ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf80l16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os02g0275100:Os02g0275100 238 6e-63
2AK111043:Os05g0532800 31 1.9
3Os11g0222200:Os11g0222200 31 2.0
4AK069370:Os02g0757700 30 2.5
5Os01g0935400:Os01g0935400 30 2.6
6Os03g0728200:Os03g0728200 30 3.3
7AK111012:Os10g0128100 26 8.1
8Os06g0659100:Os06g0659100 28 9.7
9AK122102:Os08g0487800 28 9.7
10AK109684:Os08g0491400 28 9.7
11AK102156:Os03g0295600 28 9.7
12AK072429:Os03g0295600 28 9.7
13AK068281:Os02g0518000 28 9.7

>Os02g0275100:Os02g0275100 |
          Length = 152
 Score =  238 bits (607), Expect = 6e-63
 Identities = 115/139 (82%), Positives = 126/139 (90%)
 Frame = +1

Query: 313 MASEEDVKQRQVVEDRARNISHNVRCTECGSQSIEDSQADVAVLLRRLIRDEIKSGKSDK 492
           MA+EEDVKQRQ++E RARNISHNVRCTECGSQSIEDSQAD+A+LLR+LIRDEIKSGKSDK
Sbjct: 1   MATEEDVKQRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSDK 60

Query: 493 EIYKKLEEDFGETVLYAPKFDLQTAAIWLSPVIXXXXXXXXXXYQKHRQRTNVHIMALNL 672
           EIYKKL+ D+GET+LY PKFDLQTAAIWLSPVI          YQKHRQRTNVHIMALNL
Sbjct: 61  EIYKKLQADYGETILYTPKFDLQTAAIWLSPVIVGGVAAGVWAYQKHRQRTNVHIMALNL 120

Query: 673 VRGVPLTPREKETMIDILT 729
           VRGVPLTPREKETM+D+LT
Sbjct: 121 VRGVPLTPREKETMLDVLT 139



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>AK111043:Os05g0532800 |
          Length = 85

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 606 SWRVG----LPKAQ-AKDQRSHHGSEPRPRGSPDSKGEGDD 713
           S+RVG    L +AQ A D  +HHGS       PD  GE DD
Sbjct: 32  SFRVGFKPYLDRAQEAMDDTTHHGSASGAAAQPDHAGEEDD 72



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>Os11g0222200:Os11g0222200 |
          Length = 1043

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
 Frame = +1

Query: 127 LASDPSPARAAPVEADALPQVLLRP------APRRRICPAEIWPCAGQLLPQAPPRHSKV 288
           L+S P+P   AP EA   P +  RP      A +R  C     P AG++L  A   ++ V
Sbjct: 630 LSSAPAPKPEAPAEAMPPPPMPTRPWGEALAAAQRAFC----LPLAGRVLAAAGTGNAAV 685

Query: 289 HTDNITLTMA----SEEDVKQRQVVEDRARNISHNVRCTECGSQSIEDSQADVAVLLRRL 456
               + +++A          +RQV++         + C   G     D+    + +++R+
Sbjct: 686 SAPAVHVSLALAAGGARGATRRQVLQ--------ALGCGGGGRGGAADAANVASRVVKRV 737

Query: 457 IRDEIKSG 480
           +RD   SG
Sbjct: 738 LRDRSTSG 745



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>AK069370:Os02g0757700 |
          Length = 272

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +3

Query: 612 RVGLPKAQAKDQRSHHGSEPRPRGSPDSKGEGDDDRHPHAAP 737
           R G+P  +    R HH   P P        +G   RHP A P
Sbjct: 98  RQGVPARRGARHRLHHAEAPAPGDGLHGDRDGCGARHPRAVP 139



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>Os01g0935400:Os01g0935400 |
          Length = 366

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -2

Query: 735 GRREDVDHRLLLPWSQGNPSDEV---QSHDVNVGPLPVLLVSPHASCYATHNH 586
           GR + V+HR +        S       ++DV +GPLP L+       Y T+NH
Sbjct: 291 GRYKSVEHRAVASGEHDRMSVVTFYAPAYDVELGPLPELVADGEPRRYRTYNH 343



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>Os03g0728200:Os03g0728200 |
          Length = 601

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 21/50 (42%), Positives = 26/50 (52%)
 Frame = +1

Query: 130 ASDPSPARAAPVEADALPQVLLRPAPRRRICPAEIWPCAGQLLPQAPPRH 279
           +S PSP+  AP+ A  L   LL P   RR+ P  + P A  LL  A P H
Sbjct: 111 SSAPSPSLLAPLPAQLLSPSLLSPV-LRRLPPPRLLPFALSLL-SARPNH 158



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>AK111012:Os10g0128100 |
          Length = 148

 Score = 25.8 bits (55), Expect(2) = 8.1
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
 Frame = -3

Query: 278 WRGGAWGRSWP---AQGQISAGQMRRRGAGRSRTW 183
           WR G     W    A G+   G   RRG G +RTW
Sbjct: 8   WRRGLRFIHWAWMGAMGRTCLGDEGRRGDGDARTW 42



 Score = 21.6 bits (44), Expect(2) = 8.1
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 189 DLGEGVGLDRCSAR 148
           D G GVG  RC AR
Sbjct: 77  DAGAGVGPARCDAR 90



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>Os06g0659100:Os06g0659100 |
          Length = 426

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 737 HRQGGGGGLSNDVLSC 784
           H  GGGGG SN++LSC
Sbjct: 368 HINGGGGGGSNNILSC 383



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>AK122102:Os08g0487800 |
          Length = 785

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = +1

Query: 403 SQSIEDSQADVAVLLRRLIRD-----EIKSGKSDKEIYKKLEEDFGETV 534
           S+ I      V ++ +RL+R      E  S K DKE YKK  E FG+ +
Sbjct: 441 SREILQESRIVRIMRKRLVRKTFDMIEEISEKDDKEDYKKFWESFGKFI 489



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>AK109684:Os08g0491400 |
          Length = 436

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
 Frame = +1

Query: 115 CCYSLASDPSPARAA-PVEADALPQVLLRPAPRRRICPAEIW------PCAGQLLPQAPP 273
           CC S+    +   A   + A AL  V L P  +RRI PAE +      P + +++ +  P
Sbjct: 95  CCASIKKGAAAKEARLALRAVALLAVTLGPGSKRRILPAETYNPLEPGPGSKKIMAETFP 154

Query: 274 RHSKV--HTDNITLTMASEEDVKQRQVVEDRARNISHNVRC 390
             S++   + +  L +A+ E +     V+  A N+     C
Sbjct: 155 LVSRILEVSTDAPLVIAALESLAVVAFVDVAAENMDDTEAC 195



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>AK102156:Os03g0295600 |
          Length = 670

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 1129 NSLPLC*TANTAITSDTTCLSVQKKKARLGRSYISTAGCFST 1004
            +SLP C  A  A    TT  +  KK  RLGR++      F +
Sbjct: 110  DSLPTCADAAFAAGEPTTAQAAPKKWQRLGRNFAGAIAAFKS 151



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>AK072429:Os03g0295600 |
          Length = 670

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 1129 NSLPLC*TANTAITSDTTCLSVQKKKARLGRSYISTAGCFST 1004
            +SLP C  A  A    TT  +  KK  RLGR++      F +
Sbjct: 110  DSLPTCADAAFAAGEPTTAQAAPKKWQRLGRNFAGAIAAFKS 151



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>AK068281:Os02g0518000 |
          Length = 343

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = +1

Query: 142 SPARAAPVEADALPQVLLRPAPRRRICPAEIWPCAGQLLPQAPPRHSKVHTDNI 303
           +P R+A   A  LP     P P   + PA  WP   QL+P      +K HT  I
Sbjct: 200 TPPRSAASRAITLPP----PPPSSTMYPAIDWPPTEQLIPMLLYPPAKPHTTAI 249


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 28,403,449
Number of extensions: 602270
Number of successful extensions: 2084
Number of sequences better than 10.0: 13
Number of HSP's gapped: 2084
Number of HSP's successfully gapped: 14
Length of query: 395
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 292
Effective length of database: 11,275,632
Effective search space: 3292484544
Effective search space used: 3292484544
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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