ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf71k19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O00401:WASL_HUMAN Neural Wiskott-Aldrich syndrome protein - Homo... 36 0.78
2Q7NH85:IF2_GLOVI Translation initiation factor IF-2 - Gloeobacte... 35 1.3
3Q09578:COL75_CAEEL Putative cuticle collagen 75 - Caenorhabditis... 35 1.7
4Q8K1I7:WIPF1_MOUSE WAS/WASL-interacting protein family member 1 ... 35 1.7
5P02465:CO1A2_BOVIN Collagen alpha-2(I) chain precursor - Bos tau... 34 2.3
6Q80X19:COEA1_MOUSE Collagen alpha-1(XIV) chain precursor - Mus m... 33 3.9
7Q12446:LAS17_YEAST Proline-rich protein LAS17 - Saccharomyces ce... 33 3.9
8Q6YRJ4:Y020_ONYPE Putative ABC transporter ATP-binding protein P... 33 5.0
9Q9C5S0:AGP9_ARATH Classical arabinogalactan protein 9 precursor ... 33 5.0
10Q46837:ACFD_ECOLI Putative lipoprotein acfD homolog precursor - ... 33 5.0
11P32018:COEA1_CHICK Collagen alpha-1(XIV) chain precursor - Gallu... 33 6.6
12P34643:YOQ5_CAEEL Uncharacterized protein ZK512.5 - Caenorhabdit... 33 6.6
13O10341:Y091_NPVOP Hypothetical 29.3 kDa protein - Orgyia pseudot... 33 6.6
14P08123:CO1A2_HUMAN Collagen alpha-2(I) chain precursor - Homo sa... 32 8.6
15O46392:CO1A2_CANFA Collagen alpha-2(I) chain precursor - Canis f... 32 8.6
16O60184:YG49_SCHPO TPR repeat-containing protein C23E6.09 - Schiz... 32 8.6
17Q00056:HXA4_HUMAN Homeobox protein Hox-A4 - Homo sapiens (Human) 32 8.6

>O00401:WASL_HUMAN Neural Wiskott-Aldrich syndrome protein - Homo sapiens (Human)|
          Length = 505
 Score = 35.8 bits (81), Expect = 0.78
 Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
 Frame = +1

Query: 10  PTPPPINIGKSPLPIHGR-----EPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSV 174
           P PPP N G  P P  GR      PS  P A   P   S PS+ +   P     PPP   
Sbjct: 290 PPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPA 349

Query: 175 PP 180
            P
Sbjct: 350 LP 351



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>Q7NH85:IF2_GLOVI Translation initiation factor IF-2 - Gloeobacter violaceus|
          Length = 925

 Score = 35.0 bits (79), Expect = 1.3
 Identities = 38/155 (24%), Positives = 56/155 (36%), Gaps = 11/155 (7%)
 Frame = +1

Query: 10  PTPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSVPPWRS 189
           PTP P    ++P P+  R P+    AK  P     P      QP E   P P + PP R 
Sbjct: 204 PTPLPAPAAEAPQPV--RPPAPPAPAKPTPAPAPAPR-PTAEQPSEPRRPQPPAQPPSRP 260

Query: 190 CWRSSPLELSDRWRLSHDNGATVHPGRPRGHLRVWHSAAE-----------SSHSPVGPQ 336
             R  PL   +R  L         P  P+   R     A+               P GP 
Sbjct: 261 EKRGGPLIAPNRGGLQPTRPVPAQPA-PQTPTRSGSGIAKKGAITKAGSGSGGGRPGGPM 319

Query: 337 VQEVDRQGATQGPLCLCPVVARKTTVREERERSHV 441
            +  +R+ A         +++   +V++  +R HV
Sbjct: 320 RRRDEREAAVVDEQPKILLLSGNISVQDLAQRMHV 354



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>Q09578:COL75_CAEEL Putative cuticle collagen 75 - Caenorhabditis elegans|
          Length = 285

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 29/93 (31%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
 Frame = -2

Query: 1448 GIHPPPESCPGWPLCP--HDTCHRRGQTKLSQTGTPGSNNQLGSQGYCRLPG*GSACA*P 1275
            GI  PP   PGWP  P        RG T L   G PG     G  G+  LPG        
Sbjct: 142  GIDGPP-GIPGWPGEPGVRGMNGERGSTGLD--GAPGEPGSPGLPGFAGLPGSIGITGIK 198

Query: 1274 SVSGGIGERARYQTKSRLSYTGKCGCTDKPGQV 1176
             V G +GE            +G  G    PG +
Sbjct: 199  GVMGEVGEPGAPGIPGEEGLSGPTGQPGSPGSI 231



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>Q8K1I7:WIPF1_MOUSE WAS/WASL-interacting protein family member 1 - Mus musculus (Mouse)|
          Length = 493

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 22/57 (38%), Positives = 24/57 (42%)
 Frame = +1

Query: 10  PTPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSVPP 180
           P PPP  +G  P  +H       P   S P   STP   LGSQ      PP R  PP
Sbjct: 256 PPPPPPPVGNRP-SMHREAVPPPPSQTSKPPVPSTPRPGLGSQAPPPPPPPSRPGPP 311



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>P02465:CO1A2_BOVIN Collagen alpha-2(I) chain precursor - Bos taurus (Bovine)|
          Length = 1364

 Score = 34.3 bits (77), Expect = 2.3
 Identities = 21/60 (35%), Positives = 25/60 (41%)
 Frame = -2

Query: 1355 GTPGSNNQLGSQGYCRLPG*GSACA*PSVSGGIGERARYQTKSRLSYTGKCGCTDKPGQV 1176
            GTPG    LG+ G+  LPG       P V+G +GE         L   G  G    PG V
Sbjct: 857  GTPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGE------PGPLGIAGPPGARGPPGNV 910



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>Q80X19:COEA1_MOUSE Collagen alpha-1(XIV) chain precursor - Mus musculus (Mouse)|
          Length = 1797

 Score = 33.5 bits (75), Expect = 3.9
 Identities = 26/86 (30%), Positives = 35/86 (40%)
 Frame = -2

Query: 1439 PPPESCPGWPLCPHDTCHRRGQTKLSQTGTPGSNNQLGSQGYCRLPG*GSACA*PSVSGG 1260
            P  E+ P  P  P      +G + LS  G PG     G +G   LPG         V GG
Sbjct: 1491 PRGETGPAGPQGPPGP---QGPSGLSIQGMPGMPGDKGDKGDAGLPG------PQGVPGG 1541

Query: 1259 IGERARYQTKSRLSYTGKCGCTDKPG 1182
            +G   R  +  +  + GK G +  PG
Sbjct: 1542 VGSPGRDGSPGQRGFPGKDGSSGPPG 1567



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>Q12446:LAS17_YEAST Proline-rich protein LAS17 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 633

 Score = 33.5 bits (75), Expect = 3.9
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
 Frame = +1

Query: 7   SPTPPPINIGKSPL-------PIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPP 165
           +P PPP ++G+S +       PI    PST   A   P A  T   + G  P   A PPP
Sbjct: 469 APPPPPASLGQSQIPQSAPSAPIPPTLPSTTSAAPPPPPAFLTQQPQSGGAP---APPPP 525

Query: 166 RSVP 177
             +P
Sbjct: 526 PQMP 529



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>Q6YRJ4:Y020_ONYPE Putative ABC transporter ATP-binding protein PAM020 - Onion yellows|
            phytoplasma
          Length = 588

 Score = 33.1 bits (74), Expect = 5.0
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = -1

Query: 1608 VQYRGRGYSNRFDTLHRCALYTHHGAPSLMIPFVWTSVAPTKPASPMTLSSYHRHSSSPG 1429
            VQY    +SN+   L +CA+  +   P+ ++PF     AP  P   +   SYH  S  P 
Sbjct: 279  VQY----FSNQLTNLKKCAISQND--PTQLLPFFPKQFAPFCPILQLQNISYHYESKQPN 332

Query: 1428 VL 1423
            +L
Sbjct: 333  IL 334



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>Q9C5S0:AGP9_ARATH Classical arabinogalactan protein 9 precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 191

 Score = 33.1 bits (74), Expect = 5.0
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
 Frame = +1

Query: 13  TPPPIN----IGKSPLPIHGREPSTNPE--AKSIPVALSTPSLR--LGSQP*ELAEPPPR 168
           TPPP++    +  SP P+    P  NP     S P A   P+    + S P  +A PPP 
Sbjct: 44  TPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPA 103

Query: 169 SVPP 180
           + PP
Sbjct: 104 TPPP 107



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>Q46837:ACFD_ECOLI Putative lipoprotein acfD homolog precursor - Escherichia coli|
          Length = 1520

 Score = 33.1 bits (74), Expect = 5.0
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +1

Query: 1   GGSPTPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSVP 177
           G S   PP++ G   LP    +P+ NPE    P     P+      P    EP P  VP
Sbjct: 30  GSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPIPDPEPTPEPEPEPVP 88



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>P32018:COEA1_CHICK Collagen alpha-1(XIV) chain precursor - Gallus gallus (Chicken)|
          Length = 1888

 Score = 32.7 bits (73), Expect = 6.6
 Identities = 25/63 (39%), Positives = 28/63 (44%)
 Frame = -2

Query: 1439 PPPESCPGWPLCPHDTCHRRGQTKLSQTGTPGSNNQLGSQGYCRLPG*GSACA*PSVSGG 1260
            PP ES  G P  P  +   RG      TG PGS    G  GYC      S+CA   + GG
Sbjct: 1730 PPGESRTGSP-GPPGSPGPRGPA--GHTGPPGSQGPAGPPGYCD----PSSCAGYGMGGG 1782

Query: 1259 IGE 1251
             GE
Sbjct: 1783 YGE 1785



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>P34643:YOQ5_CAEEL Uncharacterized protein ZK512.5 - Caenorhabditis elegans|
          Length = 1232

 Score = 32.7 bits (73), Expect = 6.6
 Identities = 29/109 (26%), Positives = 47/109 (43%)
 Frame = +1

Query: 13   TPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSVPPWRSC 192
            TPPPI+  K+ +P         P   ++ + +   S  +   P    +P P   P   S 
Sbjct: 931  TPPPIS--KNVVPEMTPPAIVKPPMPTLSMPIPPVSTPIMVSP----QPIPIPKPVDASI 984

Query: 193  WRSSPLELSDRWRLSHDNGATVHPGRPRGHLRVWHSAAESSHSPVGPQV 339
             +S   EL D W  S  +  T +P  PR +++  +S A +  +P  P V
Sbjct: 985  AKSPRSELDDLWDTSPPSNQTSYPPAPR-NIQPSYSPAPNFANPTAPSV 1032



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>O10341:Y091_NPVOP Hypothetical 29.3 kDa protein - Orgyia pseudotsugata multicapsid|
           polyhedrosis virus (OpMNPV)
          Length = 279

 Score = 32.7 bits (73), Expect = 6.6
 Identities = 25/83 (30%), Positives = 28/83 (33%)
 Frame = +1

Query: 7   SPTPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSVPPWR 186
           SPTP P     +P P     P+ +P     P    TPS      P     PPP   PP  
Sbjct: 132 SPTPTP---SPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPPPSPTPP-- 186

Query: 187 SCWRSSPLELSDRWRLSHDNGAT 255
                SP  L D        G T
Sbjct: 187 ----PSPSPLGDPMYFPSSVGTT 205



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>P08123:CO1A2_HUMAN Collagen alpha-2(I) chain precursor - Homo sapiens (Human)|
          Length = 1366

 Score = 32.3 bits (72), Expect = 8.6
 Identities = 21/60 (35%), Positives = 24/60 (40%)
 Frame = -2

Query: 1355 GTPGSNNQLGSQGYCRLPG*GSACA*PSVSGGIGERARYQTKSRLSYTGKCGCTDKPGQV 1176
            GTPG    LG+ G   LPG       P V+G +GE         L   G  G    PG V
Sbjct: 859  GTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGE------PGPLGIAGPPGARGPPGAV 912



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>O46392:CO1A2_CANFA Collagen alpha-2(I) chain precursor - Canis familiaris (Dog)|
          Length = 1366

 Score = 32.3 bits (72), Expect = 8.6
 Identities = 21/60 (35%), Positives = 24/60 (40%)
 Frame = -2

Query: 1355 GTPGSNNQLGSQGYCRLPG*GSACA*PSVSGGIGERARYQTKSRLSYTGKCGCTDKPGQV 1176
            GTPG    LG+ G   LPG       P V+G +GE         L   G  G    PG V
Sbjct: 859  GTPGPQGLLGAPGILGLPGSRGERGLPGVAGSVGE------PGPLGIAGPPGARGPPGAV 912



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>O60184:YG49_SCHPO TPR repeat-containing protein C23E6.09 - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 1102

 Score = 32.3 bits (72), Expect = 8.6
 Identities = 42/192 (21%), Positives = 67/192 (34%), Gaps = 13/192 (6%)
 Frame = +1

Query: 7   SPTPPPINIGKSPLPIHGREPSTNPEAKSIPVAL-STPSLRLGSQP*ELAEPPPRSVPPW 183
           +P P P      P+P      +  P   + PV L +  S    +QP  +   P  +V P 
Sbjct: 241 APVPAPNQAALPPIPPQALPANGTPNTLASPVTLPAANSAVQNAQPVPMTSSPAMAVVPQ 300

Query: 184 RSCWRSSPLELSDRWRLSHDNGATVHPGRPRGHLRVWHSAAESSHSPVGPQVQEVDRQ-- 357
                +S         L+   GA V P      +R   S  E +   +G   +  D Q  
Sbjct: 301 NKTAATS--------TLAAQQGANVLPPNAPESVRHLISLNEETWIQIGRLAELFDDQDK 352

Query: 358 -------GATQGPLCLCPVVARKTTVREERERSHVGPHVIQSALTSPPADWD*WK---HI 507
                     Q P  + P + +  T+   RE+  +     Q+ L   P   + W    H 
Sbjct: 353 ALSAYESALRQNPYSI-PAMLQIATILRNREQFPLAIEYYQTILDCDPKQGEIWSALGHC 411

Query: 508 SKLRFPTSKAYS 543
             ++   S+AYS
Sbjct: 412 YLMQDDLSRAYS 423



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>Q00056:HXA4_HUMAN Homeobox protein Hox-A4 - Homo sapiens (Human)|
          Length = 320

 Score = 32.3 bits (72), Expect = 8.6
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +1

Query: 1   GGSPTPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP 141
           G +P  P +   KSPL + G+EP   P  K I V+   PS   G +P
Sbjct: 170 GSAPACPLLLADKSPLGLKGKEPVVYPWMKKIHVSAVNPSYN-GGEP 215


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 419,641,343
Number of extensions: 9939961
Number of successful extensions: 27717
Number of sequences better than 10.0: 17
Number of HSP's gapped: 27555
Number of HSP's successfully gapped: 17
Length of query: 746
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 625
Effective length of database: 67,496,744
Effective search space: 42185465000
Effective search space used: 42185465000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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