ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf74n09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001052797.1| Oryza sativa (japonica cultivar-group) Os02g0208900 (Os02g0208900) mRNA, complete cds Length = 2959 Score = 718 bits (362), Expect = 0.0 Identities = 551/614 (89%) Strand = Plus / Plus Query: 145 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 204 ||||||||||||| || | ||||||||||||| |||||||||| | |||||||||||||| Sbjct: 224 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 283 Query: 205 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtatg 264 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 284 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtctg 343 Query: 265 cacaaatttctggaccttcgtttgtaccaattgcagtggagcacaccgagagttcacgca 324 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 344 tacaaatttctggaccttcatttgtaccaattgcagtggagcacaccgagagttcacgca 403 Query: 325 ccgggtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaagg 384 || | ||| || ||||| |||||||||||||||||||| ||||| | ||| || |||| Sbjct: 404 tcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaaga 463 Query: 385 aggaggaaatgagcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatcc 444 |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| | Sbjct: 464 aggaggaaatgagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattc 523 Query: 445 ataccctgacagcagtaatacggacaaattgaggaatttcatcaaatatgtttacgtgga 504 | |||||||||||||||| |||| ||||||||||| || || || ||||||| ||||| Sbjct: 524 tttccctgacagcagtaatgcggataaattgaggaactttattaagcatgtttatgtgga 583 Query: 505 acggcgatatacaggagaaagaagctctgatagaccaccgaggggaaaggacgataagga 564 |||| |||| |||||||||||||| | ||| | ||||||||||||||||| |||||||| Sbjct: 584 acggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggatgataagga 643 Query: 565 tgaacatagcgaaaatagaagatctgatggaaatcggggtggttcaagaagtccaccata 624 ||| |||| ||||| || ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 644 tgagtatagtgaaaacaggagatctgatggaaattggggtggttcaagaagtccgccata 703 Query: 625 taatgaaagttactctgaccgtcggagttatagtggacggagtgatgacagaaattccag 684 |||||||| || ||||| ||||| |||||||||||| |||| ||||||||||||||||| Sbjct: 704 caatgaaagctattctgatcgtcgcagttatagtggaaggagcgatgacagaaattccag 763 Query: 685 acattcctatggagaacgtagtcctggctatgaccagaatgattataagaaaagcccccg 744 | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 764 atattcctatggagaacgaagtcctggctatgaacataatgattataagaaaagcccccg 823 Query: 745 ccactttgaagttg 758 | |||||||||||| Sbjct: 824 ctactttgaagttg 837 Score = 190 bits (96), Expect = 2e-44 Identities = 188/218 (86%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 764 gatagatctgggaaaacaactccagttcaaaggttcgaggaccgcaggttttctgaacca 823 ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct: 855 gatagatctggaaaaacaactccagttcaacggtttgaggaccgcaggccttctgaacca 914 Query: 824 cgaaagccagagactgggtctccaaattaccagagagaagccaatggatctagtcctcct 883 | | |||||| | |||||||||||||||||||| ||| || |||||||||| ||| Sbjct: 915 cagaggccagataatgggtctccaaattaccagaaggaaaccgatggatctag---ccct 971 Query: 884 gttgtacggccagtgagggagatattgggtgatgatgctcctcaacttcggattggtgaa 943 |||||||||||||||||||| ||| |||||||| |||| |||||||| ||| ||||||| Sbjct: 972 gttgtacggccagtgagggatatactgggtgataatgcacctcaactacgggttggtgag 1031 Query: 944 cctccaaagccgaatgtagccagaccgattgaccctcc 981 ||||| ||||| |||||||| ||| ||||||| ||||| Sbjct: 1032 cctcctaagccaaatgtagcgagaacgattgatcctcc 1069 Score = 99.6 bits (50), Expect = 6e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 2710 tgatcaacaagctgcccctaggtactcccagccaagcaccccaccttcatatggtgctgt 2769 ||||||||||||||| || |||||| |||||||||||||||||||||| ||||| |||| Sbjct: 2333 tgatcaacaagctgctcccaggtacccccagccaagcaccccaccttcctatggctctgt 2392 Query: 2770 cggtggaaatccttttgggtaa 2791 || |||||||||||||||||| Sbjct: 2393 tgggggaaatccttttgggtaa 2414 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 971 attgaccctccaaaaccaaatggagccaggaccattgaacctccacctcaggcacagagg 1030 ||||| ||||||| |||||||||| |||| ||||| ||||||||||| ||| |||||| Sbjct: 1131 attgatcctccaagaccaaatggaaccagaaccatcgaacctccaccacagatgcagagg 1190 Query: 1031 acatctactgccagcagcattggttcttccgagggga 1067 ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1191 acatcaactgccagcagtattggttcttcagagggga 1227 Score = 91.7 bits (46), Expect = 1e-14 Identities = 73/82 (89%) Strand = Plus / Plus Query: 1904 cagcaaaatgcatatccccaacctgcgaaagcttcaaacccttttgacctcggaaatgag 1963 |||||| ||||||| ||||||||||||||||| ||||| |||||||| || || |||||| Sbjct: 2022 cagcaacatgcatacccccaacctgcgaaagcatcaaatccttttgatcttgggaatgag 2081 Query: 1964 gcagctccaattcaagctcaca 1985 |||||||| |||||||||||| Sbjct: 2082 ccagctccagttcaagctcaca 2103 Score = 89.7 bits (45), Expect = 6e-14 Identities = 101/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 1262 ggtgattgggcatcttttgatgcttttggccagcaacaacaaacaccacaatcaggcagc 1321 ||||| |||||||| |||||| |||| |||||||||| ||||||||||| | |||| Sbjct: 1437 ggtgactgggcatcgtttgattctttcggccagcaac---aaacaccacaaactggcaat 1493 Query: 1322 actgtaaatccgcttgagtctgtgcttgcacaactatcattctctgaaacaccctctgc 1380 | |||| |||| |||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 1494 agtgtagatccccttgagtctgcacttgctcaactatcattttctgaaacaccctctgc 1552 Score = 67.9 bits (34), Expect = 2e-07 Identities = 73/86 (84%) Strand = Plus / Plus Query: 1454 tcacattcttcattatttggtccacccgttggaatctcaggcaatcaggcctcaacagga 1513 |||||||||||||| |||||| ||||| |||| ||||||| | ||||||||||||||| Sbjct: 1632 tcacattcttcattttttggtgcaccccctggagtctcaggtcaccaggcctcaacagga 1691 Query: 1514 atgcccgtccaaggatctgcagttca 1539 ||| | |||| |||||| ||||||| Sbjct: 1692 atgtctatccatggatcttcagttca 1717 Score = 52.0 bits (26), Expect = 0.013 Identities = 55/64 (85%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 2221 cattacatgatgcagcatgtttcaaacaacatgcctgagcagctacctaatggcatgctt 2280 ||||||||||||||||| ||| |||||| || |||||||| |||||||| ||||||| Sbjct: 2235 cattacatgatgcagcaagttccaaaca---tgtctgagcagttacctaataccatgctt 2291 Query: 2281 ccaa 2284 |||| Sbjct: 2292 ccaa 2295 Score = 48.1 bits (24), Expect = 0.20 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1783 gggaatgcagtcatatcctcaggcagcattttctcaacctacatatcaacagcctacata 1842 ||||||||| ||||||||||| |||||| |||||||| |||||||||| ||| ||| Sbjct: 1955 gggaatgcaagcatatcctcagatggcatttgctcaacctgcatatcaacaacctgtata 2014 Query: 1843 tcagcaac 1850 || ||||| Sbjct: 2015 tccgcaac 2022
>dbj|AK121183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084M01, full insert sequence Length = 2961 Score = 718 bits (362), Expect = 0.0 Identities = 551/614 (89%) Strand = Plus / Plus Query: 145 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 204 ||||||||||||| || | ||||||||||||| |||||||||| | |||||||||||||| Sbjct: 226 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 285 Query: 205 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtatg 264 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 286 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtctg 345 Query: 265 cacaaatttctggaccttcgtttgtaccaattgcagtggagcacaccgagagttcacgca 324 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 346 tacaaatttctggaccttcatttgtaccaattgcagtggagcacaccgagagttcacgca 405 Query: 325 ccgggtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaagg 384 || | ||| || ||||| |||||||||||||||||||| ||||| | ||| || |||| Sbjct: 406 tcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaaga 465 Query: 385 aggaggaaatgagcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatcc 444 |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| | Sbjct: 466 aggaggaaatgagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattc 525 Query: 445 ataccctgacagcagtaatacggacaaattgaggaatttcatcaaatatgtttacgtgga 504 | |||||||||||||||| |||| ||||||||||| || || || ||||||| ||||| Sbjct: 526 tttccctgacagcagtaatgcggataaattgaggaactttattaagcatgtttatgtgga 585 Query: 505 acggcgatatacaggagaaagaagctctgatagaccaccgaggggaaaggacgataagga 564 |||| |||| |||||||||||||| | ||| | ||||||||||||||||| |||||||| Sbjct: 586 acggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggatgataagga 645 Query: 565 tgaacatagcgaaaatagaagatctgatggaaatcggggtggttcaagaagtccaccata 624 ||| |||| ||||| || ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 646 tgagtatagtgaaaacaggagatctgatggaaattggggtggttcaagaagtccgccata 705 Query: 625 taatgaaagttactctgaccgtcggagttatagtggacggagtgatgacagaaattccag 684 |||||||| || ||||| ||||| |||||||||||| |||| ||||||||||||||||| Sbjct: 706 caatgaaagctattctgatcgtcgcagttatagtggaaggagcgatgacagaaattccag 765 Query: 685 acattcctatggagaacgtagtcctggctatgaccagaatgattataagaaaagcccccg 744 | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 766 atattcctatggagaacgaagtcctggctatgaacataatgattataagaaaagcccccg 825 Query: 745 ccactttgaagttg 758 | |||||||||||| Sbjct: 826 ctactttgaagttg 839 Score = 190 bits (96), Expect = 2e-44 Identities = 188/218 (86%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 764 gatagatctgggaaaacaactccagttcaaaggttcgaggaccgcaggttttctgaacca 823 ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct: 857 gatagatctggaaaaacaactccagttcaacggtttgaggaccgcaggccttctgaacca 916 Query: 824 cgaaagccagagactgggtctccaaattaccagagagaagccaatggatctagtcctcct 883 | | |||||| | |||||||||||||||||||| ||| || |||||||||| ||| Sbjct: 917 cagaggccagataatgggtctccaaattaccagaaggaaaccgatggatctag---ccct 973 Query: 884 gttgtacggccagtgagggagatattgggtgatgatgctcctcaacttcggattggtgaa 943 |||||||||||||||||||| ||| |||||||| |||| |||||||| ||| ||||||| Sbjct: 974 gttgtacggccagtgagggatatactgggtgataatgcacctcaactacgggttggtgag 1033 Query: 944 cctccaaagccgaatgtagccagaccgattgaccctcc 981 ||||| ||||| |||||||| ||| ||||||| ||||| Sbjct: 1034 cctcctaagccaaatgtagcgagaacgattgatcctcc 1071 Score = 99.6 bits (50), Expect = 6e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 2710 tgatcaacaagctgcccctaggtactcccagccaagcaccccaccttcatatggtgctgt 2769 ||||||||||||||| || |||||| |||||||||||||||||||||| ||||| |||| Sbjct: 2335 tgatcaacaagctgctcccaggtacccccagccaagcaccccaccttcctatggctctgt 2394 Query: 2770 cggtggaaatccttttgggtaa 2791 || |||||||||||||||||| Sbjct: 2395 tgggggaaatccttttgggtaa 2416 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 971 attgaccctccaaaaccaaatggagccaggaccattgaacctccacctcaggcacagagg 1030 ||||| ||||||| |||||||||| |||| ||||| ||||||||||| ||| |||||| Sbjct: 1133 attgatcctccaagaccaaatggaaccagaaccatcgaacctccaccacagatgcagagg 1192 Query: 1031 acatctactgccagcagcattggttcttccgagggga 1067 ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1193 acatcaactgccagcagtattggttcttcagagggga 1229 Score = 91.7 bits (46), Expect = 1e-14 Identities = 73/82 (89%) Strand = Plus / Plus Query: 1904 cagcaaaatgcatatccccaacctgcgaaagcttcaaacccttttgacctcggaaatgag 1963 |||||| ||||||| ||||||||||||||||| ||||| |||||||| || || |||||| Sbjct: 2024 cagcaacatgcatacccccaacctgcgaaagcatcaaatccttttgatcttgggaatgag 2083 Query: 1964 gcagctccaattcaagctcaca 1985 |||||||| |||||||||||| Sbjct: 2084 ccagctccagttcaagctcaca 2105 Score = 89.7 bits (45), Expect = 6e-14 Identities = 101/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 1262 ggtgattgggcatcttttgatgcttttggccagcaacaacaaacaccacaatcaggcagc 1321 ||||| |||||||| |||||| |||| |||||||||| ||||||||||| | |||| Sbjct: 1439 ggtgactgggcatcgtttgattctttcggccagcaac---aaacaccacaaactggcaat 1495 Query: 1322 actgtaaatccgcttgagtctgtgcttgcacaactatcattctctgaaacaccctctgc 1380 | |||| |||| |||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 1496 agtgtagatccccttgagtctgcacttgctcaactatcattttctgaaacaccctctgc 1554 Score = 67.9 bits (34), Expect = 2e-07 Identities = 73/86 (84%) Strand = Plus / Plus Query: 1454 tcacattcttcattatttggtccacccgttggaatctcaggcaatcaggcctcaacagga 1513 |||||||||||||| |||||| ||||| |||| ||||||| | ||||||||||||||| Sbjct: 1634 tcacattcttcattttttggtgcaccccctggagtctcaggtcaccaggcctcaacagga 1693 Query: 1514 atgcccgtccaaggatctgcagttca 1539 ||| | |||| |||||| ||||||| Sbjct: 1694 atgtctatccatggatcttcagttca 1719 Score = 52.0 bits (26), Expect = 0.013 Identities = 55/64 (85%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 2221 cattacatgatgcagcatgtttcaaacaacatgcctgagcagctacctaatggcatgctt 2280 ||||||||||||||||| ||| |||||| || |||||||| |||||||| ||||||| Sbjct: 2237 cattacatgatgcagcaagttccaaaca---tgtctgagcagttacctaataccatgctt 2293 Query: 2281 ccaa 2284 |||| Sbjct: 2294 ccaa 2297 Score = 48.1 bits (24), Expect = 0.20 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1783 gggaatgcagtcatatcctcaggcagcattttctcaacctacatatcaacagcctacata 1842 ||||||||| ||||||||||| |||||| |||||||| |||||||||| ||| ||| Sbjct: 1957 gggaatgcaagcatatcctcagatggcatttgctcaacctgcatatcaacaacctgtata 2016 Query: 1843 tcagcaac 1850 || ||||| Sbjct: 2017 tccgcaac 2024
>dbj|AK070031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038F08, full insert sequence Length = 1986 Score = 710 bits (358), Expect = 0.0 Identities = 550/614 (89%) Strand = Plus / Plus Query: 145 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 204 ||||||||||||| || | ||||||||||||| |||||||||| | |||||||||||||| Sbjct: 190 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 249 Query: 205 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtatg 264 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 250 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtctg 309 Query: 265 cacaaatttctggaccttcgtttgtaccaattgcagtggagcacaccgagagttcacgca 324 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 310 tacaaatttctggaccttcatttgtaccaattgcagtggagcacaccgagagttcacgca 369 Query: 325 ccgggtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaagg 384 || | ||| || ||||| |||||||||||||||||||| ||||| | ||| || |||| Sbjct: 370 tcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaaga 429 Query: 385 aggaggaaatgagcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatcc 444 |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| | Sbjct: 430 aggaggaaatgagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattc 489 Query: 445 ataccctgacagcagtaatacggacaaattgaggaatttcatcaaatatgtttacgtgga 504 | |||||||||||||||| |||| ||||||||||| || || || ||||||| ||||| Sbjct: 490 tttccctgacagcagtaatgcggataaattgaggaactttattaagcatgtttatgtgga 549 Query: 505 acggcgatatacaggagaaagaagctctgatagaccaccgaggggaaaggacgataagga 564 |||| |||| |||||||||||||| | ||| | ||||||||||||||||| |||||||| Sbjct: 550 acggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggatgataagga 609 Query: 565 tgaacatagcgaaaatagaagatctgatggaaatcggggtggttcaagaagtccaccata 624 ||| |||| ||||| || ||||||||||||||| ||||||||||||| ||||| ||||| Sbjct: 610 tgagtatagtgaaaacaggagatctgatggaaattggggtggttcaaggagtccgccata 669 Query: 625 taatgaaagttactctgaccgtcggagttatagtggacggagtgatgacagaaattccag 684 |||||||| || ||||| ||||| |||||||||||| |||| ||||||||||||||||| Sbjct: 670 caatgaaagctattctgatcgtcgcagttatagtggaaggagcgatgacagaaattccag 729 Query: 685 acattcctatggagaacgtagtcctggctatgaccagaatgattataagaaaagcccccg 744 | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 730 atattcctatggagaacgaagtcctggctatgaacataatgattataagaaaagcccccg 789 Query: 745 ccactttgaagttg 758 | |||||||||||| Sbjct: 790 ctactttgaagttg 803 Score = 190 bits (96), Expect = 2e-44 Identities = 188/218 (86%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 764 gatagatctgggaaaacaactccagttcaaaggttcgaggaccgcaggttttctgaacca 823 ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct: 821 gatagatctggaaaaacaactccagttcaacggtttgaggaccgcaggccttctgaacca 880 Query: 824 cgaaagccagagactgggtctccaaattaccagagagaagccaatggatctagtcctcct 883 | | |||||| | |||||||||||||||||||| ||| || |||||||||| ||| Sbjct: 881 cagaggccagataatgggtctccaaattaccagaaggaaaccgatggatctag---ccct 937 Query: 884 gttgtacggccagtgagggagatattgggtgatgatgctcctcaacttcggattggtgaa 943 |||||||||||||||||||| ||| |||||||| |||| |||||||| ||| ||||||| Sbjct: 938 gttgtacggccagtgagggatatactgggtgataatgcacctcaactacgggttggtgag 997 Query: 944 cctccaaagccgaatgtagccagaccgattgaccctcc 981 ||||| ||||| |||||||| ||| ||||||| ||||| Sbjct: 998 cctcctaagccaaatgtagcgagaacgattgatcctcc 1035 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 971 attgaccctccaaaaccaaatggagccaggaccattgaacctccacctcaggcacagagg 1030 ||||| ||||||| |||||||||| |||| ||||| ||||||||||| ||| |||||| Sbjct: 1097 attgatcctccaagaccaaatggaaccagaaccatcgaacctccaccacagatgcagagg 1156 Query: 1031 acatctactgccagcagcattggttcttccgagggga 1067 ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1157 acatcaactgccagcagtattggttcttcagagggga 1193 Score = 89.7 bits (45), Expect = 6e-14 Identities = 101/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 1262 ggtgattgggcatcttttgatgcttttggccagcaacaacaaacaccacaatcaggcagc 1321 ||||| |||||||| |||||| |||| |||||||||| ||||||||||| | |||| Sbjct: 1403 ggtgactgggcatcgtttgattctttcggccagcaac---aaacaccacaaactggcaat 1459 Query: 1322 actgtaaatccgcttgagtctgtgcttgcacaactatcattctctgaaacaccctctgc 1380 | |||| |||| |||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 1460 agtgtagatccccttgagtctgcacttgctcaactatcattttctgaaacaccctctgc 1518 Score = 54.0 bits (27), Expect = 0.003 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 1454 tcacattcttcattattt-ggtccacccgttggaatctcaggcaatcaggcctcaacagg 1512 |||||||||||||| ||| ||| ||||| |||| ||||||| | |||||||||||||| Sbjct: 1598 tcacattcttcatttttttggtgcaccccctggagtctcaggtcaccaggcctcaacagg 1657 Query: 1513 aatgcccgtccaaggatctgcagttca 1539 |||| | |||| |||||| ||||||| Sbjct: 1658 aatgtctatccatggatcttcagttca 1684 Score = 46.1 bits (23), Expect = 0.79 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1783 gggaatgcagtcatatcctcaggcagcattttctcaacctacatatcaaca 1833 ||||||||| ||||||||||| |||||| |||||||| |||||||||| Sbjct: 1922 gggaatgcaagcatatcctcagatggcatttgctcaacctgcatatcaaca 1972
>dbj|AK066171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055F05, full insert sequence Length = 3068 Score = 710 bits (358), Expect = 0.0 Identities = 550/614 (89%) Strand = Plus / Plus Query: 145 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 204 ||||||||||||| || | ||||||||||||| |||||||||| | |||||||||||||| Sbjct: 190 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 249 Query: 205 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtatg 264 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 250 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtctg 309 Query: 265 cacaaatttctggaccttcgtttgtaccaattgcagtggagcacaccgagagttcacgca 324 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 310 tacaaatttctggaccttcatttgtaccaattgcagtggagcacaccgagagttcacgca 369 Query: 325 ccgggtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaagg 384 || | ||| || ||||| |||||||||||||||||||| ||||| | ||| || |||| Sbjct: 370 tcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaaga 429 Query: 385 aggaggaaatgagcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatcc 444 |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| | Sbjct: 430 aggaggaaatgagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattc 489 Query: 445 ataccctgacagcagtaatacggacaaattgaggaatttcatcaaatatgtttacgtgga 504 | |||||||||||||||| |||| ||||||||||| || || || ||||||| ||||| Sbjct: 490 tttccctgacagcagtaatgcggataaattgaggaactttattaagcatgtttatgtgga 549 Query: 505 acggcgatatacaggagaaagaagctctgatagaccaccgaggggaaaggacgataagga 564 |||| |||| |||||||||||||| | ||| | ||||||||||||||||| |||||||| Sbjct: 550 acggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggatgataagga 609 Query: 565 tgaacatagcgaaaatagaagatctgatggaaatcggggtggttcaagaagtccaccata 624 ||| |||| ||||| || ||||||||| ||||| ||||||||||||||||||| ||||| Sbjct: 610 tgagtatagtgaaaacaggagatctgattgaaattggggtggttcaagaagtccgccata 669 Query: 625 taatgaaagttactctgaccgtcggagttatagtggacggagtgatgacagaaattccag 684 |||||||| || ||||| ||||| |||||||||||| |||| ||||||||||||||||| Sbjct: 670 caatgaaagctattctgatcgtcgcagttatagtggaaggagcgatgacagaaattccag 729 Query: 685 acattcctatggagaacgtagtcctggctatgaccagaatgattataagaaaagcccccg 744 | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 730 atattcctatggagaacgaagtcctggctatgaacataatgattataagaaaagcccccg 789 Query: 745 ccactttgaagttg 758 | |||||||||||| Sbjct: 790 ctactttgaagttg 803 Score = 190 bits (96), Expect = 2e-44 Identities = 188/218 (86%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 764 gatagatctgggaaaacaactccagttcaaaggttcgaggaccgcaggttttctgaacca 823 ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct: 821 gatagatctggaaaaacaactccagttcaacggtttgaggaccgcaggccttctgaacca 880 Query: 824 cgaaagccagagactgggtctccaaattaccagagagaagccaatggatctagtcctcct 883 | | |||||| | |||||||||||||||||||| ||| || |||||||||| ||| Sbjct: 881 cagaggccagataatgggtctccaaattaccagaaggaaaccgatggatctag---ccct 937 Query: 884 gttgtacggccagtgagggagatattgggtgatgatgctcctcaacttcggattggtgaa 943 |||||||||||||||||||| ||| |||||||| |||| |||||||| ||| ||||||| Sbjct: 938 gttgtacggccagtgagggatatactgggtgataatgcacctcaactacgggttggtgag 997 Query: 944 cctccaaagccgaatgtagccagaccgattgaccctcc 981 ||||| ||||| |||||||| ||| ||||||| ||||| Sbjct: 998 cctcctaagccaaatgtagcgagaacgattgatcctcc 1035 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 971 attgaccctccaaaaccaaatggagccaggaccattgaacctccacctcaggcacagagg 1030 ||||| ||||||| |||||||||| |||| ||||| ||||||||||| ||| |||||| Sbjct: 1097 attgatcctccaagaccaaatggaaccagaaccatcgaacctccaccacagatgcagagg 1156 Query: 1031 acatctactgccagcagcattggttcttccgagggga 1067 ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1157 acatcaactgccagcagtattggttcttcagagggga 1193 Score = 89.7 bits (45), Expect = 6e-14 Identities = 101/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 1262 ggtgattgggcatcttttgatgcttttggccagcaacaacaaacaccacaatcaggcagc 1321 ||||| |||||||| |||||| |||| |||||||||| ||||||||||| | |||| Sbjct: 1403 ggtgactgggcatcgtttgattctttcggccagcaac---aaacaccacaaactggcaat 1459 Query: 1322 actgtaaatccgcttgagtctgtgcttgcacaactatcattctctgaaacaccctctgc 1380 | |||| |||| |||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 1460 agtgtagatccccttgagtctgcacttgctcaactatcattttctgaaacaccctctgc 1518 Score = 67.9 bits (34), Expect = 2e-07 Identities = 73/86 (84%) Strand = Plus / Plus Query: 1454 tcacattcttcattatttggtccacccgttggaatctcaggcaatcaggcctcaacagga 1513 |||||||||||||| |||||| ||||| |||| ||||||| | ||||||||||||||| Sbjct: 1598 tcacattcttcattttttggtgcaccccctggagtctcaggtcaccaggcctcaacagga 1657 Query: 1514 atgcccgtccaaggatctgcagttca 1539 ||| | |||| |||||| ||||||| Sbjct: 1658 atgtctatccatggatcttcagttca 1683
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 252 bits (127), Expect = 7e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 552 aggacgataaggatgaacatagcgaaaatagaagatctgatggaaatcggggtggttcaa 611 |||| ||||||||||| |||| ||||| || ||||||||||||||| |||||||||||| Sbjct: 6112671 aggatgataaggatgagtatagtgaaaacaggagatctgatggaaattggggtggttcaa 6112730 Query: 612 gaagtccaccatataatgaaagttactctgaccgtcggagttatagtggacggagtgatg 671 ||||||| ||||| |||||||| || ||||| ||||| |||||||||||| |||| |||| Sbjct: 6112731 gaagtccgccatacaatgaaagctattctgatcgtcgcagttatagtggaaggagcgatg 6112790 Query: 672 acagaaattccagacattcctatggagaacgtagtcctggctatgaccagaatgattata 731 |||||||||||||| |||||||||||||||| |||||||||||||| || |||||||||| Sbjct: 6112791 acagaaattccagatattcctatggagaacgaagtcctggctatgaacataatgattata 6112850 Query: 732 agaaaagcccccgccactttgaagttg 758 |||||||||||||| |||||||||||| Sbjct: 6112851 agaaaagcccccgctactttgaagttg 6112877 Score = 190 bits (96), Expect = 2e-44 Identities = 188/218 (86%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 764 gatagatctgggaaaacaactccagttcaaaggttcgaggaccgcaggttttctgaacca 823 ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct: 6112895 gatagatctggaaaaacaactccagttcaacggtttgaggaccgcaggccttctgaacca 6112954 Query: 824 cgaaagccagagactgggtctccaaattaccagagagaagccaatggatctagtcctcct 883 | | |||||| | |||||||||||||||||||| ||| || |||||||||| ||| Sbjct: 6112955 cagaggccagataatgggtctccaaattaccagaaggaaaccgatggatctag---ccct 6113011 Query: 884 gttgtacggccagtgagggagatattgggtgatgatgctcctcaacttcggattggtgaa 943 |||||||||||||||||||| ||| |||||||| |||| |||||||| ||| ||||||| Sbjct: 6113012 gttgtacggccagtgagggatatactgggtgataatgcacctcaactacgggttggtgag 6113071 Query: 944 cctccaaagccgaatgtagccagaccgattgaccctcc 981 ||||| ||||| |||||||| ||| ||||||| ||||| Sbjct: 6113072 cctcctaagccaaatgtagcgagaacgattgatcctcc 6113109 Score = 151 bits (76), Expect = 2e-32 Identities = 97/104 (93%) Strand = Plus / Plus Query: 145 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 204 ||||||||||||| || | ||||||||||||| |||||||||| | |||||||||||||| Sbjct: 6109548 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 6109607 Query: 205 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgg 248 |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 6109608 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgg 6109651 Score = 103 bits (52), Expect = 4e-18 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2660 ttgtgacatcacaggcaacaaggaggggctggttccctcggcgtcggatatgatcaacaa 2719 ||||| ||| |||||||||||||||| ||||||||| | | || | |||||||||| Sbjct: 6117133 ttgtggcattacaggcaacaaggaggtttgggttccctcaacatgggctttgatcaacaa 6117192 Query: 2720 gctgcccctaggtactcccagccaagcaccccaccttcatatggtgctgtcggtggaaat 2779 ||||| || |||||| |||||||||||||||||||||| ||||| |||| || |||||| Sbjct: 6117193 gctgctcccaggtacccccagccaagcaccccaccttcctatggctctgttgggggaaat 6117252 Query: 2780 ccttttgggtaa 2791 |||||||||||| Sbjct: 6117253 ccttttgggtaa 6117264 Score = 101 bits (51), Expect = 2e-17 Identities = 60/63 (95%) Strand = Plus / Plus Query: 247 gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagc 306 ||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||| Sbjct: 6111936 gggaccacaatatgtctgtacaaatttctggaccttcatttgtaccaattgcagtggagc 6111995 Query: 307 aca 309 ||| Sbjct: 6111996 aca 6111998 Score = 91.7 bits (46), Expect = 1e-14 Identities = 73/82 (89%) Strand = Plus / Plus Query: 1904 cagcaaaatgcatatccccaacctgcgaaagcttcaaacccttttgacctcggaaatgag 1963 |||||| ||||||| ||||||||||||||||| ||||| |||||||| || || |||||| Sbjct: 6115969 cagcaacatgcatacccccaacctgcgaaagcatcaaatccttttgatcttgggaatgag 6116028 Query: 1964 gcagctccaattcaagctcaca 1985 |||||||| |||||||||||| Sbjct: 6116029 ccagctccagttcaagctcaca 6116050 Score = 89.7 bits (45), Expect = 6e-14 Identities = 101/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 1262 ggtgattgggcatcttttgatgcttttggccagcaacaacaaacaccacaatcaggcagc 1321 ||||| |||||||| |||||| |||| |||||||||| ||||||||||| | |||| Sbjct: 6113628 ggtgactgggcatcgtttgattctttcggccagcaac---aaacaccacaaactggcaat 6113684 Query: 1322 actgtaaatccgcttgagtctgtgcttgcacaactatcattctctgaaacaccctctgc 1380 | |||| |||| |||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 6113685 agtgtagatccccttgagtctgcacttgctcaactatcattttctgaaacaccctctgc 6113743 Score = 87.7 bits (44), Expect = 2e-13 Identities = 82/94 (87%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 2197 ctaatttgtgattcaacttcagaccattacatgatgcagcatgtttcaaacaacatgcct 2256 |||||||||| |||||||||||| ||||||||||||||||| ||| || |||||| || Sbjct: 6116563 ctaatttgtggttcaacttcagatcattacatgatgcagcaagttcca---aacatgtct 6116619 Query: 2257 gagcagctacctaatggcatgcttccaaggtgag 2290 |||||| |||||||| ||||||||||| ||||| Sbjct: 6116620 gagcagttacctaataccatgcttccaatgtgag 6116653 Score = 79.8 bits (40), Expect = 6e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 310 ccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaagt 369 ||||||||||||||| || | ||| || ||||| |||||||||||||||||||| ||||| Sbjct: 6112144 ccgagagttcacgcatcgagcgaagtcagtttctatggctaaatttactgcacaggaagt 6112203 Query: 370 cactgctctacaaggaggaggaaatgag 397 | ||| || |||| ||||||||||||| Sbjct: 6112204 tagtgcccttcaagaaggaggaaatgag 6112231 Score = 79.8 bits (40), Expect = 6e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 396 agcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatccataccctgaca 455 ||||||||||||||||||| ||||||||||||||| |||| |||||| | | |||||||| Sbjct: 6112313 agcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattctttccctgaca 6112372 Query: 456 gcag 459 |||| Sbjct: 6112373 gcag 6112376 Score = 75.8 bits (38), Expect = 9e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 457 cagtaatacggacaaattgaggaatttcatcaaatatgtttacgtggaacggcgatatac 516 ||||||| |||| ||||||||||| || || || ||||||| ||||||||| |||| || Sbjct: 6112460 cagtaatgcggataaattgaggaactttattaagcatgtttatgtggaacggagatacac 6112519 Query: 517 aggagaaagaagctctgatagaccaccgaggggaaagg 554 |||||||||||| | ||| | |||||||||||||||| Sbjct: 6112520 aggagaaagaagtgcagatcggccaccgaggggaaagg 6112557 Score = 60.0 bits (30), Expect = 5e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 1026 agaggacatctactgccagcagcattggttcttccgagggga 1067 |||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 6113377 agaggacatcaactgccagcagtattggttcttcagagggga 6113418 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Plus Query: 971 attgaccctccaaaaccaaatggagccaggaccattgaacctccacc 1017 ||||| ||||||| |||||||||| |||| ||||| ||||||||||| Sbjct: 6113171 attgatcctccaagaccaaatggaaccagaaccatcgaacctccacc 6113217 Score = 50.1 bits (25), Expect = 0.051 Identities = 58/69 (84%) Strand = Plus / Plus Query: 1782 agggaatgcagtcatatcctcaggcagcattttctcaacctacatatcaacagcctacat 1841 |||||||||| ||||||||||| |||||| |||||||| |||||||||| ||| || Sbjct: 6115901 agggaatgcaagcatatcctcagatggcatttgctcaacctgcatatcaacaacctgtat 6115960 Query: 1842 atcagcaac 1850 ||| ||||| Sbjct: 6115961 atccgcaac 6115969 Score = 46.1 bits (23), Expect = 0.79 Identities = 62/75 (82%) Strand = Plus / Plus Query: 2040 ttggtaactctagttttggagttccacctcagcagcctcagcagatgtatcagccacctg 2099 |||||| ||| ||||||||||| | || ||||| ||||||||| |||| ||| |||||| Sbjct: 6116430 ttggtacctcgagttttggagtccttccacagcaacctcagcagctgtaccagtcacctg 6116489 Query: 2100 tacatcaaagtattt 2114 || || |||||||| Sbjct: 6116490 cacctccaagtattt 6116504
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 252 bits (127), Expect = 7e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 552 aggacgataaggatgaacatagcgaaaatagaagatctgatggaaatcggggtggttcaa 611 |||| ||||||||||| |||| ||||| || ||||||||||||||| |||||||||||| Sbjct: 78153 aggatgataaggatgagtatagtgaaaacaggagatctgatggaaattggggtggttcaa 78212 Query: 612 gaagtccaccatataatgaaagttactctgaccgtcggagttatagtggacggagtgatg 671 ||||||| ||||| |||||||| || ||||| ||||| |||||||||||| |||| |||| Sbjct: 78213 gaagtccgccatacaatgaaagctattctgatcgtcgcagttatagtggaaggagcgatg 78272 Query: 672 acagaaattccagacattcctatggagaacgtagtcctggctatgaccagaatgattata 731 |||||||||||||| |||||||||||||||| |||||||||||||| || |||||||||| Sbjct: 78273 acagaaattccagatattcctatggagaacgaagtcctggctatgaacataatgattata 78332 Query: 732 agaaaagcccccgccactttgaagttg 758 |||||||||||||| |||||||||||| Sbjct: 78333 agaaaagcccccgctactttgaagttg 78359 Score = 190 bits (96), Expect = 2e-44 Identities = 188/218 (86%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 764 gatagatctgggaaaacaactccagttcaaaggttcgaggaccgcaggttttctgaacca 823 ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct: 78377 gatagatctggaaaaacaactccagttcaacggtttgaggaccgcaggccttctgaacca 78436 Query: 824 cgaaagccagagactgggtctccaaattaccagagagaagccaatggatctagtcctcct 883 | | |||||| | |||||||||||||||||||| ||| || |||||||||| ||| Sbjct: 78437 cagaggccagataatgggtctccaaattaccagaaggaaaccgatggatctag---ccct 78493 Query: 884 gttgtacggccagtgagggagatattgggtgatgatgctcctcaacttcggattggtgaa 943 |||||||||||||||||||| ||| |||||||| |||| |||||||| ||| ||||||| Sbjct: 78494 gttgtacggccagtgagggatatactgggtgataatgcacctcaactacgggttggtgag 78553 Query: 944 cctccaaagccgaatgtagccagaccgattgaccctcc 981 ||||| ||||| |||||||| ||| ||||||| ||||| Sbjct: 78554 cctcctaagccaaatgtagcgagaacgattgatcctcc 78591 Score = 151 bits (76), Expect = 2e-32 Identities = 97/104 (93%) Strand = Plus / Plus Query: 145 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 204 ||||||||||||| || | ||||||||||||| |||||||||| | |||||||||||||| Sbjct: 75030 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 75089 Query: 205 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgg 248 |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 75090 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgg 75133 Score = 103 bits (52), Expect = 4e-18 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2660 ttgtgacatcacaggcaacaaggaggggctggttccctcggcgtcggatatgatcaacaa 2719 ||||| ||| |||||||||||||||| ||||||||| | | || | |||||||||| Sbjct: 82615 ttgtggcattacaggcaacaaggaggtttgggttccctcaacatgggctttgatcaacaa 82674 Query: 2720 gctgcccctaggtactcccagccaagcaccccaccttcatatggtgctgtcggtggaaat 2779 ||||| || |||||| |||||||||||||||||||||| ||||| |||| || |||||| Sbjct: 82675 gctgctcccaggtacccccagccaagcaccccaccttcctatggctctgttgggggaaat 82734 Query: 2780 ccttttgggtaa 2791 |||||||||||| Sbjct: 82735 ccttttgggtaa 82746 Score = 101 bits (51), Expect = 2e-17 Identities = 60/63 (95%) Strand = Plus / Plus Query: 247 gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagc 306 ||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||| Sbjct: 77418 gggaccacaatatgtctgtacaaatttctggaccttcatttgtaccaattgcagtggagc 77477 Query: 307 aca 309 ||| Sbjct: 77478 aca 77480 Score = 91.7 bits (46), Expect = 1e-14 Identities = 73/82 (89%) Strand = Plus / Plus Query: 1904 cagcaaaatgcatatccccaacctgcgaaagcttcaaacccttttgacctcggaaatgag 1963 |||||| ||||||| ||||||||||||||||| ||||| |||||||| || || |||||| Sbjct: 81451 cagcaacatgcatacccccaacctgcgaaagcatcaaatccttttgatcttgggaatgag 81510 Query: 1964 gcagctccaattcaagctcaca 1985 |||||||| |||||||||||| Sbjct: 81511 ccagctccagttcaagctcaca 81532 Score = 89.7 bits (45), Expect = 6e-14 Identities = 101/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 1262 ggtgattgggcatcttttgatgcttttggccagcaacaacaaacaccacaatcaggcagc 1321 ||||| |||||||| |||||| |||| |||||||||| ||||||||||| | |||| Sbjct: 79110 ggtgactgggcatcgtttgattctttcggccagcaac---aaacaccacaaactggcaat 79166 Query: 1322 actgtaaatccgcttgagtctgtgcttgcacaactatcattctctgaaacaccctctgc 1380 | |||| |||| |||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 79167 agtgtagatccccttgagtctgcacttgctcaactatcattttctgaaacaccctctgc 79225 Score = 87.7 bits (44), Expect = 2e-13 Identities = 82/94 (87%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 2197 ctaatttgtgattcaacttcagaccattacatgatgcagcatgtttcaaacaacatgcct 2256 |||||||||| |||||||||||| ||||||||||||||||| ||| || |||||| || Sbjct: 82045 ctaatttgtggttcaacttcagatcattacatgatgcagcaagttcca---aacatgtct 82101 Query: 2257 gagcagctacctaatggcatgcttccaaggtgag 2290 |||||| |||||||| ||||||||||| ||||| Sbjct: 82102 gagcagttacctaataccatgcttccaatgtgag 82135 Score = 79.8 bits (40), Expect = 6e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 310 ccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaagt 369 ||||||||||||||| || | ||| || ||||| |||||||||||||||||||| ||||| Sbjct: 77626 ccgagagttcacgcatcgagcgaagtcagtttctatggctaaatttactgcacaggaagt 77685 Query: 370 cactgctctacaaggaggaggaaatgag 397 | ||| || |||| ||||||||||||| Sbjct: 77686 tagtgcccttcaagaaggaggaaatgag 77713 Score = 79.8 bits (40), Expect = 6e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 396 agcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatccataccctgaca 455 ||||||||||||||||||| ||||||||||||||| |||| |||||| | | |||||||| Sbjct: 77795 agcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattctttccctgaca 77854 Query: 456 gcag 459 |||| Sbjct: 77855 gcag 77858 Score = 75.8 bits (38), Expect = 9e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 457 cagtaatacggacaaattgaggaatttcatcaaatatgtttacgtggaacggcgatatac 516 ||||||| |||| ||||||||||| || || || ||||||| ||||||||| |||| || Sbjct: 77942 cagtaatgcggataaattgaggaactttattaagcatgtttatgtggaacggagatacac 78001 Query: 517 aggagaaagaagctctgatagaccaccgaggggaaagg 554 |||||||||||| | ||| | |||||||||||||||| Sbjct: 78002 aggagaaagaagtgcagatcggccaccgaggggaaagg 78039 Score = 60.0 bits (30), Expect = 5e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 1026 agaggacatctactgccagcagcattggttcttccgagggga 1067 |||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 78859 agaggacatcaactgccagcagtattggttcttcagagggga 78900 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Plus Query: 971 attgaccctccaaaaccaaatggagccaggaccattgaacctccacc 1017 ||||| ||||||| |||||||||| |||| ||||| ||||||||||| Sbjct: 78653 attgatcctccaagaccaaatggaaccagaaccatcgaacctccacc 78699 Score = 50.1 bits (25), Expect = 0.051 Identities = 58/69 (84%) Strand = Plus / Plus Query: 1782 agggaatgcagtcatatcctcaggcagcattttctcaacctacatatcaacagcctacat 1841 |||||||||| ||||||||||| |||||| |||||||| |||||||||| ||| || Sbjct: 81383 agggaatgcaagcatatcctcagatggcatttgctcaacctgcatatcaacaacctgtat 81442 Query: 1842 atcagcaac 1850 ||| ||||| Sbjct: 81443 atccgcaac 81451 Score = 46.1 bits (23), Expect = 0.79 Identities = 62/75 (82%) Strand = Plus / Plus Query: 2040 ttggtaactctagttttggagttccacctcagcagcctcagcagatgtatcagccacctg 2099 |||||| ||| ||||||||||| | || ||||| ||||||||| |||| ||| |||||| Sbjct: 81912 ttggtacctcgagttttggagtccttccacagcaacctcagcagctgtaccagtcacctg 81971 Query: 2100 tacatcaaagtattt 2114 || || |||||||| Sbjct: 81972 cacctccaagtattt 81986
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 252 bits (127), Expect = 7e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 552 aggacgataaggatgaacatagcgaaaatagaagatctgatggaaatcggggtggttcaa 611 |||| ||||||||||| |||| ||||| || ||||||||||||||| |||||||||||| Sbjct: 133510 aggatgataaggatgagtatagtgaaaacaggagatctgatggaaattggggtggttcaa 133569 Query: 612 gaagtccaccatataatgaaagttactctgaccgtcggagttatagtggacggagtgatg 671 ||||||| ||||| |||||||| || ||||| ||||| |||||||||||| |||| |||| Sbjct: 133570 gaagtccgccatacaatgaaagctattctgatcgtcgcagttatagtggaaggagcgatg 133629 Query: 672 acagaaattccagacattcctatggagaacgtagtcctggctatgaccagaatgattata 731 |||||||||||||| |||||||||||||||| |||||||||||||| || |||||||||| Sbjct: 133630 acagaaattccagatattcctatggagaacgaagtcctggctatgaacataatgattata 133689 Query: 732 agaaaagcccccgccactttgaagttg 758 |||||||||||||| |||||||||||| Sbjct: 133690 agaaaagcccccgctactttgaagttg 133716 Score = 190 bits (96), Expect = 2e-44 Identities = 188/218 (86%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 764 gatagatctgggaaaacaactccagttcaaaggttcgaggaccgcaggttttctgaacca 823 ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct: 133734 gatagatctggaaaaacaactccagttcaacggtttgaggaccgcaggccttctgaacca 133793 Query: 824 cgaaagccagagactgggtctccaaattaccagagagaagccaatggatctagtcctcct 883 | | |||||| | |||||||||||||||||||| ||| || |||||||||| ||| Sbjct: 133794 cagaggccagataatgggtctccaaattaccagaaggaaaccgatggatctag---ccct 133850 Query: 884 gttgtacggccagtgagggagatattgggtgatgatgctcctcaacttcggattggtgaa 943 |||||||||||||||||||| ||| |||||||| |||| |||||||| ||| ||||||| Sbjct: 133851 gttgtacggccagtgagggatatactgggtgataatgcacctcaactacgggttggtgag 133910 Query: 944 cctccaaagccgaatgtagccagaccgattgaccctcc 981 ||||| ||||| |||||||| ||| ||||||| ||||| Sbjct: 133911 cctcctaagccaaatgtagcgagaacgattgatcctcc 133948 Score = 151 bits (76), Expect = 2e-32 Identities = 97/104 (93%) Strand = Plus / Plus Query: 145 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 204 ||||||||||||| || | ||||||||||||| |||||||||| | |||||||||||||| Sbjct: 130387 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 130446 Query: 205 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgg 248 |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130447 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgg 130490 Score = 103 bits (52), Expect = 4e-18 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2660 ttgtgacatcacaggcaacaaggaggggctggttccctcggcgtcggatatgatcaacaa 2719 ||||| ||| |||||||||||||||| ||||||||| | | || | |||||||||| Sbjct: 137972 ttgtggcattacaggcaacaaggaggtttgggttccctcaacatgggctttgatcaacaa 138031 Query: 2720 gctgcccctaggtactcccagccaagcaccccaccttcatatggtgctgtcggtggaaat 2779 ||||| || |||||| |||||||||||||||||||||| ||||| |||| || |||||| Sbjct: 138032 gctgctcccaggtacccccagccaagcaccccaccttcctatggctctgttgggggaaat 138091 Query: 2780 ccttttgggtaa 2791 |||||||||||| Sbjct: 138092 ccttttgggtaa 138103 Score = 101 bits (51), Expect = 2e-17 Identities = 60/63 (95%) Strand = Plus / Plus Query: 247 gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagc 306 ||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||| Sbjct: 132775 gggaccacaatatgtctgtacaaatttctggaccttcatttgtaccaattgcagtggagc 132834 Query: 307 aca 309 ||| Sbjct: 132835 aca 132837 Score = 91.7 bits (46), Expect = 1e-14 Identities = 73/82 (89%) Strand = Plus / Plus Query: 1904 cagcaaaatgcatatccccaacctgcgaaagcttcaaacccttttgacctcggaaatgag 1963 |||||| ||||||| ||||||||||||||||| ||||| |||||||| || || |||||| Sbjct: 136808 cagcaacatgcatacccccaacctgcgaaagcatcaaatccttttgatcttgggaatgag 136867 Query: 1964 gcagctccaattcaagctcaca 1985 |||||||| |||||||||||| Sbjct: 136868 ccagctccagttcaagctcaca 136889 Score = 89.7 bits (45), Expect = 6e-14 Identities = 101/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 1262 ggtgattgggcatcttttgatgcttttggccagcaacaacaaacaccacaatcaggcagc 1321 ||||| |||||||| |||||| |||| |||||||||| ||||||||||| | |||| Sbjct: 134467 ggtgactgggcatcgtttgattctttcggccagcaac---aaacaccacaaactggcaat 134523 Query: 1322 actgtaaatccgcttgagtctgtgcttgcacaactatcattctctgaaacaccctctgc 1380 | |||| |||| |||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 134524 agtgtagatccccttgagtctgcacttgctcaactatcattttctgaaacaccctctgc 134582 Score = 87.7 bits (44), Expect = 2e-13 Identities = 82/94 (87%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 2197 ctaatttgtgattcaacttcagaccattacatgatgcagcatgtttcaaacaacatgcct 2256 |||||||||| |||||||||||| ||||||||||||||||| ||| || |||||| || Sbjct: 137402 ctaatttgtggttcaacttcagatcattacatgatgcagcaagttcca---aacatgtct 137458 Query: 2257 gagcagctacctaatggcatgcttccaaggtgag 2290 |||||| |||||||| ||||||||||| ||||| Sbjct: 137459 gagcagttacctaataccatgcttccaatgtgag 137492 Score = 79.8 bits (40), Expect = 6e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 310 ccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaagt 369 ||||||||||||||| || | ||| || ||||| |||||||||||||||||||| ||||| Sbjct: 132983 ccgagagttcacgcatcgagcgaagtcagtttctatggctaaatttactgcacaggaagt 133042 Query: 370 cactgctctacaaggaggaggaaatgag 397 | ||| || |||| ||||||||||||| Sbjct: 133043 tagtgcccttcaagaaggaggaaatgag 133070 Score = 79.8 bits (40), Expect = 6e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 396 agcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatccataccctgaca 455 ||||||||||||||||||| ||||||||||||||| |||| |||||| | | |||||||| Sbjct: 133152 agcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattctttccctgaca 133211 Query: 456 gcag 459 |||| Sbjct: 133212 gcag 133215 Score = 75.8 bits (38), Expect = 9e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 457 cagtaatacggacaaattgaggaatttcatcaaatatgtttacgtggaacggcgatatac 516 ||||||| |||| ||||||||||| || || || ||||||| ||||||||| |||| || Sbjct: 133299 cagtaatgcggataaattgaggaactttattaagcatgtttatgtggaacggagatacac 133358 Query: 517 aggagaaagaagctctgatagaccaccgaggggaaagg 554 |||||||||||| | ||| | |||||||||||||||| Sbjct: 133359 aggagaaagaagtgcagatcggccaccgaggggaaagg 133396 Score = 60.0 bits (30), Expect = 5e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 1026 agaggacatctactgccagcagcattggttcttccgagggga 1067 |||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 134216 agaggacatcaactgccagcagtattggttcttcagagggga 134257 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Plus Query: 971 attgaccctccaaaaccaaatggagccaggaccattgaacctccacc 1017 ||||| ||||||| |||||||||| |||| ||||| ||||||||||| Sbjct: 134010 attgatcctccaagaccaaatggaaccagaaccatcgaacctccacc 134056 Score = 50.1 bits (25), Expect = 0.051 Identities = 58/69 (84%) Strand = Plus / Plus Query: 1782 agggaatgcagtcatatcctcaggcagcattttctcaacctacatatcaacagcctacat 1841 |||||||||| ||||||||||| |||||| |||||||| |||||||||| ||| || Sbjct: 136740 agggaatgcaagcatatcctcagatggcatttgctcaacctgcatatcaacaacctgtat 136799 Query: 1842 atcagcaac 1850 ||| ||||| Sbjct: 136800 atccgcaac 136808 Score = 46.1 bits (23), Expect = 0.79 Identities = 62/75 (82%) Strand = Plus / Plus Query: 2040 ttggtaactctagttttggagttccacctcagcagcctcagcagatgtatcagccacctg 2099 |||||| ||| ||||||||||| | || ||||| ||||||||| |||| ||| |||||| Sbjct: 137269 ttggtacctcgagttttggagtccttccacagcaacctcagcagctgtaccagtcacctg 137328 Query: 2100 tacatcaaagtattt 2114 || || |||||||| Sbjct: 137329 cacctccaagtattt 137343
>gb|BT016495.1| Zea mays clone Contig328 mRNA sequence Length = 1381 Score = 153 bits (77), Expect = 5e-33 Identities = 266/329 (80%) Strand = Plus / Plus Query: 1476 cacccgttggaatctcaggcaatcaggcctcaacaggaatgcccgtccaaggatctgcag 1535 ||||| |||||||||||||||| ||||||||||||| |||| | | ||||| | | | | Sbjct: 251 caccctttggaatctcaggcaaccaggcctcaacagtaatgtctggccaagaaacatcgg 310 Query: 1536 ttcatcaatctgctgtggctgcccctatgggtggtcttccatctctattgccttcaaatt 1595 |||| |||||| || | |||||||||| || ||| |||||||||| | || ||||| Sbjct: 311 ttcaacaatcttctatagctgcccctacggctggacttccatctcaagctactgcaaatc 370 Query: 1596 ctcaaggaacaagtggtattcaagaagcaacgtcttctcatgacagcaaatccagtgggc 1655 |||||||| ||||||||||||| |||| | |||||| |||||| |||| |||||| Sbjct: 371 aacaaggaaccagtggtattcaaggagcagcttcttctactgacagtaaattcagtggca 430 Query: 1656 ggacagcacttccagtggatttctttacttcactttatccatcagcaactccagcaatgc 1715 ||| || |||||||| |||| |||||||| |||| |||||| || |||||||| |||| Sbjct: 431 ggaaagaacttccagcggatatctttactgcactatatccaccatcaactccaatgatgc 490 Query: 1716 ctggctggcagagagctccccagtctggaatgggatttggcatgcagtatcctgccggaa 1775 |||| ||||||||||| ||||| | ||||||||||| | |||||| ||||| | ||| Sbjct: 491 ctggttggcagagagccccccattttggaatgggatacgccatgcaatatccacctggag 550 Query: 1776 tgttgcagggaatgcagtcatatcctcag 1804 |||| ||||||||||| ||||||||||| Sbjct: 551 tgttccagggaatgcaagcatatcctcag 579 Score = 117 bits (59), Expect = 3e-22 Identities = 121/141 (85%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 1240 aagtgctccatcagtgagcggcggtgattgggcatcttttgatgcttttggccagcaaca 1299 ||||||||| || || || || ||||||||||||||||||||||||||||| | ||| Sbjct: 12 aagtgctccttctgtcagtggtggtgattgggcatcttttgatgcttttgg---tctaca 68 Query: 1300 acaaacaccacaatcaggcagcactgtaaatccgcttgagtctgtgcttgcacaactatc 1359 ||||||||| ||| || |||||| ||||||||| |||||||||| |||||||| || || Sbjct: 69 acaaacacctcaaacaagcagcagtgtaaatccccttgagtctgcacttgcacagctgtc 128 Query: 1360 attctctgaaacaccctctgc 1380 |||||||||| |||||||||| Sbjct: 129 attctctgaagcaccctctgc 149 Score = 113 bits (57), Expect = 4e-21 Identities = 135/161 (83%) Strand = Plus / Plus Query: 1919 ccccaacctgcgaaagcttcaaacccttttgacctcggaaatgaggcagctccaattcaa 1978 |||||||||| ||||||||||||||||||||| || || |||| | ||||||||| |||| Sbjct: 625 ccccaacctgtgaaagcttcaaacccttttgatcttgggaatgggccagctccaactcaa 684 Query: 1979 gctcacatgtccctatctggaccactgggagcatcagcaggcgctgctaacccaacatta 2038 ||||||||| ||| ||||||| ||| |||| || ||||||| | ||| || ||| ||| Sbjct: 685 gctcacatgcccccatctggaacaccaggagtattagcaggcccagctccccaaacctta 744 Query: 2039 gttggtaactctagttttggagttccacctcagcagcctca 2079 || | |||||||||||||| ||||| || ||||||||||| Sbjct: 745 attagcaactctagttttggtgttcctccacagcagcctca 785
>gb|AY104782.1| Zea mays PCO068830 mRNA sequence Length = 923 Score = 121 bits (61), Expect = 2e-23 Identities = 136/161 (84%) Strand = Plus / Plus Query: 1919 ccccaacctgcgaaagcttcaaacccttttgacctcggaaatgaggcagctccaattcaa 1978 |||||||||| ||||||||||||||||||||| || || |||| | ||||||||| |||| Sbjct: 292 ccccaacctgtgaaagcttcaaacccttttgatcttgggaatgggccagctccaactcaa 351 Query: 1979 gctcacatgtccctatctggaccactgggagcatcagcaggcgctgctaacccaacatta 2038 ||||||||| ||| ||||||||||| |||| || ||||||| | ||| || ||| ||| Sbjct: 352 gctcacatgcccccatctggaccaccaggagtattagcaggcccagctccccaaacctta 411 Query: 2039 gttggtaactctagttttggagttccacctcagcagcctca 2079 || | |||||||||||||| ||||| || ||||||||||| Sbjct: 412 attagcaactctagttttggtgttcctccacagcagcctca 452 Score = 117 bits (59), Expect = 3e-22 Identities = 170/207 (82%) Strand = Plus / Plus Query: 1598 caaggaacaagtggtattcaagaagcaacgtcttctcatgacagcaaatccagtgggcgg 1657 |||||||| ||||||||||||| |||| | |||||| |||||| |||| |||||| || Sbjct: 40 caaggaaccagtggtattcaaggagcagcttcttctactgacagtaaattcagtggcagg 99 Query: 1658 acagcacttccagtggatttctttacttcactttatccatcagcaactccagcaatgcct 1717 | || |||||||| |||| |||||||| |||| |||||| || |||||||| |||||| Sbjct: 100 aaagaacttccagcggatatctttactgcactatatccaccatcaactccaatgatgcct 159 Query: 1718 ggctggcagagagctccccagtctggaatgggatttggcatgcagtatcctgccggaatg 1777 || ||||||||||| ||||| | ||||||||||| | | |||| ||||| | ||| || Sbjct: 160 ggttggcagagagccccccattttggaatgggatacgccgtgcaatatccacctggagtg 219 Query: 1778 ttgcagggaatgcagtcatatcctcag 1804 || ||||||||||| ||||||||||| Sbjct: 220 ttccagggaatgcaagcatatcctcag 246
>gb|BT013593.1| Lycopersicon esculentum clone 132356R, mRNA sequence Length = 2645 Score = 107 bits (54), Expect = 3e-19 Identities = 153/186 (82%) Strand = Plus / Plus Query: 244 tttgggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgg 303 |||||| ||||||||||| ||||| ||||||||||| || ||||| || | |||||||| Sbjct: 177 tttggggccacaatatgtttgcactaatttctggacatttgtttgcacaacatgcagtgg 236 Query: 304 agcacaccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcaca 363 |||||| |||||||| || | |||||||| || ||||||||||||||||| |||| Sbjct: 237 tttacaccgggagttcacccatagagtgaaatcagtatccatggctaaatttacctcaca 296 Query: 364 agaagtcactgctctacaaggaggaggaaatgagcgtgctagagaaatatttttcaagga 423 |||||| | ||| || |||||||||||||||| | |||| | ||||||| ||| ||||| Sbjct: 297 agaagttagtgcccttcaaggaggaggaaatgcgagtgcaaaggaaatatatttgaagga 356 Query: 424 atggga 429 ||||| Sbjct: 357 ttggga 362
>emb|AJ575233.1|OSA575233 Oryza sativa (japonica cultivar-group) partial mRNA for ZIGA2 protein Length = 390 Score = 91.7 bits (46), Expect = 1e-14 Identities = 73/82 (89%) Strand = Plus / Plus Query: 1904 cagcaaaatgcatatccccaacctgcgaaagcttcaaacccttttgacctcggaaatgag 1963 |||||| ||||||| ||||||||||||||||| ||||| |||||||| || || |||||| Sbjct: 7 cagcaacatgcatacccccaacctgcgaaagcatcaaatccttttgatcttgggaatgag 66 Query: 1964 gcagctccaattcaagctcaca 1985 |||||||| |||||||||||| Sbjct: 67 ccagctccagttcaagctcaca 88 Score = 81.8 bits (41), Expect = 1e-11 Identities = 65/73 (89%) Strand = Plus / Plus Query: 2710 tgatcaacaagctgcccctaggtactcccagccaagcaccccaccttcatatggtgctgt 2769 ||||||||||||||| || |||||| |||||||||||||||||||||| ||||| |||| Sbjct: 318 tgatcaacaagctgctcccaggtacccccagccaagcaccccaccttcctatggctctgt 377 Query: 2770 cggtggaaatcct 2782 || ||||||||| Sbjct: 378 tgggggaaatcct 390 Score = 52.0 bits (26), Expect = 0.013 Identities = 55/64 (85%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 2221 cattacatgatgcagcatgtttcaaacaacatgcctgagcagctacctaatggcatgctt 2280 ||||||||||||||||| ||| |||||| || |||||||| |||||||| ||||||| Sbjct: 220 cattacatgatgcagcaagttccaaaca---tgtctgagcagttacctaataccatgctt 276 Query: 2281 ccaa 2284 |||| Sbjct: 277 ccaa 280
>ref|NM_001062686.1| Oryza sativa (japonica cultivar-group) Os05g0534800 (Os05g0534800) mRNA, complete cds Length = 1653 Score = 81.8 bits (41), Expect = 1e-11 Identities = 200/253 (79%) Strand = Plus / Plus Query: 149 atggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgctcaag 208 |||| |||| ||||||||||||| |||| ||||||| ||| || || | ||||||||| Sbjct: 1 atggggagcagggtgaaggaggaggagaggaacgagagggccatccgggccctgctcaag 60 Query: 209 ctgcccgcaaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtatgcaca 268 ||||||| ||| | |||||||||||||||| ||||||||||||| ||||||||| Sbjct: 61 ctgcccggcaaccgccgctgcatcaactgcaacagcctgggaccacaatacgtatgcaca 120 Query: 269 aatttctggaccttcgtttgtaccaattgcagtggagcacaccgagagttcacgcaccgg 328 | |||| || ||||| ||| | |||||| ||| ||| || |||||||| || || Sbjct: 121 agcttctcaactttcgtctgtgttagttgcagcggaatacatcgggagttcactcatcgt 180 Query: 329 gtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaaggagga 388 || ||||| | || ||||||||||||||| | |||||||| ||||||| |||| ||| Sbjct: 181 gtaaaatcaatatcaatggctaaatttacttctcaagaagtttctgctcttcaagaaggg 240 Query: 389 ggaaatgagcgtg 401 ||||| ||||||| Sbjct: 241 ggaaacgagcgtg 253
>gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete sequence Length = 122694 Score = 75.8 bits (38), Expect = 9e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 247 gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgga 304 ||||||||||||||||||||||||||||||||| || ||||| || || ||||||||| Sbjct: 28005 gggaccacaatatgtatgcacaaatttctggacgtttgtttgcacaaactgcagtgga 27948 Score = 67.9 bits (34), Expect = 2e-07 Identities = 49/54 (90%) Strand = Plus / Minus Query: 341 tccatggctaaatttactgcacaagaagtcactgctctacaaggaggaggaaat 394 ||||||||||||||||||||||||||||| | ||| || |||| |||||||||| Sbjct: 27556 tccatggctaaatttactgcacaagaagttagtgcacttcaagaaggaggaaat 27503 Score = 46.1 bits (23), Expect = 0.79 Identities = 32/35 (91%) Strand = Plus / Minus Query: 396 agcgtgctagagaaatatttttcaaggaatgggat 430 ||||||| | ||||||||||||||| ||||||||| Sbjct: 27399 agcgtgcaaaagaaatatttttcaaagaatgggat 27365
>ref|NM_179209.1| Arabidopsis thaliana unknown protein (AT4G13350) mRNA, complete cds Length = 2335 Score = 73.8 bits (37), Expect = 4e-09 Identities = 106/129 (82%) Strand = Plus / Plus Query: 248 ggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagca 307 |||||||||||||| ||||| | ||||||||| || ||||||||||| ||||||||| | Sbjct: 230 ggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtggaata 289 Query: 308 caccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaa 367 || || ||||| || || || || ||||| | || ||||| |||||||| |||||||| Sbjct: 290 catcgtgagtttacacatcgtgttaaatcgatatcaatggcgaaatttacctcacaagaa 349 Query: 368 gtcactgct 376 || |||||| Sbjct: 350 gttactgct 358
>ref|NM_117409.3| Arabidopsis thaliana unknown protein (AT4G13350) mRNA, complete cds Length = 2475 Score = 73.8 bits (37), Expect = 4e-09 Identities = 106/129 (82%) Strand = Plus / Plus Query: 248 ggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagca 307 |||||||||||||| ||||| | ||||||||| || ||||||||||| ||||||||| | Sbjct: 370 ggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtggaata 429 Query: 308 caccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaa 367 || || ||||| || || || || ||||| | || ||||| |||||||| |||||||| Sbjct: 430 catcgtgagtttacacatcgtgttaaatcgatatcaatggcgaaatttacctcacaagaa 489 Query: 368 gtcactgct 376 || |||||| Sbjct: 490 gttactgct 498
>gb|BT000809.1| Arabidopsis thaliana At4g13350 mRNA sequence Length = 2435 Score = 73.8 bits (37), Expect = 4e-09 Identities = 106/129 (82%) Strand = Plus / Plus Query: 248 ggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagca 307 |||||||||||||| ||||| | ||||||||| || ||||||||||| ||||||||| | Sbjct: 201 ggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtggaata 260 Query: 308 caccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaa 367 || || ||||| || || || || ||||| | || ||||| |||||||| |||||||| Sbjct: 261 catcgtgagtttacacatcgtgttaaatcgatatcaatggcgaaatttacctcacaagaa 320 Query: 368 gtcactgct 376 || |||||| Sbjct: 321 gttactgct 329
>gb|BT008379.1| Arabidopsis thaliana At4g13350 gene, complete cds Length = 1809 Score = 73.8 bits (37), Expect = 4e-09 Identities = 106/129 (82%) Strand = Plus / Plus Query: 248 ggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagca 307 |||||||||||||| ||||| | ||||||||| || ||||||||||| ||||||||| | Sbjct: 100 ggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtggaata 159 Query: 308 caccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaa 367 || || ||||| || || || || ||||| | || ||||| |||||||| |||||||| Sbjct: 160 catcgtgagtttacacatcgtgttaaatcgatatcaatggcgaaatttacctcacaagaa 219 Query: 368 gtcactgct 376 || |||||| Sbjct: 220 gttactgct 228
>gb|AY062505.1| Arabidopsis thaliana putative protein (At4g13350; T9E8.90) mRNA, complete cds Length = 2336 Score = 73.8 bits (37), Expect = 4e-09 Identities = 106/129 (82%) Strand = Plus / Plus Query: 248 ggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagca 307 |||||||||||||| ||||| | ||||||||| || ||||||||||| ||||||||| | Sbjct: 230 ggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtggaata 289 Query: 308 caccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaa 367 || || ||||| || || || || ||||| | || ||||| |||||||| |||||||| Sbjct: 290 catcgtgagtttacacatcgtgttaaatcgatatcaatggcgaaatttacctcacaagaa 349 Query: 368 gtcactgct 376 || |||||| Sbjct: 350 gttactgct 358
>ref|NM_001051137.1| Oryza sativa (japonica cultivar-group) Os01g0813900 (Os01g0813900) mRNA, complete cds Length = 3224 Score = 67.9 bits (34), Expect = 2e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 226 gtgcatcaactgcaacaatttgggaccacaatatgtatgcacaaatttctggaccttc 283 ||||||||| ||||||| | |||| |||||||||||||| || ||||||||||||||| Sbjct: 337 gtgcatcaattgcaacagtgtggggccacaatatgtatgtaccaatttctggaccttc 394
>emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 36 Length = 199634 Score = 67.9 bits (34), Expect = 2e-07 Identities = 52/58 (89%) Strand = Plus / Minus Query: 247 gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgga 304 ||||||||||||||| ||||| | ||||||||| || ||||||||||| ||||||||| Sbjct: 59871 gggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtgga 59814
>emb|AL049608.1|ATT9E8 Arabidopsis thaliana DNA chromosome 4, BAC clone T9E8, partial sequence (ESSA project) Length = 95432 Score = 67.9 bits (34), Expect = 2e-07 Identities = 52/58 (89%) Strand = Plus / Minus Query: 247 gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgga 304 ||||||||||||||| ||||| | ||||||||| || ||||||||||| ||||||||| Sbjct: 43892 gggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtgga 43835
>dbj|AK101729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F19, full insert sequence Length = 3225 Score = 67.9 bits (34), Expect = 2e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 226 gtgcatcaactgcaacaatttgggaccacaatatgtatgcacaaatttctggaccttc 283 ||||||||| ||||||| | |||| |||||||||||||| || ||||||||||||||| Sbjct: 338 gtgcatcaattgcaacagtgtggggccacaatatgtatgtaccaatttctggaccttc 395
>dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT03K19, TM0214, complete sequence Length = 95881 Score = 67.9 bits (34), Expect = 2e-07 Identities = 52/58 (89%) Strand = Plus / Minus Query: 247 gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgga 304 ||||||||||||||| ||||||||||||||||| || ||||| || || ||||||||| Sbjct: 62610 gggaccacaatatgtgtgcacaaatttctggacgtttgtttgcacaaactgcagtgga 62553 Score = 54.0 bits (27), Expect = 0.003 Identities = 54/63 (85%) Strand = Plus / Minus Query: 332 aaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaaggaggagga 391 ||||| ||||| ||||| |||||||||||||||||||| | || || |||| ||||||| Sbjct: 62092 aaatcagtttcaatggcaaaatttactgcacaagaagttagcgcacttcaagaaggagga 62033 Query: 392 aat 394 ||| Sbjct: 62032 aat 62030
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b, complete sequence Length = 92148 Score = 60.0 bits (30), Expect = 5e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 247 gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgga 304 ||||||||||||||| ||||| ||||||||||| || ||||| || || ||||||||| Sbjct: 22329 gggaccacaatatgtgtgcacgaatttctggacgtttgtttgcactaactgcagtgga 22272 Score = 52.0 bits (26), Expect = 0.013 Identities = 56/66 (84%) Strand = Plus / Minus Query: 329 gtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaaggagga 388 |||||||| |||| ||||||||||||||| | |||||||| | ||| || |||| |||| Sbjct: 21784 gtgaaatcaatttcaatggctaaatttacttcgcaagaagttattgcacttcaagaagga 21725 Query: 389 ggaaat 394 |||||| Sbjct: 21724 ggaaat 21719 Score = 48.1 bits (24), Expect = 0.20 Identities = 42/48 (87%) Strand = Plus / Minus Query: 163 gaaggaggacgagaagaacgagcgggtaatacgcgggctgctcaagct 210 ||||||||||||||| |||||||| || || || || ||||||||||| Sbjct: 24424 gaaggaggacgagaaaaacgagcgcgtcattcgaggtctgctcaagct 24377
>ref|NM_119415.2| Arabidopsis thaliana unknown protein (AT4G32630) mRNA, complete cds Length = 2352 Score = 50.1 bits (25), Expect = 0.051 Identities = 46/53 (86%) Strand = Plus / Plus Query: 227 tgcatcaactgcaacaatttgggaccacaatatgtatgcacaaatttctggac 279 |||||||| ||||| | | |||| ||||||||||||||| ||| ||||||||| Sbjct: 314 tgcatcaattgcaatagtctgggtccacaatatgtatgctcaactttctggac 366
>gb|AY735660.1| Arabidopsis thaliana hypothetical protein AT4G32630 mRNA, complete cds Length = 2387 Score = 50.1 bits (25), Expect = 0.051 Identities = 46/53 (86%) Strand = Plus / Plus Query: 227 tgcatcaactgcaacaatttgggaccacaatatgtatgcacaaatttctggac 279 |||||||| ||||| | | |||| ||||||||||||||| ||| ||||||||| Sbjct: 314 tgcatcaattgcaatagtctgggtccacaatatgtatgctcaactttctggac 366
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 50.1 bits (25), Expect = 0.051 Identities = 31/33 (93%) Strand = Plus / Plus Query: 251 ccacaatatgtatgcacaaatttctggaccttc 283 |||||||||||||| || ||||||||||||||| Sbjct: 34607173 ccacaatatgtatgtaccaatttctggaccttc 34607205
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 50.1 bits (25), Expect = 0.051 Identities = 31/33 (93%) Strand = Plus / Plus Query: 251 ccacaatatgtatgcacaaatttctggaccttc 283 |||||||||||||| || ||||||||||||||| Sbjct: 59190 ccacaatatgtatgtaccaatttctggaccttc 59222
>gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete sequence Length = 253132 Score = 50.1 bits (25), Expect = 0.051 Identities = 31/33 (93%) Strand = Plus / Minus Query: 2151 tttattattattactgctaccagtactactact 2183 ||||||||||||||| |||||| |||||||||| Sbjct: 123253 tttattattattactactaccattactactact 123221
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 50.1 bits (25), Expect = 0.051 Identities = 31/33 (93%) Strand = Plus / Plus Query: 251 ccacaatatgtatgcacaaatttctggaccttc 283 |||||||||||||| || ||||||||||||||| Sbjct: 104467 ccacaatatgtatgtaccaatttctggaccttc 104499
>gb|AY954862.1| Arabidopsis thaliana hypothetical protein (At4g32630) mRNA, complete cds Length = 1884 Score = 50.1 bits (25), Expect = 0.051 Identities = 46/53 (86%) Strand = Plus / Plus Query: 227 tgcatcaactgcaacaatttgggaccacaatatgtatgcacaaatttctggac 279 |||||||| ||||| | | |||| ||||||||||||||| ||| ||||||||| Sbjct: 67 tgcatcaattgcaatagtctgggtccacaatatgtatgctcaactttctggac 119
>dbj|AB231864.1| Schistosoma mansoni gene for zinc finger protein Sma-Zic, complete cds Length = 129140 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2152 ttattattattactgctaccagtactactact 2183 ||||||||||||||||||| | |||||||||| Sbjct: 91847 ttattattattactgctactactactactact 91878
>ref|NM_001035925.1| Arabidopsis thaliana ZIGA4; DNA binding (ZIGA4) mRNA, complete cds Length = 2566 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Plus Query: 254 caatatgtatgcacaaatttctggaccttcgt 285 |||||||| ||||||| ||||||||||||||| Sbjct: 283 caatatgtttgcacaactttctggaccttcgt 314
>ref|NM_100741.3| Arabidopsis thaliana ZIGA4; DNA binding (ZIGA4) mRNA, complete cds Length = 2741 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Plus Query: 254 caatatgtatgcacaaatttctggaccttcgt 285 |||||||| ||||||| ||||||||||||||| Sbjct: 320 caatatgtttgcacaactttctggaccttcgt 351
>ref|NM_180610.2| Arabidopsis thaliana ZIGA4; DNA binding (ZIGA4) mRNA, complete cds Length = 2744 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Plus Query: 254 caatatgtatgcacaaatttctggaccttcgt 285 |||||||| ||||||| ||||||||||||||| Sbjct: 320 caatatgtttgcacaactttctggaccttcgt 351
>ref|XM_631738.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0219317) mRNA, complete cds Length = 4572 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Minus Query: 2152 ttattattattactgctaccagtactactact 2183 ||||||||||||||||||||| ||||| |||| Sbjct: 1676 ttattattattactgctaccattactattact 1645
>gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1014_C08, complete sequence Length = 95638 Score = 48.1 bits (24), Expect = 0.20 Identities = 57/68 (83%) Strand = Plus / Plus Query: 148 gatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgctcaa 207 ||||| |||| ||||||||||||| |||| ||||||| ||| || || | |||||||| Sbjct: 45712 gatggggagcagggtgaaggaggaggagaggaacgagagggccatccgggccctgctcaa 45771 Query: 208 gctgcccg 215 |||||||| Sbjct: 45772 gctgcccg 45779 Score = 44.1 bits (22), Expect = 3.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 344 atggctaaatttactgcacaagaagtcactgctctacaaggaggaggaaa 393 ||||||||||||||| | |||||||| ||||||| |||| ||| ||||| Sbjct: 47195 atggctaaatttacttctcaagaagtttctgctcttcaagaagggggaaa 47244
>gb|BT008398.1| Arabidopsis thaliana At1g08690 gene, complete cds Length = 1947 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Plus Query: 254 caatatgtatgcacaaatttctggaccttcgt 285 |||||||| ||||||| ||||||||||||||| Sbjct: 106 caatatgtttgcacaactttctggaccttcgt 137
>ref|XM_626574.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_3900), partial mRNA Length = 3726 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Minus Query: 2152 ttattattattactgctaccagtactactact 2183 ||||||||||||||||||| | |||||||||| Sbjct: 3554 ttattattattactgctactactactactact 3523
>gb|AY081303.1| Arabidopsis thaliana unknown protein (At1g08690) mRNA, complete cds Length = 2392 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Plus Query: 254 caatatgtatgcacaaatttctggaccttcgt 285 |||||||| ||||||| ||||||||||||||| Sbjct: 320 caatatgtttgcacaactttctggaccttcgt 351
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 48.1 bits (24), Expect = 0.20 Identities = 57/68 (83%) Strand = Plus / Plus Query: 148 gatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgctcaa 207 ||||| |||| ||||||||||||| |||| ||||||| ||| || || | |||||||| Sbjct: 26348359 gatggggagcagggtgaaggaggaggagaggaacgagagggccatccgggccctgctcaa 26348418 Query: 208 gctgcccg 215 |||||||| Sbjct: 26348419 gctgcccg 26348426 Score = 44.1 bits (22), Expect = 3.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 344 atggctaaatttactgcacaagaagtcactgctctacaaggaggaggaaa 393 ||||||||||||||| | |||||||| ||||||| |||| ||| ||||| Sbjct: 26349842 atggctaaatttacttctcaagaagtttctgctcttcaagaagggggaaa 26349891
>gb|AF184145.1|AF184145 Arabidopsis thaliana ARF GAP-like zinc finger-containing protein ZiGA4 mRNA, complete cds Length = 2325 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Plus Query: 254 caatatgtatgcacaaatttctggaccttcgt 285 |||||||| ||||||| ||||||||||||||| Sbjct: 259 caatatgtttgcacaactttctggaccttcgt 290
>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome I, complete sequence Length = 133843 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Plus Query: 254 caatatgtatgcacaaatttctggaccttcgt 285 |||||||| ||||||| ||||||||||||||| Sbjct: 61227 caatatgtttgcacaactttctggaccttcgt 61258
>dbj|AK176415.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL24-14-I23 Length = 2243 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Plus Query: 254 caatatgtatgcacaaatttctggaccttcgt 285 |||||||| ||||||| ||||||||||||||| Sbjct: 283 caatatgtttgcacaactttctggaccttcgt 314
>emb|BX005463.5| Zebrafish DNA sequence from clone CH211-177H19 in linkage group 6, complete sequence Length = 163804 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Minus Query: 2152 ttattattattactgctaccagtactactact 2183 |||||||||||||| |||| |||||||||||| Sbjct: 10395 ttattattattactactactagtactactact 10364
>emb|CR932059.8| Zebrafish DNA sequence from clone DKEYP-67G8 in linkage group 12, complete sequence Length = 106170 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2152 ttattattattactgctaccagtactactac 2182 |||||||||||||| |||||| ||||||||| Sbjct: 57319 ttattattattactactaccactactactac 57349
>gb|DQ504303.1| Amia calva parahox gene cluster, complete sequence Length = 41646 Score = 46.1 bits (23), Expect = 0.79 Identities = 32/35 (91%) Strand = Plus / Minus Query: 2149 tctttattattattactgctaccagtactactact 2183 ||||||||||||||||| |||| | |||||||||| Sbjct: 23125 tctttattattattactactactactactactact 23091
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 46.1 bits (23), Expect = 0.79 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1214 ccacaacatgttcttgaacaagg 1236 ||||||||||||||||||||||| Sbjct: 577667 ccacaacatgttcttgaacaagg 577645
>ref|XM_640562.1| Dictyostelium discoideum AX4 RING Zn finger-containing protein (DDB_0220714) mRNA, complete cds Length = 3000 Score = 46.1 bits (23), Expect = 0.79 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2152 ttattattattactgctaccagtacta 2178 |||||||||||||| |||||||||||| Sbjct: 299 ttattattattactactaccagtacta 273
>gb|AC107851.17| Mus musculus chromosome 9, clone RP23-451B4, complete sequence Length = 190253 Score = 46.1 bits (23), Expect = 0.79 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1360 attctctgaaacaccctctgcctccag 1386 |||||||||| |||||||||||||||| Sbjct: 165714 attctctgaatcaccctctgcctccag 165740
>gb|AE017335.3| Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence Length = 94830 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1840 atatcagcaacctatgtatcagcaacctaca 1870 |||||||||||| |||||||| ||||||||| Sbjct: 13868 atatcagcaaccgatgtatcaacaacctaca 13838
>gb|AF188935.1| Bacillus anthracis plasmid pXO2, complete sequence Length = 96231 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1840 atatcagcaacctatgtatcagcaacctaca 1870 |||||||||||| |||||||| ||||||||| Sbjct: 14361 atatcagcaaccgatgtatcaacaacctaca 14331
>gb|AE011191.1| Bacillus anthracis str. A2012 plasmid pXO2, complete sequence Length = 94829 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1840 atatcagcaacctatgtatcagcaacctaca 1870 |||||||||||| |||||||| ||||||||| Sbjct: 13868 atatcagcaaccgatgtatcaacaacctaca 13838
>emb|AL121871.8|HSB258O15 Human DNA sequence from clone RP13-258O15 on chromosome X Contains a ribosomal protein L26 pseudogene, complete sequence Length = 183876 Score = 46.1 bits (23), Expect = 0.79 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1712 atgcctggctggcagagagctcc 1734 ||||||||||||||||||||||| Sbjct: 149862 atgcctggctggcagagagctcc 149884
>gb|AF360747.1|AF360747 Bacillus anthracis detection probe KHT2 Length = 808 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1840 atatcagcaacctatgtatcagcaacctaca 1870 |||||||||||| |||||||| ||||||||| Sbjct: 757 atatcagcaaccgatgtatcaacaacctaca 787
>gb|AC167467.1| Mus musculus BAC clone RP23-158E17 from chromosome 9, complete sequence Length = 212426 Score = 46.1 bits (23), Expect = 0.79 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1360 attctctgaaacaccctctgcctccag 1386 |||||||||| |||||||||||||||| Sbjct: 5585 attctctgaatcaccctctgcctccag 5611
>emb|Z92789.1|CEH02I12 Caenorhabditis elegans Fosmid H02I12, complete sequence Length = 34087 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1615 tcaagaagcaacgtcttctcatgacagcaaa 1645 |||||||| |||||||||| ||||||||||| Sbjct: 27233 tcaagaagtaacgtcttctaatgacagcaaa 27203
>emb|AL928687.5| Mouse DNA sequence from clone RP23-384L16 on chromosome 2, complete sequence Length = 192096 Score = 46.1 bits (23), Expect = 0.79 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2152 ttattattattactgctaccagtacta 2178 ||||||||||||||||||| ||||||| Sbjct: 44031 ttattattattactgctactagtacta 44057
>ref|XM_001022287.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00502330) mRNA, complete cds Length = 2340 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2149 tctttattattattactgctac 2170 |||||||||||||||||||||| Sbjct: 417 tctttattattattactgctac 396
>gb|AC191936.2| Gallus gallus BAC clone CH261-166F13 from chromosome z, complete sequence Length = 164492 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2154 attattattactgctaccagtactactact 2183 ||||||||||||||||| | |||||||||| Sbjct: 69414 attattattactgctactactactactact 69385
>ref|XM_001080148.1| PREDICTED: Rattus norvegicus similar to contains transmembrane (TM) region (predicted) (RGD1306235_predicted), mRNA Length = 2111 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 tctcccgcagggtttgcggcgg 145 |||||||||||||||||||||| Sbjct: 739 tctcccgcagggtttgcggcgg 718
>ref|XM_632538.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0218860) mRNA, complete cds Length = 3132 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2152 ttattattattactgctaccagtactacta 2181 |||||||||||| | ||||||||||||||| Sbjct: 2294 ttattattattattactaccagtactacta 2265
>gb|AC151759.1| Ornithorhynchus anatinus chromosome UNK clone OABb-454P24, complete sequence Length = 147999 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2150 ctttattattattactgctaccagta 2175 |||||||| ||||||||||||||||| Sbjct: 96606 ctttattactattactgctaccagta 96631
>gb|AC117678.16| Mus musculus chromosome 6, clone RP23-421M9, complete sequence Length = 204437 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1956 gaaatgaggcagctccaattca 1977 |||||||||||||||||||||| Sbjct: 177469 gaaatgaggcagctccaattca 177490
>gb|AC115631.4| Mus musculus BAC clone RP24-128K6 from 18, complete sequence Length = 179355 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2659 cttgtgacatcacaggcaacaa 2680 |||||||||||||||||||||| Sbjct: 114518 cttgtgacatcacaggcaacaa 114539
>gb|AC027740.11| Mus musculus, clone RP23-57M1, complete sequence Length = 261093 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2659 cttgtgacatcacaggcaacaa 2680 |||||||||||||||||||||| Sbjct: 103883 cttgtgacatcacaggcaacaa 103904
>gb|AF336378.1| Mus musculus Kel blood group protein (Kel), epithelial calcium channel 1 (Ecac1), epithelial calcium channel 2 (Ecac2), and ephrin type A receptor (Mep) genes, complete cds; and T cell receptor beta chain (Tcr) gene, partial cds Length = 169781 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1956 gaaatgaggcagctccaattca 1977 |||||||||||||||||||||| Sbjct: 61205 gaaatgaggcagctccaattca 61184
>gb|AC087474.9| Homo sapiens chromosome 15, clone RP11-350A1, complete sequence Length = 185221 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 330 tgaaatctgtttccatggctaaattt 355 ||||| |||||||||||||||||||| Sbjct: 58993 tgaaacctgtttccatggctaaattt 58968
>emb|CR388135.16| Zebrafish DNA sequence from clone CH211-152C12 in linkage group 19, complete sequence Length = 159848 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2152 ttattattattactgctaccagtactacta 2181 |||||||||||||| |||||| |||||||| Sbjct: 54738 ttattattattactactaccactactacta 54709
>gb|AC087795.5|AC087795 Genomic Sequence for Mus musculus, clone RP23-181H5, complete sequence Length = 220811 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2659 cttgtgacatcacaggcaacaa 2680 |||||||||||||||||||||| Sbjct: 103255 cttgtgacatcacaggcaacaa 103276
>gb|AC156400.9| Mus musculus 6 BAC RP24-299B14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 158629 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1956 gaaatgaggcagctccaattca 1977 |||||||||||||||||||||| Sbjct: 151768 gaaatgaggcagctccaattca 151747
>gb|AC103879.4| Homo sapiens BAC clone RP11-140M13 from 4, complete sequence Length = 27927 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 717 accagaatgattataagaaaag 738 |||||||||||||||||||||| Sbjct: 22712 accagaatgattataagaaaag 22733
>gb|AC016142.22| Homo sapiens 3 BAC RP11-166N6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 96959 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 330 tgaaatctgtttccatggctaaattt 355 |||||||||||| ||||||||||||| Sbjct: 80759 tgaaatctgtttacatggctaaattt 80734
>gb|BC091647.1| Mus musculus ankyrin repeat and KH domain containing 1, mRNA (cDNA clone IMAGE:30615997), partial cds Length = 3676 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2659 cttgtgacatcacaggcaacaa 2680 |||||||||||||||||||||| Sbjct: 997 cttgtgacatcacaggcaacaa 1018
>gb|AC092939.8| Homo sapiens 3 BAC RP11-791G22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167152 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2154 attattattactgctaccagtactactact 2183 |||||||||||| |||||| |||||||||| Sbjct: 112948 attattattactactaccattactactact 112977
>emb|AL805950.11| Mouse DNA sequence from clone RP23-134I15 on chromosome 2, complete sequence Length = 237337 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2154 attattattactgctaccagtactactact 2183 |||||||||||| |||||| |||||||||| Sbjct: 10261 attattattactactaccactactactact 10290
>emb|AL772239.8| Mouse DNA sequence from clone RP23-179O4 on chromosome 2, complete sequence Length = 233097 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 403 tagagaaatatttttcaaggaatgggattc 432 |||| |||||||||||||||||| |||||| Sbjct: 171386 tagaaaaatatttttcaaggaattggattc 171415
>emb|AJ315087.1|MFA315087 Multidentia fanshawei internal transcribed spacer 1 (ITS1), 5.8S rRNA gene and internal transcribed spacer 2 (ITS2) Length = 636 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 142 gcgggcgatggcgagccgggtgaaggagga 171 ||||||||||||| |||||| ||||||||| Sbjct: 120 gcgggcgatggcgcgccgggggaaggagga 91 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 608,989,339 Number of extensions: 35618795 Number of successful extensions: 188679 Number of sequences better than 10.0: 78 Number of HSP's gapped: 188653 Number of HSP's successfully gapped: 160 Length of query: 3231 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 3208 Effective length of database: 18,503,978,556 Effective search space: 59360763207648 Effective search space used: 59360763207648 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
