| Clone Name | FLbaf75a04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL157771.11| Human DNA sequence from clone RP11-67J18 on chromosome 13 Contains the 5' end of a novel gene (including KIAA0865), possible ortholog of rat myosin heavy chain Myr 8 (Loc192253), complete sequence Length = 115243 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 845 ctatgagaaagaagaagaactgg 867 ||||||||||||||||||||||| Sbjct: 75795 ctatgagaaagaagaagaactgg 75817
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 415 agtcttttccaaaatccgtcgt 436 |||||||||||||||||||||| Sbjct: 9607114 agtcttttccaaaatccgtcgt 9607135
>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165137 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 415 agtcttttccaaaatccgtcgt 436 |||||||||||||||||||||| Sbjct: 70425 agtcttttccaaaatccgtcgt 70446
>emb|CR847893.16| Zebrafish DNA sequence from clone CH211-242E19, complete sequence Length = 165668 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 848 tgagaaagaagaagaactggg 868 ||||||||||||||||||||| Sbjct: 15766 tgagaaagaagaagaactggg 15786
>gb|AC188123.1| Trichinella spiralis chromosome UNK clone TS195-50H12, complete sequence Length = 174130 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1053 tctgttgatttgttgatagagcgcc 1077 |||||| |||||||||||||||||| Sbjct: 107981 tctgttaatttgttgatagagcgcc 108005
>gb|AC151571.1| Latimeria menadoensis clone VMRC4-140H19, complete sequence Length = 187392 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1107 aaatttaatgcaatttgaatt 1127 ||||||||||||||||||||| Sbjct: 100003 aaatttaatgcaatttgaatt 100023
>emb|BX927336.18| Zebrafish DNA sequence from clone CH211-215P11 in linkage group 5, complete sequence Length = 200686 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 848 tgagaaagaagaagaactggg 868 ||||||||||||||||||||| Sbjct: 53670 tgagaaagaagaagaactggg 53650
>ref|XM_809308.1| Trypanosoma cruzi strain CL Brener ATP-dependent RNA helicase (Tc00.1047053511755.60) partial mRNA Length = 6723 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 tccaaaatccgtcgtatcatg 442 ||||||||||||||||||||| Sbjct: 2042 tccaaaatccgtcgtatcatg 2022
>emb|BX005245.26| Zebrafish DNA sequence from clone DKEY-56M15 in linkage group 4, complete sequence Length = 227565 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 848 tgagaaagaagaagaactggg 868 ||||||||||||||||||||| Sbjct: 217812 tgagaaagaagaagaactggg 217832
>emb|BX649303.18| Zebrafish DNA sequence from clone CH211-266C8 in linkage group 4, complete sequence Length = 65932 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 848 tgagaaagaagaagaactggg 868 ||||||||||||||||||||| Sbjct: 63517 tgagaaagaagaagaactggg 63537
>emb|BX649308.13| Zebrafish DNA sequence from clone CH211-223K15 in linkage group 11, complete sequence Length = 179056 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 848 tgagaaagaagaagaactggg 868 ||||||||||||||||||||| Sbjct: 109393 tgagaaagaagaagaactggg 109413
>emb|BX640461.7| Zebrafish DNA sequence from clone CH211-227E10 in linkage group 4, complete sequence Length = 190826 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 848 tgagaaagaagaagaactggg 868 ||||||||||||||||||||| Sbjct: 54896 tgagaaagaagaagaactggg 54876
>emb|BX936362.13| Zebrafish DNA sequence from clone DKEY-190J3 in linkage group 22, complete sequence Length = 164857 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 848 tgagaaagaagaagaactggg 868 ||||||||||||||||||||| Sbjct: 17025 tgagaaagaagaagaactggg 17045 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 848 tgagaaagaagaagaactggg 868 ||||||||||||||||||||| Sbjct: 69661 tgagaaagaagaagaactggg 69641
>emb|BX649634.8| Zebrafish DNA sequence from clone CH211-284G18 in linkage group 2, complete sequence Length = 154030 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 780 ggacagtgtggagaagagcga 800 ||||||||||||||||||||| Sbjct: 77063 ggacagtgtggagaagagcga 77043
>emb|BX664606.17| Zebrafish DNA sequence from clone CH211-171L17 in linkage group 22, complete sequence Length = 181178 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 848 tgagaaagaagaagaactggg 868 ||||||||||||||||||||| Sbjct: 158467 tgagaaagaagaagaactggg 158487
>emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20, complete sequence Length = 198777 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 848 tgagaaagaagaagaactggg 868 ||||||||||||||||||||| Sbjct: 171004 tgagaaagaagaagaactggg 170984
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 agcttgttctcgtgggacatc 293 ||||||||||||||||||||| Sbjct: 3484650 agcttgttctcgtgggacatc 3484630 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 180,715,523 Number of extensions: 9556181 Number of successful extensions: 158544 Number of sequences better than 10.0: 17 Number of HSP's gapped: 158544 Number of HSP's successfully gapped: 18 Length of query: 1162 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1139 Effective length of database: 18,503,978,556 Effective search space: 21076031575284 Effective search space used: 21076031575284 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)