 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = -1 Query: 526 RTSFITTMSVLSQ*TGSVFDNASNNL*ASGVTPTPILSASISACLRAASSLAWMAA 359 R SF T +++ T S+F++AS++ +PTP+L+ AC +AS+ +A Sbjct: 1066 RKSFEETTNIIKA-TTSIFNSASSS--TPPTSPTPVLAKCSWACSNSASAYTTTSA 1118 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,297,797 Number of extensions: 507057 Number of successful extensions: 1460 Number of sequences better than 10.0: 5 Number of HSP's gapped: 1457 Number of HSP's successfully gapped: 5 Length of query: 393 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 290 Effective length of database: 11,275,632 Effective search space: 3269933280 Effective search space used: 3269933280 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)