ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf71m08 |
|---|---|
| Clone Library Name | barley_pub |
>Q9N491:SQV2_CAEEL Beta-1,3-galactosyltransferase sqv-2 - Caenorhabditis elegans| Length = 330 Score = 65.9 bits (159), Expect = 3e-10 Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 3/212 (1%) Frame = +1 Query: 196 IGVYTGFGSRLKRNTFRGSWMPRGDALKKLEEKG---VVIRFVIGRSPNRGDSLDRNINE 366 I + T +R R +W +L KG + +F +G + R + E Sbjct: 62 ISILTSPNETERRQNVRDTWF-------RLSTKGPSVFIAKFAVGTMGLAAEDR-RLLAE 113 Query: 367 ESRKTNDFLILESHEEAAEELPKKVKFFFSAAIEAWDAEFYVKVDDNINLDLAGLIEMLA 546 E+ K D +L+ HEE+ E L KK F A + +F++K D + + + LI L Sbjct: 114 ENEKFGDLALLDRHEESYERLAKKTLACFVHAFANFKFKFFLKTDIDSFVRITPLIINLK 173 Query: 547 GRRGSHGLYMGCMKSGAVVSXXXXXXXXXXXXKFGDSRTYFRHASGSLFILSNNLARYIN 726 + LY G + A ++ Y + G ++LS L R++ Sbjct: 174 QIQDPM-LYWGFLDGRA----KPFRKGKWKEPEWNLCDRYLPYQLGGGYVLSYELIRFLA 228 Query: 727 INSASLQSYAHDDISVGSWMMGLNATYVDDDR 822 IN+ + Y ++D+SVG+W+ GL+ YV D R Sbjct: 229 INAQLFRHYRNEDVSVGAWIGGLDVKYVHDPR 260
>Q6NRQ1:B3GL2_XENLA UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 - Xenopus| laevis (African clawed frog) Length = 486 Score = 60.8 bits (146), Expect = 9e-09 Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 1/179 (0%) Frame = +1 Query: 349 DRNINEESRKTNDFLILESHEEAAEELPKKVKFFFSAAIEAWDAEFYVKVDDNINLDLAG 528 D + EES D ++ + + +P K+ F+ ++ EF +K DD+ +D+ Sbjct: 293 DALLQEESTTFQD-IVFVNVVDTYRNVPSKLLNFYRWTVQLTRFEFLLKTDDDCFIDIDN 351 Query: 529 LIEMLAGRR-GSHGLYMGCMKSGAVVSXXXXXXXXXXXXKFGDSRTYFRHASGSLFILSN 705 +++M+A + + G + V S Y A GS +I+SN Sbjct: 352 VLKMVAQKELQKENAWWGNFRLNWAVDRTGKWQELEYL-----SPAYPAFACGSGYIISN 406 Query: 706 NLARYININSASLQSYAHDDISVGSWMMGLNATYVDDDRLCCLSSVQEKVCSIG*AEGP 882 ++ +++ +NS L++Y +D+S+G WM + + D R C EK C G P Sbjct: 407 DIVQWLAVNSQRLKTYQGEDVSMGIWMSAIGPSRYQDSRWLC-----EKKCEAGMLSSP 460
>Q5M900:B3GL2_XENTR UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 - Xenopus| tropicalis (Western clawed frog) (Silurana tropicalis) Length = 488 Score = 54.7 bits (130), Expect = 7e-07 Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 1/179 (0%) Frame = +1 Query: 349 DRNINEESRKTNDFLILESHEEAAEELPKKVKFFFSAAIEAWDAEFYVKVDDNINLDLAG 528 D + EES D + + + +P K+ F+ E EF +K DD+ +D+ Sbjct: 295 DALLQEESTTFQDIVFVHV-VDTYRNVPSKLLNFYQWTAEFTSFEFLLKTDDDCFIDIEN 353 Query: 529 LIEMLAGRR-GSHGLYMGCMKSGAVVSXXXXXXXXXXXXKFGDSRTYFRHASGSLFILSN 705 ++E +A ++ + G + V S Y A GS +++S Sbjct: 354 VLEKIAHKQLQKENTWWGNFRLNWAVDRTGKWQELEYL-----SPAYPAFACGSGYVISQ 408 Query: 706 NLARYININSASLQSYAHDDISVGSWMMGLNATYVDDDRLCCLSSVQEKVCSIG*AEGP 882 ++ +++ NS L++Y +D+S+G WM + + D C EK C G P Sbjct: 409 DIVQWLASNSQRLKTYQGEDVSMGIWMSAIGPSRYQDSHWLC-----EKKCEAGMLSSP 462
>Q502B3:B3GL2_DANRE UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 - Danio| rerio (Zebrafish) (Brachydanio rerio) Length = 491 Score = 53.1 bits (126), Expect = 2e-06 Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 2/180 (1%) Frame = +1 Query: 349 DRNINEESRKTNDFLILESHEEAAEELPKKVKFFFSAAIEAWDAEFYVKVDDNINLDLAG 528 D + EES + D + ++ +P K+ F+ ++E D +K DD+ +D+ Sbjct: 300 DEALQEESLRHGDMVFVDV-VGTYRNVPSKLLQFYKWSVENADFSLLLKTDDDCFIDVDA 358 Query: 529 LIEMLAGRRGSH-GLYMGCMKSGAVVSXXXXXXXXXXXXKFGDSRTYFRHASGSLFILSN 705 ++ + RR +H L+ G + V S Y A GS +++S Sbjct: 359 VLMKMQRRRLTHTSLWWGNFRQNWAVDRVGKWQELEYA-----SPAYPAFACGSGYVVSR 413 Query: 706 NLARYININSASLQSYAHDDISVGSWMMGLN-ATYVDDDRLCCLSSVQEKVCSIG*AEGP 882 +L +++ N+ L++Y +D+S+G WM + Y D LC EK C + P Sbjct: 414 DLVQWLASNAQHLKAYQGEDVSMGIWMAAVGPRKYQDSGWLC------EKECYVDMLSSP 467
>Q96L58:B3GT6_HUMAN Beta-1,3-galactosyltransferase 6 - Homo sapiens (Human)| Length = 329 Score = 52.4 bits (124), Expect = 3e-06 Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Frame = +1 Query: 229 KRNTFRGSWMPRGDALKKLEEKGVVIRFVIGRSPNRGDSLDRNINEESRKTNDFLILESH 408 +R+ R +W+ R A V RF +G + G R + E + D L+L + Sbjct: 72 RRSVIRSTWLARRGA-----PGDVWARFAVGTA-GLGAEERRALEREQARHGDLLLLPAL 125 Query: 409 EEAAEELPKKVKFFFSAAIEAWDAEFYVKVDDNINLDLAGLIEMLAGRRGSHG--LYMGC 582 +A E L KV + E EF +K DD+ L L+ L R + LY G Sbjct: 126 RDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGF 185 Query: 583 MKS-GAVVSXXXXXXXXXXXXKFGDSRTYFRHASGSLFILSNNLARYININSASLQSYAH 759 G V + Y +A G ++LS +L Y+ ++ L+++ Sbjct: 186 FSGRGRVKPGGRWREAAWQLCDY-----YLPYALGGGYVLSADLVHYLRLSRDYLRAWHS 240 Query: 760 DDISVGSWMMGLNATYVDDDR 822 +D+S+G+W+ ++ D R Sbjct: 241 EDVSLGAWLAPVDVQREHDPR 261
>Q91Z92:B3GT6_MOUSE Beta-1,3-galactosyltransferase 6 - Mus musculus (Mouse)| Length = 325 Score = 50.1 bits (118), Expect = 2e-05 Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Frame = +1 Query: 229 KRNTFRGSWMPRGDALKKLEEKGVVIRFVIGRSPNRGDSLDRNINEESRKTNDFLILESH 408 +R R +W+ ++ + V RF +G G R + E + D L+L + Sbjct: 66 RRTAVRSTWLAPE---RRGGPEDVWARFAVGTG-GLGSEERRALELEQAQHGDLLLLPAL 121 Query: 409 EEAAEELPKKVKFFFSAAIEAWDAEFYVKVDDNINLDLAGLIEMLAGRRGSHG--LYMGC 582 +A E L KV + E D EF +K DD+ L ++ L R + LY G Sbjct: 122 RDAYENLTAKVLAMLTWLDERVDFEFVLKADDDSFARLDAILVDLRAREPARRRRLYWGF 181 Query: 583 MKS-GAVVSXXXXXXXXXXXXKFGDSRTYFRHASGSLFILSNNLARYININSASLQSYAH 759 G V + Y +A G ++LS +L Y+ ++ L+++ Sbjct: 182 FSGRGRVKPGGRWREAAWQLCDY-----YLPYALGGGYVLSADLVHYLRLSREYLRAWHS 236 Query: 760 DDISVGSWMMGLNATYVDDDR 822 +D+S+G+W+ ++ D R Sbjct: 237 EDVSLGTWLAPVDVQREHDPR 257
>Q8BG28:B3GL2_MOUSE UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 - Mus| musculus (Mouse) Length = 504 Score = 50.1 bits (118), Expect = 2e-05 Identities = 44/213 (20%), Positives = 84/213 (39%), Gaps = 7/213 (3%) Frame = +1 Query: 265 GDALKKLEEKGVVIRFVIGRSPNRGDSL------DRNINEESRKTNDFLILESHEEAAEE 426 G + ++E ++R + R D + D + EES +D + ++ + Sbjct: 275 GGFIYTVQEGDALLRSLYSRPQRLADHIQDLQVEDALLQEESSVHDDIVFVDV-VDTYRN 333 Query: 427 LPKKVKFFFSAAIEAWDAEFYVKVDDNINLDLAGLIEMLAGRR-GSHGLYMGCMKSGAVV 603 +P K+ F+ +E+ + +K DD+ +DL + +A + + G + V Sbjct: 334 VPAKLLNFYRWTVESTSFDLLLKTDDDCYIDLEAVFNRIAQKNLDGPNFWWGNFRLNWAV 393 Query: 604 SXXXXXXXXXXXXKFGDSRTYFRHASGSLFILSNNLARYININSASLQSYAHDDISVGSW 783 S Y A GS +++S ++ ++ NS L++Y +D+S+G W Sbjct: 394 DRTGKWQELEYP-----SPAYPAFACGSGYVISKDIVDWLAGNSRRLKTYQGEDVSMGIW 448 Query: 784 MMGLNATYVDDDRLCCLSSVQEKVCSIG*AEGP 882 M + D C EK C G P Sbjct: 449 MAAIGPKRHQDSLWLC-----EKTCETGMLSSP 476
>Q8NCR0:B3GL2_HUMAN UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 - Homo| sapiens (Human) Length = 500 Score = 48.9 bits (115), Expect = 4e-05 Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 1/179 (0%) Frame = +1 Query: 349 DRNINEESRKTNDFLILESHEEAAEELPKKVKFFFSAAIEAWDAEFYVKVDDNINLDLAG 528 D + EES +D + ++ + +P K+ F+ +E +K DD+ +DL Sbjct: 307 DALLKEESSIYDDIVFVDV-VDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDLEA 365 Query: 529 LIEMLAGRR-GSHGLYMGCMKSGAVVSXXXXXXXXXXXXKFGDSRTYFRHASGSLFILSN 705 + + + + G + V S Y A GS +++S Sbjct: 366 VFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYP-----SPAYPAFACGSGYVISK 420 Query: 706 NLARYININSASLQSYAHDDISVGSWMMGLNATYVDDDRLCCLSSVQEKVCSIG*AEGP 882 ++ +++ NS L++Y +D+S+G WM + D C EK C G P Sbjct: 421 DIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLC-----EKTCETGMLSSP 474
>Q8K0J2:B3GN7_MOUSE UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 - Mus| musculus (Mouse) Length = 397 Score = 38.9 bits (89), Expect = 0.037 Identities = 28/115 (24%), Positives = 54/115 (46%) Frame = +1 Query: 433 KKVKFFFSAAIEAWDAEFYVKVDDNINLDLAGLIEMLAGRRGSHGLYMGCMKSGAVVSXX 612 K++ F I + F K DD++ ++ L+E L+ R+ L++G + A Sbjct: 214 KEIHFLKWLDIYCPNVPFVFKGDDDVFVNPTNLLEFLSDRQPQENLFVGDVLKHARPIRK 273 Query: 613 XXXXXXXXXXKFGDSRTYFRHASGSLFILSNNLARYININSASLQSYAHDDISVG 777 +G + TY +A G F++S +LAR ++ +L+ + DD+ +G Sbjct: 274 KDNKYYIPAVMYGKA-TYPPYAGGGGFLMSGSLARQLHHACDTLELFPIDDVFLG 327
>Q8NFL0:B3GN7_HUMAN UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 -| Homo sapiens (Human) Length = 401 Score = 37.4 bits (85), Expect = 0.11 Identities = 28/115 (24%), Positives = 53/115 (46%) Frame = +1 Query: 433 KKVKFFFSAAIEAWDAEFYVKVDDNINLDLAGLIEMLAGRRGSHGLYMGCMKSGAVVSXX 612 K++ F I F K DD++ ++ L+E LA R+ L++G + A Sbjct: 218 KEIHFLKWLDIYCPHVPFIFKGDDDVFVNPTNLLEFLADRQPQENLFVGDVLQHARPIRR 277 Query: 613 XXXXXXXXXXKFGDSRTYFRHASGSLFILSNNLARYININSASLQSYAHDDISVG 777 +G + +Y +A G F+++ +LAR ++ +L+ Y DD+ +G Sbjct: 278 KDNKYYIPGALYGKA-SYPPYAGGGGFLMAGSLARRLHHACDTLELYPIDDVFLG 331
>Q66H69:B3GN7_RAT UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 -| Rattus norvegicus (Rat) Length = 397 Score = 36.6 bits (83), Expect = 0.18 Identities = 27/115 (23%), Positives = 53/115 (46%) Frame = +1 Query: 433 KKVKFFFSAAIEAWDAEFYVKVDDNINLDLAGLIEMLAGRRGSHGLYMGCMKSGAVVSXX 612 K++ F I + F K DD++ ++ L+E L+ R+ L++G + A Sbjct: 214 KEIHFLKWLDIYCPNVPFIFKGDDDVFVNPTNLLEFLSDRQPQENLFVGDVLKHARPIRK 273 Query: 613 XXXXXXXXXXKFGDSRTYFRHASGSLFILSNNLARYININSASLQSYAHDDISVG 777 + + TY +A G F++S +LAR ++ +L+ + DD+ +G Sbjct: 274 KDNKYYIPAVMYSKA-TYPPYAGGGGFLMSGSLARQLHHACDTLELFPIDDVFLG 327
>Q9BYG0:B3GN5_HUMAN UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 -| Homo sapiens (Human) Length = 378 Score = 33.9 bits (76), Expect = 1.2 Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 5/203 (2%) Frame = +1 Query: 184 ILAVIGVYTGFGSRLKRNTFRGSWMPRGDALKKLEEKGVVIRFVIGR-SPNRGDSLDRNI 360 +L ++ V T + +R+ R +W +L + F +G +P G+ L R + Sbjct: 88 VLLLLFVKTAPENYDRRSGIRRTWGNENYVRSQLNAN-IKTLFALGTPNPLEGEELQRKL 146 Query: 361 NEESRKTNDFLILESHEEAAEELPKKVKFFFS-AAIEAWDAEFYVKVDDNINLDLAGLIE 537 E ++ ND +I + ++ L K+ FS A A+F + DD+I + + LIE Sbjct: 147 AWEDQRYND-IIQQDFVDSFYNLTLKLLMQFSWANTYCPHAKFLMTADDDIFIHMPNLIE 205 Query: 538 MLAG--RRGSHGLYMGCMKSGAVVSXXXXXXXXXXXXKFGDSRTYFRHASGSLFILSNNL 711 L + G ++G + GA + Y + +G+ +++S ++ Sbjct: 206 YLQSLEQIGVQDFWIGRVHRGAPPIRDKSSKYYVSYEMY-QWPAYPDYTAGAAYVISGDV 264 Query: 712 ARYININSASLQSYAH-DDISVG 777 A + S +L S + DD+ +G Sbjct: 265 AAKVYEASQTLNSSLYIDDVFMG 287
>Q5ZLM0:CDC73_CHICK Parafibromin - Gallus gallus (Chicken)| Length = 531 Score = 32.7 bits (73), Expect = 2.6 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Frame = -2 Query: 288 LKLL*SITSGHP-----GATEGVPLEPGAEASVNSNDRKDLLPVRTLGTSTASPIPPQVP 124 L LL ++ HP ATE +P+ V DRKDLL TST+S I P Sbjct: 61 LFLLNNVHLSHPVYVRRAATENIPV-------VRRPDRKDLLAYLNGETSTSSSIDRSAP 113 Query: 123 LALGL 109 L +GL Sbjct: 114 LEIGL 118
>P77967:CRYD_SYNY3 Cryptochrome DASH - Synechocystis sp. (strain PCC 6803)| Length = 489 Score = 31.6 bits (70), Expect = 5.9 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%) Frame = +3 Query: 174 QEEDPCGHWSLHWL----RLPAQEEHLPWLLDA 260 Q+ DP G + HWL LP + H PWLL A Sbjct: 419 QQYDPQGTYLRHWLPELKNLPGDKIHQPWLLSA 451
>Q4ZIN3:MBRL_HUMAN Membralin - Homo sapiens (Human)| Length = 620 Score = 31.6 bits (70), Expect = 5.9 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -1 Query: 1012 FLHIFHSFIYFIHPHRLPAIGVYKMANVQKHLFIRTPPSEGGQLVLP 872 +L I HS IYF H + LPAI + +Q+ L P G LP Sbjct: 435 WLFIQHSMIYFFHHYELPAI--LQQVRIQEMLLQAPPLGPGTPTALP 479
>Q8CIV2:MBRL_MOUSE Membralin - Mus musculus (Mouse)| Length = 574 Score = 31.2 bits (69), Expect = 7.7 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -1 Query: 1012 FLHIFHSFIYFIHPHRLPAIGVYKMANVQKHLFIRTPPSEGGQLVLP 872 +L I HS IYF H + LPAI + +Q+ L P G LP Sbjct: 426 WLFIQHSMIYFFHHYELPAI--LQQIRIQEMLLQTPPLGPGTPTALP 470 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 183,305,255 Number of extensions: 4053022 Number of successful extensions: 10713 Number of sequences better than 10.0: 16 Number of HSP's gapped: 10702 Number of HSP's successfully gapped: 16 Length of query: 358 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 244 Effective length of database: 69,416,809 Effective search space: 16937701396 Effective search space used: 16937701396 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
