| Clone Name | FLbaf71k19 |
|---|---|
| Clone Library Name | barley_pub |
>O00401:WASL_HUMAN Neural Wiskott-Aldrich syndrome protein - Homo sapiens (Human)| Length = 505 Score = 35.8 bits (81), Expect = 0.78 Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Frame = +1 Query: 10 PTPPPINIGKSPLPIHGR-----EPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSV 174 P PPP N G P P GR PS P A P S PS+ + P PPP Sbjct: 290 PPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPA 349 Query: 175 PP 180 P Sbjct: 350 LP 351
>Q7NH85:IF2_GLOVI Translation initiation factor IF-2 - Gloeobacter violaceus| Length = 925 Score = 35.0 bits (79), Expect = 1.3 Identities = 38/155 (24%), Positives = 56/155 (36%), Gaps = 11/155 (7%) Frame = +1 Query: 10 PTPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSVPPWRS 189 PTP P ++P P+ R P+ AK P P QP E P P + PP R Sbjct: 204 PTPLPAPAAEAPQPV--RPPAPPAPAKPTPAPAPAPR-PTAEQPSEPRRPQPPAQPPSRP 260 Query: 190 CWRSSPLELSDRWRLSHDNGATVHPGRPRGHLRVWHSAAE-----------SSHSPVGPQ 336 R PL +R L P P+ R A+ P GP Sbjct: 261 EKRGGPLIAPNRGGLQPTRPVPAQPA-PQTPTRSGSGIAKKGAITKAGSGSGGGRPGGPM 319 Query: 337 VQEVDRQGATQGPLCLCPVVARKTTVREERERSHV 441 + +R+ A +++ +V++ +R HV Sbjct: 320 RRRDEREAAVVDEQPKILLLSGNISVQDLAQRMHV 354
>Q09578:COL75_CAEEL Putative cuticle collagen 75 - Caenorhabditis elegans| Length = 285 Score = 34.7 bits (78), Expect = 1.7 Identities = 29/93 (31%), Positives = 33/93 (35%), Gaps = 2/93 (2%) Frame = -2 Query: 1448 GIHPPPESCPGWPLCP--HDTCHRRGQTKLSQTGTPGSNNQLGSQGYCRLPG*GSACA*P 1275 GI PP PGWP P RG T L G PG G G+ LPG Sbjct: 142 GIDGPP-GIPGWPGEPGVRGMNGERGSTGLD--GAPGEPGSPGLPGFAGLPGSIGITGIK 198 Query: 1274 SVSGGIGERARYQTKSRLSYTGKCGCTDKPGQV 1176 V G +GE +G G PG + Sbjct: 199 GVMGEVGEPGAPGIPGEEGLSGPTGQPGSPGSI 231
>Q8K1I7:WIPF1_MOUSE WAS/WASL-interacting protein family member 1 - Mus musculus (Mouse)| Length = 493 Score = 34.7 bits (78), Expect = 1.7 Identities = 22/57 (38%), Positives = 24/57 (42%) Frame = +1 Query: 10 PTPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSVPP 180 P PPP +G P +H P S P STP LGSQ PP R PP Sbjct: 256 PPPPPPPVGNRP-SMHREAVPPPPSQTSKPPVPSTPRPGLGSQAPPPPPPPSRPGPP 311
>P02465:CO1A2_BOVIN Collagen alpha-2(I) chain precursor - Bos taurus (Bovine)| Length = 1364 Score = 34.3 bits (77), Expect = 2.3 Identities = 21/60 (35%), Positives = 25/60 (41%) Frame = -2 Query: 1355 GTPGSNNQLGSQGYCRLPG*GSACA*PSVSGGIGERARYQTKSRLSYTGKCGCTDKPGQV 1176 GTPG LG+ G+ LPG P V+G +GE L G G PG V Sbjct: 857 GTPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGE------PGPLGIAGPPGARGPPGNV 910
>Q80X19:COEA1_MOUSE Collagen alpha-1(XIV) chain precursor - Mus musculus (Mouse)| Length = 1797 Score = 33.5 bits (75), Expect = 3.9 Identities = 26/86 (30%), Positives = 35/86 (40%) Frame = -2 Query: 1439 PPPESCPGWPLCPHDTCHRRGQTKLSQTGTPGSNNQLGSQGYCRLPG*GSACA*PSVSGG 1260 P E+ P P P +G + LS G PG G +G LPG V GG Sbjct: 1491 PRGETGPAGPQGPPGP---QGPSGLSIQGMPGMPGDKGDKGDAGLPG------PQGVPGG 1541 Query: 1259 IGERARYQTKSRLSYTGKCGCTDKPG 1182 +G R + + + GK G + PG Sbjct: 1542 VGSPGRDGSPGQRGFPGKDGSSGPPG 1567
>Q12446:LAS17_YEAST Proline-rich protein LAS17 - Saccharomyces cerevisiae (Baker's| yeast) Length = 633 Score = 33.5 bits (75), Expect = 3.9 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 7/64 (10%) Frame = +1 Query: 7 SPTPPPINIGKSPL-------PIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPP 165 +P PPP ++G+S + PI PST A P A T + G P A PPP Sbjct: 469 APPPPPASLGQSQIPQSAPSAPIPPTLPSTTSAAPPPPPAFLTQQPQSGGAP---APPPP 525 Query: 166 RSVP 177 +P Sbjct: 526 PQMP 529
>Q6YRJ4:Y020_ONYPE Putative ABC transporter ATP-binding protein PAM020 - Onion yellows| phytoplasma Length = 588 Score = 33.1 bits (74), Expect = 5.0 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -1 Query: 1608 VQYRGRGYSNRFDTLHRCALYTHHGAPSLMIPFVWTSVAPTKPASPMTLSSYHRHSSSPG 1429 VQY +SN+ L +CA+ + P+ ++PF AP P + SYH S P Sbjct: 279 VQY----FSNQLTNLKKCAISQND--PTQLLPFFPKQFAPFCPILQLQNISYHYESKQPN 332 Query: 1428 VL 1423 +L Sbjct: 333 IL 334
>Q9C5S0:AGP9_ARATH Classical arabinogalactan protein 9 precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 191 Score = 33.1 bits (74), Expect = 5.0 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Frame = +1 Query: 13 TPPPIN----IGKSPLPIHGREPSTNPE--AKSIPVALSTPSLR--LGSQP*ELAEPPPR 168 TPPP++ + SP P+ P NP S P A P+ + S P +A PPP Sbjct: 44 TPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPA 103 Query: 169 SVPP 180 + PP Sbjct: 104 TPPP 107
>Q46837:ACFD_ECOLI Putative lipoprotein acfD homolog precursor - Escherichia coli| Length = 1520 Score = 33.1 bits (74), Expect = 5.0 Identities = 19/59 (32%), Positives = 24/59 (40%) Frame = +1 Query: 1 GGSPTPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSVP 177 G S PP++ G LP +P+ NPE P P+ P EP P VP Sbjct: 30 GSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPIPDPEPTPEPEPEPVP 88
>P32018:COEA1_CHICK Collagen alpha-1(XIV) chain precursor - Gallus gallus (Chicken)| Length = 1888 Score = 32.7 bits (73), Expect = 6.6 Identities = 25/63 (39%), Positives = 28/63 (44%) Frame = -2 Query: 1439 PPPESCPGWPLCPHDTCHRRGQTKLSQTGTPGSNNQLGSQGYCRLPG*GSACA*PSVSGG 1260 PP ES G P P + RG TG PGS G GYC S+CA + GG Sbjct: 1730 PPGESRTGSP-GPPGSPGPRGPA--GHTGPPGSQGPAGPPGYCD----PSSCAGYGMGGG 1782 Query: 1259 IGE 1251 GE Sbjct: 1783 YGE 1785
>P34643:YOQ5_CAEEL Uncharacterized protein ZK512.5 - Caenorhabditis elegans| Length = 1232 Score = 32.7 bits (73), Expect = 6.6 Identities = 29/109 (26%), Positives = 47/109 (43%) Frame = +1 Query: 13 TPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSVPPWRSC 192 TPPPI+ K+ +P P ++ + + S + P +P P P S Sbjct: 931 TPPPIS--KNVVPEMTPPAIVKPPMPTLSMPIPPVSTPIMVSP----QPIPIPKPVDASI 984 Query: 193 WRSSPLELSDRWRLSHDNGATVHPGRPRGHLRVWHSAAESSHSPVGPQV 339 +S EL D W S + T +P PR +++ +S A + +P P V Sbjct: 985 AKSPRSELDDLWDTSPPSNQTSYPPAPR-NIQPSYSPAPNFANPTAPSV 1032
>O10341:Y091_NPVOP Hypothetical 29.3 kDa protein - Orgyia pseudotsugata multicapsid| polyhedrosis virus (OpMNPV) Length = 279 Score = 32.7 bits (73), Expect = 6.6 Identities = 25/83 (30%), Positives = 28/83 (33%) Frame = +1 Query: 7 SPTPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP*ELAEPPPRSVPPWR 186 SPTP P +P P P+ +P P TPS P PPP PP Sbjct: 132 SPTPTP---SPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPPPSPTPP-- 186 Query: 187 SCWRSSPLELSDRWRLSHDNGAT 255 SP L D G T Sbjct: 187 ----PSPSPLGDPMYFPSSVGTT 205
>P08123:CO1A2_HUMAN Collagen alpha-2(I) chain precursor - Homo sapiens (Human)| Length = 1366 Score = 32.3 bits (72), Expect = 8.6 Identities = 21/60 (35%), Positives = 24/60 (40%) Frame = -2 Query: 1355 GTPGSNNQLGSQGYCRLPG*GSACA*PSVSGGIGERARYQTKSRLSYTGKCGCTDKPGQV 1176 GTPG LG+ G LPG P V+G +GE L G G PG V Sbjct: 859 GTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGE------PGPLGIAGPPGARGPPGAV 912
>O46392:CO1A2_CANFA Collagen alpha-2(I) chain precursor - Canis familiaris (Dog)| Length = 1366 Score = 32.3 bits (72), Expect = 8.6 Identities = 21/60 (35%), Positives = 24/60 (40%) Frame = -2 Query: 1355 GTPGSNNQLGSQGYCRLPG*GSACA*PSVSGGIGERARYQTKSRLSYTGKCGCTDKPGQV 1176 GTPG LG+ G LPG P V+G +GE L G G PG V Sbjct: 859 GTPGPQGLLGAPGILGLPGSRGERGLPGVAGSVGE------PGPLGIAGPPGARGPPGAV 912
>O60184:YG49_SCHPO TPR repeat-containing protein C23E6.09 - Schizosaccharomyces pombe| (Fission yeast) Length = 1102 Score = 32.3 bits (72), Expect = 8.6 Identities = 42/192 (21%), Positives = 67/192 (34%), Gaps = 13/192 (6%) Frame = +1 Query: 7 SPTPPPINIGKSPLPIHGREPSTNPEAKSIPVAL-STPSLRLGSQP*ELAEPPPRSVPPW 183 +P P P P+P + P + PV L + S +QP + P +V P Sbjct: 241 APVPAPNQAALPPIPPQALPANGTPNTLASPVTLPAANSAVQNAQPVPMTSSPAMAVVPQ 300 Query: 184 RSCWRSSPLELSDRWRLSHDNGATVHPGRPRGHLRVWHSAAESSHSPVGPQVQEVDRQ-- 357 +S L+ GA V P +R S E + +G + D Q Sbjct: 301 NKTAATS--------TLAAQQGANVLPPNAPESVRHLISLNEETWIQIGRLAELFDDQDK 352 Query: 358 -------GATQGPLCLCPVVARKTTVREERERSHVGPHVIQSALTSPPADWD*WK---HI 507 Q P + P + + T+ RE+ + Q+ L P + W H Sbjct: 353 ALSAYESALRQNPYSI-PAMLQIATILRNREQFPLAIEYYQTILDCDPKQGEIWSALGHC 411 Query: 508 SKLRFPTSKAYS 543 ++ S+AYS Sbjct: 412 YLMQDDLSRAYS 423
>Q00056:HXA4_HUMAN Homeobox protein Hox-A4 - Homo sapiens (Human)| Length = 320 Score = 32.3 bits (72), Expect = 8.6 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +1 Query: 1 GGSPTPPPINIGKSPLPIHGREPSTNPEAKSIPVALSTPSLRLGSQP 141 G +P P + KSPL + G+EP P K I V+ PS G +P Sbjct: 170 GSAPACPLLLADKSPLGLKGKEPVVYPWMKKIHVSAVNPSYN-GGEP 215 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 419,641,343 Number of extensions: 9939961 Number of successful extensions: 27717 Number of sequences better than 10.0: 17 Number of HSP's gapped: 27555 Number of HSP's successfully gapped: 17 Length of query: 746 Length of database: 100,686,439 Length adjustment: 121 Effective length of query: 625 Effective length of database: 67,496,744 Effective search space: 42185465000 Effective search space used: 42185465000 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)