>LOC_Os02g50830:12002.t04667:unspliced-genomic expressed protein|
Length = 4414
Score = 97.3 bits (206), Expect(5) = 1e-69
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +3 / +3
Query: 477 LPVHWDKTDIVVMKEVRVCSPYLPENVSGGTSAANERVKKVL 602
LPV WDKTDIVVMKEVRVC+PYLPENVSGGTSAANERVKKV+
Sbjct: 3021 LPVQWDKTDIVVMKEVRVCNPYLPENVSGGTSAANERVKKVV 3146
Score = 90.9 bits (192), Expect(5) = 1e-69
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +3 / +3
Query: 276 LKANYIQEFSVVGKYDDPLDPAGCVLDLAAIHAREEAALR 395
LKANYI+EFSVVGK DDPLDPAGCVLDLAAIHAREEAALR
Sbjct: 429 LKANYIREFSVVGKADDPLDPAGCVLDLAAIHAREEAALR 548
Score = 61.1 bits (127), Expect(5) = 1e-69
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3 / +2
Query: 393 RQAEIEAERIGVGVTPEAQRLFDALSKT 476
RQAEIEAERIGVGVTPEAQ +FDALSKT
Sbjct: 2057 RQAEIEAERIGVGVTPEAQSIFDALSKT 2140
Score = 59.7 bits (124), Expect(5) = 1e-69
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +3 / +3
Query: 144 ISAKTTLGEEFEGQIVSFDRPSNLLVI 224
IS KTTLGEEFEGQIVSFDRP+NLLVI
Sbjct: 165 ISVKTTLGEEFEGQIVSFDRPTNLLVI 245
Score = 47.3 bits (97), Expect(5) = 1e-69
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / +2
Query: 600 LDFERKRQHVRVPGQF*LIRL 662
LDFERKR HVRVPGQF*LIRL
Sbjct: 3479 LDFERKRLHVRVPGQF*LIRL 3541
Score = 92.3 bits (195), Expect(5) = 2e-68
Identities = 45/56 (80%), Positives = 45/56 (80%)
Frame = -1 / -1
Query: 394 LRAASSLAWMAARSSTQPAXXXXXSYLPTTENSWM*LALSTLTFRRSPLSALPTPS 227
LRAASS AWMAARSSTQPA S LPTTENS M* ALST TF RSPLSALPTPS
Sbjct: 547 LRAASSRAWMAARSSTQPAGSSGSSALPTTENSRM*FALSTRTFLRSPLSALPTPS 380
Score = 86.8 bits (183), Expect(5) = 2e-68
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = -1 / -1
Query: 601 STFLTRSLAADVPPLTFSGR*GLHTRTSFITTMSVLSQ*TGSV 473
+TFLTRS AADVPPLTFSGR GLHTRTSFITTMSVLS *TGS+
Sbjct: 3145 TTFLTRSFAADVPPLTFSGRYGLHTRTSFITTMSVLSH*TGSL 3017
Score = 62.5 bits (130), Expect(5) = 2e-68
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1 / -1
Query: 223 MTRRLLGRSKETIWPSNSSPRVVFAEI 143
MTRRL+GRSKETIWPSNSSPRVVF EI
Sbjct: 244 MTRRLVGRSKETIWPSNSSPRVVFTEI 164
Score = 59.3 bits (123), Expect(5) = 2e-68
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = -1 / -2
Query: 475 VFDNASNNL*ASGVTPTPILSASISACLRAASSL 374
V DNASN L*ASGVTPTPILSASISACL + ++
Sbjct: 2139 VLDNASNML*ASGVTPTPILSASISACLHMSQNM 2038
Score = 51.5 bits (106), Expect(5) = 2e-68
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -1 / -2
Query: 664 SSRIS*NWPGTRTCCLFLSKSS 599
SSRIS*NWPGTRTC LFLSKSS
Sbjct: 3543 SSRIS*NWPGTRTCSLFLSKSS 3478
Score = 85.8 bits (181), Expect(5) = 3e-57
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -3 / -3
Query: 599 HFLNPFISS*CSAADIFRQVGTAYTNLLHYNNVGLVPMNWK 477
HFLNPFI S CS+ DIFRQV AYTNLLHYNNV LVP+NWK
Sbjct: 3143 HFLNPFICSRCSSTDIFRQVWIAYTNLLHYNNVSLVPLNWK 3021
Score = 71.6 bits (150), Expect(5) = 3e-57
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = -3 / -3
Query: 395 PEGGLLPGVDGGEVEHTASRVERVVVLADDGELLDVVGLE 276
PE GLLPGVDGGEVEH A RVERVV LA +GEL DVV LE
Sbjct: 548 PESGLLPGVDGGEVEHAAGRVERVVGLAYNGELPDVVRLE 429
Score = 61.6 bits (128), Expect(5) = 3e-57
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = -3 / -3
Query: 224 DDEEVARAVEGDDLALELLPEGGLRGDHHADR 129
+DEEV RAVEGDDLA ELL EGGL GD H DR
Sbjct: 245 NDEEVGRAVEGDDLAFELLAEGGLHGDQHPDR 150
Score = 57.0 bits (118), Expect(5) = 3e-57
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3 / -1
Query: 482 WKRL*QCIK*SLSFWGDTNTNSLSFNLSL 396
+ RL QCIK +LSFWGDTNTNSL FNLSL
Sbjct: 2146 YSRLGQCIKYALSFWGDTNTNSLGFNLSL 2060
Score = 38.6 bits (78), Expect(5) = 3e-57
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -2 / -3
Query: 657 E*VRIGQVHAHVVFSSQSPA 598
E*VRIGQVHAHV FS QS A
Sbjct: 3536 E*VRIGQVHAHVAFSFQSQA 3477
Score = 84.0 bits (177), Expect(4) = 1e-36
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +2 / +2
Query: 476 ASSSLGQDRHCCNEGGSCMQSLPA*KCQRRNISC**TG*ES 598
ASSS+GQD HCCNEGGSCMQS+PA*KCQ RNI C *TG*ES
Sbjct: 3020 ASSSVGQD*HCCNEGGSCMQSIPA*KCQWRNICCK*TG*ES 3142
Score = 61.1 bits (127), Expect(4) = 1e-36
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +2 / +1
Query: 398 S*D*S*ENWCWCHPRSSKII*CIVKDASS 484
S*D*S ENWCWCHPRSSK I*CIV+D S+
Sbjct: 2062 S*D*SRENWCWCHPRSSKHI*CIVQDVSN 2148
Score = 44.6 bits (91), Expect(4) = 1e-36
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2 / +1
Query: 596 SAGL*EEKTTCACTWPILTYS 658
+A L*+EK TCACTWPILTYS
Sbjct: 3475 AA*L*KEKATCACTWPILTYS 3537
Score = 34.1 bits (68), Expect(4) = 1e-36
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 152 EDHPRGGVRGPDRLL 196
EDHPR GVR PDRLL
Sbjct: 173 EDHPRRGVRRPDRLL 217
Score = 71.6 bits (150), Expect(3) = 8e-20
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1 / +1
Query: 478 FQFIGTRPTLL**RRFVYAVPTCLKMSAAEHQLLMNGLRK 597
FQF GTR TLL**RRFVYA+ TCLKMS EH L MNGLRK
Sbjct: 3022 FQFSGTRLTLL**RRFVYAIHTCLKMSVEEHLLQMNGLRK 3141
Score = 38.6 bits (78), Expect(3) = 8e-20
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / +3
Query: 604 TLRGKDNMCVYLANSNLF 657
TL+GK MCVYLANSNLF
Sbjct: 3483 TLKGKGYMCVYLANSNLF 3536
Score = 35.0 bits (70), Expect(3) = 8e-20
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 433 SPQKLKDYLMHCQRR 477
SPQKLK YLMHC RR
Sbjct: 2097 SPQKLKAYLMHCPRR 2141
Score = 84.0 bits (177), Expect(2) = 2e-19
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = -2 / -2
Query: 597 LS*PVH*QLMFRR*HFQAGRDCIHEPPSLQQCRSCPNELEA 475
LS*PVH Q MF *HFQAG DCIHEPPSLQQC+SCP ELEA
Sbjct: 3141 LS*PVHLQQMFLH*HFQAGMDCIHEPPSLQQCQSCPTELEA 3019
Score = 37.7 bits (76), Expect(2) = 2e-19
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 656 NKLELARYTHMLSFPLKVQ 600
NKLELARYTHM FP KV+
Sbjct: 3535 NKLELARYTHM*PFPFKVK 3479
>LOC_Os06g51370:12006.t04820:unspliced-genomic serine carboxypeptidase F13S12.6 precursor, putative, expressed|
Length = 2152
Score = 27.2 bits (53), Expect(2) = 9.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1 / +3
Query: 415 SASISACLRAASSLAWMAARSSTQPAXXXXXSYLPT 308
SAS +ACL ++ AW A S+T A PT
Sbjct: 1497 SASAAACLTTRTTRAWTTA*STT*TAATSRRRSTPT 1604
Score = 26.3 bits (51), Expect(2) = 9.2
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 846 CCNYSPPPHMAS 811
CC++SPPP AS
Sbjct: 611 CCSWSPPPASAS 646
>LOC_Os01g74550:12001.t06733:unspliced-genomic transposon protein, putative, unclassified|
Length = 3561
Score = 31.8 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1 / +1
Query: 445 ASGVTPTPILSASISACLRAASSLAWMAARSSTQPAXXXXXSYLPTTENSW 293
++ P PI SA+ + A+ S W A ++S+ + PTT +SW
Sbjct: 718 STSAPPPPIPSATPTTPTTASGSPTWRAGQTSSSTPRPAPSASPPTTPSSW 870
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 380,732,182
Number of extensions: 5442346
Number of successful extensions: 24600
Number of sequences better than 10.0: 21
Length of query: 393
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 343
Effective length of database: 52,799,986
Effective search space: 18110395198
Effective search space used: 18110395198
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)