ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf80m16 |
|---|---|
| Clone Library Name | barley_pub |
>Q07469:BSPA_POPDE Bark storage protein A precursor - Populus deltoides (Eastern poplar)| (Eastern cottonwood) Length = 312 Score = 207 bits (526), Expect = 1e-52 Identities = 116/281 (41%), Positives = 170/281 (60%), Gaps = 3/281 (1%) Frame = +1 Query: 184 IGLVMSYVAEDTALQASGYFRPWRVQPFVDLYGRRFHIGSIRGVNVIYALTGQRRLNAAV 363 +GLV + + ALQ SG + P VD+ GRRFH G++ G +++Y TG +N A Sbjct: 29 LGLVFTSDNNERALQDSGLYSPDSEDSSVDIAGRRFHSGTLNGSSIVYVKTGSPSVNMAT 88 Query: 364 TVQTLLDVFTVSGIVHYGTAGS-SNDSMSFGDVSVPKLVAYTGAWTWKKYKSLKEASTEL 540 T+Q LL F + G++++G AGS +M GDVSVP+ VA+TG W WKK+ S K +L Sbjct: 89 TLQILLVRFNIHGVIYFGNAGSLDKKTMVPGDVSVPQAVAFTGVWNWKKFGSEK---GKL 145 Query: 541 SFGQFNVPDEGENLLGSLKYRNEELYSVGKPMEEVFWLPVDSAWFKIA-EGLK-VTLERC 714 FG FN P+ GENLLG+++Y +++S + +EVFWLP+ +W+ A E LK + L +C Sbjct: 146 VFGDFNYPENGENLLGTVEYEKIKMFSPSEAPKEVFWLPITKSWYNAATEALKDMKLRKC 205 Query: 715 NDTFCLPKTPQVVHGLKGASADMFLDNAEYRKFLFREFAVSTIDEESAAVVMTTTSPGVP 894 CLP P+VV G K +++D ++ N Y FL F T D SA+V +T+ S Sbjct: 206 YSDECLPGKPKVVFGSKSSTSDFYVRNKAYGDFLNDNFDAKTADTASASVALTSLSNEKL 265 Query: 895 VIVFRGVSDLAGGEPTWSSTSLMNLASINALKVAVEFIATI 1017 +VF+GVS++AG T S++ + LAS NA A +FI +I Sbjct: 266 FVVFQGVSNVAG--ETSSNSRVSYLASYNAFLAATKFINSI 304
>Q09117:BSPB_POPDE Bark storage protein B precursor - Populus deltoides (Eastern poplar)| (Eastern cottonwood) Length = 312 Score = 205 bits (521), Expect = 4e-52 Identities = 115/281 (40%), Positives = 171/281 (60%), Gaps = 3/281 (1%) Frame = +1 Query: 184 IGLVMSYVAEDTALQASGYFRPWRVQPFVDLYGRRFHIGSIRGVNVIYALTGQRRLNAAV 363 +GLV + + ALQ SG + P VD+ GRRFH G++ G +++Y TG +N A Sbjct: 29 LGLVFTSDNNERALQDSGLYSPDSEDSSVDIAGRRFHSGTLNGSSIVYVKTGSHSVNMAT 88 Query: 364 TVQTLLDVFTVSGIVHYGTAGS-SNDSMSFGDVSVPKLVAYTGAWTWKKYKSLKEASTEL 540 T+Q LL F++ G++++G AGS +M GDVSVP+ VA+TG WKK++S K +L Sbjct: 89 TLQILLARFSIHGVIYFGNAGSLDKKTMVPGDVSVPQAVAFTGVCNWKKFRSEK---GKL 145 Query: 541 SFGQFNVPDEGENLLGSLKYRNEELYSVGKPMEEVFWLPVDSAWFKIA-EGLK-VTLERC 714 FG FN P+ GENLLG+++Y +++S + +EVFWLP+ +W+ A E LK + L +C Sbjct: 146 VFGDFNYPENGENLLGTVEYEKIKMFSPSEAPKEVFWLPITKSWYNAATEALKDMKLRKC 205 Query: 715 NDTFCLPKTPQVVHGLKGASADMFLDNAEYRKFLFREFAVSTIDEESAAVVMTTTSPGVP 894 CLP P+VV G K +++D ++ N Y FL F T D SA+V +T+ S Sbjct: 206 YSDECLPGEPKVVFGSKSSTSDFYVRNKAYGDFLNDNFDAKTADTTSASVALTSLSNEKL 265 Query: 895 VIVFRGVSDLAGGEPTWSSTSLMNLASINALKVAVEFIATI 1017 +VF+GVS++AG T S++ + LAS NA A +FI +I Sbjct: 266 FVVFQGVSNVAG--ETSSNSRVSYLASYNAFLAATKFINSI 304
>Q89AQ7:MTNN_BUCBP MTA/SAH nucleosidase - Buchnera aphidicola subsp. Baizongia pistaciae| Length = 252 Score = 53.9 bits (128), Expect = 1e-06 Identities = 53/245 (21%), Positives = 99/245 (40%), Gaps = 2/245 (0%) Frame = +1 Query: 289 FHIGSIRGVNVIYALTGQRRLNAAVTVQTLLDVFTVSGIVHYGTAGSSNDSMSFGDVSVP 468 F+IG+I ++V+ A +G ++ + +T LL + V I++ G+AGS N ++ G + +P Sbjct: 41 FYIGNIHNIHVVLAKSGVGKVFSGITCALLLQKYKVKFIINIGSAGSLNKNLKPGSIIIP 100 Query: 469 KLVAYTGAWTWKKYKSLKEASTELSFGQF-NVPDEGENLLGSLKYRNEELYSVGKPMEEV 645 V Y + + S GQ N P + LK + L+ Sbjct: 101 TNVC---------YHDVNLTAFGYSIGQIKNCPKTFLSNTLMLKLTEKYLFEN------- 144 Query: 646 FWLPVDSAWFKIAEGLKVTLERCNDTFCLPKTPQVVHGLKGASADMFLDNAEYRKFLFRE 825 KI K+ + S D+F+D E + L + Sbjct: 145 ----------KIKYQKKLMI----------------------SGDIFIDTCEKKSLLKKR 172 Query: 826 FAVS-TIDEESAAVVMTTTSPGVPVIVFRGVSDLAGGEPTWSSTSLMNLASINALKVAVE 1002 F + +D E+AA+ +P+++ + +SD + + +NLAS N+ V + Sbjct: 173 FPKAIAVDMEAAAIAHVCYQFNIPILIIKSISDSSDINAADNFKYFINLASKNSSLVTIN 232 Query: 1003 FIATI 1017 + T+ Sbjct: 233 VLQTL 237
>P96122:MTNN_TREPA MTA/SAH nucleosidase - Treponema pallidum| Length = 269 Score = 53.5 bits (127), Expect = 2e-06 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 4/223 (1%) Frame = +1 Query: 280 GRRFHIGSIRGVNVIYALTGQRRLNAAVTVQTLLDVFTVSGIVHYGTAGSSNDSMSFGDV 459 G F++ S+ + V+Y G ++NAA+ Q L+ F +++ G AG+ ++ + DV Sbjct: 29 GLTFYVVSVGALQVVYVCGGVGKVNAALCTQLLISEFGARVLINTGIAGALDERLCVFDV 88 Query: 460 SVPKLVAY----TGAWTWKKYKSLKEASTELSFGQFNVPDEGENLLGSLKYRNEELYSVG 627 V A+ ++K + + S E + +L+Y E + + Sbjct: 89 LVSVDAVQHDVDVTAFGYQKGRIPRMDSVEWTANT------------ALRYLVREAFDL- 135 Query: 628 KPMEEVFWLPVDSAWFKIAEGLKVTLERCNDTFCLPKTPQVVHGLKGASADMFLDNAEYR 807 D W + A L + + + + ++V G + AS D+F+ +A+ R Sbjct: 136 --------CTRDPEWTEGACALSGSGDPPS------RVSRLVEG-RVASGDLFVSDAQTR 180 Query: 808 KFLFREFAVSTIDEESAAVVMTTTSPGVPVIVFRGVSDLAGGE 936 + REF ++ E AA + GVP ++ R +SD AG E Sbjct: 181 ARIIREFGAHGVEMEGAAFAHVASVNGVPFVIIRCISDGAGAE 223
>O51931:MTNN_BUCAP MTA/SAH nucleosidase - Buchnera aphidicola subsp. Schizaphis graminum| Length = 235 Score = 48.1 bits (113), Expect = 7e-05 Identities = 46/250 (18%), Positives = 96/250 (38%), Gaps = 1/250 (0%) Frame = +1 Query: 286 RFHIGSIRGVNVIYALTGQRRLNAAVTVQTLLDVFTVSGIVHYGTAGSSNDSMSFGDVSV 465 + + G+ + + + L+G +++A+++ +++F I++ G+AGS N + GD+ + Sbjct: 32 KIYTGTFKKIEIFLILSGIGKVSASMSTTISINLFQPDFIINSGSAGSLNACLKIGDIII 91 Query: 466 PKLVAYTGAWTWKKYKSLKEASTELSFGQFNVPDEGENLLGSLKYRNEELYSVGKPMEEV 645 PK Y T + + +P+ + + K + E+ Sbjct: 92 PKKTCYYDV-----------DLTNFGYSKGQIPE------------YPQTFKTNKNLREI 128 Query: 646 FWLPVDSAWFKIAEGLKVTLERCNDTFCLPKTPQVVHGLKGASADMFLDNAEYRKFLFRE 825 FK GL VT D F+ + K + + Sbjct: 129 LKEIAVEFKFKFLTGLLVT------------------------GDSFIRKSNCIKKIKNQ 164 Query: 826 FAVST-IDEESAAVVMTTTSPGVPVIVFRGVSDLAGGEPTWSSTSLMNLASINALKVAVE 1002 F+ + +D ES A+ + +P I+ + +SDL+ T + +AS+ + K+ Sbjct: 165 FSSAIGVDMESTAIGQVCHNFKIPFIIIKSISDLSDNNATSHFEKNIPIASLKSSKLVKL 224 Query: 1003 FIATIGRQMS 1032 + I Q S Sbjct: 225 LLKKISSQNS 234
>O24915:MTNN_HELPY MTA/SAH nucleosidase - Helicobacter pylori (Campylobacter pylori)| Length = 231 Score = 47.4 bits (111), Expect = 1e-04 Identities = 50/242 (20%), Positives = 94/242 (38%), Gaps = 1/242 (0%) Frame = +1 Query: 268 VDLYGRRFHIGSIRGVNVIYALTGQRRLNAAVTVQTLLDVFTVSGIVHYGTAGSSNDSMS 447 + L G FH G +I A + ++++ +T +++ F V ++ G AGS + Sbjct: 29 IPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLK 88 Query: 448 FGDVSVPKLVAYTGAWTWKKYKSLKEASTELSFGQFNVPDEGENLLGSLKYRNEELYSVG 627 D+ V +++ ++ F+ P LG Sbjct: 89 INDLLV----------------AIQLVQHDVDLSAFDHP------LG------------- 113 Query: 628 KPMEEVFWLPVDSAWFKIAEGLK-VTLERCNDTFCLPKTPQVVHGLKGASADMFLDNAEY 804 ++P + + + +E L + E N+ + K + AS D F+ + E Sbjct: 114 -------FIPESAIFIETSESLNALAKEVANEQHIVLKEGVI------ASGDQFVHSKER 160 Query: 805 RKFLFREFAVSTIDEESAAVVMTTTSPGVPVIVFRGVSDLAGGEPTWSSTSLMNLASINA 984 ++FL EF S ++ E A+V GVP V R +SD A E S + + ++ + Sbjct: 161 KEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEEANMSFDAFLEKSAQTS 220 Query: 985 LK 990 K Sbjct: 221 AK 222
>O32028:MTNN_BACSU MTA/SAH nucleosidase - Bacillus subtilis| Length = 231 Score = 46.6 bits (109), Expect = 2e-04 Identities = 54/243 (22%), Positives = 105/243 (43%) Frame = +1 Query: 289 FHIGSIRGVNVIYALTGQRRLNAAVTVQTLLDVFTVSGIVHYGTAGSSNDSMSFGDVSVP 468 F G G VI +G ++NAA++ LLD + +++ G+AG + +++ GDV + Sbjct: 33 FTTGEYEGTEVILLKSGIGKVNAAISTTLLLDRYKPDYVINTGSAGGFHHTLNVGDVVIS 92 Query: 469 KLVAYTGAWTWKKYKSLKEASTELSFGQFNVPDEGENLLGSLKYRNEELYSVGKPMEEVF 648 T ++ + + + +GQ VP L + +E+L S+ + E V Sbjct: 93 ---------TDVRHHDVDVTAFDYEYGQ--VPG-----LPAAYAADEKLISITE--EAVS 134 Query: 649 WLPVDSAWFKIAEGLKVTLERCNDTFCLPKTPQVVHGLKGASADMFLDNAEYRKFLFREF 828 L ++A+G T D+F P+ V ++ +D++ Sbjct: 135 ELD----GIQVAKGTIAT----GDSFM--NDPKRVEEVRARFSDLY-------------- 170 Query: 829 AVSTIDEESAAVVMTTTSPGVPVIVFRGVSDLAGGEPTWSSTSLMNLASINALKVAVEFI 1008 ++ E+AAV P +V R +SD+AG E S + A++++ ++ ++ I Sbjct: 171 ---AVEMEAAAVAQVCHQFKTPFVVIRALSDIAGKESHVSFDQFLEQAAVHSTELVLKVI 227 Query: 1009 ATI 1017 I Sbjct: 228 KRI 230
>P57306:MTNN_BUCAI MTA/SAH nucleosidase - Buchnera aphidicola subsp. Acyrthosiphon| pisum (Acyrthosiphon pisum symbiotic bacterium) Length = 232 Score = 43.5 bits (101), Expect = 0.002 Identities = 43/220 (19%), Positives = 84/220 (38%), Gaps = 1/220 (0%) Frame = +1 Query: 286 RFHIGSIRGVNVIYALTGQRRLNAAVTVQTLLDVFTVSGIVHYGTAGSSNDSMSFGDVSV 465 + +IG + +V +G +++A+V L+D++ I++ G+AGS + GD+ + Sbjct: 32 KIYIGKFKSHDVFLIKSGIGKVSASVATMILIDLYKPDTIINSGSAGSLQSFLKIGDIII 91 Query: 466 PKLVAYTGAWTWKKYKSLKEASTELSFGQFNVPDEGENLLGSLKYRNEELYSVGKPMEEV 645 PK Y T + + +P Y E ++V + + Sbjct: 92 PKKTCYYDV-----------DLTNFGYTRGQIPG----------YPKE--FTVNEKICNF 128 Query: 646 FWLPVDSAWFKIAEGLKVTLERCNDTFCLPKTPQVVHGLKGASADMFLDNAEYRKFLFRE 825 F D K +GL + S D F+ E K L ++ Sbjct: 129 FKKNADKYQLKYIKGLIL------------------------SGDTFVRENESIKILKKQ 164 Query: 826 F-AVSTIDEESAAVVMTTTSPGVPVIVFRGVSDLAGGEPT 942 F + ++ ES+A+ +P+I+ + +SD + T Sbjct: 165 FPSAIAVEMESSAIAQVCYKFNIPLIIIKSISDESDNNAT 204
>Q50673:Y2293_MYCTU Uncharacterized protein Rv2293c/MT2350 precursor - Mycobacterium| tuberculosis Length = 246 Score = 43.1 bits (100), Expect = 0.002 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%) Frame = +1 Query: 262 PFVDLYGRRFHIGSIRGVNVIYALTGQRRLNAAVTVQTLLDVFT------VSGIVHYGTA 423 P V RR+++GSI G VI A+TG +NA T +T FT ++ ++ G A Sbjct: 62 PVVVADRRRYYLGSISGKKVIVAMTGIGLVNATNTTETAFARFTCASSIAIAAVMFSGVA 121 Query: 424 GSSNDSMSFGDVSVP 468 G + + S GDV++P Sbjct: 122 GGAGRT-SIGDVAIP 135
>Q9ZMY2:MTNN_HELPJ MTA/SAH nucleosidase - Helicobacter pylori J99 (Campylobacter| pylori J99) Length = 230 Score = 42.0 bits (97), Expect = 0.005 Identities = 21/53 (39%), Positives = 29/53 (54%) Frame = +1 Query: 769 ASADMFLDNAEYRKFLFREFAVSTIDEESAAVVMTTTSPGVPVIVFRGVSDLA 927 AS D F+ + E ++FL EF S ++ E A+V GVP V R +SD A Sbjct: 148 ASGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNA 200
>Q5HCP3:SRAP_STAAC Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain COL) Length = 2261 Score = 36.6 bits (83), Expect = 0.23 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 5/140 (3%) Frame = -1 Query: 917 DTPRNTITGTPGDVVVITTAALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP*TTCGV 738 D+ NTI+GTP ++ T + +S+ + N F+Y +MS S T Sbjct: 710 DSTNNTISGTPTNIGTSTISIVSTDA--SGNKTTTTFKYEVTRNSMSDSVSTSGST---- 763 Query: 737 FGKQKVSLHLSR-----VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFS 573 +Q S+ S+ + S S + + S K++S+ L S+S S Sbjct: 764 --QQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSESNSV 821 Query: 572 PSSGTLNCPKLSSVDASLSD 513 SS + + SV +S+SD Sbjct: 822 SSSTSTSLVNSQSVSSSMSD 841
>Q2FUW1:SRAP_STAA8 Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain NCTC 8325) Length = 2271 Score = 36.6 bits (83), Expect = 0.23 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 5/140 (3%) Frame = -1 Query: 917 DTPRNTITGTPGDVVVITTAALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP*TTCGV 738 D+ NTI+GTP ++ T + +S+ + N F+Y +MS S T Sbjct: 710 DSTNNTISGTPTNIGTSTISIVSTDA--SGNKTTTTFKYEVTRNSMSDSVSTSGST---- 763 Query: 737 FGKQKVSLHLSR-----VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFS 573 +Q S+ S+ + S S + + S K++S+ L S+S S Sbjct: 764 --QQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSESNSV 821 Query: 572 PSSGTLNCPKLSSVDASLSD 513 SS + + SV +S+SD Sbjct: 822 SSSTSTSLVNSQSVSSSMSD 841
>Q2FDK5:SRAP_STAA3 Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain USA300) Length = 2271 Score = 36.6 bits (83), Expect = 0.23 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 5/140 (3%) Frame = -1 Query: 917 DTPRNTITGTPGDVVVITTAALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP*TTCGV 738 D+ NTI+GTP ++ T + +S+ + N F+Y +MS S T Sbjct: 710 DSTNNTISGTPTNIGTSTISIVSTDA--SGNKTTTTFKYEVTRNSMSDSVSTSGST---- 763 Query: 737 FGKQKVSLHLSR-----VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFS 573 +Q S+ S+ + S S + + S K++S+ L S+S S Sbjct: 764 --QQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSESNSV 821 Query: 572 PSSGTLNCPKLSSVDASLSD 513 SS + + SV +S+SD Sbjct: 822 SSSTSTSLVNSQSVSSSMSD 841
>Q8NUJ3:SRAP_STAAW Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain MW2) Length = 2275 Score = 36.2 bits (82), Expect = 0.29 Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 5/140 (3%) Frame = -1 Query: 917 DTPRNTITGTPGDVVVITTAALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP*TTCGV 738 D+ NTI+GTP ++ T +S+ + N F+Y +MS S T Sbjct: 710 DSTNNTISGTPTNIGTSTITIVSTDA--SGNKTTTTFKYEVTRNSMSDSVSTSGST---- 763 Query: 737 FGKQKVSLHLSR-----VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFS 573 +Q S+ S+ + S S + + S K++S+ L S+S S Sbjct: 764 --QQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSESNSV 821 Query: 572 PSSGTLNCPKLSSVDASLSD 513 SS + + SV +S+SD Sbjct: 822 SSSTSTSLVNSQSVSSSMSD 841
>Q8VQ99:SRAP_STAAU Serine-rich adhesin for platelets precursor - Staphylococcus aureus| Length = 2283 Score = 36.2 bits (82), Expect = 0.29 Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 5/140 (3%) Frame = -1 Query: 917 DTPRNTITGTPGDVVVITTAALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP*TTCGV 738 D+ NTI+GTP ++ T +S+ + N F+Y +MS S T Sbjct: 710 DSTNNTISGTPTNIGTSTITIVSTDA--SGNKTTTTFKYEVTRNSMSDSVSTSGST---- 763 Query: 737 FGKQKVSLHLSR-----VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFS 573 +Q S+ S+ + S S + + S K++S+ L S+S S Sbjct: 764 --QQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSESNSV 821 Query: 572 PSSGTLNCPKLSSVDASLSD 513 SS + + SV +S+SD Sbjct: 822 SSSTSTSLVNSQSVSSSMSD 841
>Q6G620:SRAP_STAAS Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain MSSA476) Length = 2275 Score = 36.2 bits (82), Expect = 0.29 Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 5/140 (3%) Frame = -1 Query: 917 DTPRNTITGTPGDVVVITTAALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP*TTCGV 738 D+ NTI+GTP ++ T +S+ + N F+Y +MS S T Sbjct: 710 DSTNNTISGTPTNIGTSTITIVSTDA--SGNKTTTTFKYEVTRNSMSDSVSTSGST---- 763 Query: 737 FGKQKVSLHLSR-----VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFS 573 +Q S+ S+ + S S + + S K++S+ L S+S S Sbjct: 764 --QQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSESNSV 821 Query: 572 PSSGTLNCPKLSSVDASLSD 513 SS + + SV +S+SD Sbjct: 822 SSSTSTSLVNSQSVSSSMSD 841
>Q02505:MUC3A_HUMAN Mucin-3A precursor - Homo sapiens (Human)| Length = 2541 Score = 35.4 bits (80), Expect = 0.50 Identities = 66/304 (21%), Positives = 109/304 (35%), Gaps = 13/304 (4%) Frame = -1 Query: 914 TPRNTITGTPGDVVVITT--AALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP*TTCG 741 TP + T TP T + S+ + TA L F S+ S + P SP Sbjct: 535 TPSSLSTDTPSTTPTTITYPSVGSTGFLTTATDLTSTFTVSSSSAMSKSVIPSSP----- 589 Query: 740 VFGKQKVSLHLSRVTLSPSAILNHAESTGNQKTSSI--GLPTEYSSSFLYFRDPSRFSPS 567 + S +S + + ++ ST + TSS+ P+ YS S S + S Sbjct: 590 SIQNTETSSLVSMTSATTPSLRPTITSTDSTLTSSLLTTFPSTYSFS------SSMSASS 643 Query: 566 SGTLNCPKLSSVDASLSDLYFFHVQAPV*ATNLGTLTSPN---DIESLELPAVP*WTIPD 396 +GT + +SS+ AS + ++ A T TSP ++ T P Sbjct: 644 AGTTHTETISSLPASTNTIHTTAESALAPTTTTSFTTSPTMEPPSTTVATTGTGQTTFPS 703 Query: 395 TVKTSRRVCTVT-----AAFNLRCPVNAYITFTPRILPM*NLRP*RSTKGW-TRQGRK*P 234 + T T+T + +L + + T I P + R+T W T P Sbjct: 704 STATFLETTTLTPTTDFSTESLTTAMTSTPPITSSITPTDTMTSMRTTTSWPTATNTLSP 763 Query: 233 EAWSAVSSATYDMTSPMDGPRLFALSTCCLTLSIPGSAGRAVVDDPASKQNSRTSGRRES 54 S +SS T L ++P + R+ + + +S TS ES Sbjct: 764 LTSSILSSTPVPSTEVTTSHTTNTNPVSTLVTTLPITITRSTLTSETAYPSSPTSTVTES 823 Query: 53 SMAV 42 + + Sbjct: 824 TTEI 827
>Q7A362:SRAP_STAAN Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain N315) Length = 2271 Score = 34.3 bits (77), Expect = 1.1 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 5/139 (3%) Frame = -1 Query: 917 DTPRNTITGTPGDVVVITTAALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP*TTCGV 738 D+ NTI+GTP ++ T + +S+ + N F+Y +MS S T Sbjct: 710 DSTNNTISGTPTNIGTSTISIVSTDA--SGNKTTTTFKYEVTRNSMSDSVSTSGST---- 763 Query: 737 FGKQKVSLHLSR-----VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFS 573 +Q S+ S+ + S S + + S K++S+ L S+S S Sbjct: 764 --QQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSESNSV 821 Query: 572 PSSGTLNCPKLSSVDASLS 516 SS + + SV +S+S Sbjct: 822 SSSTSTSLVNSQSVSSSMS 840
>Q99QY4:SRAP_STAAM Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain Mu50 / ATCC 700699) Length = 2271 Score = 34.3 bits (77), Expect = 1.1 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 5/139 (3%) Frame = -1 Query: 917 DTPRNTITGTPGDVVVITTAALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP*TTCGV 738 D+ NTI+GTP ++ T + +S+ + N F+Y +MS S T Sbjct: 710 DSTNNTISGTPTNIGTSTISIVSTDA--SGNKTTTTFKYEVTRNSMSDSVSTSGST---- 763 Query: 737 FGKQKVSLHLSR-----VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFS 573 +Q S+ S+ + S S + + S K++S+ L S+S S Sbjct: 764 --QQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSESNSV 821 Query: 572 PSSGTLNCPKLSSVDASLS 516 SS + + SV +S+S Sbjct: 822 SSSTSTSLVNSQSVSSSMS 840
>Q7U3Z7:HRCA_SYNPX Heat-inducible transcription repressor hrcA - Synechococcus sp.| (strain WH8102) Length = 324 Score = 34.3 bits (77), Expect = 1.1 Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +1 Query: 733 PKTPQVVHGLKGASAD-MFLDNAEYRKFLFREFAVSTIDEESAAVVMTTTSPGV 891 P+TP VVHGL A+ F AE R L ID++ AVV T PGV Sbjct: 217 PETPLVVHGLSRLVAEPEFHSTAELRPLL------ELIDDQPCAVVSATDQPGV 264
>Q6GDE9:SRAP_STAAR Serine-rich adhesin for platelets precursor - Staphylococcus aureus| (strain MRSA252) Length = 1351 Score = 33.9 bits (76), Expect = 1.5 Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 5/139 (3%) Frame = -1 Query: 917 DTPRNTITGTPGDVVVITTAALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP*TTCGV 738 D+ NTI+GTP ++ T +S+ + N F+Y +MS S T Sbjct: 710 DSTNNTISGTPTNIGTSTITIVSTDA--SGNKTTTTFKYEVTRNSMSDSVSTSGST---- 763 Query: 737 FGKQKVSLHLSR-----VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFS 573 +Q S+ S+ + S S + + S K++S+ L S+S S Sbjct: 764 --QQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSESNSV 821 Query: 572 PSSGTLNCPKLSSVDASLS 516 SS + + SV +S+S Sbjct: 822 SSSTSTSLVNSQSVSSSMS 840
>P53214:MTL1_YEAST Protein MTL1 precursor - Saccharomyces cerevisiae (Baker's yeast)| Length = 551 Score = 33.5 bits (75), Expect = 1.9 Identities = 38/144 (26%), Positives = 66/144 (45%) Frame = -1 Query: 935 SPPARSDTPRNTITGTPGDVVVITTAALSSSIVDTANSLKRNFRYSALSRNMSADAPFSP 756 SP + S T ++ + P V T++ ++SS + T++SL +S + S S Sbjct: 132 SPSSSSSTIISSSSSLPTFTVASTSSTVASSTLSTSSSL-------VISTSSSTFTFSSE 184 Query: 755 *TTCGVFGKQKVSLHLSRVTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRF 576 ++ + S+ S V + PS+ + S+ ++ TSS + SSS L+ S Sbjct: 185 SSSSLISSSISTSVSTSSVYV-PSSSTSSPPSSSSELTSS-SYSSSSSSSTLFSYSSSFS 242 Query: 575 SPSSGTLNCPKLSSVDASLSDLYF 504 S SS + + SS +S S YF Sbjct: 243 SSSSSSSSSSSSSSSSSSSSSSYF 266
>P17779:RDRP_PVXX3 RNA replication protein - Potato virus X (strain X3) (PVX)| Length = 1456 Score = 32.7 bits (73), Expect = 3.3 Identities = 20/61 (32%), Positives = 30/61 (49%) Frame = -1 Query: 701 VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFSPSSGTLNCPKLSSVDAS 522 V + P + + + T K + I T Y S L+F DPS + NCPKL ++ A+ Sbjct: 117 VAIEPRDVARYPKETIIDKLTEITTETAYISDTLHFLDPSYIVET--FQNCPKLQTLYAT 174 Query: 521 L 519 L Sbjct: 175 L 175
>Q07630:RDRP_PVXHB RNA replication protein - Potato virus X (strain HB) (PVX)| Length = 1456 Score = 32.7 bits (73), Expect = 3.3 Identities = 20/61 (32%), Positives = 30/61 (49%) Frame = -1 Query: 701 VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFSPSSGTLNCPKLSSVDAS 522 V + P + + + T K + I T Y S L+F DPS + NCPKL ++ A+ Sbjct: 117 VAIEPRDVARYPKETIIHKLAEIKTDTAYISDTLHFLDPSYIVET--FQNCPKLQTLYAT 174 Query: 521 L 519 L Sbjct: 175 L 175
>P22591:RDRP_PVXCP RNA replication protein - Potato virus X (strain CP) (PVX)| Length = 1456 Score = 32.7 bits (73), Expect = 3.3 Identities = 20/61 (32%), Positives = 30/61 (49%) Frame = -1 Query: 701 VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFSPSSGTLNCPKLSSVDAS 522 V + P + + + T K + I T Y S L+F DPS + NCPKL ++ A+ Sbjct: 117 VAIEPRDVARYPKETIIHKLAEIETDTAYISDTLHFLDPSYIVET--FQNCPKLQTLYAT 174 Query: 521 L 519 L Sbjct: 175 L 175
>P32323:AGA1_YEAST A-agglutinin anchorage subunit precursor - Saccharomyces cerevisiae| (Baker's yeast) Length = 725 Score = 31.6 bits (70), Expect = 7.3 Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 4/185 (2%) Frame = -1 Query: 935 SPPARSDTPRNTITGTPGDVVVITTAALSSSIVDTA---NSLKRNFRYSALSRNMSADAP 765 SP + S +P +T T + ++ + SSS T+ S + ++ S ++ + Sbjct: 192 SPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSS 251 Query: 764 FSP*TTCGVFGKQKVSLHLSRVTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDP 585 S ++ S S + SPS+ A ST S+ P+ SSS P Sbjct: 252 TSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSS------P 305 Query: 584 SRFSPSSGTLNCPKLSSVDASLSDLYFFHVQAPV*ATNLG-TLTSPNDIESLELPAVP*W 408 + S S P +S+ ++ +D ++LG ++ S + SL P+ P + Sbjct: 306 TLASTS------PSSTSISSTFTDS----------TSSLGSSIASSSTSVSLYSPSTPVY 349 Query: 407 TIPDT 393 ++P T Sbjct: 350 SVPST 354
>P33666:YDBA_ECOLI Putative uncharacterized protein ydbA - Escherichia coli| Length = 2003 Score = 31.2 bits (69), Expect = 9.5 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = -3 Query: 315 HTSNTPDVKPPSVEVNEGLDTPGPEVAGGLERGVLSDVRHDEPDGRAAPVRPV 157 H +N+P PP+ +E DTP P GG ++ D+PD P +PV Sbjct: 96 HRNNSP--LPPTPPDDESDDTPVPPTPGG------DEIIPDDPDDTPTPPKPV 140
>P09395:RDRP_PVX RNA replication protein - Potato virus X (PVX)| Length = 1456 Score = 31.2 bits (69), Expect = 9.5 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = -1 Query: 701 VTLSPSAILNHAESTGNQKTSSIGLPTEYSSSFLYFRDPSRFSPSSGTLNCPKLSSVDAS 522 V + P + + + T K + I T Y L+F DPS + NCPKL ++ A+ Sbjct: 117 VAIEPRDVARYPKETIIDKLTEITTDTAYIGDTLHFLDPSYIVET--FQNCPKLQTLYAT 174 Query: 521 L 519 L Sbjct: 175 L 175 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 214,643,129 Number of extensions: 4748483 Number of successful extensions: 13370 Number of sequences better than 10.0: 28 Number of HSP's gapped: 13357 Number of HSP's successfully gapped: 30 Length of query: 419 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 303 Effective length of database: 68,868,219 Effective search space: 20867070357 Effective search space used: 20867070357 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
