ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf75c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os03g0102300:Os03g0102300 28 1.5
2AK067424:Os07g0551700 27 3.2
3Os11g0514100:Os11g0514100 25 9.5

>Os03g0102300:Os03g0102300 |
          Length = 1759
 Score = 28.1 bits (61), Expect = 1.5
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -2

Query: 173 WCNTLTRISHITVQLETVISHSQDGQKKNSKRRNYLSLRISLGSEK 36
           +CN + +ISH+      ++S  +    + S  +N LS+ IS+ SE+
Sbjct: 762 YCNHILQISHLCGAHTEMVSAIERALARISSSQNELSVNISVSSEQ 807



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>AK067424:Os07g0551700 |
          Length = 886

 Score = 26.9 bits (58), Expect = 3.2
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +2

Query: 47  RVKFVVTNSSFVLNFFFGHLVNVK*RFPVAL*YVRFESEYCTRMTLEFYFTF-GVERTGS 223
           RV  ++TN+ F++NF   H VN    F   + ++    E      ++F   F  V+ T  
Sbjct: 398 RVSALLTNAPFIINFDGDHYVNNSKAFRAGICFMLDRREGDNTAFVQFPQRFDDVDPTDR 457

Query: 224 LCNY 235
            CN+
Sbjct: 458 YCNH 461



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>Os11g0514100:Os11g0514100 |
          Length = 1674

 Score = 25.4 bits (54), Expect = 9.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 241  CDIVTQTTCAFNAKSKIKF*GHSGAIL*LESHILQCNWKP 122
            CD+V Q          +KF   S  I  +  +++ CNWKP
Sbjct: 1305 CDLVAQ---------HMKFHSCSDTISRIYMYLMDCNWKP 1335


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 7,295,193
Number of extensions: 134799
Number of successful extensions: 303
Number of sequences better than 10.0: 3
Number of HSP's gapped: 303
Number of HSP's successfully gapped: 3
Length of query: 100
Length of database: 15,399,855
Length adjustment: 70
Effective length of query: 30
Effective length of database: 12,596,985
Effective search space: 377909550
Effective search space used: 377909550
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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