| Clone Name | FLbaf80m16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001063126.1| Oryza sativa (japonica cultivar-group) Os06g0112100 (Os06g0112100) mRNA, complete cds Length = 1292 Score = 884 bits (446), Expect = 0.0 Identities = 773/882 (87%) Strand = Plus / Plus Query: 133 atggacagggtgaggcagcaggtcgacagggcgaacaggcgcggcccgtccatcgggctc 192 |||||||||||||| ||||||||||| || ||| |||| |||| |||||||||||| Sbjct: 150 atggacagggtgagatggcaggtcgacaaggtcaaccggcggggccattccatcgggctc 209 Query: 193 gtcatgtcgtacgtcgctgaggacaccgcgctccaggcctccggctacttccggccctgg 252 |||||||||||| ||| ||||| ||| || || | |||||||||||||| | || ||| Sbjct: 210 gtcatgtcgtacatcgatgaggccactgctcttgaatcctccggctacttcagaccttgg 269 Query: 253 cgtgtccagcccttcgttgacctctacggacggaggtttcacatcgggagtattcgaggt 312 | ||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||| Sbjct: 270 catgtcctccccttcgttgacctctacggacgaaggtatcacatcgggagtattagaggt 329 Query: 313 gtgaatgttatatacgcattgacagggcaacgcaggttgaatgcagctgtcactgtacaa 372 || ||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 330 gtcaatgttatatatgcactgacaggacaacgcaggttaaatgcggctgtgactgtacag 389 Query: 373 actctcctcgacgtcttcaccgtgtctggtattgtccattatggcacggcaggaagctct 432 |||||| |||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 390 actctcatcgacgtctttactgtgtctggcattgttcattatggcacagcaggaagttct 449 Query: 433 aatgattcaatgtcatttggagatgtcagtgtccccaagttagttgcttatacaggcgcc 492 |||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || Sbjct: 450 aatgattcaatgtcatttggcgatgtcagtgtccccaaatttgttgcttatacaagtgct 509 Query: 493 tggacatggaagaagtacaaatcacttaaagaagcatcaacagaactaagctttggacaa 552 |||||||||||||||| |||||||| ||||| | |||||||| ||||||||| | Sbjct: 510 tggacatggaagaagttcaaatcaccaaaagagtcggatacagaacttagctttggagat 569 Query: 553 tttaatgtcccggatgaaggagagaacctgctagggtctctgaaatacagaaatgaggag 612 |||| |||||| ||| ||||||||| || ||||| ||||||||| ||||||||||||| Sbjct: 570 tttactgtcccaaatggaggagagaatcttctaggagctctgaaattcagaaatgaggag 629 Query: 613 ctatactcagttggtaagcctatggaagaagttttttggttacctgtagattcagcatgg 672 ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 630 ctatactcagtgggtaagcctatgaaagaagttttctggttacctgtagattcagcatgg 689 Query: 673 ttcaagatagcagaaggacttaaggtcacccttgaaaggtgtaatgacactttctgctta 732 ||||| || ||||||||||||||||| | |||||||| ||||| |||||||||||||| Sbjct: 690 ttcaaaatcgcagaaggacttaaggtttcacttgaaagatgtaacgacactttctgcttg 749 Query: 733 ccaaaaaccccacaagtggttcatgggctaaaaggagcatccgccgacatgtttctagac 792 |||| ||| ||| |||| || ||||||||||||| | || || || |||||||||||| Sbjct: 750 ccaacaactccaaaagtagtctgtgggctaaaaggatcgtcagctgatatgtttctagac 809 Query: 793 aatgcagaataccggaagttccttttcagagaatttgcggtgtcaacaatagatgaggaa 852 ||||||||||| |||||||||||||||||||||||| || |||||| |||||||||| Sbjct: 810 aatgcagaatataggaagttccttttcagagaatttggtgtatcaacagtagatgaggag 869 Query: 853 agcgcagcagtggtgatgacaacaacatctcctggcgtacctgtgattgtgttccgggga 912 || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 870 agtgcagcagtggtgatgacaacaacatctcctggcatacctgtgattgtattccgggga 929 Query: 913 gtatctgatctggctggaggggaaccaacatggtcatcaacaagcctgatgaacctggcg 972 || |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 930 gtttctgatttggctggaggggagccaacatggtcgtcaacaagcctgatgaacctggca 989 Query: 973 tctattaatgcactcaaagtggcagtggagttcattgctaca 1014 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 990 tctattaatgcactcaaagtggcagtggagtttattgctaca 1031
>dbj|AK104612.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D05, full insert sequence Length = 1289 Score = 884 bits (446), Expect = 0.0 Identities = 773/882 (87%) Strand = Plus / Plus Query: 133 atggacagggtgaggcagcaggtcgacagggcgaacaggcgcggcccgtccatcgggctc 192 |||||||||||||| ||||||||||| || ||| |||| |||| |||||||||||| Sbjct: 115 atggacagggtgagatggcaggtcgacaaggtcaaccggcggggccattccatcgggctc 174 Query: 193 gtcatgtcgtacgtcgctgaggacaccgcgctccaggcctccggctacttccggccctgg 252 |||||||||||| ||| ||||| ||| || || | |||||||||||||| | || ||| Sbjct: 175 gtcatgtcgtacatcgatgaggccactgctcttgaatcctccggctacttcagaccttgg 234 Query: 253 cgtgtccagcccttcgttgacctctacggacggaggtttcacatcgggagtattcgaggt 312 | ||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||| Sbjct: 235 catgtcctccccttcgttgacctctacggacgaaggtatcacatcgggagtattagaggt 294 Query: 313 gtgaatgttatatacgcattgacagggcaacgcaggttgaatgcagctgtcactgtacaa 372 || ||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 295 gtcaatgttatatatgcactgacaggacaacgcaggttaaatgcggctgtgactgtacag 354 Query: 373 actctcctcgacgtcttcaccgtgtctggtattgtccattatggcacggcaggaagctct 432 |||||| |||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 355 actctcatcgacgtctttactgtgtctggcattgttcattatggcacagcaggaagttct 414 Query: 433 aatgattcaatgtcatttggagatgtcagtgtccccaagttagttgcttatacaggcgcc 492 |||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || Sbjct: 415 aatgattcaatgtcatttggcgatgtcagtgtccccaaatttgttgcttatacaagtgct 474 Query: 493 tggacatggaagaagtacaaatcacttaaagaagcatcaacagaactaagctttggacaa 552 |||||||||||||||| |||||||| ||||| | |||||||| ||||||||| | Sbjct: 475 tggacatggaagaagttcaaatcaccaaaagagtcggatacagaacttagctttggagat 534 Query: 553 tttaatgtcccggatgaaggagagaacctgctagggtctctgaaatacagaaatgaggag 612 |||| |||||| ||| ||||||||| || ||||| ||||||||| ||||||||||||| Sbjct: 535 tttactgtcccaaatggaggagagaatcttctaggagctctgaaattcagaaatgaggag 594 Query: 613 ctatactcagttggtaagcctatggaagaagttttttggttacctgtagattcagcatgg 672 ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 595 ctatactcagtgggtaagcctatgaaagaagttttctggttacctgtagattcagcatgg 654 Query: 673 ttcaagatagcagaaggacttaaggtcacccttgaaaggtgtaatgacactttctgctta 732 ||||| || ||||||||||||||||| | |||||||| ||||| |||||||||||||| Sbjct: 655 ttcaaaatcgcagaaggacttaaggtttcacttgaaagatgtaacgacactttctgcttg 714 Query: 733 ccaaaaaccccacaagtggttcatgggctaaaaggagcatccgccgacatgtttctagac 792 |||| ||| ||| |||| || ||||||||||||| | || || || |||||||||||| Sbjct: 715 ccaacaactccaaaagtagtctgtgggctaaaaggatcgtcagctgatatgtttctagac 774 Query: 793 aatgcagaataccggaagttccttttcagagaatttgcggtgtcaacaatagatgaggaa 852 ||||||||||| |||||||||||||||||||||||| || |||||| |||||||||| Sbjct: 775 aatgcagaatataggaagttccttttcagagaatttggtgtatcaacagtagatgaggag 834 Query: 853 agcgcagcagtggtgatgacaacaacatctcctggcgtacctgtgattgtgttccgggga 912 || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 835 agtgcagcagtggtgatgacaacaacatctcctggcatacctgtgattgtattccgggga 894 Query: 913 gtatctgatctggctggaggggaaccaacatggtcatcaacaagcctgatgaacctggcg 972 || |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 895 gtttctgatttggctggaggggagccaacatggtcgtcaacaagcctgatgaacctggca 954 Query: 973 tctattaatgcactcaaagtggcagtggagttcattgctaca 1014 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 955 tctattaatgcactcaaagtggcagtggagtttattgctaca 996
>dbj|AK104422.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-D08, full insert sequence Length = 1279 Score = 884 bits (446), Expect = 0.0 Identities = 773/882 (87%) Strand = Plus / Plus Query: 133 atggacagggtgaggcagcaggtcgacagggcgaacaggcgcggcccgtccatcgggctc 192 |||||||||||||| ||||||||||| || ||| |||| |||| |||||||||||| Sbjct: 137 atggacagggtgagatggcaggtcgacaaggtcaaccggcggggccattccatcgggctc 196 Query: 193 gtcatgtcgtacgtcgctgaggacaccgcgctccaggcctccggctacttccggccctgg 252 |||||||||||| ||| ||||| ||| || || | |||||||||||||| | || ||| Sbjct: 197 gtcatgtcgtacatcgatgaggccactgctcttgaatcctccggctacttcagaccttgg 256 Query: 253 cgtgtccagcccttcgttgacctctacggacggaggtttcacatcgggagtattcgaggt 312 | ||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||| Sbjct: 257 catgtcctccccttcgttgacctctacggacgaaggtatcacatcgggagtattagaggt 316 Query: 313 gtgaatgttatatacgcattgacagggcaacgcaggttgaatgcagctgtcactgtacaa 372 || ||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 317 gtcaatgttatatatgcactgacaggacaacgcaggttaaatgcggctgtgactgtacag 376 Query: 373 actctcctcgacgtcttcaccgtgtctggtattgtccattatggcacggcaggaagctct 432 |||||| |||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 377 actctcatcgacgtctttactgtgtctggcattgttcattatggcacagcaggaagttct 436 Query: 433 aatgattcaatgtcatttggagatgtcagtgtccccaagttagttgcttatacaggcgcc 492 |||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || Sbjct: 437 aatgattcaatgtcatttggcgatgtcagtgtccccaaatttgttgcttatacaagtgct 496 Query: 493 tggacatggaagaagtacaaatcacttaaagaagcatcaacagaactaagctttggacaa 552 |||||||||||||||| |||||||| ||||| | |||||||| ||||||||| | Sbjct: 497 tggacatggaagaagttcaaatcaccaaaagagtcggatacagaacttagctttggagat 556 Query: 553 tttaatgtcccggatgaaggagagaacctgctagggtctctgaaatacagaaatgaggag 612 |||| |||||| ||| ||||||||| || ||||| ||||||||| ||||||||||||| Sbjct: 557 tttactgtcccaaatggaggagagaatcttctaggagctctgaaattcagaaatgaggag 616 Query: 613 ctatactcagttggtaagcctatggaagaagttttttggttacctgtagattcagcatgg 672 ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 617 ctatactcagtgggtaagcctatgaaagaagttttctggttacctgtagattcagcatgg 676 Query: 673 ttcaagatagcagaaggacttaaggtcacccttgaaaggtgtaatgacactttctgctta 732 ||||| || ||||||||||||||||| | |||||||| ||||| |||||||||||||| Sbjct: 677 ttcaaaatcgcagaaggacttaaggtttcacttgaaagatgtaacgacactttctgcttg 736 Query: 733 ccaaaaaccccacaagtggttcatgggctaaaaggagcatccgccgacatgtttctagac 792 |||| ||| ||| |||| || ||||||||||||| | || || || |||||||||||| Sbjct: 737 ccaacaactccaaaagtagtctgtgggctaaaaggatcgtcagctgatatgtttctagac 796 Query: 793 aatgcagaataccggaagttccttttcagagaatttgcggtgtcaacaatagatgaggaa 852 ||||||||||| |||||||||||||||||||||||| || |||||| |||||||||| Sbjct: 797 aatgcagaatataggaagttccttttcagagaatttggtgtatcaacagtagatgaggag 856 Query: 853 agcgcagcagtggtgatgacaacaacatctcctggcgtacctgtgattgtgttccgggga 912 || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 857 agtgcagcagtggtgatgacaacaacatctcctggcatacctgtgattgtattccgggga 916 Query: 913 gtatctgatctggctggaggggaaccaacatggtcatcaacaagcctgatgaacctggcg 972 || |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 917 gtttctgatttggctggaggggagccaacatggtcgtcaacaagcctgatgaacctggca 976 Query: 973 tctattaatgcactcaaagtggcagtggagttcattgctaca 1014 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 977 tctattaatgcactcaaagtggcagtggagtttattgctaca 1018
>dbj|AK103951.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-E01, full insert sequence Length = 1267 Score = 884 bits (446), Expect = 0.0 Identities = 773/882 (87%) Strand = Plus / Plus Query: 133 atggacagggtgaggcagcaggtcgacagggcgaacaggcgcggcccgtccatcgggctc 192 |||||||||||||| ||||||||||| || ||| |||| |||| |||||||||||| Sbjct: 125 atggacagggtgagatggcaggtcgacaaggtcaaccggcggggccattccatcgggctc 184 Query: 193 gtcatgtcgtacgtcgctgaggacaccgcgctccaggcctccggctacttccggccctgg 252 |||||||||||| ||| ||||| ||| || || | |||||||||||||| | || ||| Sbjct: 185 gtcatgtcgtacatcgatgaggccactgctcttgaatcctccggctacttcagaccttgg 244 Query: 253 cgtgtccagcccttcgttgacctctacggacggaggtttcacatcgggagtattcgaggt 312 | ||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||| Sbjct: 245 catgtcctccccttcgttgacctctacggacgaaggtatcacatcgggagtattagaggt 304 Query: 313 gtgaatgttatatacgcattgacagggcaacgcaggttgaatgcagctgtcactgtacaa 372 || ||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 305 gtcaatgttatatatgcactgacaggacaacgcaggttaaatgcggctgtgactgtacag 364 Query: 373 actctcctcgacgtcttcaccgtgtctggtattgtccattatggcacggcaggaagctct 432 |||||| |||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 365 actctcatcgacgtctttactgtgtctggcattgttcattatggcacagcaggaagttct 424 Query: 433 aatgattcaatgtcatttggagatgtcagtgtccccaagttagttgcttatacaggcgcc 492 |||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || Sbjct: 425 aatgattcaatgtcatttggcgatgtcagtgtccccaaatttgttgcttatacaagtgct 484 Query: 493 tggacatggaagaagtacaaatcacttaaagaagcatcaacagaactaagctttggacaa 552 |||||||||||||||| |||||||| ||||| | |||||||| ||||||||| | Sbjct: 485 tggacatggaagaagttcaaatcaccaaaagagtcggatacagaacttagctttggagat 544 Query: 553 tttaatgtcccggatgaaggagagaacctgctagggtctctgaaatacagaaatgaggag 612 |||| |||||| ||| ||||||||| || ||||| ||||||||| ||||||||||||| Sbjct: 545 tttactgtcccaaatggaggagagaatcttctaggagctctgaaattcagaaatgaggag 604 Query: 613 ctatactcagttggtaagcctatggaagaagttttttggttacctgtagattcagcatgg 672 ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 605 ctatactcagtgggtaagcctatgaaagaagttttctggttacctgtagattcagcatgg 664 Query: 673 ttcaagatagcagaaggacttaaggtcacccttgaaaggtgtaatgacactttctgctta 732 ||||| || ||||||||||||||||| | |||||||| ||||| |||||||||||||| Sbjct: 665 ttcaaaatcgcagaaggacttaaggtttcacttgaaagatgtaacgacactttctgcttg 724 Query: 733 ccaaaaaccccacaagtggttcatgggctaaaaggagcatccgccgacatgtttctagac 792 |||| ||| ||| |||| || ||||||||||||| | || || || |||||||||||| Sbjct: 725 ccaacaactccaaaagtagtctgtgggctaaaaggatcgtcagctgatatgtttctagac 784 Query: 793 aatgcagaataccggaagttccttttcagagaatttgcggtgtcaacaatagatgaggaa 852 ||||||||||| |||||||||||||||||||||||| || |||||| |||||||||| Sbjct: 785 aatgcagaatataggaagttccttttcagagaatttggtgtatcaacagtagatgaggag 844 Query: 853 agcgcagcagtggtgatgacaacaacatctcctggcgtacctgtgattgtgttccgggga 912 || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 845 agtgcagcagtggtgatgacaacaacatctcctggcatacctgtgattgtattccgggga 904 Query: 913 gtatctgatctggctggaggggaaccaacatggtcatcaacaagcctgatgaacctggcg 972 || |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 905 gtttctgatttggctggaggggagccaacatggtcgtcaacaagcctgatgaacctggca 964 Query: 973 tctattaatgcactcaaagtggcagtggagttcattgctaca 1014 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 965 tctattaatgcactcaaagtggcagtggagtttattgctaca 1006
>dbj|AK061381.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H03, full insert sequence Length = 1292 Score = 884 bits (446), Expect = 0.0 Identities = 773/882 (87%) Strand = Plus / Plus Query: 133 atggacagggtgaggcagcaggtcgacagggcgaacaggcgcggcccgtccatcgggctc 192 |||||||||||||| ||||||||||| || ||| |||| |||| |||||||||||| Sbjct: 150 atggacagggtgagatggcaggtcgacaaggtcaaccggcggggccattccatcgggctc 209 Query: 193 gtcatgtcgtacgtcgctgaggacaccgcgctccaggcctccggctacttccggccctgg 252 |||||||||||| ||| ||||| ||| || || | |||||||||||||| | || ||| Sbjct: 210 gtcatgtcgtacatcgatgaggccactgctcttgaatcctccggctacttcagaccttgg 269 Query: 253 cgtgtccagcccttcgttgacctctacggacggaggtttcacatcgggagtattcgaggt 312 | ||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||| Sbjct: 270 catgtcctccccttcgttgacctctacggacgaaggtatcacatcgggagtattagaggt 329 Query: 313 gtgaatgttatatacgcattgacagggcaacgcaggttgaatgcagctgtcactgtacaa 372 || ||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 330 gtcaatgttatatatgcactgacaggacaacgcaggttaaatgcggctgtgactgtacag 389 Query: 373 actctcctcgacgtcttcaccgtgtctggtattgtccattatggcacggcaggaagctct 432 |||||| |||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 390 actctcatcgacgtctttactgtgtctggcattgttcattatggcacagcaggaagttct 449 Query: 433 aatgattcaatgtcatttggagatgtcagtgtccccaagttagttgcttatacaggcgcc 492 |||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || Sbjct: 450 aatgattcaatgtcatttggcgatgtcagtgtccccaaatttgttgcttatacaagtgct 509 Query: 493 tggacatggaagaagtacaaatcacttaaagaagcatcaacagaactaagctttggacaa 552 |||||||||||||||| |||||||| ||||| | |||||||| ||||||||| | Sbjct: 510 tggacatggaagaagttcaaatcaccaaaagagtcggatacagaacttagctttggagat 569 Query: 553 tttaatgtcccggatgaaggagagaacctgctagggtctctgaaatacagaaatgaggag 612 |||| |||||| ||| ||||||||| || ||||| ||||||||| ||||||||||||| Sbjct: 570 tttactgtcccaaatggaggagagaatcttctaggagctctgaaattcagaaatgaggag 629 Query: 613 ctatactcagttggtaagcctatggaagaagttttttggttacctgtagattcagcatgg 672 ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 630 ctatactcagtgggtaagcctatgaaagaagttttctggttacctgtagattcagcatgg 689 Query: 673 ttcaagatagcagaaggacttaaggtcacccttgaaaggtgtaatgacactttctgctta 732 ||||| || ||||||||||||||||| | |||||||| ||||| |||||||||||||| Sbjct: 690 ttcaaaatcgcagaaggacttaaggtttcacttgaaagatgtaacgacactttctgcttg 749 Query: 733 ccaaaaaccccacaagtggttcatgggctaaaaggagcatccgccgacatgtttctagac 792 |||| ||| ||| |||| || ||||||||||||| | || || || |||||||||||| Sbjct: 750 ccaacaactccaaaagtagtctgtgggctaaaaggatcgtcagctgatatgtttctagac 809 Query: 793 aatgcagaataccggaagttccttttcagagaatttgcggtgtcaacaatagatgaggaa 852 ||||||||||| |||||||||||||||||||||||| || |||||| |||||||||| Sbjct: 810 aatgcagaatataggaagttccttttcagagaatttggtgtatcaacagtagatgaggag 869 Query: 853 agcgcagcagtggtgatgacaacaacatctcctggcgtacctgtgattgtgttccgggga 912 || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 870 agtgcagcagtggtgatgacaacaacatctcctggcatacctgtgattgtattccgggga 929 Query: 913 gtatctgatctggctggaggggaaccaacatggtcatcaacaagcctgatgaacctggcg 972 || |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 930 gtttctgatttggctggaggggagccaacatggtcgtcaacaagcctgatgaacctggca 989 Query: 973 tctattaatgcactcaaagtggcagtggagttcattgctaca 1014 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 990 tctattaatgcactcaaagtggcagtggagtttattgctaca 1031
>emb|CT830156.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA048P23, full insert sequence Length = 1439 Score = 876 bits (442), Expect = 0.0 Identities = 772/882 (87%) Strand = Plus / Plus Query: 133 atggacagggtgaggcagcaggtcgacagggcgaacaggcgcggcccgtccatcgggctc 192 |||||||||||| | ||||||||||| || ||| |||| |||| |||||||||||| Sbjct: 223 atggacagggtgcgatggcaggtcgacaaggtcaaccggcggggccattccatcgggctc 282 Query: 193 gtcatgtcgtacgtcgctgaggacaccgcgctccaggcctccggctacttccggccctgg 252 |||||||||||| ||| ||||| ||| || || | |||||||||||||| | || ||| Sbjct: 283 gtcatgtcgtacatcgatgaggccactgctcttgaatcctccggctacttcagaccttgg 342 Query: 253 cgtgtccagcccttcgttgacctctacggacggaggtttcacatcgggagtattcgaggt 312 | ||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||| Sbjct: 343 catgtcctccccttcgttgacctctacggacgaaggtatcacatcgggagtattagaggt 402 Query: 313 gtgaatgttatatacgcattgacagggcaacgcaggttgaatgcagctgtcactgtacaa 372 || ||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 403 gtcaatgttatatatgcactgacaggacaacgcaggttaaatgcggctgtgactgtacag 462 Query: 373 actctcctcgacgtcttcaccgtgtctggtattgtccattatggcacggcaggaagctct 432 |||||| |||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 463 actctcatcgacgtctttactgtgtctggcattgttcattatggcacagcaggaagttct 522 Query: 433 aatgattcaatgtcatttggagatgtcagtgtccccaagttagttgcttatacaggcgcc 492 |||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || Sbjct: 523 aatgattcaatgtcatttggcgatgtcagtgtccccaaatttgttgcttatacaagtgct 582 Query: 493 tggacatggaagaagtacaaatcacttaaagaagcatcaacagaactaagctttggacaa 552 |||||||||||||||| |||||||| ||||| | |||||||| ||||||||| | Sbjct: 583 tggacatggaagaagttcaaatcaccaaaagagtcggatacagaacttagctttggagat 642 Query: 553 tttaatgtcccggatgaaggagagaacctgctagggtctctgaaatacagaaatgaggag 612 |||| |||||| ||| ||||||||| || ||||| ||||||||| ||||||||||||| Sbjct: 643 tttactgtcccaaatggaggagagaatcttctaggagctctgaaattcagaaatgaggag 702 Query: 613 ctatactcagttggtaagcctatggaagaagttttttggttacctgtagattcagcatgg 672 ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 703 ctatactcagtgggtaagcctatgaaagaagttttctggttacctgtagattcagcatgg 762 Query: 673 ttcaagatagcagaaggacttaaggtcacccttgaaaggtgtaatgacactttctgctta 732 ||||| || ||||||||||||||||| | |||||||| ||||| |||||||||||||| Sbjct: 763 ttcaaaatcgcagaaggacttaaggtttcacttgaaagatgtaacgacactttctgcttg 822 Query: 733 ccaaaaaccccacaagtggttcatgggctaaaaggagcatccgccgacatgtttctagac 792 |||| ||| ||| |||| || ||||||||||||| | || || || |||||||||||| Sbjct: 823 ccaacaactccaaaagtagtctgtgggctaaaaggatcgtcagctgatatgtttctagac 882 Query: 793 aatgcagaataccggaagttccttttcagagaatttgcggtgtcaacaatagatgaggaa 852 ||||||||||| |||||||||||||||||||||||| || |||||| |||||||||| Sbjct: 883 aatgcagaatataggaagttccttttcagagaatttggtgtatcaacagtagatgaggag 942 Query: 853 agcgcagcagtggtgatgacaacaacatctcctggcgtacctgtgattgtgttccgggga 912 || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 943 agtgcagcagtggtgatgacaacaacatctcctggcatacctgtgattgtattccgggga 1002 Query: 913 gtatctgatctggctggaggggaaccaacatggtcatcaacaagcctgatgaacctggcg 972 || |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 1003 gtttctgatttggctggaggggagccaacatggtcgtcaacaagcctgatgaacctggca 1062 Query: 973 tctattaatgcactcaaagtggcagtggagttcattgctaca 1014 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1063 tctattaatgcactcaaagtggcagtggagtttattgctaca 1104
>dbj|AK069439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025O05, full insert sequence Length = 1251 Score = 868 bits (438), Expect = 0.0 Identities = 771/882 (87%) Strand = Plus / Plus Query: 133 atggacagggtgaggcagcaggtcgacagggcgaacaggcgcggcccgtccatcgggctc 192 |||||||||||||| ||||||||||| || ||| |||| |||| |||||||||||| Sbjct: 140 atggacagggtgagatggcaggtcgacaaggtcaaccggcggggccattccatcgggctc 199 Query: 193 gtcatgtcgtacgtcgctgaggacaccgcgctccaggcctccggctacttccggccctgg 252 |||||||||||| ||| ||||| ||| || || | ||||||||| |||| | || ||| Sbjct: 200 gtcatgtcgtacatcgatgaggccactgctcttgaatcctccggctgcttcagaccttgg 259 Query: 253 cgtgtccagcccttcgttgacctctacggacggaggtttcacatcgggagtattcgaggt 312 | ||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||| Sbjct: 260 catgtcctccccttcgttgacctctacggacgaaggtatcacatcgggagtattagaggt 319 Query: 313 gtgaatgttatatacgcattgacagggcaacgcaggttgaatgcagctgtcactgtacaa 372 || ||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 320 gtcaatgttatatatgcactgacaggacaacgcaggttaaatgcggctgtgactgtacag 379 Query: 373 actctcctcgacgtcttcaccgtgtctggtattgtccattatggcacggcaggaagctct 432 |||||| |||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 380 actctcatcgacgtctttactgtgtctggcattgttcattatggcacagcaggaagttct 439 Query: 433 aatgattcaatgtcatttggagatgtcagtgtccccaagttagttgcttatacaggcgcc 492 |||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || Sbjct: 440 aatgattcaatgtcatttggcgatgtcagtgtccccaaatttgttgcttatacaagtgct 499 Query: 493 tggacatggaagaagtacaaatcacttaaagaagcatcaacagaactaagctttggacaa 552 |||||||||||||||| ||| |||| ||||| | |||||||| ||||||||| | Sbjct: 500 tggacatggaagaagttcaagtcaccaaaagagtcggatacagaacttagctttggagat 559 Query: 553 tttaatgtcccggatgaaggagagaacctgctagggtctctgaaatacagaaatgaggag 612 |||| |||||| ||| ||||||||| || ||||| ||||||||| ||||||||||||| Sbjct: 560 tttactgtcccaaatggaggagagaatcttctaggagctctgaaattcagaaatgaggag 619 Query: 613 ctatactcagttggtaagcctatggaagaagttttttggttacctgtagattcagcatgg 672 ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 620 ctatactcagtgggtaagcctatgaaagaagttttctggttacctgtagattcagcatgg 679 Query: 673 ttcaagatagcagaaggacttaaggtcacccttgaaaggtgtaatgacactttctgctta 732 ||||| || ||||||||||||||||| | |||||||| ||||| |||||||||||||| Sbjct: 680 ttcaaaatcgcagaaggacttaaggtttcacttgaaagatgtaacgacactttctgcttg 739 Query: 733 ccaaaaaccccacaagtggttcatgggctaaaaggagcatccgccgacatgtttctagac 792 |||| ||| ||| |||| || ||||||||||||| | || || || |||||||||||| Sbjct: 740 ccaacaactccaaaagtagtctgtgggctaaaaggatcgtcagctgatatgtttctagac 799 Query: 793 aatgcagaataccggaagttccttttcagagaatttgcggtgtcaacaatagatgaggaa 852 ||||||||||| |||||||||||||||||||||||| || |||||| |||||||||| Sbjct: 800 aatgcagaatataggaagttccttttcagagaatttggtgtatcaacagtagatgaggag 859 Query: 853 agcgcagcagtggtgatgacaacaacatctcctggcgtacctgtgattgtgttccgggga 912 || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 860 agtgcagcagtggtgatgacaacaacatctcctggcatacctgtgattgtattccgggga 919 Query: 913 gtatctgatctggctggaggggaaccaacatggtcatcaacaagcctgatgaacctggcg 972 || |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 920 gtttctgatttggctggaggggagccaacatggtcgtcaacaagcctgatgaacctggca 979 Query: 973 tctattaatgcactcaaagtggcagtggagttcattgctaca 1014 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 980 tctattaatgcactcaaagtggcagtggagtttattgctaca 1021
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 224 bits (113), Expect = 6e-55 Identities = 137/145 (94%) Strand = Plus / Minus Query: 870 gacaacaacatctcctggcgtacctgtgattgtgttccggggagtatctgatctggctgg 929 ||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||| Sbjct: 678336 gacaacaacatctcctggcatacctgtgattgtattccggggagtttctgatttggctgg 678277 Query: 930 aggggaaccaacatggtcatcaacaagcctgatgaacctggcgtctattaatgcactcaa 989 |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 678276 aggggagccaacatggtcgtcaacaagcctgatgaacctggcatctattaatgcactcaa 678217 Query: 990 agtggcagtggagttcattgctaca 1014 ||||||||||||||| ||||||||| Sbjct: 678216 agtggcagtggagtttattgctaca 678192 Score = 196 bits (99), Expect = 1e-46 Identities = 150/167 (89%) Strand = Plus / Minus Query: 532 acagaactaagctttggacaatttaatgtcccggatgaaggagagaacctgctagggtct 591 |||||||| ||||||||| | |||| |||||| ||| ||||||||| || ||||| || Sbjct: 678885 acagaacttagctttggagattttactgtcccaaatggaggagagaatcttctaggagct 678826 Query: 592 ctgaaatacagaaatgaggagctatactcagttggtaagcctatggaagaagttttttgg 651 ||||||| |||||||||||||||||||||||| |||||||||||| |||||||||| ||| Sbjct: 678825 ctgaaattcagaaatgaggagctatactcagtgggtaagcctatgaaagaagttttctgg 678766 Query: 652 ttacctgtagattcagcatggttcaagatagcagaaggacttaaggt 698 |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 678765 ttacctgtagattcagcatggttcaaaatcgcagaaggacttaaggt 678719 Score = 176 bits (89), Expect = 1e-40 Identities = 137/153 (89%) Strand = Plus / Minus Query: 352 aatgcagctgtcactgtacaaactctcctcgacgtcttcaccgtgtctggtattgtccat 411 ||||| ||||| |||||||| |||||| |||||||||| || |||||||| ||||| ||| Sbjct: 679908 aatgcggctgtgactgtacagactctcatcgacgtctttactgtgtctggcattgttcat 679849 Query: 412 tatggcacggcaggaagctctaatgattcaatgtcatttggagatgtcagtgtccccaag 471 |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 679848 tatggcacagcaggaagttctaatgattcaatgtcatttggcgatgtcagtgtccccaaa 679789 Query: 472 ttagttgcttatacaggcgcctggacatggaag 504 || |||||||||||| | || |||||||||||| Sbjct: 679788 tttgttgcttatacaagtgcttggacatggaag 679756 Score = 151 bits (76), Expect = 7e-33 Identities = 145/168 (86%) Strand = Plus / Minus Query: 703 cttgaaaggtgtaatgacactttctgcttaccaaaaaccccacaagtggttcatgggcta 762 |||||||| ||||| |||||||||||||| |||| ||| ||| |||| || ||||||| Sbjct: 678633 cttgaaagatgtaacgacactttctgcttgccaacaactccaaaagtagtctgtgggcta 678574 Query: 763 aaaggagcatccgccgacatgtttctagacaatgcagaataccggaagttccttttcaga 822 |||||| | || || || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 678573 aaaggatcgtcagctgatatgtttctagacaatgcagaatataggaagttccttttcaga 678514 Query: 823 gaatttgcggtgtcaacaatagatgaggaaagcgcagcagtggtgatg 870 ||||||| || |||||| |||||||||| || ||||||||||||||| Sbjct: 678513 gaatttggtgtatcaacagtagatgaggagagtgcagcagtggtgatg 678466 Score = 97.6 bits (49), Expect = 9e-17 Identities = 124/149 (83%) Strand = Plus / Minus Query: 133 atggacagggtgaggcagcaggtcgacagggcgaacaggcgcggcccgtccatcgggctc 192 |||||||||||||| ||||||||||| || ||| |||| |||| |||||||||||| Sbjct: 681025 atggacagggtgagatggcaggtcgacaaggtcaaccggcggggccattccatcgggctc 680966 Query: 193 gtcatgtcgtacgtcgctgaggacaccgcgctccaggcctccggctacttccggccctgg 252 |||||||||||| ||| ||||| ||| || || | |||||||||||||| | || ||| Sbjct: 680965 gtcatgtcgtacatcgatgaggccactgctcttgaatcctccggctacttcagaccttgg 680906 Query: 253 cgtgtccagcccttcgttgacctctacgg 281 | ||||| |||||||||||||||||||| Sbjct: 680905 catgtcctccccttcgttgacctctacgg 680877 Score = 81.8 bits (41), Expect = 6e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 280 ggacggaggtttcacatcgggagtattcgaggtgtgaatgttatatacgcattgacaggg 339 ||||| |||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||| Sbjct: 680159 ggacgaaggtatcacatcgggagtattagaggtgtcaatgttatatatgcactgacagga 680100 Query: 340 caacgcagg 348 ||||||||| Sbjct: 680099 caacgcagg 680091
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 224 bits (113), Expect = 6e-55 Identities = 137/145 (94%) Strand = Plus / Minus Query: 870 gacaacaacatctcctggcgtacctgtgattgtgttccggggagtatctgatctggctgg 929 ||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||| Sbjct: 84764 gacaacaacatctcctggcatacctgtgattgtattccggggagtttctgatttggctgg 84705 Query: 930 aggggaaccaacatggtcatcaacaagcctgatgaacctggcgtctattaatgcactcaa 989 |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 84704 aggggagccaacatggtcgtcaacaagcctgatgaacctggcatctattaatgcactcaa 84645 Query: 990 agtggcagtggagttcattgctaca 1014 ||||||||||||||| ||||||||| Sbjct: 84644 agtggcagtggagtttattgctaca 84620 Score = 196 bits (99), Expect = 1e-46 Identities = 150/167 (89%) Strand = Plus / Minus Query: 532 acagaactaagctttggacaatttaatgtcccggatgaaggagagaacctgctagggtct 591 |||||||| ||||||||| | |||| |||||| ||| ||||||||| || ||||| || Sbjct: 85313 acagaacttagctttggagattttactgtcccaaatggaggagagaatcttctaggagct 85254 Query: 592 ctgaaatacagaaatgaggagctatactcagttggtaagcctatggaagaagttttttgg 651 ||||||| |||||||||||||||||||||||| |||||||||||| |||||||||| ||| Sbjct: 85253 ctgaaattcagaaatgaggagctatactcagtgggtaagcctatgaaagaagttttctgg 85194 Query: 652 ttacctgtagattcagcatggttcaagatagcagaaggacttaaggt 698 |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 85193 ttacctgtagattcagcatggttcaaaatcgcagaaggacttaaggt 85147 Score = 176 bits (89), Expect = 1e-40 Identities = 137/153 (89%) Strand = Plus / Minus Query: 352 aatgcagctgtcactgtacaaactctcctcgacgtcttcaccgtgtctggtattgtccat 411 ||||| ||||| |||||||| |||||| |||||||||| || |||||||| ||||| ||| Sbjct: 86336 aatgcggctgtgactgtacagactctcatcgacgtctttactgtgtctggcattgttcat 86277 Query: 412 tatggcacggcaggaagctctaatgattcaatgtcatttggagatgtcagtgtccccaag 471 |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 86276 tatggcacagcaggaagttctaatgattcaatgtcatttggcgatgtcagtgtccccaaa 86217 Query: 472 ttagttgcttatacaggcgcctggacatggaag 504 || |||||||||||| | || |||||||||||| Sbjct: 86216 tttgttgcttatacaagtgcttggacatggaag 86184 Score = 151 bits (76), Expect = 7e-33 Identities = 145/168 (86%) Strand = Plus / Minus Query: 703 cttgaaaggtgtaatgacactttctgcttaccaaaaaccccacaagtggttcatgggcta 762 |||||||| ||||| |||||||||||||| |||| ||| ||| |||| || ||||||| Sbjct: 85061 cttgaaagatgtaacgacactttctgcttgccaacaactccaaaagtagtctgtgggcta 85002 Query: 763 aaaggagcatccgccgacatgtttctagacaatgcagaataccggaagttccttttcaga 822 |||||| | || || || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 85001 aaaggatcgtcagctgatatgtttctagacaatgcagaatataggaagttccttttcaga 84942 Query: 823 gaatttgcggtgtcaacaatagatgaggaaagcgcagcagtggtgatg 870 ||||||| || |||||| |||||||||| || ||||||||||||||| Sbjct: 84941 gaatttggtgtatcaacagtagatgaggagagtgcagcagtggtgatg 84894 Score = 97.6 bits (49), Expect = 9e-17 Identities = 124/149 (83%) Strand = Plus / Minus Query: 133 atggacagggtgaggcagcaggtcgacagggcgaacaggcgcggcccgtccatcgggctc 192 |||||||||||||| ||||||||||| || ||| |||| |||| |||||||||||| Sbjct: 87453 atggacagggtgagatggcaggtcgacaaggtcaaccggcggggccattccatcgggctc 87394 Query: 193 gtcatgtcgtacgtcgctgaggacaccgcgctccaggcctccggctacttccggccctgg 252 |||||||||||| ||| ||||| ||| || || | |||||||||||||| | || ||| Sbjct: 87393 gtcatgtcgtacatcgatgaggccactgctcttgaatcctccggctacttcagaccttgg 87334 Query: 253 cgtgtccagcccttcgttgacctctacgg 281 | ||||| |||||||||||||||||||| Sbjct: 87333 catgtcctccccttcgttgacctctacgg 87305 Score = 81.8 bits (41), Expect = 6e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 280 ggacggaggtttcacatcgggagtattcgaggtgtgaatgttatatacgcattgacaggg 339 ||||| |||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||| Sbjct: 86587 ggacgaaggtatcacatcgggagtattagaggtgtcaatgttatatatgcactgacagga 86528 Query: 340 caacgcagg 348 ||||||||| Sbjct: 86527 caacgcagg 86519
>gb|AC191655.2| Taeniopygia guttata BAC clone TGMCBa-26H12 from chromosome unknown, complete sequence Length = 127151 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 cagcgctgcctgggatggacagggtg 144 |||||||||| ||||||||||||||| Sbjct: 2583 cagcgctgccagggatggacagggtg 2558 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 cagcgctgcctgggatggacagggtg 144 |||||||||| ||||||||||||||| Sbjct: 24613 cagcgctgccagggatggacagggtg 24588 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 cagcgctgcctgggatggacagggtg 144 |||||||||| ||||||||||||||| Sbjct: 44590 cagcgctgccagggatggacagggtg 44615 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 cagcgctgcctgggatggacagggtg 144 |||||||||| ||||||||||||||| Sbjct: 81790 cagcgctgccagggatggacagggtg 81815
>ref|XM_001162866.1| PREDICTED: Pan troglodytes PR domain containing 4, transcript variant 2 (PRDM4), mRNA Length = 4217 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2609 acaaatcacttaaagaagcatc 2630
>ref|XM_001162965.1| PREDICTED: Pan troglodytes PR domain containing 4, transcript variant 5 (PRDM4), mRNA Length = 4196 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2588 acaaatcacttaaagaagcatc 2609
>ref|XM_001162934.1| PREDICTED: Pan troglodytes PR domain containing 4, transcript variant 4 (PRDM4), mRNA Length = 4165 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2557 acaaatcacttaaagaagcatc 2578
>ref|XM_001162898.1| PREDICTED: Pan troglodytes PR domain containing 4, transcript variant 3 (PRDM4), mRNA Length = 4117 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2509 acaaatcacttaaagaagcatc 2530
>ref|XM_509342.2| PREDICTED: Pan troglodytes PR domain containing 4, transcript variant 6 (PRDM4), mRNA Length = 3852 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2244 acaaatcacttaaagaagcatc 2265
>gb|DQ894422.1| Homo sapiens clone FLH170419.01L; RZPDo839F0397D PRDM4 mRNA, partial sequence Length = 2406 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2140 acaaatcacttaaagaagcatc 2161
>gb|DQ891237.1| Synthetic construct Homo sapiens clone FLH170423.01X; RZPDo839F0398D PRDM4 mRNA, complete sequence Length = 2406 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2140 acaaatcacttaaagaagcatc 2161
>ref|XM_001101288.1| PREDICTED: Macaca mulatta PR domain containing 4, transcript variant 2 (PRDM4), mRNA Length = 4196 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2581 acaaatcacttaaagaagcatc 2602
>ref|XM_001101382.1| PREDICTED: Macaca mulatta PR domain containing 4, transcript variant 3 (PRDM4), mRNA Length = 4175 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2560 acaaatcacttaaagaagcatc 2581
>ref|NM_012406.3| Homo sapiens PR domain containing 4 (PRDM4), mRNA Length = 4225 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2577 acaaatcacttaaagaagcatc 2598
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 84 ctgcttgctggcgggatcgtcgacgacggc 113 ||||||| ||| |||||||||||||||||| Sbjct: 2718449 ctgcttgatggtgggatcgtcgacgacggc 2718420
>dbj|AK056378.1| Homo sapiens cDNA FLJ31816 fis, clone NT2RP6000005, highly similar to Homo sapiens PR-domain zinc-finger protein PFM1 mRNA Length = 2727 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2444 acaaatcacttaaagaagcatc 2465
>gb|BC068562.1| Homo sapiens PR domain containing 4, mRNA (cDNA clone IMAGE:5265828), complete cds Length = 2575 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2277 acaaatcacttaaagaagcatc 2298
>gb|BC035581.1| Homo sapiens PR domain containing 4, mRNA (cDNA clone MGC:45046 IMAGE:5587364), complete cds Length = 3999 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2378 acaaatcacttaaagaagcatc 2399
>gb|AC007622.28| Homo sapiens 12 BAC RP11-864J10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121700 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 57808 acaaatcacttaaagaagcatc 57829
>emb|AL445495.5| Human DNA sequence from clone RP11-349P17 on chromosome 9 Contains part of the GPR51 gene for G protein-coupled receptor 51 (HG20, GABBR2, GPRC3B, GABABR2) and a CpG island, complete sequence Length = 155837 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1099 gtagaatagtttaaacagcaattgga 1124 |||||||||||||||||| ||||||| Sbjct: 88639 gtagaatagtttaaacaggaattgga 88664
>emb|AL356316.18| Human DNA sequence from clone RP11-172I24 on chromosome 13 Contains part of the ATP8A2 gene for ATPase, aminophospholipid transporter-like, Class I, type 8A, member 2 (ML-1 protein)(IB, ATP, ML-1, ATPIB, DKFZP434B1913) and a CpG island, complete sequence Length = 74102 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1222 atatgtcaatccatttttaaaa 1243 |||||||||||||||||||||| Sbjct: 15217 atatgtcaatccatttttaaaa 15196
>emb|AL133083.1|HSM801359 Homo sapiens mRNA; cDNA DKFZp434H0127 (from clone DKFZp434H0127); partial cds Length = 3546 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 1912 acaaatcacttaaagaagcatc 1933
>emb|CR860836.1| Pongo pygmaeus mRNA; cDNA DKFZp469I1314 (from clone DKFZp469I1314) Length = 4148 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2515 acaaatcacttaaagaagcatc 2536
>gb|AF144757.2|AF144757 Homo sapiens PR-domain zinc-finger protein PFM1 mRNA, complete cds Length = 3901 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 acaaatcacttaaagaagcatc 530 |||||||||||||||||||||| Sbjct: 2262 acaaatcacttaaagaagcatc 2283
>emb|BX005039.11| Mouse DNA sequence from clone RP23-391M18 on chromosome 2, complete sequence Length = 145263 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 911 gagtatctgatctggctggagg 932 |||||||||||||||||||||| Sbjct: 30762 gagtatctgatctggctggagg 30741
>gb|AC123822.4| Mus musculus BAC clone RP23-477F12 from chromosome 7, complete sequence Length = 179943 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1075 ctgccatgtccatggagcaga 1095 ||||||||||||||||||||| Sbjct: 67352 ctgccatgtccatggagcaga 67372
>emb|AL136324.6| Human DNA sequence from clone RP5-944H6 on chromosome 1p22.3-31.2 Contains the 3' end of the PTGFR gene for prostaglandin, complete sequence Length = 135758 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1224 atgtcaatccatttttaaaag 1244 ||||||||||||||||||||| Sbjct: 67868 atgtcaatccatttttaaaag 67888
>emb|BX294017.1|NCB7O17 Neurospora crassa DNA linkage group V BAC clone B7O17 Length = 26447 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 ctgctgttctgcttgctggcgggat 100 |||||||||| |||||||||||||| Sbjct: 5072 ctgctgttcttcttgctggcgggat 5096
>emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cosmid contig 15E11 Length = 79133 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 ctgctgttctgcttgctggcgggat 100 |||||||||| |||||||||||||| Sbjct: 7571 ctgctgttcttcttgctggcgggat 7547
>gb|AC098872.5| Homo sapiens BAC clone RP11-773P9 from 2, complete sequence Length = 178804 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 aagaagtacaaatcacttaaa 522 ||||||||||||||||||||| Sbjct: 88194 aagaagtacaaatcacttaaa 88214
>gb|AF083221.1|AF083221 Fugu rubripes putative neurotransmitter receptors, YDR140w homolog, and glycinamide ribonucleotide transformylase (GART) genes, complete cds Length = 43373 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1046 aaagttcaaaaaactgagaca 1066 ||||||||||||||||||||| Sbjct: 11615 aaagttcaaaaaactgagaca 11595
>emb|BX539309.5| Mouse DNA sequence from clone RP23-475N16 on chromosome 7, complete sequence Length = 82140 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1075 ctgccatgtccatggagcaga 1095 ||||||||||||||||||||| Sbjct: 34077 ctgccatgtccatggagcaga 34057
>emb|X73031.1|BCRISAA B.campestris ribosomal intergenic spacer Length = 3758 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 896 tgattgtgttccggggagtat 916 ||||||||||||||||||||| Sbjct: 2889 tgattgtgttccggggagtat 2869 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 227,272,193 Number of extensions: 12074790 Number of successful extensions: 248751 Number of sequences better than 10.0: 39 Number of HSP's gapped: 248742 Number of HSP's successfully gapped: 59 Length of query: 1259 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1236 Effective length of database: 18,503,978,556 Effective search space: 22870917495216 Effective search space used: 22870917495216 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)