| Clone Name | FLbaf80l16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK242385.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080047F12, full insert sequence Length = 1187 Score = 490 bits (247), Expect = e-135 Identities = 361/399 (90%) Strand = Plus / Plus Query: 312 catggctagtgaagaggatgtgaagcagcggcaggttgttgaagaccgtgcaagaaatat 371 |||||| | |||||||||||||||||| || || || ||||| ||||||||||||||| Sbjct: 376 catggccactgaagaggatgtgaagcaacgacaaattattgaaagccgtgcaagaaatat 435 Query: 372 tagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattcacaagcaga 431 |||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||| || Sbjct: 436 tagccacaatgtccgatgcaccgagtgcggcagccagtccattgaagattcacaagctga 495 Query: 432 tgttgcagttctccttagaaggctaattcgtgatgaaataaaatctggaaagagtgataa 491 ||||| |||| ||||| | |||||||||||||||||| |||||||||||||||||||| Sbjct: 496 cattgcaattctgcttaggaagctaattcgtgatgaaatcaaatctggaaagagtgataa 555 Query: 492 ggagatatacaaaaaactagaagaagactttggagaaacagttctatatgcccctaaatt 551 ||||||||||||||||||| ||| |||| |||||||||| |||||||| |||||||||| Sbjct: 556 ggagatatacaaaaaactacaagctgactatggagaaacaattctatatacccctaaatt 615 Query: 552 tgatcttcaaactgctgccatatggttatcgccggtgattgtgggtggcgtagcagctgg 611 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 616 tgatcttcaaactgctgccatatggttatcaccggtgatcgtgggtggcgtagcagctgg 675 Query: 612 cgtgtgggcttaccaaaagcacaggcaaaggaccaacgttcacatcatggctctgaacct 671 || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 676 tgtctgggcttaccaaaagcacaggcagaggactaacgttcacatcatggctctgaatct 735 Query: 672 cgtccgaggggttcccctgactccaagggagaaggagac 710 ||||| |||||||| ||||| ||||||||||||||||| Sbjct: 736 tgtccggggggttccactgacaccaagggagaaggagac 774
>emb|CT835432.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA040E08, full insert sequence Length = 808 Score = 488 bits (246), Expect = e-134 Identities = 354/390 (90%) Strand = Plus / Plus Query: 321 tgaagaggatgtgaagcagcggcaggttgttgaagaccgtgcaagaaatattagccacaa 380 |||||||||||||||||| || || || ||||| |||||||||||||||||||||||| Sbjct: 6 tgaagaggatgtgaagcaacgacaaattattgaaagccgtgcaagaaatattagccacaa 65 Query: 381 tgtacggtgcactgagtgtggcagccagtccattgaagattcacaagcagatgttgcagt 440 ||| || ||||| ||||| ||||||||||||||||||||||||||||| || ||||| | Sbjct: 66 tgtccgatgcaccgagtgcggcagccagtccattgaagattcacaagctgacattgcaat 125 Query: 441 tctccttagaaggctaattcgtgatgaaataaaatctggaaagagtgataaggagatata 500 ||| ||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 126 tctgcttaggaagctaattcgtgatgaaatcaaatctggaaagagtgataaggagatata 185 Query: 501 caaaaaactagaagaagactttggagaaacagttctatatgcccctaaatttgatcttca 560 |||||||||| ||| |||| |||||||||| |||| ||| ||||||||||||||||||| Sbjct: 186 caaaaaactacaagctgactatggagaaacaattctgtatacccctaaatttgatcttca 245 Query: 561 aactgctgccatatggttatcgccggtgattgtgggtggcgtagcagctggcgtgtgggc 620 ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 246 aactgctgccatatggttatcaccggtgattgtgggtggcgtagcagctggtgtctgggc 305 Query: 621 ttaccaaaagcacaggcaaaggaccaacgttcacatcatggctctgaacctcgtccgagg 680 |||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 306 ttaccaaaagcacaggcagaggactaacgttcacatcatggctctgaatcttgtccgggg 365 Query: 681 ggttcccctgactccaagggagaaggagac 710 |||||| ||||| ||||||||||||||||| Sbjct: 366 ggttccactgacaccaagggagaaggagac 395
>ref|NM_001053074.1| Oryza sativa (japonica cultivar-group) Os02g0275100 (Os02g0275100) mRNA, complete cds Length = 459 Score = 488 bits (246), Expect = e-134 Identities = 354/390 (90%) Strand = Plus / Plus Query: 321 tgaagaggatgtgaagcagcggcaggttgttgaagaccgtgcaagaaatattagccacaa 380 |||||||||||||||||| || || || ||||| |||||||||||||||||||||||| Sbjct: 9 tgaagaggatgtgaagcaacgacaaattattgaaagccgtgcaagaaatattagccacaa 68 Query: 381 tgtacggtgcactgagtgtggcagccagtccattgaagattcacaagcagatgttgcagt 440 ||| || ||||| ||||| ||||||||||||||||||||||||||||| || ||||| | Sbjct: 69 tgtccgatgcaccgagtgcggcagccagtccattgaagattcacaagctgacattgcaat 128 Query: 441 tctccttagaaggctaattcgtgatgaaataaaatctggaaagagtgataaggagatata 500 ||| ||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 129 tctgcttaggaagctaattcgtgatgaaatcaaatctggaaagagtgataaggagatata 188 Query: 501 caaaaaactagaagaagactttggagaaacagttctatatgcccctaaatttgatcttca 560 |||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||||||| Sbjct: 189 caaaaaactacaagctgactatggagaaacaattctatatacccctaaatttgatcttca 248 Query: 561 aactgctgccatatggttatcgccggtgattgtgggtggcgtagcagctggcgtgtgggc 620 ||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||||| Sbjct: 249 aactgctgccatatggttatcaccggtgatcgtgggtggcgtagcagctggtgtctgggc 308 Query: 621 ttaccaaaagcacaggcaaaggaccaacgttcacatcatggctctgaacctcgtccgagg 680 |||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 309 ttaccaaaagcacaggcagaggactaacgttcacatcatggctctgaatcttgtccgggg 368 Query: 681 ggttcccctgactccaagggagaaggagac 710 |||||| ||||| ||||||||||||||||| Sbjct: 369 ggttccactgacaccaagggagaaggagac 398
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 204 bits (103), Expect = 5e-49 Identities = 127/135 (94%) Strand = Plus / Plus Query: 453 gctaattcgtgatgaaataaaatctggaaagagtgataaggagatatacaaaaaactaga 512 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 10085708 gctaattcgtgatgaaatcaaatctggaaagagtgataaggagatatacaaaaaactaca 10085767 Query: 513 agaagactttggagaaacagttctatatgcccctaaatttgatcttcaaactgctgccat 572 || |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 10085768 agctgactatggagaaacaattctatatacccctaaatttgatcttcaaactgctgccat 10085827 Query: 573 atggttatcgccggt 587 ||||||||| ||||| Sbjct: 10085828 atggttatcaccggt 10085842 Score = 170 bits (86), Expect = 7e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 585 ggtgattgtgggtggcgtagcagctggcgtgtgggcttaccaaaagcacaggcaaaggac 644 |||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 10086454 ggtgatcgtgggtggcgtagcagctggtgtctgggcttaccaaaagcacaggcagaggac 10086513 Query: 645 caacgttcacatcatggctctgaacctcgtccgaggggttcccctgactccaagggagaa 704 ||||||||||||||||||||||| || ||||| |||||||| ||||| ||||||||||| Sbjct: 10086514 taacgttcacatcatggctctgaatcttgtccggggggttccactgacaccaagggagaa 10086573 Query: 705 ggagac 710 |||||| Sbjct: 10086574 ggagac 10086579 Score = 131 bits (66), Expect = 6e-27 Identities = 120/138 (86%) Strand = Plus / Plus Query: 312 catggctagtgaagaggatgtgaagcagcggcaggttgttgaagaccgtgcaagaaatat 371 |||||| | |||||||||||||||||| || || || ||||| ||||||||||||||| Sbjct: 10085409 catggccactgaagaggatgtgaagcaacgacaaattattgaaagccgtgcaagaaatat 10085468 Query: 372 tagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattcacaagcaga 431 |||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||| || Sbjct: 10085469 tagccacaatgtccgatgcaccgagtgcggcagccagtccattgaagattcacaagctga 10085528 Query: 432 tgttgcagttctccttag 449 ||||| |||| ||||| Sbjct: 10085529 cattgcaattctgcttag 10085546
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 204 bits (103), Expect = 5e-49 Identities = 127/135 (94%) Strand = Plus / Plus Query: 453 gctaattcgtgatgaaataaaatctggaaagagtgataaggagatatacaaaaaactaga 512 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 160401 gctaattcgtgatgaaatcaaatctggaaagagtgataaggagatatacaaaaaactaca 160460 Query: 513 agaagactttggagaaacagttctatatgcccctaaatttgatcttcaaactgctgccat 572 || |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 160461 agctgactatggagaaacaattctatatacccctaaatttgatcttcaaactgctgccat 160520 Query: 573 atggttatcgccggt 587 ||||||||| ||||| Sbjct: 160521 atggttatcaccggt 160535 Score = 170 bits (86), Expect = 7e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 585 ggtgattgtgggtggcgtagcagctggcgtgtgggcttaccaaaagcacaggcaaaggac 644 |||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 161147 ggtgatcgtgggtggcgtagcagctggtgtctgggcttaccaaaagcacaggcagaggac 161206 Query: 645 caacgttcacatcatggctctgaacctcgtccgaggggttcccctgactccaagggagaa 704 ||||||||||||||||||||||| || ||||| |||||||| ||||| ||||||||||| Sbjct: 161207 taacgttcacatcatggctctgaatcttgtccggggggttccactgacaccaagggagaa 161266 Query: 705 ggagac 710 |||||| Sbjct: 161267 ggagac 161272 Score = 131 bits (66), Expect = 6e-27 Identities = 120/138 (86%) Strand = Plus / Plus Query: 312 catggctagtgaagaggatgtgaagcagcggcaggttgttgaagaccgtgcaagaaatat 371 |||||| | |||||||||||||||||| || || || ||||| ||||||||||||||| Sbjct: 160102 catggccactgaagaggatgtgaagcaacgacaaattattgaaagccgtgcaagaaatat 160161 Query: 372 tagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattcacaagcaga 431 |||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||| || Sbjct: 160162 tagccacaatgtccgatgcaccgagtgcggcagccagtccattgaagattcacaagctga 160221 Query: 432 tgttgcagttctccttag 449 ||||| |||| ||||| Sbjct: 160222 cattgcaattctgcttag 160239
>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017G06 Length = 150628 Score = 204 bits (103), Expect = 5e-49 Identities = 127/135 (94%) Strand = Plus / Plus Query: 453 gctaattcgtgatgaaataaaatctggaaagagtgataaggagatatacaaaaaactaga 512 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 33402 gctaattcgtgatgaaatcaaatctggaaagagtgataaggagatatacaaaaaactaca 33461 Query: 513 agaagactttggagaaacagttctatatgcccctaaatttgatcttcaaactgctgccat 572 || |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 33462 agctgactatggagaaacaattctatatacccctaaatttgatcttcaaactgctgccat 33521 Query: 573 atggttatcgccggt 587 ||||||||| ||||| Sbjct: 33522 atggttatcaccggt 33536 Score = 170 bits (86), Expect = 7e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 585 ggtgattgtgggtggcgtagcagctggcgtgtgggcttaccaaaagcacaggcaaaggac 644 |||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 34148 ggtgatcgtgggtggcgtagcagctggtgtctgggcttaccaaaagcacaggcagaggac 34207 Query: 645 caacgttcacatcatggctctgaacctcgtccgaggggttcccctgactccaagggagaa 704 ||||||||||||||||||||||| || ||||| |||||||| ||||| ||||||||||| Sbjct: 34208 taacgttcacatcatggctctgaatcttgtccggggggttccactgacaccaagggagaa 34267 Query: 705 ggagac 710 |||||| Sbjct: 34268 ggagac 34273 Score = 131 bits (66), Expect = 6e-27 Identities = 120/138 (86%) Strand = Plus / Plus Query: 312 catggctagtgaagaggatgtgaagcagcggcaggttgttgaagaccgtgcaagaaatat 371 |||||| | |||||||||||||||||| || || || ||||| ||||||||||||||| Sbjct: 33103 catggccactgaagaggatgtgaagcaacgacaaattattgaaagccgtgcaagaaatat 33162 Query: 372 tagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattcacaagcaga 431 |||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||| || Sbjct: 33163 tagccacaatgtccgatgcaccgagtgcggcagccagtccattgaagattcacaagctga 33222 Query: 432 tgttgcagttctccttag 449 ||||| |||| ||||| Sbjct: 33223 cattgcaattctgcttag 33240
>gb|AY110507.1| Zea mays CL61186_-1 mRNA sequence Length = 517 Score = 188 bits (95), Expect = 3e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 499 tacaaaaaactagaagaagactttggagaaacagttctatatgcccctaaatttgatctt 558 ||||| |||||||| || || | ||| || ||||| |||||||||||||||||||||||| Sbjct: 2 tacaagaaactagaggatgattatggggagacagtactatatgcccctaaatttgatctt 61 Query: 559 caaactgctgccatatggttatcgccggtgattgtgggtggcgtagcagctggcgtgtgg 618 || ||||||| || ||| | ||||| || ||||| ||||| |||||||||| | ||| Sbjct: 62 cagactgctgggatttggctttcgcctgtcattgttggtggtatagcagctggaatctgg 121 Query: 619 gcttaccaaaagcacaggcaaaggaccaacgttcacatcatggctctgaacctcgtccga 678 |||||||||| ||| ||||||||||| || |||||||| |||||||||||||| |||||| Sbjct: 122 gcttaccaaaggcataggcaaaggacaaatgttcacattatggctctgaacctggtccga 181 Query: 679 ggggttcccctgactccaagggagaaggagacgatgatcgacatcct 725 ||||| || ||||||||||||||||||||||| ||| | |||||||| Sbjct: 182 ggggtaccactgactccaagggagaaggagaccatgctagacatcct 228
>gb|DQ246136.1| Zea mays clone 93711 mRNA sequence Length = 894 Score = 79.8 bits (40), Expect = 2e-11 Identities = 88/104 (84%) Strand = Plus / Plus Query: 364 agaaatattagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattca 423 ||||| || |||||||| || || |||||||||||||| || |||||||||||||| ||| Sbjct: 201 agaaacatcagccacaacgttcgctgcactgagtgtgggagtcagtccattgaagactca 260 Query: 424 caagcagatgttgcagttctccttagaaggctaattcgtgatga 467 || |||||||| || ||||||||||| ||| || |||||||| Sbjct: 261 caggcagatgtagctattctccttagacagctgatccgtgatga 304 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 628 aagcacaggcaaaggaccaacgttcacatcatggc 662 ||||||||||||||||| ||||| ||||||||||| Sbjct: 465 aagcacaggcaaaggacgaacgtgcacatcatggc 499
>ref|NM_101390.2| Arabidopsis thaliana unknown protein (AT1G15220) mRNA, complete cds Length = 1173 Score = 79.8 bits (40), Expect = 2e-11 Identities = 154/192 (80%) Strand = Plus / Plus Query: 364 agaaatattagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattca 423 ||||| |||||||||||||| || |||||||||||||| || |||||||||||||| || Sbjct: 476 agaaacattagccacaatgttcgctgcactgagtgtggaagtcagtccattgaagactcg 535 Query: 424 caagcagatgttgcagttctccttagaaggctaattcgtgatgaaataaaatctggaaag 483 || |||||| | || ||||||||||| ||| || ||| |||| ||| | ||||||| Sbjct: 536 caggcagatatcgctattctccttagacagctgatccgtaatgagataggagctggaaaa 595 Query: 484 agtgataaggagatatacaaaaaactagaagaagactttggagaaacagttctatatgcc 543 | ||| || ||||| |||| || || || || || ||||| || ||||| || |||||| Sbjct: 596 actgacaaagagatctacagtaagctggaggatgaatttggggagacagtgctttatgcc 655 Query: 544 cctaaatttgat 555 || ||||||||| Sbjct: 656 ccaaaatttgat 667
>ref|NM_202105.1| Arabidopsis thaliana unknown protein (AT1G15220) mRNA, complete cds Length = 1202 Score = 79.8 bits (40), Expect = 2e-11 Identities = 154/192 (80%) Strand = Plus / Plus Query: 364 agaaatattagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattca 423 ||||| |||||||||||||| || |||||||||||||| || |||||||||||||| || Sbjct: 335 agaaacattagccacaatgttcgctgcactgagtgtggaagtcagtccattgaagactcg 394 Query: 424 caagcagatgttgcagttctccttagaaggctaattcgtgatgaaataaaatctggaaag 483 || |||||| | || ||||||||||| ||| || ||| |||| ||| | ||||||| Sbjct: 395 caggcagatatcgctattctccttagacagctgatccgtaatgagataggagctggaaaa 454 Query: 484 agtgataaggagatatacaaaaaactagaagaagactttggagaaacagttctatatgcc 543 | ||| || ||||| |||| || || || || || ||||| || ||||| || |||||| Sbjct: 455 actgacaaagagatctacagtaagctggaggatgaatttggggagacagtgctttatgcc 514 Query: 544 cctaaatttgat 555 || ||||||||| Sbjct: 515 ccaaaatttgat 526
>gb|AY097355.1| Arabidopsis thaliana At1g15220/F9L1_17 mRNA, complete cds Length = 480 Score = 79.8 bits (40), Expect = 2e-11 Identities = 154/192 (80%) Strand = Plus / Plus Query: 364 agaaatattagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattca 423 ||||| |||||||||||||| || |||||||||||||| || |||||||||||||| || Sbjct: 55 agaaacattagccacaatgttcgctgcactgagtgtggaagtcagtccattgaagactcg 114 Query: 424 caagcagatgttgcagttctccttagaaggctaattcgtgatgaaataaaatctggaaag 483 || |||||| | || ||||||||||| ||| || ||| |||| ||| | ||||||| Sbjct: 115 caggcagatatcgctattctccttagacagctgatccgtaatgagataggagctggaaaa 174 Query: 484 agtgataaggagatatacaaaaaactagaagaagactttggagaaacagttctatatgcc 543 | ||| || ||||| |||| || || || || || ||||| || ||||| || |||||| Sbjct: 175 actgacaaagagatctacagtaagctggaggatgaatttggggagacagtgctttatgcc 234 Query: 544 cctaaatttgat 555 || ||||||||| Sbjct: 235 ccaaaatttgat 246
>gb|AY050392.1| Arabidopsis thaliana At1g15220/F9L1_17 mRNA, complete cds Length = 1175 Score = 79.8 bits (40), Expect = 2e-11 Identities = 154/192 (80%) Strand = Plus / Plus Query: 364 agaaatattagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattca 423 ||||| |||||||||||||| || |||||||||||||| || |||||||||||||| || Sbjct: 478 agaaacattagccacaatgttcgctgcactgagtgtggaagtcagtccattgaagactcg 537 Query: 424 caagcagatgttgcagttctccttagaaggctaattcgtgatgaaataaaatctggaaag 483 || |||||| | || ||||||||||| ||| || ||| |||| ||| | ||||||| Sbjct: 538 caggcagatatcgctattctccttagacagctgatccgtaatgagataggagctggaaaa 597 Query: 484 agtgataaggagatatacaaaaaactagaagaagactttggagaaacagttctatatgcc 543 | ||| || ||||| |||| || || || || || ||||| || ||||| || |||||| Sbjct: 598 actgacaaagagatctacagtaagctggaggatgaatttggggagacagtgctttatgcc 657 Query: 544 cctaaatttgat 555 || ||||||||| Sbjct: 658 ccaaaatttgat 669
>gb|AY085498.1| Arabidopsis thaliana clone 154344 mRNA, complete sequence Length = 1202 Score = 79.8 bits (40), Expect = 2e-11 Identities = 154/192 (80%) Strand = Plus / Plus Query: 364 agaaatattagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattca 423 ||||| |||||||||||||| || |||||||||||||| || |||||||||||||| || Sbjct: 335 agaaacattagccacaatgttcgctgcactgagtgtggaagtcagtccattgaagactcg 394 Query: 424 caagcagatgttgcagttctccttagaaggctaattcgtgatgaaataaaatctggaaag 483 || |||||| | || ||||||||||| ||| || ||| |||| ||| | ||||||| Sbjct: 395 caggcagatatcgctattctccttagacagctgatccgtaatgagataggagctggaaaa 454 Query: 484 agtgataaggagatatacaaaaaactagaagaagactttggagaaacagttctatatgcc 543 | ||| || ||||| |||| || || || || || ||||| || ||||| || |||||| Sbjct: 455 actgacaaagagatctacagtaagctggaggatgaatttggggagacagtgctttatgcc 514 Query: 544 cctaaatttgat 555 || ||||||||| Sbjct: 515 ccaaaatttgat 526
>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence Length = 141984 Score = 77.8 bits (39), Expect = 8e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 364 agaaatattagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattca 423 ||||| |||||||||||||| || |||||||||||||| || |||||||||||||| || Sbjct: 56593 agaaacattagccacaatgttcgctgcactgagtgtggaagtcagtccattgaagactcg 56534 Query: 424 caagcagatgttgcagttctccttaga 450 || |||||| | || ||||||||||| Sbjct: 56533 caggcagatatcgctattctccttaga 56507
>emb|CU137658.1| Medicago truncatula chromosome 5 clone mth2-54e16, COMPLETE SEQUENCE Length = 112850 Score = 71.9 bits (36), Expect = 5e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 616 tgggcttaccaaaagcacaggcaaaggaccaacgttcacatcatggctctgaacctcgtc 675 ||||||||||| ||||| || |||| ||| |||||||| ||||||||||||||||| || Sbjct: 22599 tgggcttaccagaagcatagacaaaagactaacgttcatatcatggctctgaaccttgtt 22658 Query: 676 cgaggggttcccctgactccaagggagaagga 707 |||| ||||| |||| ||||| |||||||| Sbjct: 22659 agaggtgttccattgaccccaagagagaagga 22690 Score = 42.1 bits (21), Expect = 4.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 388 tgcactgagtgtggcagccagtccattgaagattcacaagc 428 |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 21906 tgcactgattgtgggagtcaatccattgaagattctcaagc 21946
>gb|AC073264.5| Homo sapiens BAC clone RP11-298A10 from 7, complete sequence Length = 200123 Score = 48.1 bits (24), Expect = 0.073 Identities = 27/28 (96%) Strand = Plus / Plus Query: 126 cctcgcctccgacccctcccccgcgcgc 153 ||||||||||||||| |||||||||||| Sbjct: 170264 cctcgcctccgacccgtcccccgcgcgc 170291
>emb|CT830066.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN086D05, full insert sequence Length = 1290 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 123 ctccctcgcctccgacccctcccccgc 149 |||||||||||||||||||||| |||| Sbjct: 359 ctccctcgcctccgacccctccgccgc 385
>emb|CT985266.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 879 Score = 46.1 bits (23), Expect = 0.29 Identities = 50/59 (84%) Strand = Plus / Minus Query: 379 aatgtacggtgcactgagtgtggcagccagtccattgaagattcacaagcagatgttgc 437 ||||| || ||||| ||||| ||||||||||| || |||||||| ||||| ||| |||| Sbjct: 416 aatgtgcgctgcaccgagtgcggcagccagtcgatcgaagattctcaagctgatattgc 358
>emb|CT983532.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 914 Score = 46.1 bits (23), Expect = 0.29 Identities = 50/59 (84%) Strand = Plus / Minus Query: 379 aatgtacggtgcactgagtgtggcagccagtccattgaagattcacaagcagatgttgc 437 ||||| || ||||| ||||| ||||||||||| || |||||||| ||||| ||| |||| Sbjct: 416 aatgtgcgctgcaccgagtgcggcagccagtcgatcgaagattctcaagctgatattgc 358
>emb|CT980350.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 946 Score = 46.1 bits (23), Expect = 0.29 Identities = 50/59 (84%) Strand = Plus / Minus Query: 379 aatgtacggtgcactgagtgtggcagccagtccattgaagattcacaagcagatgttgc 437 ||||| || ||||| ||||| ||||||||||| || |||||||| ||||| ||| |||| Sbjct: 416 aatgtgcgctgcaccgagtgcggcagccagtcgatcgaagattctcaagctgatattgc 358
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 123 ctccctcgcctccgacccctcccccgc 149 |||||||||||||||||||||| |||| Sbjct: 41339798 ctccctcgcctccgacccctccgccgc 41339824
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 123 ctccctcgcctccgacccctcccccgc 149 |||||||||||||||||||||| |||| Sbjct: 31291 ctccctcgcctccgacccctccgccgc 31317
>dbj|AK026479.1| Homo sapiens cDNA: FLJ22826 fis, clone KAIA4022, highly similar to AF121863 Homo sapiens sorting nexin 14 (SNX14) mRNA Length = 3576 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 511 gaagaagactttggagaaacagt 533 ||||||||||||||||||||||| Sbjct: 148 gaagaagactttggagaaacagt 170
>gb|U72251.1|OSU72251 Oryza sativa beta-1,3-glucanase precursor (Gns5) gene, complete cds Length = 1834 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 123 ctccctcgcctccgacccctcccccgc 149 |||||||||||||||||||||| |||| Sbjct: 1099 ctccctcgcctccgacccctccgccgc 1125
>dbj|AK104862.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E09, full insert sequence Length = 1296 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 123 ctccctcgcctccgacccctcccccgc 149 |||||||||||||||||||||| |||| Sbjct: 362 ctccctcgcctccgacccctccgccgc 388
>dbj|AK070677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063O17, full insert sequence Length = 1295 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 123 ctccctcgcctccgacccctcccccgc 149 |||||||||||||||||||||| |||| Sbjct: 361 ctccctcgcctccgacccctccgccgc 387
>dbj|AB027428.1| Oryza sativa mRNA for beta 1,3-glucanase, complete cds, clone:E1149 Length = 1280 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 123 ctccctcgcctccgacccctcccccgc 149 |||||||||||||||||||||| |||| Sbjct: 349 ctccctcgcctccgacccctccgccgc 375
>emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0115K01-H0319F09, complete sequence Length = 189580 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 141 ctcccccgcgcgcgctgcaccggtcg 166 ||||||||||||||| |||||||||| Sbjct: 150920 ctcccccgcgcgcgccgcaccggtcg 150895
>gb|AC067717.19| Homo sapiens 3 BAC RP11-484E7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 226233 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 249 ccagctcctcccccaagctccc 270 |||||||||||||||||||||| Sbjct: 126830 ccagctcctcccccaagctccc 126809
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 141 ctcccccgcgcgcgctgcaccggtcg 166 ||||||||||||||| |||||||||| Sbjct: 26414186 ctcccccgcgcgcgccgcaccggtcg 26414161
>gb|AC025613.14|AC025613 Homo sapiens chromosome 3 clone RP11-514J23, complete sequence Length = 172475 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 249 ccagctcctcccccaagctccc 270 |||||||||||||||||||||| Sbjct: 105904 ccagctcctcccccaagctccc 105925
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 141 ctcccccgcgcgcgctgcaccggtcg 166 ||||||||||||||| |||||||||| Sbjct: 54819 ctcccccgcgcgcgccgcaccggtcg 54794
>gb|BC124106.1| Danio rerio bone morphogenetic protein 15, mRNA (cDNA clone MGC:152740 IMAGE:8107380), complete cds Length = 1683 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 879 ccctgcttgaagtttgggata 899 ||||||||||||||||||||| Sbjct: 962 ccctgcttgaagtttgggata 942
>gb|BC115085.1| Danio rerio cDNA clone IMAGE:8102496, partial cds Length = 1872 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 879 ccctgcttgaagtttgggata 899 ||||||||||||||||||||| Sbjct: 851 ccctgcttgaagtttgggata 831
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 737 caccggcaaggaggtggtggt 757 ||||||||||||||||||||| Sbjct: 8057728 caccggcaaggaggtggtggt 8057708
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ctcgtcggcgcggcgctgctc 87 ||||||||||||||||||||| Sbjct: 1199485 ctcgtcggcgcggcgctgctc 1199505
>gb|AC100600.22| Mus musculus chromosome 9, clone RP23-157H17, complete sequence Length = 225538 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tcctcccccaagctcccccac 274 ||||||||||||||||||||| Sbjct: 60781 tcctcccccaagctcccccac 60801
>ref|XM_503331.1| Yarrowia lipolytica CLIB122, YALI0D26752g predicted mRNA Length = 3864 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 739 ccggcaaggaggtggtggtgg 759 ||||||||||||||||||||| Sbjct: 3716 ccggcaaggaggtggtggtgg 3736
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 cgcctccgacccctcccccgc 149 ||||||||||||||||||||| Sbjct: 1718388 cgcctccgacccctcccccgc 1718408
>emb|BX469895.7| Zebrafish DNA sequence from clone DKEY-152C18 in linkage group 19, complete sequence Length = 179493 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 ttggagaaacagttctatatg 541 ||||||||||||||||||||| Sbjct: 44964 ttggagaaacagttctatatg 44944
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ctcgtcggcgcggcgctgctc 87 ||||||||||||||||||||| Sbjct: 247512 ctcgtcggcgcggcgctgctc 247492
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ctcgtcggcgcggcgctgctc 87 ||||||||||||||||||||| Sbjct: 2515422 ctcgtcggcgcggcgctgctc 2515442
>emb|BX818307.1|CNS0ACI6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL71ZH10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 990 Score = 42.1 bits (21), Expect = 4.5 Identities = 66/81 (81%) Strand = Plus / Plus Query: 370 attagccacaatgtacggtgcactgagtgtggcagccagtccattgaagattcacaagca 429 |||||||||||||| || |||||| ||| ||| || |||| |||| |||| || || ||| Sbjct: 300 attagccacaatgttcgctgcacttagtttggaagtcagttcatttaagactcgcaggca 359 Query: 430 gatgttgcagttctccttaga 450 ||| | || ||||||||||| Sbjct: 360 gatatcgctattctccttaga 380
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 gatgaaataaaatctggaaag 483 ||||||||||||||||||||| Sbjct: 288754 gatgaaataaaatctggaaag 288774
>ref|NM_001020484.1| Danio rerio bone morphogenetic protein 15 (bmp15), mRNA gb|AY954923.1| Danio rerio bone morphogenetic protein-15 mRNA, complete cds Length = 1611 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 879 ccctgcttgaagtttgggata 899 ||||||||||||||||||||| Sbjct: 935 ccctgcttgaagtttgggata 915
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 699 ggagaaggagacgatgatcga 719 ||||||||||||||||||||| Sbjct: 1913699 ggagaaggagacgatgatcga 1913679
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 739 ccggcaaggaggtggtggtgg 759 ||||||||||||||||||||| Sbjct: 3556068 ccggcaaggaggtggtggtgg 3556048 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 196,676,811 Number of extensions: 10629480 Number of successful extensions: 226341 Number of sequences better than 10.0: 47 Number of HSP's gapped: 226341 Number of HSP's successfully gapped: 55 Length of query: 1186 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1163 Effective length of database: 18,503,978,556 Effective search space: 21520127060628 Effective search space used: 21520127060628 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)