ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf74m01 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os07g34610:12007.t03136:unspliced-genomic oral cancer overexpressed protein 1, putative, expressed| Length = 2164 Score = 264 bits (570), Expect = 7e-70 Identities = 107/139 (76%), Positives = 125/139 (89%) Frame = +1 / +3 Query: 103 DFLEPALALDETHYHEGYRNGYDDGLVSGKEEGRQVGLKNGFQVGEELGFYQGCLDVWMS 282 DFLEP++ LDETHY G++NGY +GLVSGKEEGRQVGLKNGFQVGEELGFYQGCLDVW S Sbjct: 1431 DFLEPSVLLDETHYQTGFKNGYSEGLVSGKEEGRQVGLKNGFQVGEELGFYQGCLDVWTS 1610 Query: 283 IIRLDQDAFSARVRKYIEQLAALVSNYPLSDPEDEQLQGMMREIRLKFSVITGSLGAKLG 462 ++ +DQDAFSARVRK IEQLAAL+ +YPLS+PEDEQ+Q +M +IRLKF VIT SLG KL Sbjct: 1611 LVSIDQDAFSARVRKNIEQLAALLRSYPLSNPEDEQVQDIMEKIRLKFRVITASLGTKLE 1790 Query: 463 YEGRPTSSEQDIEDM*LV* 519 Y+GRPTSS+QD+ED+*LV* Sbjct: 1791 YQGRPTSSKQDVEDL*LV* 1847 Score = 184 bits (396), Expect = 7e-46 Identities = 87/150 (58%), Positives = 106/150 (70%) Frame = -1 / -3 Query: 519 LNKLHILNVLLR*CGATFIPQFCS*ASCDNAEFQPYLPHHALKLLILWIRQRIVAHKCS* 340 LN L ILN+LL *C AT I QFC+* CDN EFQ YL H+ L LL+ W+RQRI + +CS* Sbjct: 1847 LN*LQILNILLG*CRATLILQFCT*TCCDNPEFQSYLLHYILNLLVFWVRQRIASQQCS* 1668 Query: 339 LLYVFPHTS*ECILIEANY*HPHIQAALIESQFFAYLETIL*ANLPPLFLSRYQAIIIPI 160 LL VFP S*ECILI N P+IQ +LI++ FF YL+TIL* NLP LF SR+QA+ I I Sbjct: 1667 LLNVFPDPS*ECILIN*NQRRPNIQTSLIKT*FFTYLKTIL*TNLPSLFFSRHQALTITI 1488 Query: 159 SITLVIMCLI*G*CWFKKIHGMKQSLIFSI 70 T +I+CLI* WFK+I + + LI I Sbjct: 1487 LETRLIVCLI*EY*WFKEIKIILRFLIHGI 1398 Score = 180 bits (388), Expect = 9e-45 Identities = 90/139 (64%), Positives = 97/139 (69%) Frame = -2 / -1 Query: 518 *TSYISSMSCSDDVGRPSYPNFAPKLPVITLNFSRISLIMPXXXXXXXSDKG*LLTSAAS 339 *TSY SS SC DDVGRP Y +F PKL VITLNFS I I+ D G*LL SAAS Sbjct: 1846 *TSYRSSTSCLDDVGRP*YSSFVPKLAVITLNFSLIFSIIS*TCSSSGFDNG*LLNSAAS 1667 Query: 338 CSMYFLTRAENAS*SRRIIDIHTSKQXXXXXXXXPTWKPFFKPTCLPSSFPDTRPSSYPF 159 CSM+FLTRAENAS*S D+ TS+ PT KPFFKPTCLPSSFPDT+PS PF Sbjct: 1666 CSMFFLTRAENAS*SIETNDVQTSRHP**KPSSSPT*KPFFKPTCLPSSFPDTKPSL*PF 1487 Query: 158 L*PS**CVSSKANAGSRKS 102 L P **CVSSK+ GSRKS Sbjct: 1486 LKPV**CVSSKSTDGSRKS 1430 Score = 161 bits (346), Expect = 6e-39 Identities = 80/138 (57%), Positives = 93/138 (67%) Frame = +3 / +2 Query: 105 FS*TSISLR*DTLSRGL*KWV**WPGIWKGRGEAGWLKEWFPGRRRTGILSGLLGCVDVN 284 F *T +LR*DTLS G +W+** G+WK RG+AGW KEWF GR RT LSG+ GC+DV Sbjct: 1433 FP*TISTLR*DTLSNGFQEWL**GLGVWKRRGKAGWFKEWFSGR*RTRFLSGMSGCLDVV 1612 Query: 285 NSPRSRCILSSCEEIHRATSCTCEQLSFV*SRG*AASRHDEGDTAEIQRYHRKLRSKIGV 464 SRCILSS +E H ATSCT E+LS V R A+SR++ D EIQ YH K R K GV Sbjct: 1613 GFN*SRCILSSGQEKH*ATSCTVEKLSVVEPRRRASSRYNGEDKTEIQGYHSKFRYKTGV 1792 Query: 465 *RSPHII*ARH*GYVACL 518 RSP+II A *G V L Sbjct: 1793 SRSPYIIQAGC*GSVTSL 1846 Score = 155 bits (333), Expect = 4e-37 Identities = 78/139 (56%), Positives = 91/139 (65%) Frame = -3 / -2 Query: 520 SKQATYPQCLAQMMWGDLHTPILLLSFL**R*ISAVSPSSCLEAAHPLDQTKDSCSQVQL 341 +K T PQ A MM GDL TP+L L+ L** *IS +S LE A L T DS S VQL Sbjct: 1848 AKLVTDPQHPAWMM*GDLDTPVLYLNLL**P*ISVLSSPLYLELARLLGSTTDSFSTVQL 1669 Query: 340 VALCISSHELRMHLDRGELLTSTHPSSPDRIPVLRLPGNHSLSQPASPLPFQIPGHHHTH 161 VA C S ELRMHLD+ + TS HP PD+ VL LP NHSL+QPA PL FQ P H+ H Sbjct: 1668 VAQCFS*PELRMHLDQLKPTTSKHPDIPDKNLVLHLPENHSLNQPAFPLLFQTPSPHYNH 1489 Query: 160 FYNPRDNVSHLRLMLVQEN 104 NP D+VSHLR+++VQ N Sbjct: 1488 S*NPFDSVSHLRVLMVQGN 1432 Score = 145 bits (311), Expect = 4e-34 Identities = 78/138 (56%), Positives = 87/138 (63%) Frame = +2 / +1 Query: 104 IFLNQH*P*MRHIITRVIEMGMMMAWYLERKRGGRLA*RMVSR*AKNWDSIRAAWMCGCQ 283 I LN *MRH I RV M ++ AW LE+KR GRL *RMV R* KN IR WM G + Sbjct: 1432 ISLNHQYS*MRHTIKRVSRMVIVRAWCLEKKREGRLV*RMVFR*VKN*VFIRDVWMFGRR 1611 Query: 284 *FASIKMHSQLV*GNT*SN*LHL*ATILCLIQRMSSFKA**GRYG*NSALSQEA*EQNWG 463 F IKMHSQL G T SN*LH * I C Q+ S FK * R *NS LSQ+ * QNW Sbjct: 1612 WFQLIKMHSQLGSGKTLSN*LHC*EAIRCRTQKTSKFKI*WRR*D*NSGLSQQV*VQNWS 1791 Query: 464 MKVAPHHLSKTLRICSLF 517 +KVA HH S+ LRIC+ F Sbjct: 1792 IKVALHHPSRMLRICN*F 1845
>LOC_Os01g64170:12001.t05785:unspliced-genomic glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed| Length = 4979 Score = 36.3 bits (73), Expect = 0.26 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +3 / +1 Query: 387 AASRHDEGDTAEIQRYHRKLR 449 AA RH+ GDTA+ QR HR++R Sbjct: 2056 AADRHEPGDTAQAQRAHRRVR 2118
>LOC_Os03g09850:12003.t00789:unspliced-genomic dopamine beta-monooxygenase, putative, expressed| Length = 1768 Score = 35.9 bits (72), Expect = 0.35 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +3 / -1 Query: 180 GIWKGRGEAGWLKEWFPGRRR 242 G W G G GW + W P RRR Sbjct: 679 GAWCGSGRGGWWRRWSPSRRR 617
>LOC_Os01g03370:12001.t00229:unspliced-genomic senescence-induced receptor-like serine/threonine-protein kinase| precursor, putative Length = 4657 Score = 35.9 bits (72), Expect = 0.35 Identities = 19/47 (40%), Positives = 29/47 (61%) Frame = +2 / +3 Query: 248 DSIRAAWMCGCQ*FASIKMHSQLV*GNT*SN*LHL*ATILCLIQRMS 388 DS+ W C C+ +S++MH L+ +T S+ L L AT + +I RMS Sbjct: 4416 DSL*LKW*CSCKSVSSLRMHVVLLAMHTTSSTLTLGATTI*VITRMS 4556
>LOC_Os09g25860:12009.t02265:unspliced-genomic expressed protein| Length = 7644 Score = 35.0 bits (70), Expect = 0.66 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +2 / +1 Query: 629 FTYCAATGITEDIWSTLDVSNVRCKIFKLERIFGVTLFIIYVVFSFQKKKKN 784 + +C T+ I ST +S++ C IF + +T ++F +QK KKN Sbjct: 1828 YRFCICPKHTKTIISTQALSHIYCFIFCFLKSQSITCSSRLIIFLYQKSKKN 1983
>LOC_Os04g53170:12004.t04789:unspliced-genomic bromodomain containing protein, expressed| Length = 2148 Score = 35.0 bits (70), Expect = 0.66 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +3 / -1 Query: 174 WPGIWKGRGEAGWLKEWFPGRR 239 WP W+ GE GW + W P R Sbjct: 219 WPSRWRAAGEGGWDRNWGPRAR 154
>LOC_Os01g51720:12001.t04603:unspliced-genomic hypothetical protein| Length = 2405 Score = 35.0 bits (70), Expect = 0.66 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = +3 / -1 Query: 180 GIWKGRGEAGWLKEWFPGRRRTGILSGLLG 269 G W+ RG +GW W P RR G G G Sbjct: 194 GAWRRRGASGWTARW*PRRRGAGGARGSRG 105
>LOC_Os07g17710:12007.t01630:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2828 Score = 34.5 bits (69), Expect = 0.91 Identities = 18/51 (35%), Positives = 22/51 (43%) Frame = -3 / +2 Query: 286 LLTSTHPSSPDRIPVLRLPGNHSLSQPASPLPFQIPGHHHTHFYNPRDNVS 134 L HPSSP RLP +L P P P +P + PRD +S Sbjct: 1046 LTGGAHPSSPSSSRSRRLPRALALPLPRIPPPLAVPACNKVGGITPRDPLS 1198
>LOC_Os07g44299:12007.t04070:unspliced-genomic hypothetical protein| Length = 1824 Score = 34.1 bits (68), Expect = 1.3 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -3 / +2 Query: 343 LVALCISSHELRMHLDRGELLTSTHPSSPDRIPVLRLPGNHSLSQPASPL 194 ++A CIS H LDR L + ++ + +P N SL++P SPL Sbjct: 1133 MLAACISRHSSSASLDRRLLA*AEIIELQEKASLSSVPSNISLAKPTSPL 1282
>LOC_Os03g18930:12003.t01660:unspliced-genomic hypothetical protein| Length = 574 Score = 29.0 bits (57), Expect(2) = 1.5 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 / +2 Query: 589 SFLF*FCTYDDVLFHVLCCHWDN 657 S L FC DVL+ VLCC +N Sbjct: 425 SCLHGFCKLGDVLYLVLCCRDEN 493 Score = 24.0 bits (46), Expect(2) = 1.5 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = +3 / +2 Query: 210 WLKEWFPGRRR 242 W KEW P RRR Sbjct: 2 WRKEWRPVRRR 34
>LOC_Os05g52070:12005.t04632:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 14530 Score = 32.2 bits (64), Expect(2) = 1.9 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 / -3 Query: 235 GEELGFYQGCLDVWMSIIRLDQDAFSARVRKYIEQLAALVSNYP 366 G ELGF+ GC +++ RLD +++ KYI A+++ P Sbjct: 989 GIELGFFYGCRITGLTLKRLDLESWCRDREKYIFPNASVLIPVP 858 Score = 24.9 bits (48), Expect(2) = 1.9 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = +3 / -2 Query: 174 WPGIWKGRGEAGW 212 WPG W+ R GW Sbjct: 7011 WPGGWRTRWLTGW 6973 Score = 30.9 bits (61), Expect(2) = 8.0 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = +1 / -1 Query: 235 GEELGFYQGCLDVWMSIIRLDQDAFSAR 318 G ELGF+ GC + +++ RLD ++++ R Sbjct: 5098 GIELGFFYGCRIIGLTLERLDLESWTPR 5015 Score = 24.0 bits (46), Expect(2) = 8.0 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +3 / -3 Query: 189 KGRGEAGWLKEWFPGRRRTG 248 +GRG G L EW G R G Sbjct: 6503 RGRGRPGELWEWEGGAGRRG 6444
>LOC_Os01g12880:12001.t01154:unspliced-genomic VHS and GAT domain protein, putative, expressed| Length = 8181 Score = 25.4 bits (49), Expect(2) = 2.2 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -3 / -2 Query: 283 LTSTHPSSPDRIPVLRLPGNHS 218 L HP P+RI + R+ G++S Sbjct: 536 LAFIHPPPPNRILIFRIEGSNS 471 Score = 24.9 bits (48), Expect(2) = 2.2 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -3 / -2 Query: 193 PFQIPGHHHTHFYNPR 146 P + P HHH H +PR Sbjct: 449 PNEKPHHHHHHHRSPR 402
>LOC_Os06g13050:12006.t01180:unspliced-genomic peroxidase family protein, expressed| Length = 9862 Score = 33.1 bits (66), Expect = 2.4 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +3 / +3 Query: 186 WKGRGEAGWLKEWFPGRRRTGILSGL 263 ++G+ GW + FPGR+RT +L L Sbjct: 4512 FRGQSYGGWFRICFPGRQRTRVLENL 4589
>LOC_Os04g48480:12004.t04365:unspliced-genomic xyloglucan galactosyltransferase KATAMARI 1, putative, expressed| Length = 2110 Score = 33.1 bits (66), Expect = 2.4 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +2 / +2 Query: 695 RCKIFKLERIFGVTLFIIYVVFSFQKKKK 781 +CKI E+I + LF Y +F FQKK+K Sbjct: 1880 KCKILWPEQIKLIILFYTYFLFLFQKKRK 1966
>LOC_Os04g38860:12004.t03456:unspliced-genomic amino acid permease, putative, expressed| Length = 2394 Score = 33.1 bits (66), Expect = 2.4 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -3 / +3 Query: 199 PLPFQIPGHHHTHFYNPRDNVSH 131 P P Q+PG H H +PRD+ H Sbjct: 1287 PRPRQLPGVRHAHLRDPRDDSDH 1355
>LOC_Os04g33140:12004.t02990:unspliced-genomic hypothetical protein| Length = 2288 Score = 33.1 bits (66), Expect = 2.4 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = -3 / -3 Query: 274 THPSSPDRIPVLRLPGNHSLSQPASPLPFQIPGHHHT 164 T+PSS +IP L L + SLS P P P P HH+ Sbjct: 726 TNPSSFPKIPSLSLSLSLSLSAPNPPPPNPHPPPHHS 616
>LOC_Os03g03900:12003.t00271:unspliced-genomic nodule inception protein, putative, expressed| Length = 4629 Score = 30.9 bits (61), Expect(2) = 3.0 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = -3 / -2 Query: 268 PSSPDRIPVLRLPGNHSLSQPASPLPFQIPGHHHTHFYNPR 146 PS P RIP + P S + A+ P HH ++PR Sbjct: 185 PSRPSRIPSIHPPPRRSSAAAAATASAP*PDKHHHQPHSPR 63 Score = 24.0 bits (46), Expect(2) = 3.0 Identities = 7/17 (41%), Positives = 10/17 (58%) Frame = -2 / -2 Query: 473 RPSYPNFAPKLPVITLN 423 +P YPN P ++T N Sbjct: 3740 QPKYPNLKPAYAILTYN 3690
>LOC_Os11g43750:12011.t03905:unspliced-genomic polygalacturonase, putative, expressed| Length = 3913 Score = 32.7 bits (65), Expect = 3.2 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -3 / -3 Query: 370 TKDSCSQVQLVALCISSHELRMHLDRGELLTSTHPSS 260 T ++ Q+QL +CISSH +L +THP S Sbjct: 1133 TTNNSMQMQLKMMCISSHSCHQNLHLTTYNPTTHPES 1023
>LOC_Os06g17000:12006.t01573:unspliced-genomic polygalacturonase-1 non-catalytic beta subunit precursor, putative,| expressed Length = 2061 Score = 32.7 bits (65), Expect = 3.3 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 / +1 Query: 142 YHEGYRNGYDDGLVSGKEEGRQVGLKNGFQVGEELGFYQGCL 267 Y + Y NGYD G ++G G NG+ L F + L Sbjct: 985 YDQVYGNGYDGGYINGYSHSYSNGYSNGYFHKANLHFLEDAL 1110
>LOC_Os02g50740:12002.t04658:unspliced-genomic nucleotide binding protein, putative, expressed| Length = 1544 Score = 27.6 bits (54), Expect(2) = 3.3 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = +3 / +3 Query: 240 RTGILSGLLGCVDVNNSPRSRC 305 R+G G GC SPRSRC Sbjct: 687 RSGGTGGAPGCTTWTRSPRSRC 752 Score = 22.1 bits (42), Expect(2) = 3.3 Identities = 4/14 (28%), Positives = 10/14 (71%) Frame = +2 / +2 Query: 71 IENIRLCFIPWIFL 112 ++ +R C +PW ++ Sbjct: 644 VDRLRTCLLPWSYV 685
>LOC_Os11g25920:12011.t02209:unspliced-genomic EMB1444, putative, expressed| Length = 4713 Score = 32.2 bits (64), Expect = 4.5 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +3 / +3 Query: 621 CSVSRIVLPLG*RRISGAL*MYLTSAAKSSNLRGFLGSRCS 743 C+VS + PLG R +S L + + SA+ S GFL S S Sbjct: 864 CTVSSVFCPLGSRGVSRRLDLVVMSASLSHRSCGFLRSTVS 986
>LOC_Os10g24910:12010.t01916:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4742 Score = 32.2 bits (64), Expect = 4.5 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +2 / -1 Query: 626 CFTYCAATGITEDIWSTLDVS 688 CFT+C +TG + +W T+ +S Sbjct: 3212 CFTFCTSTGRSCSLWRTISIS 3150
>LOC_Os09g19900:12009.t01724:unspliced-genomic THO complex subunit 6, putative, expressed| Length = 3687 Score = 32.2 bits (64), Expect = 4.5 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -3 / +1 Query: 280 TSTHPSSPDRIPVLRLPGNHSLSQPASPLPFQIPGHHHTHFYNP 149 T+T P+S P P S S PASP P IP H +P Sbjct: 211 TTTTPTSSSPPPPATAPSPPSPSPPASPPPPPIPPHRFVRSPHP 342
>LOC_Os09g10890:12009.t00879:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5244 Score = 32.2 bits (64), Expect = 4.5 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +2 / -1 Query: 626 CFTYCAATGITEDIWSTLDVS 688 CFT+C +TG + +W T+ +S Sbjct: 3585 CFTFCTSTGRSCSLWRTISIS 3523
>LOC_Os06g37400:12006.t03435:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10240 Score = 32.2 bits (64), Expect = 4.5 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +2 / -3 Query: 626 CFTYCAATGITEDIWSTLDVS 688 CFT+C +TG + +W T+ +S Sbjct: 8564 CFTFCTSTGRSCSLWRTISIS 8502
>LOC_Os04g55360:12004.t05009:unspliced-genomic ubiquitin carboxyl-terminal hydrolase 22, putative, expressed| Length = 4058 Score = 32.2 bits (64), Expect = 4.5 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -3 / +3 Query: 274 THPSSPDRIPVLRLPGNHSLSQPASPLPFQIPGHHHTH 161 +H + IP + P +H + A P P ++P HH H Sbjct: 33 SHSRAHRLIPHIHRPDDHPVRAAAVPAPRRVPPHHALH 146
>LOC_Os04g36070:12004.t03277:unspliced-genomic OsRR1 - Rice type-A response regulator, expressed| Length = 3849 Score = 32.2 bits (64), Expect = 4.5 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = -2 / -2 Query: 212 PTCLPSSFPDTRPSSYPFL*PS 147 P+C P+S P PSS PFL PS Sbjct: 428 PSCPPASRPPAAPSSPPFLLPS 363
>LOC_Os03g04020:12003.t00283:unspliced-genomic expansin-like 3 precursor, putative, expressed| Length = 2175 Score = 32.2 bits (64), Expect = 4.5 Identities = 13/34 (38%), Positives = 13/34 (38%) Frame = -3 / -1 Query: 232 PGNHSLSQPASPLPFQIPGHHHTHFYNPRDNVSH 131 P L PLP GHH H PR V H Sbjct: 1389 PPRQDLPVGPHPLPVVAAGHHQPHLQRPRRRVRH 1288
>LOC_Os10g22230:12010.t01706:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1388 Score = 32.2 bits (64), Expect = 4.5 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +1 / +1 Query: 442 SLGAKLGYEGRPTSSEQDIED 504 SLG K G EG PT E++IED Sbjct: 544 SLGKKKGEEGAPTQIEEEIED 606
>LOC_Os09g25690:12009.t02248:unspliced-genomic conserved hypothetical protein| Length = 798 Score = 32.2 bits (64), Expect = 4.5 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 / +1 Query: 142 YHEGYRNGYDDGLVSGKEEGRQVGLKNGFQVGEELGFYQG 261 Y EG+ +G+ G SG EG G NG+ G G+ +G Sbjct: 643 YGEGHGSGHGQGSGSGYGEGYGKGSGNGYGNGSGSGYGEG 762
>LOC_Os08g10580:12008.t04264:unspliced-genomic methyl-CpG binding domain containing protein, expressed| Length = 5031 Score = 32.2 bits (64), Expect = 4.5 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 / +3 Query: 409 EIRLKFSVITGSLGAKLGYEGRPTSS 486 ++ L FSV + + GA+ GY+GRP S Sbjct: 4299 QLNLHFSVPSVTFGARCGYDGRPAPS 4376
>LOC_Os01g68070:12001.t06164:unspliced-genomic expressed protein| Length = 3139 Score = 26.3 bits (51), Expect(2) = 5.7 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = +3 / -2 Query: 180 GIWKGRGEAGW 212 G W GRG AGW Sbjct: 255 GEWAGRGRAGW 223 Score = 22.6 bits (43), Expect(2) = 5.7 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +3 / -3 Query: 231 GRRRTGILSGLL 266 GRRR G L GLL Sbjct: 224 GRRRRGALGGLL 189
>LOC_Os12g31748:12012.t02877:unspliced-genomic MADS-box trancription factor 20, putative, expressed| Length = 9197 Score = 31.8 bits (63), Expect = 6.1 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 / +2 Query: 256 DRIPVLRLPGNHSLSQPASPLPFQIPGHHHTHFY 155 DR P+ R H L + PLP ++ HH H++ Sbjct: 86 DRRPLRRRRRRHRLLRQGQPLPLRLLPHHVRHYH 187
>LOC_Os04g57970:12004.t05261:unspliced-genomic expressed protein| Length = 2351 Score = 31.8 bits (63), Expect = 6.1 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = +3 / -1 Query: 177 PGIWKGRGEAGWLKEWFPGRRR 242 P W G A W W PGRRR Sbjct: 788 PARWPGASSA*WRSTWRPGRRR 723
>LOC_Os01g71050:12001.t06402:unspliced-genomic VAP27-2, putative, expressed| Length = 5328 Score = 31.8 bits (63), Expect = 6.1 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +2 / -1 Query: 584 QYRFSFDFVLMMMFCFTYCAATGITEDIWSTLDVSN 691 Q R SF + +FC YC A IW + VSN Sbjct: 1548 QVRLSFKTLRRNVFCILYCTAVKHISIIWLNVVVSN 1441
>LOC_Os03g28140:12003.t02487:unspliced-genomic 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding| protein, putative, expressed Length = 10728 Score = 31.8 bits (63), Expect = 6.2 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -1 / +3 Query: 666 ISSVIPVAAQYVKQNIIISTKSKEKRYW 583 I+ IPV ++YV Q +ISTK+ ++ W Sbjct: 3177 IAESIPVTSKYVTQPTVISTKA*SRKSW 3260
>LOC_Os01g65500:12001.t05914:unspliced-genomic chloride channel protein CLC-c, putative, expressed| Length = 4662 Score = 26.7 bits (52), Expect(2) = 7.4 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +2 / +1 Query: 572 DIWCQYRFSFDFVLMMMFCF 631 D W +Y FS FV M CF Sbjct: 1123 DSWYRYLFSIRFVSMFHVCF 1182 Score = 26.7 bits (52), Expect(2) = 7.4 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 / +1 Query: 637 LCCHWDNGGYLEHS 678 LCC + GYLEHS Sbjct: 2851 LCCSPSSAGYLEHS 2892
>LOC_Os10g07190:12010.t00580:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3831 Score = 31.3 bits (62), Expect = 8.4 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +2 / -1 Query: 626 CFTYCAATGITEDIWSTLDVS 688 CFT+C TG + +W T+ +S Sbjct: 3540 CFTFCTLTGRSCSLWRTISIS 3478
>LOC_Os04g42980:12004.t03844:unspliced-genomic protein binding protein, putative, expressed| Length = 5329 Score = 31.3 bits (62), Expect = 8.4 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -2 / -1 Query: 488 SDDVGRPSYPNFAPKLPVITL 426 S+ VGRP+YP+F P P I L Sbjct: 5224 SNTVGRPNYPHFHPLYPQILL 5162
>LOC_Os02g56750:12002.t05247:unspliced-genomic ATPP2-B1, putative, expressed| Length = 2391 Score = 31.3 bits (62), Expect = 8.4 Identities = 16/37 (43%), Positives = 17/37 (45%) Frame = -3 / -1 Query: 283 LTSTHPSSPDRIPVLRLPGNHSLSQPASPLPFQIPGH 173 LTST PSSP P + SL P P P GH Sbjct: 1881 LTSTTPSSPPAAGTANSPSSTSLHPPPPPPPSLGRGH 1771
>LOC_Os02g10120:12002.t00859:unspliced-genomic lipoxygenase 2.3, chloroplast precursor, putative, expressed| Length = 6007 Score = 31.3 bits (62), Expect = 8.4 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = -3 / +3 Query: 271 HPSSPDRIPVLRLPGNHSLSQPASPLPFQIPGHHHTH 161 HP P R+P LR P + A LP + H H Sbjct: 4362 HPGLPRRVPPLRAPRPRAAGDDALRLPHGVLPHRRRH 4472
>LOC_Os01g66970:12001.t06055:unspliced-genomic zinc finger protein, putative, expressed| Length = 4416 Score = 31.3 bits (62), Expect = 8.4 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = -3 / -3 Query: 271 HPSSPDRIPVLRLPGNHSLSQPASPLPFQIPGHHHTH 161 HP P L P S S P P P + HHH H Sbjct: 451 HPLPPGISGTLSFPSRPSPSPPRPPPPPDLLHHHHHH 341 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 324,993,359 Number of extensions: 5346168 Number of successful extensions: 21874 Number of sequences better than 10.0: 42 Length of query: 262 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 213 Effective length of database: 52,856,264 Effective search space: 11258384232 Effective search space used: 11258384232 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
