ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf71n05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os03g0791500:Os03g0791500 | 30 | 1.2 | 2 | AK109985: | 30 | 1.6 | 3 | Os11g0195500:Os11g0195500 | 30 | 2.0 | 4 | Os02g0684100:Os02g0684100 | 29 | 2.7 | 5 | AK121620:Os03g0793500 | 29 | 3.5 | 6 | AK103407:Os03g0793500 | 29 | 3.5 | 7 | AK107647: | 28 | 4.5 | 8 | AK102819:Os01g0744300 | 28 | 4.5 | 9 | AK100357:Os05g0200500 | 28 | 4.5 | 10 | AK072116:Os05g0200500 | 28 | 4.5 | 11 | Os01g0250000:Os01g0250000 | 28 | 5.9 | 12 | AK068031:Os05g0589700 | 28 | 5.9 | 13 | Os12g0611200:Os12g0611200 | 28 | 7.8 | 14 | Os01g0795100:Os01g0795100 | 28 | 7.8 | 15 | AK109067:Os01g0794800 | 28 | 7.8 | 16 | AK063520:Os01g0794800 | 28 | 7.8 | 17 | AF200467:Os01g0795000 | 28 | 7.8 | 18 | AK072575:Os07g0637200 | 28 | 7.8 |
|---|
>Os03g0791500:Os03g0791500 | Length = 464 Score = 30.4 bits (67), Expect = 1.2 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = +1 Query: 340 RAPLEPWPSRSRRILPPSCGLPSPLRRQVQEAWTLRLWPWRQVQAWQAHAPLWREA-WSP 516 R L P R RR PP G P PL + RL R+ + A W WS Sbjct: 392 RRGLPPPQLRRRRPRPPRVGEPPPLAHPPAASRGARLGRGRKA---EGGAVWWAPGLWSG 448 Query: 517 WWKTQVEIV 543 W + +VE+V Sbjct: 449 WVEVEVEVV 457
>AK109985: | Length = 122 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 3/29 (10%) Frame = +1 Query: 313 RCGGHGGLWRAP---LEPWPSRSRRILPP 390 RCGG G W AP L +P RR++PP Sbjct: 51 RCGGEGEAWSAPAVGLLLFPGAIRRLVPP 79
>Os11g0195500:Os11g0195500 | Length = 659 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = -2 Query: 128 EGMQGRRWVETSRRLGSSPQALCCLCRYR----TPC 33 E R+W++TS+R+G SP C R TPC Sbjct: 398 EAAPARQWLKTSKRVGRSPSLNCASLATRLGRITPC 433
>Os02g0684100:Os02g0684100 | Length = 810 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 569 PLDRSTWKKTISTCVFHQGDHA 504 P STW K ++ CV H+G HA Sbjct: 542 PKSGSTWLKALAFCVVHRGRHA 563
>AK121620:Os03g0793500 | Length = 707 Score = 28.9 bits (63), Expect = 3.5 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -2 Query: 149 IHARLVEEGMQG--RRWVETSRRLGSSPQALCCLC 51 I RL +G QG + ++ +++ +SP+ LCC C Sbjct: 358 IRGRLPWQGYQGDNKSFLVCKKKMATSPELLCCFC 392
>AK103407:Os03g0793500 | Length = 707 Score = 28.9 bits (63), Expect = 3.5 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -2 Query: 149 IHARLVEEGMQG--RRWVETSRRLGSSPQALCCLC 51 I RL +G QG + ++ +++ +SP+ LCC C Sbjct: 358 IRGRLPWQGYQGDNKSFLVCKKKMATSPELLCCFC 392
>AK107647: | Length = 318 Score = 28.5 bits (62), Expect = 4.5 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 5/53 (9%) Frame = -2 Query: 503 SLQRGACACHA*T-----CRHGHNRSVHAS*TCRRNGDGNPQDGGSIRRDRDG 360 S + GAC H CRHG HA RR G + G + R RDG Sbjct: 128 SRRPGACGGHRGARCERRCRHGCRVVDHAQAVVRRQGGSSRSPGFARARTRDG 180
>AK102819:Os01g0744300 | Length = 690 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -2 Query: 149 IHARLVEEGMQGRR--WVETSRRLGSSPQALCCLC 51 + RL +G QG ++ +++ +SP++LCC C Sbjct: 337 LRGRLPWQGYQGENKGFLVCKKKMATSPESLCCFC 371
>AK100357:Os05g0200500 | Length = 607 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -2 Query: 149 IHARLVEEGMQGRR--WVETSRRLGSSPQALCCLC 51 + RL +G QG ++ +++ +SP++LCC C Sbjct: 253 LRGRLPWQGYQGENKGFLVCKKKMATSPESLCCFC 287
>AK072116:Os05g0200500 | Length = 607 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -2 Query: 149 IHARLVEEGMQGRR--WVETSRRLGSSPQALCCLC 51 + RL +G QG ++ +++ +SP++LCC C Sbjct: 253 LRGRLPWQGYQGENKGFLVCKKKMATSPESLCCFC 287
>Os01g0250000:Os01g0250000 | Length = 442 Score = 28.1 bits (61), Expect = 5.9 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 8/72 (11%) Frame = -3 Query: 232 VCSC*WIATMSMPVSLWLRRVIIISRR----ASMPG---LWRRVCRVGDGW-RRVGAWVV 77 +C W++T S P L RRV+ R A++ G L RR V W R+ W + Sbjct: 208 LCRRCWVSTTSPPACLRCRRVVPPPARLAYYATVVGRLHLHRRPASVAADWCLRLHGWPI 267 Query: 76 APKPFAVCVATA 41 P V + TA Sbjct: 268 MPPLLGVYIFTA 279
>AK068031:Os05g0589700 | Length = 488 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -2 Query: 104 VETSRRLGSSPQALCCLCRYRTPCFHLPWR 15 V SR P LC +C+++TP F P R Sbjct: 347 VSLSRSAPPGPPPLCSICQHKTPVFGKPPR 376
>Os12g0611200:Os12g0611200 | Length = 628 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 169 IIISRRASMPGLWRRVCRVGDGWRRVGAWVVAPKP 65 +++SRRA++P W G+R GA A +P Sbjct: 33 VVVSRRATIPAAWFHSSPAWLGFRETGAAGAAARP 67
>Os01g0795100:Os01g0795100 | Length = 802 Score = 27.7 bits (60), Expect = 7.8 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = -3 Query: 145 MPGLWRRVCRVGDGW 101 +P W+ VC+VG+GW Sbjct: 224 VPARWKGVCQVGEGW 238
>AK109067:Os01g0794800 | Length = 295 Score = 27.7 bits (60), Expect = 7.8 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = -3 Query: 145 MPGLWRRVCRVGDGW 101 +P W+ VC+VG+GW Sbjct: 80 VPARWKGVCQVGEGW 94
>AK063520:Os01g0794800 | Length = 737 Score = 27.7 bits (60), Expect = 7.8 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = -3 Query: 145 MPGLWRRVCRVGDGW 101 +P W+ VC+VG+GW Sbjct: 162 VPARWKGVCQVGEGW 176
>AF200467:Os01g0795000 | Length = 736 Score = 27.7 bits (60), Expect = 7.8 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = -3 Query: 145 MPGLWRRVCRVGDGW 101 +P W+ VC+VG+GW Sbjct: 162 VPARWKGVCQVGEGW 176
>AK072575:Os07g0637200 | Length = 652 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = +1 Query: 307 CRRCGGHGGLWRAPLEPWPSRSRRILPP 390 C GH G APL+ WPS PP Sbjct: 374 CSPSAGHNGAPTAPLQSWPSAPPYHSPP 401 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,611,472 Number of extensions: 342026 Number of successful extensions: 1305 Number of sequences better than 10.0: 18 Number of HSP's gapped: 1305 Number of HSP's successfully gapped: 18 Length of query: 232 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 135 Effective length of database: 11,515,878 Effective search space: 1554643530 Effective search space used: 1554643530 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
