ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf68e01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001052618.1| Oryza sativa (japonica cultivar-group) Os02g0179300 (Os02g0179300) mRNA, complete cds Length = 1674 Score = 426 bits (215), Expect = e-115 Identities = 402/463 (86%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 908 tctggaatcccaaacacagcaccgttggatcttttcccgcagggggcttcccatgctgga 967 |||||||| |||||| || | ||||| |||||||||| ||||| | | | ||| |||| Sbjct: 890 tctggaattccaaacgcatccccgttaaatcttttcccacagggcgatgcaaatgatgga 949 Query: 968 ggtgctgctggtggtggatcacttgattttcttcgaaataaccaacagtttcaagcactt 1027 |||| ||||||||||||| ||||||| || ||| || |||||||||||||||| || ||| Sbjct: 950 ggtggtgctggtggtggaacacttgagttccttagacataaccaacagtttcaggcgctt 1009 Query: 1028 cgggaaatggtccatacaaatccacaaattttacagcctatgctccaggaattgagcaag 1087 ||||||||||| ||||| || |||||||| || |||||||||||||||||| |||||||| Sbjct: 1010 cgggaaatggttcatactaacccacaaatattgcagcctatgctccaggaactgagcaag 1069 Query: 1088 cagaatcctcaacttctaaggttgattcaggagaacaatgatgagt-ccttcagttacta 1146 |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||| || Sbjct: 1070 aagaatcctcaacttctgaggttgattcaggagaaccatgatgagttccttcagttaata 1129 Query: 1147 aatgagacatttgaaggcggcgatggggacttcttagaccaggctgaccaggatgaaatg 1206 |||||| | ||||| || | |||||||||||||||||||| ||||||||||||| ||| Sbjct: 1130 aatgagccctttgatggtgctgatggggacttcttagaccaacctgaccaggatgagatg 1189 Query: 1207 cctcatgctatcagtgtgacaccagaagagcaagaggcaattggaaggttggaagccatg 1266 || ||| |||||| ||| ||||| |||||||||||||| |||||| || | |||| |||| Sbjct: 1190 ccccattctatcaatgtcacacctgaagagcaagaggcgattggacggcttgaaggcatg 1249 Query: 1267 gggtttgagagagcacgtgtcatcgaagcattcttcgcctgtgacaggaatgagcaactc 1326 || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1250 ggatttgacagagcacgtgtcatcgaagcattcttcgcctgtgacaggaacgagcaactc 1309 Query: 1327 gctgcaaactatcttcttgagcatgctggtgacgaagaataga 1369 || ||||| || |||||||| ||||||| ||| ||||| |||| Sbjct: 1310 gcagcaaattaccttcttgaacatgctgctgatgaagattaga 1352 Score = 315 bits (159), Expect = 3e-82 Identities = 237/263 (90%) Strand = Plus / Plus Query: 256 cggcgccgccatgaagctgacggtgaagactctcaagggcacccacttcgagatccgggt 315 ||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 232 cggcggcgccatgaagctgacggtgaagaccctcaagggcacccagttcgagatccgggt 291 Query: 316 ccagcacaatgacaccattatggctgtcaagaagaacattgaagagattcaaggaaagga 375 |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 292 gcagcccaacgacaccattatggctgtcaagaagatcattgaagagatacaaggaaagga 351 Query: 376 tagttatccatggggtcaacaactactgattcacaatggcaaggttttgaaggatgaaag 435 ||| || |||||||| ||||| | |||||||||||||||||||||||||| |||||||| Sbjct: 352 tagctacccatggggccaacagttgctgattcacaatggcaaggttttgaaagatgaaag 411 Query: 436 cacattggatgagaatcaagttggcgaagctggatttctagttgtcatgcttagtaagag 495 |||||||| ||||| |||| | |||| ||| ||| |||||||||||||||||||||| Sbjct: 412 tacattggaagagaacaaagtcagtgaagttgggtttttagttgtcatgcttagtaagag 471 Query: 496 taaagcttctgcttccagtggag 518 ||||||||||| ||||||||||| Sbjct: 472 taaagcttctggttccagtggag 494 Score = 153 bits (77), Expect = 2e-33 Identities = 164/193 (84%) Strand = Plus / Plus Query: 684 tgtcaggaagcaatctggacacaatgattaaccagataatggagatggggggtggcagtt 743 |||| ||||||||||| ||||| | |||||||||| | ||||| ||||| |||||||||| Sbjct: 663 tgtcgggaagcaatcttgacactacgattaaccagctgatggaaatgggtggtggcagtt 722 Query: 744 gggatagagataaggtccaaagagctctccgtgcagcctataacaatccagaacgtgcca 803 |||| |||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 723 gggacagagataaagtccaaagagctctacgtgcagcttataacaacccagagcgtgctg 782 Query: 804 ttgactatctgtactctggtattcccgtgacagccgaagttgctgttccggtggttggtc 863 |||| ||||| || ||||| ||||| | ||||| || ||||||||||| | | ||||| Sbjct: 783 ttgaatatctatattctggcattccaattacagcggaggttgctgttccagcaggtggtc 842 Query: 864 aaggggcaaacac 876 ||||||||||||| Sbjct: 843 aaggggcaaacac 855
>dbj|AK104908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-H06, full insert sequence Length = 1179 Score = 426 bits (215), Expect = e-115 Identities = 402/463 (86%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 908 tctggaatcccaaacacagcaccgttggatcttttcccgcagggggcttcccatgctgga 967 |||||||| |||||| || | ||||| |||||||||| ||||| | | | ||| |||| Sbjct: 444 tctggaattccaaacgcatccccgttaaatcttttcccacagggcgatgcaaatgatgga 503 Query: 968 ggtgctgctggtggtggatcacttgattttcttcgaaataaccaacagtttcaagcactt 1027 |||| ||||||||||||| ||||||| || ||| || |||||||||||||||| || ||| Sbjct: 504 ggtggtgctggtggtggaacacttgagttccttagacataaccaacagtttcaggcgctt 563 Query: 1028 cgggaaatggtccatacaaatccacaaattttacagcctatgctccaggaattgagcaag 1087 ||||||||||| ||||| || |||||||| || |||||||||||||||||| |||||||| Sbjct: 564 cgggaaatggttcatactaacccacaaatattgcagcctatgctccaggaactgagcaag 623 Query: 1088 cagaatcctcaacttctaaggttgattcaggagaacaatgatgagt-ccttcagttacta 1146 |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||| || Sbjct: 624 aagaatcctcaacttctgaggttgattcaggagaaccatgatgagttccttcagttaata 683 Query: 1147 aatgagacatttgaaggcggcgatggggacttcttagaccaggctgaccaggatgaaatg 1206 |||||| | ||||| || | |||||||||||||||||||| ||||||||||||| ||| Sbjct: 684 aatgagccctttgatggtgctgatggggacttcttagaccaacctgaccaggatgagatg 743 Query: 1207 cctcatgctatcagtgtgacaccagaagagcaagaggcaattggaaggttggaagccatg 1266 || ||| |||||| ||| ||||| |||||||||||||| |||||| || | |||| |||| Sbjct: 744 ccccattctatcaatgtcacacctgaagagcaagaggcgattggacggcttgaaggcatg 803 Query: 1267 gggtttgagagagcacgtgtcatcgaagcattcttcgcctgtgacaggaatgagcaactc 1326 || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 804 ggatttgacagagcacgtgtcatcgaagcattcttcgcctgtgacaggaacgagcaactc 863 Query: 1327 gctgcaaactatcttcttgagcatgctggtgacgaagaataga 1369 || ||||| || |||||||| ||||||| ||| ||||| |||| Sbjct: 864 gcagcaaattaccttcttgaacatgctgctgatgaagattaga 906 Score = 153 bits (77), Expect = 2e-33 Identities = 164/193 (84%) Strand = Plus / Plus Query: 684 tgtcaggaagcaatctggacacaatgattaaccagataatggagatggggggtggcagtt 743 |||| ||||||||||| ||||| | |||||||||| | ||||| ||||| |||||||||| Sbjct: 217 tgtcgggaagcaatcttgacactacgattaaccagctgatggaaatgggtggtggcagtt 276 Query: 744 gggatagagataaggtccaaagagctctccgtgcagcctataacaatccagaacgtgcca 803 |||| |||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 277 gggacagagataaagtccaaagagctctacgtgcagcttataacaacccagagcgtgctg 336 Query: 804 ttgactatctgtactctggtattcccgtgacagccgaagttgctgttccggtggttggtc 863 |||| ||||| || ||||| ||||| | ||||| || ||||||||||| | | ||||| Sbjct: 337 ttgaatatctatattctggcattccaattacagcggaggttgctgttccagcaggtggtc 396 Query: 864 aaggggcaaacac 876 ||||||||||||| Sbjct: 397 aaggggcaaacac 409 Score = 81.8 bits (41), Expect = 7e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 474 tagttgtcatgcttagtaagagtaaagcttctgcttccagtggag 518 ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4 tagttgtcatgcttagtaagagtaaagcttctggttccagtggag 48
>dbj|AK069065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007H17, full insert sequence Length = 1675 Score = 426 bits (215), Expect = e-115 Identities = 402/463 (86%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 908 tctggaatcccaaacacagcaccgttggatcttttcccgcagggggcttcccatgctgga 967 |||||||| |||||| || | ||||| |||||||||| ||||| | | | ||| |||| Sbjct: 891 tctggaattccaaacgcatccccgttaaatcttttcccacagggcgatgcaaatgatgga 950 Query: 968 ggtgctgctggtggtggatcacttgattttcttcgaaataaccaacagtttcaagcactt 1027 |||| ||||||||||||| ||||||| || ||| || |||||||||||||||| || ||| Sbjct: 951 ggtggtgctggtggtggaacacttgagttccttagacataaccaacagtttcaggcgctt 1010 Query: 1028 cgggaaatggtccatacaaatccacaaattttacagcctatgctccaggaattgagcaag 1087 ||||||||||| ||||| || |||||||| || |||||||||||||||||| |||||||| Sbjct: 1011 cgggaaatggttcatactaacccacaaatattgcagcctatgctccaggaactgagcaag 1070 Query: 1088 cagaatcctcaacttctaaggttgattcaggagaacaatgatgagt-ccttcagttacta 1146 |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||| || Sbjct: 1071 aagaatcctcaacttctgaggttgattcaggagaaccatgatgagttccttcagttaata 1130 Query: 1147 aatgagacatttgaaggcggcgatggggacttcttagaccaggctgaccaggatgaaatg 1206 |||||| | ||||| || | |||||||||||||||||||| ||||||||||||| ||| Sbjct: 1131 aatgagccctttgatggtgctgatggggacttcttagaccaacctgaccaggatgagatg 1190 Query: 1207 cctcatgctatcagtgtgacaccagaagagcaagaggcaattggaaggttggaagccatg 1266 || ||| |||||| ||| ||||| |||||||||||||| |||||| || | |||| |||| Sbjct: 1191 ccccattctatcaatgtcacacctgaagagcaagaggcgattggacggcttgaaggcatg 1250 Query: 1267 gggtttgagagagcacgtgtcatcgaagcattcttcgcctgtgacaggaatgagcaactc 1326 || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1251 ggatttgacagagcacgtgtcatcgaagcattcttcgcctgtgacaggaacgagcaactc 1310 Query: 1327 gctgcaaactatcttcttgagcatgctggtgacgaagaataga 1369 || ||||| || |||||||| ||||||| ||| ||||| |||| Sbjct: 1311 gcagcaaattaccttcttgaacatgctgctgatgaagattaga 1353 Score = 315 bits (159), Expect = 3e-82 Identities = 237/263 (90%) Strand = Plus / Plus Query: 256 cggcgccgccatgaagctgacggtgaagactctcaagggcacccacttcgagatccgggt 315 ||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 233 cggcggcgccatgaagctgacggtgaagaccctcaagggcacccagttcgagatccgggt 292 Query: 316 ccagcacaatgacaccattatggctgtcaagaagaacattgaagagattcaaggaaagga 375 |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 293 gcagcccaacgacaccattatggctgtcaagaagatcattgaagagatacaaggaaagga 352 Query: 376 tagttatccatggggtcaacaactactgattcacaatggcaaggttttgaaggatgaaag 435 ||| || |||||||| ||||| | |||||||||||||||||||||||||| |||||||| Sbjct: 353 tagctacccatggggccaacagttgctgattcacaatggcaaggttttgaaagatgaaag 412 Query: 436 cacattggatgagaatcaagttggcgaagctggatttctagttgtcatgcttagtaagag 495 |||||||| ||||| |||| | |||| ||| ||| |||||||||||||||||||||| Sbjct: 413 tacattggaagagaacaaagtcagtgaagttgggtttttagttgtcatgcttagtaagag 472 Query: 496 taaagcttctgcttccagtggag 518 ||||||||||| ||||||||||| Sbjct: 473 taaagcttctggttccagtggag 495 Score = 153 bits (77), Expect = 2e-33 Identities = 164/193 (84%) Strand = Plus / Plus Query: 684 tgtcaggaagcaatctggacacaatgattaaccagataatggagatggggggtggcagtt 743 |||| ||||||||||| ||||| | |||||||||| | ||||| ||||| |||||||||| Sbjct: 664 tgtcgggaagcaatcttgacactacgattaaccagctgatggaaatgggtggtggcagtt 723 Query: 744 gggatagagataaggtccaaagagctctccgtgcagcctataacaatccagaacgtgcca 803 |||| |||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 724 gggacagagataaagtccaaagagctctacgtgcagcttataacaacccagagcgtgctg 783 Query: 804 ttgactatctgtactctggtattcccgtgacagccgaagttgctgttccggtggttggtc 863 |||| ||||| || ||||| ||||| | ||||| || ||||||||||| | | ||||| Sbjct: 784 ttgaatatctatattctggcattccaattacagcggaggttgctgttccagcaggtggtc 843 Query: 864 aaggggcaaacac 876 ||||||||||||| Sbjct: 844 aaggggcaaacac 856
>gb|AY104681.1| Zea mays PCO142077 mRNA sequence Length = 919 Score = 375 bits (189), Expect = e-100 Identities = 358/413 (86%), Gaps = 1/413 (0%) Strand = Plus / Plus Query: 953 gcttcccatgctggaggtgctgctggtggtggatcacttgattttcttcgaaataaccaa 1012 |||||| |||||||||||| ||||||||||||| |||||||||||||| |||| || | | Sbjct: 1 gcttccaatgctggaggtggtgctggtggtggaccacttgattttcttagaaacaatcca 60 Query: 1013 cagtttcaagcacttcgggaaatggtccatacaaatccacaaattttacagcctatgctc 1072 |||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 61 cagtttcaagcagttagggaaatggtccatacaaatccacaaattttgcagcctatgctc 120 Query: 1073 caggaattgagcaagcagaatcctcaacttctaaggttgattcaggagaacaatgatgag 1132 || ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| Sbjct: 121 gttgagttgagcaagcagaatcctcaaattctaaggttgattgaggagaatcatgatgag 180 Query: 1133 -tccttcagttactaaatgagacatttgaaggcggcgatggggacttcttagaccaggct 1191 | |||||||||||||||||| | ||||||||||| || ||||| ||||||||||| || Sbjct: 181 tttcttcagttactaaatgagccctttgaaggcggagagggggatttcttagaccaacct 240 Query: 1192 gaccaggatgaaatgcctcatgctatcagtgtgacaccagaagagcaagaggcaattgga 1251 || |||||||||||||||| || || ||||| |||||||| ||||| ||||| |||||| Sbjct: 241 gaggaggatgaaatgcctcacgccattagtgttacaccagaggagcaggaggccattgga 300 Query: 1252 aggttggaagccatggggtttgagagagcacgtgtcatcgaagcattcttcgcctgtgac 1311 || | || |||||||||| || |||||||| || |||||||||||||| ||||| || Sbjct: 301 cggcttgagtccatggggttcgacagagcacgcgttatcgaagcattcttagcctgcgat 360 Query: 1312 aggaatgagcaactcgctgcaaactatcttcttgagcatgctggtgacgaaga 1364 ||||| ||| | || || ||||||||||| ||||||||||||||||| ||||| Sbjct: 361 aggaacgaggagctagcagcaaactatctccttgagcatgctggtgaggaaga 413
>gb|AY106685.1| Zea mays PCO142076 mRNA sequence Length = 769 Score = 220 bits (111), Expect = 1e-53 Identities = 243/287 (84%) Strand = Plus / Plus Query: 262 cgccatgaagctgacggtgaagactctcaagggcacccacttcgagatccgggtccagca 321 |||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 174 cgccatgaagctgacggtgaagaccctcaagggaacgcacttcgagatccgggtgcagcc 233 Query: 322 caatgacaccattatggctgtcaagaagaacattgaagagattcaaggaaaggatagtta 381 ||| ||||| ||||||||||| |||||||| || |||||||| ||||| || || || || Sbjct: 234 caacgacacgattatggctgtgaagaagaatatagaagagatacaagggaaagacagcta 293 Query: 382 tccatggggtcaacaactactgattcacaatggcaaggttttgaaggatgaaagcacatt 441 ||||||||| |||||||| |||||| |||||| ||||| ||||| |||||||| ||||| Sbjct: 294 tccatggggccaacaactgctgattttcaatggaaaggtcttgaaagatgaaagtacatt 353 Query: 442 ggatgagaatcaagttggcgaagctggatttctagttgtcatgcttagtaagagtaaagc 501 ||| |||||| |||| || | ||| |||||||||||||||||||||||| ||||| | Sbjct: 354 ggaagagaataaagtcaatgaggatgggtttctagttgtcatgcttagtaagggtaaaac 413 Query: 502 ttctgcttccagtggaggttcatctgcccagccttcaagcactcctg 548 |||| ||| | |||| ||||||| |||||| |||| |||||||| Sbjct: 414 atctggttcaactggaacttcatcttcccagcactcaaacactcctg 460 Score = 60.0 bits (30), Expect = 3e-05 Identities = 122/149 (81%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 683 ctgtcaggaagcaatctggacacaatgattaaccagataatggagatggg-gggtggcag 741 ||||| ||||| ||| | |||||||| ||||||||| ||||||||||||| || |||| Sbjct: 595 ctgtctggaaggaatgttgacacaataattaaccagctaatggagatgggttgggggcaa 654 Query: 742 ttgggatagagataaggt-ccaaagagctctccg-tgcagcctataacaatccagaacgt 799 |||||| | |||||| || |||||| |||||||| ||| || || ||||| || |||||| Sbjct: 655 ttgggacaaagataaagtcccaaagggctctccgttgccgcttacaacaaccccgaacgt 714 Query: 800 gccattgactatctgtactctggtattcc 828 || |||| || || |||||||||| ||| Sbjct: 715 gctgttgaatacctctactctggtantcc 743
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 170 bits (86), Expect = 1e-38 Identities = 143/162 (88%) Strand = Plus / Plus Query: 332 attatggctgtcaagaagaacattgaagagattcaaggaaaggatagttatccatggggt 391 ||||||||||||||||||| |||||||||||| |||||||||||||| || |||||||| Sbjct: 4408935 attatggctgtcaagaagatcattgaagagatacaaggaaaggatagctacccatggggc 4408994 Query: 392 caacaactactgattcacaatggcaaggttttgaaggatgaaagcacattggatgagaat 451 ||||| | |||||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 4408995 caacagttgctgattcacaatggcaaggttttgaaagatgaaagtacattggaagagaac 4409054 Query: 452 caagttggcgaagctggatttctagttgtcatgcttagtaag 493 |||| | |||| ||| ||| |||||||||||||||||||| Sbjct: 4409055 aaagtcagtgaagttgggtttttagttgtcatgcttagtaag 4409096 Score = 135 bits (68), Expect = 6e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 1258 gaagccatggggtttgagagagcacgtgtcatcgaagcattcttcgcctgtgacaggaat 1317 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4412235 gaaggcatgggatttgacagagcacgtgtcatcgaagcattcttcgcctgtgacaggaac 4412294 Query: 1318 gagcaactcgctgcaaactatcttcttgagcatgctggtgacgaagaataga 1369 ||||||||||| ||||| || |||||||| ||||||| ||| ||||| |||| Sbjct: 4412295 gagcaactcgcagcaaattaccttcttgaacatgctgctgatgaagattaga 4412346 Score = 127 bits (64), Expect = 1e-25 Identities = 86/92 (93%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 1062 agcctatgctccaggaattgagcaagcagaatcctcaacttctaaggttgattcaggaga 1121 ||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| Sbjct: 4411652 agcctatgctccaggaactgagcaagaagaatcctcaacttctgaggttgattcaggaga 4411711 Query: 1122 acaatgatgag-tccttcagttactaaatgag 1152 || |||||||| ||||||||||| |||||||| Sbjct: 4411712 accatgatgagttccttcagttaataaatgag 4411743 Score = 123 bits (62), Expect = 2e-24 Identities = 104/118 (88%) Strand = Plus / Plus Query: 684 tgtcaggaagcaatctggacacaatgattaaccagataatggagatggggggtggcagtt 743 |||| ||||||||||| ||||| | |||||||||| | ||||| ||||| |||||||||| Sbjct: 4410519 tgtcgggaagcaatcttgacactacgattaaccagctgatggaaatgggtggtggcagtt 4410578 Query: 744 gggatagagataaggtccaaagagctctccgtgcagcctataacaatccagaacgtgc 801 |||| |||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 4410579 gggacagagataaagtccaaagagctctacgtgcagcttataacaacccagagcgtgc 4410636 Score = 103 bits (52), Expect = 2e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 256 cggcgccgccatgaagctgacggtgaagactctcaagggcacccacttcgagatccgggt 315 ||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 4408219 cggcggcgccatgaagctgacggtgaagaccctcaagggcacccagttcgagatccgggt 4408278 Query: 316 ccagcacaatgacacc 331 |||| ||| |||||| Sbjct: 4408279 gcagcccaacgacacc 4408294 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1172 gggacttcttagaccaggctgaccaggatgaaatgcctcatgctatcagtgtgacaccag 1231 |||||||||||||||| ||||||||||||| ||||| ||| |||||| ||| ||||| | Sbjct: 4412043 gggacttcttagaccaacctgaccaggatgagatgccccattctatcaatgtcacacctg 4412102 Query: 1232 aagagcaagaggcaattgga 1251 ||||||||||||| |||||| Sbjct: 4412103 aagagcaagaggcgattgga 4412122 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 964 tggaggtgctgctggtggtggatcacttgattttcttcgaaataaccaacag 1015 |||||||| ||||||||||||| ||||||| || ||| || ||||||||||| Sbjct: 4410958 tggaggtggtgctggtggtggaacacttgagttccttagacataaccaacag 4411009 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1013 cagtttcaagcacttcgggaaatggtccatacaaatccacaaat 1056 |||||||| || |||||||||||||| ||||| || |||||||| Sbjct: 4411495 cagtttcaggcgcttcgggaaatggttcatactaacccacaaat 4411538 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 492 agagtaaagcttctgcttccagtggag 518 ||||||||||||||| ||||||||||| Sbjct: 4409754 agagtaaagcttctggttccagtggag 4409780
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 170 bits (86), Expect = 1e-38 Identities = 143/162 (88%) Strand = Plus / Plus Query: 332 attatggctgtcaagaagaacattgaagagattcaaggaaaggatagttatccatggggt 391 ||||||||||||||||||| |||||||||||| |||||||||||||| || |||||||| Sbjct: 92499 attatggctgtcaagaagatcattgaagagatacaaggaaaggatagctacccatggggc 92558 Query: 392 caacaactactgattcacaatggcaaggttttgaaggatgaaagcacattggatgagaat 451 ||||| | |||||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 92559 caacagttgctgattcacaatggcaaggttttgaaagatgaaagtacattggaagagaac 92618 Query: 452 caagttggcgaagctggatttctagttgtcatgcttagtaag 493 |||| | |||| ||| ||| |||||||||||||||||||| Sbjct: 92619 aaagtcagtgaagttgggtttttagttgtcatgcttagtaag 92660 Score = 135 bits (68), Expect = 6e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 1258 gaagccatggggtttgagagagcacgtgtcatcgaagcattcttcgcctgtgacaggaat 1317 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95799 gaaggcatgggatttgacagagcacgtgtcatcgaagcattcttcgcctgtgacaggaac 95858 Query: 1318 gagcaactcgctgcaaactatcttcttgagcatgctggtgacgaagaataga 1369 ||||||||||| ||||| || |||||||| ||||||| ||| ||||| |||| Sbjct: 95859 gagcaactcgcagcaaattaccttcttgaacatgctgctgatgaagattaga 95910 Score = 127 bits (64), Expect = 1e-25 Identities = 86/92 (93%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 1062 agcctatgctccaggaattgagcaagcagaatcctcaacttctaaggttgattcaggaga 1121 ||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| Sbjct: 95216 agcctatgctccaggaactgagcaagaagaatcctcaacttctgaggttgattcaggaga 95275 Query: 1122 acaatgatgag-tccttcagttactaaatgag 1152 || |||||||| ||||||||||| |||||||| Sbjct: 95276 accatgatgagttccttcagttaataaatgag 95307 Score = 123 bits (62), Expect = 2e-24 Identities = 104/118 (88%) Strand = Plus / Plus Query: 684 tgtcaggaagcaatctggacacaatgattaaccagataatggagatggggggtggcagtt 743 |||| ||||||||||| ||||| | |||||||||| | ||||| ||||| |||||||||| Sbjct: 94083 tgtcgggaagcaatcttgacactacgattaaccagctgatggaaatgggtggtggcagtt 94142 Query: 744 gggatagagataaggtccaaagagctctccgtgcagcctataacaatccagaacgtgc 801 |||| |||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 94143 gggacagagataaagtccaaagagctctacgtgcagcttataacaacccagagcgtgc 94200 Score = 103 bits (52), Expect = 2e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 256 cggcgccgccatgaagctgacggtgaagactctcaagggcacccacttcgagatccgggt 315 ||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 91783 cggcggcgccatgaagctgacggtgaagaccctcaagggcacccagttcgagatccgggt 91842 Query: 316 ccagcacaatgacacc 331 |||| ||| |||||| Sbjct: 91843 gcagcccaacgacacc 91858 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1172 gggacttcttagaccaggctgaccaggatgaaatgcctcatgctatcagtgtgacaccag 1231 |||||||||||||||| ||||||||||||| ||||| ||| |||||| ||| ||||| | Sbjct: 95607 gggacttcttagaccaacctgaccaggatgagatgccccattctatcaatgtcacacctg 95666 Query: 1232 aagagcaagaggcaattgga 1251 ||||||||||||| |||||| Sbjct: 95667 aagagcaagaggcgattgga 95686 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 964 tggaggtgctgctggtggtggatcacttgattttcttcgaaataaccaacag 1015 |||||||| ||||||||||||| ||||||| || ||| || ||||||||||| Sbjct: 94522 tggaggtggtgctggtggtggaacacttgagttccttagacataaccaacag 94573 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1013 cagtttcaagcacttcgggaaatggtccatacaaatccacaaat 1056 |||||||| || |||||||||||||| ||||| || |||||||| Sbjct: 95059 cagtttcaggcgcttcgggaaatggttcatactaacccacaaat 95102 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 492 agagtaaagcttctgcttccagtggag 518 ||||||||||||||| ||||||||||| Sbjct: 93318 agagtaaagcttctggttccagtggag 93344
>gb|AC135315.19| Medicago truncatula clone mth2-13p6, complete sequence Length = 135310 Score = 67.9 bits (34), Expect = 1e-07 Identities = 70/82 (85%) Strand = Plus / Minus Query: 353 attgaagagattcaaggaaaggatagttatccatggggtcaacaactactgattcacaat 412 |||||||| ||||||||||| |||| ||| ||||| | |||||| |||| ||||||||| Sbjct: 70831 attgaagacattcaaggaaaagataattacccatgcagacaacaattactaattcacaat 70772 Query: 413 ggcaaggttttgaaggatgaaa 434 || || |||||||| ||||||| Sbjct: 70771 ggaaaagttttgaaagatgaaa 70750
>gb|AC149040.2| Medicago truncatula chromosome 7 BAC clone mth2-9f22, complete sequence Length = 120423 Score = 67.9 bits (34), Expect = 1e-07 Identities = 70/82 (85%) Strand = Plus / Plus Query: 353 attgaagagattcaaggaaaggatagttatccatggggtcaacaactactgattcacaat 412 |||||||| ||||||||||| |||| ||| ||||| | |||||| |||| ||||||||| Sbjct: 26001 attgaagacattcaaggaaaagataattacccatgcagacaacaattactaattcacaat 26060 Query: 413 ggcaaggttttgaaggatgaaa 434 || || |||||||| ||||||| Sbjct: 26061 ggaaaagttttgaaagatgaaa 26082
>gb|AC166147.9| Medicago truncatula clone mth2-145g3, complete sequence Length = 126332 Score = 63.9 bits (32), Expect = 2e-06 Identities = 83/100 (83%) Strand = Plus / Minus Query: 335 atggctgtcaagaagaacattgaagagattcaaggaaaggatagttatccatggggtcaa 394 |||||||| || | ||| |||||||| ||||||||||| |||| ||| ||||| | ||| Sbjct: 79175 atggctgtaaaaatgaatattgaagacattcaaggaaaagataattacccatgcagacaa 79116 Query: 395 caactactgattcacaatggcaaggttttgaaggatgaaa 434 ||| | || ||||||||||| || |||||||| ||||||| Sbjct: 79115 caattgctaattcacaatggaaaagttttgaaagatgaaa 79076
>gb|AC168149.8| Medicago truncatula clone mth2-84g4, complete sequence Length = 122730 Score = 63.9 bits (32), Expect = 2e-06 Identities = 83/100 (83%) Strand = Plus / Minus Query: 335 atggctgtcaagaagaacattgaagagattcaaggaaaggatagttatccatggggtcaa 394 |||||||| || | ||| |||||||| ||||||||||| |||| ||| ||||| | ||| Sbjct: 40078 atggctgtaaaaatgaatattgaagacattcaaggaaaagataattacccatgcagacaa 40019 Query: 395 caactactgattcacaatggcaaggttttgaaggatgaaa 434 ||| | || ||||||||||| || |||||||| ||||||| Sbjct: 40018 caattgctaattcacaatggaaaagttttgaaagatgaaa 39979
>gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete sequence Length = 132894 Score = 63.9 bits (32), Expect = 2e-06 Identities = 83/100 (83%) Strand = Plus / Minus Query: 335 atggctgtcaagaagaacattgaagagattcaaggaaaggatagttatccatggggtcaa 394 |||||||| || | ||| |||||||| ||||||||||| |||| ||| ||||| | ||| Sbjct: 113268 atggctgtaaaaatgaatattgaagacattcaaggaaaagataattacccatgcagacaa 113209 Query: 395 caactactgattcacaatggcaaggttttgaaggatgaaa 434 ||| | || ||||||||||| || |||||||| ||||||| Sbjct: 113208 caattgctaattcacaatggaaaagttttgaaagatgaaa 113169
>gb|AC151816.17| Medicago truncatula clone mth2-85j22, complete sequence Length = 91918 Score = 63.9 bits (32), Expect = 2e-06 Identities = 83/100 (83%) Strand = Plus / Plus Query: 335 atggctgtcaagaagaacattgaagagattcaaggaaaggatagttatccatggggtcaa 394 |||||||| || | ||| |||||||| ||||||||||| |||| ||| ||||| | ||| Sbjct: 21683 atggctgtaaaaacgaatattgaagacattcaaggaaaagataattacccatgcagacaa 21742 Query: 395 caactactgattcacaatggcaaggttttgaaggatgaaa 434 ||| | || ||||||||||| || |||||||| ||||||| Sbjct: 21743 caattgctaattcacaatggaaaagttttgaaagatgaaa 21782
>gb|AC174374.16| Medicago truncatula clone mth2-54b11, complete sequence Length = 130542 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 353 attgaagagattcaaggaaaggatagttatccatggggtcaacaactactgattcacaat 412 |||||||| ||||||||||| |||| ||| ||||| | |||||| | || ||||||||| Sbjct: 23196 attgaagacattcaaggaaaagataattacccatgcagacaacaattgctaattcacaat 23137 Query: 413 ggcaaggttttgaaggatgaaa 434 || || |||||||| ||||||| Sbjct: 23136 ggaaaagttttgaaagatgaaa 23115
>ref|NM_101486.1| Arabidopsis thaliana damaged DNA binding (AT1G16190) mRNA, complete cds Length = 1107 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 399 tactgattcacaatggcaaggttttgaaggatgaaa 434 |||||||||||||||| ||||||||||| ||||||| Sbjct: 134 tactgattcacaatggaaaggttttgaaagatgaaa 169
>gb|DQ228332.1| Solanum tuberosum clone 140H03 unknown mRNA Length = 1475 Score = 56.0 bits (28), Expect = 4e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 1012 acagtttcaagcacttcgggaaatggtccatacaaatccacaaattttacagcctatgct 1071 |||||||||||| || || | |||||| || |||| |||||||| || ||||| ||||| Sbjct: 914 acagtttcaagccctccgagcaatggtgcaagcaaacccacaaatattgcagccaatgct 973 Query: 1072 ccaggaattgagcaagcagaatcctcaa 1099 |||||| ||| | ||||| ||||||||| Sbjct: 974 ccaggagttgggtaagcaaaatcctcaa 1001 Score = 46.1 bits (23), Expect = 0.40 Identities = 41/47 (87%) Strand = Plus / Plus Query: 782 tataacaatccagaacgtgccattgactatctgtactctggtattcc 828 |||||||||||||| | || ||||| || ||||||||||||||||| Sbjct: 678 tataacaatccagagagagctattgaatacctgtactctggtattcc 724
>gb|DQ222505.1| Solanum tuberosum clone 108E05 RAD23-like mRNA, complete cds Length = 1488 Score = 56.0 bits (28), Expect = 4e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 1012 acagtttcaagcacttcgggaaatggtccatacaaatccacaaattttacagcctatgct 1071 |||||||||||| || || | |||||| || |||| |||||||| || ||||| ||||| Sbjct: 929 acagtttcaagccctccgagcaatggtgcaagcaaacccacaaatattgcagccaatgct 988 Query: 1072 ccaggaattgagcaagcagaatcctcaa 1099 |||||| ||| | ||||| ||||||||| Sbjct: 989 ccaggagttgggtaagcaaaatcctcaa 1016
>dbj|AB109195.1| Arabidopsis thaliana AtRAD23-2 mRNA for RAD23-like protein, complete cds Length = 1101 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 399 tactgattcacaatggcaaggttttgaaggatgaaa 434 |||||||||||||||| ||||||||||| ||||||| Sbjct: 128 tactgattcacaatggaaaggttttgaaagatgaaa 163
>emb|BX842511.1|CNS0AC9X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1334 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 399 tactgattcacaatggcaaggttttgaaggatgaaa 434 |||||||||||||||| ||||||||||| ||||||| Sbjct: 154 tactgattcacaatggaaaggttttgaaagatgaaa 189
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 399 tactgattcacaatggcaaggttttgaaggatgaaa 434 |||||||||||||||| ||||||||||| ||||||| Sbjct: 78924 tactgattcacaatggaaaggttttgaaagatgaaa 78959
>gb|AC124970.21| Medicago truncatula clone mth2-7j19, complete sequence Length = 128254 Score = 52.0 bits (26), Expect = 0.006 Identities = 68/82 (82%) Strand = Plus / Plus Query: 353 attgaagagattcaaggaaaggatagttatccatggggtcaacaactactgattcacaat 412 |||||||| ||||||| ||| |||| ||| ||||| | |||||| | || ||||||||| Sbjct: 51574 attgaagacattcaagaaaaagataattacccatgcagacaacaattgctaattcacaat 51633 Query: 413 ggcaaggttttgaaggatgaaa 434 || || |||||||| ||||||| Sbjct: 51634 ggaaaagttttgaaagatgaaa 51655
>ref|NM_001063869.1| Oryza sativa (japonica cultivar-group) Os06g0264300 (Os06g0264300) mRNA, complete cds Length = 1629 Score = 48.1 bits (24), Expect = 0.10 Identities = 45/52 (86%) Strand = Plus / Plus Query: 259 cgccgccatgaagctgacggtgaagactctcaagggcacccacttcgagatc 310 ||||| |||||||||| |||||||| || ||||||||| ||||||||||| Sbjct: 142 cgccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatc 193
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.10 Identities = 45/52 (86%) Strand = Plus / Plus Query: 259 cgccgccatgaagctgacggtgaagactctcaagggcacccacttcgagatc 310 ||||| |||||||||| |||||||| || ||||||||| ||||||||||| Sbjct: 8731560 cgccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatc 8731611 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 cggtgacggagggggcgaggcgc 120 ||||||||||||||||||||||| Sbjct: 28418257 cggtgacggagggggcgaggcgc 28418235
>ref|NM_174407.2| Bos taurus opioid binding protein/cell adhesion molecule-like (OPCML), mRNA emb|X12672.1|BTOBCAM Bovine mRNA for opioid binding protein/cell adhesion molecule OBCAM Length = 2593 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 204 gagcagcgggaagggaagggaagg 227 |||||||||||||||||||||||| Sbjct: 2102 gagcagcgggaagggaagggaagg 2079
>emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosome, clone 11N17 Length = 147295 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 961 tgctggaggtgctgctggtggtgg 984 |||||||||||||||||||||||| Sbjct: 96751 tgctggaggtgctgctggtggtgg 96728
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 48.1 bits (24), Expect = 0.10 Identities = 45/52 (86%) Strand = Plus / Plus Query: 259 cgccgccatgaagctgacggtgaagactctcaagggcacccacttcgagatc 310 ||||| |||||||||| |||||||| || ||||||||| ||||||||||| Sbjct: 1881 cgccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatc 1932
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 48.1 bits (24), Expect = 0.10 Identities = 45/52 (86%) Strand = Plus / Plus Query: 259 cgccgccatgaagctgacggtgaagactctcaagggcacccacttcgagatc 310 ||||| |||||||||| |||||||| || ||||||||| ||||||||||| Sbjct: 146542 cgccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatc 146593
>dbj|AK073271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029B07, full insert sequence Length = 1629 Score = 48.1 bits (24), Expect = 0.10 Identities = 45/52 (86%) Strand = Plus / Plus Query: 259 cgccgccatgaagctgacggtgaagactctcaagggcacccacttcgagatc 310 ||||| |||||||||| |||||||| || ||||||||| ||||||||||| Sbjct: 143 cgccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatc 194
>dbj|AK061556.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C08, full insert sequence Length = 1567 Score = 48.1 bits (24), Expect = 0.10 Identities = 45/52 (86%) Strand = Plus / Plus Query: 259 cgccgccatgaagctgacggtgaagactctcaagggcacccacttcgagatc 310 ||||| |||||||||| |||||||| || ||||||||| ||||||||||| Sbjct: 108 cgccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatc 159
>ref|NM_001064953.1| Oryza sativa (japonica cultivar-group) Os06g0690900 (Os06g0690900) mRNA, complete cds Length = 2976 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 cggtgacggagggggcgaggcgc 120 ||||||||||||||||||||||| Sbjct: 160 cggtgacggagggggcgaggcgc 138
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 gcgcatcgagcgactgcggcggc 90 ||||||||||||||||||||||| Sbjct: 362267 gcgcatcgagcgactgcggcggc 362289
>emb|AL033520.16|HS349A12 Human DNA sequence from clone RP3-349A12 on chromosome 6p21.31-22.2 Contains the 3' end of gene FLJ20302, the TAF11 gene for TAF11 RNA polymerase II (TATA box binding protein (TBP)-associated factor, 28 kD), the 5' end of gene KIAA0229 for novel Ank, SAM (Sterile alpha motif) and Phosphotyrosine interaction (PTB/PID) domain containing protein (KIAA0229) and a CpG island, complete sequence Length = 132948 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1536 atgagcaaatttattgggagcta 1558 ||||||||||||||||||||||| Sbjct: 94034 atgagcaaatttattgggagcta 94056
>gb|AC146881.3| Otolemur garnettii clone CH256-571D18, complete sequence Length = 240447 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 ttgtcatgcttagtaagagtaaa 499 ||||||||||||||||||||||| Sbjct: 132541 ttgtcatgcttagtaagagtaaa 132519
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 cggtgacggagggggcgaggcgc 120 ||||||||||||||||||||||| Sbjct: 130835 cggtgacggagggggcgaggcgc 130813
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 cggtgacggagggggcgaggcgc 120 ||||||||||||||||||||||| Sbjct: 25290 cggtgacggagggggcgaggcgc 25268
>dbj|AB109199.1| Arabidopsis thaliana AtRAD23-4beta mRNA for RAD23-like protein, complete cds Length = 1032 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1044 caaatccacaaattttacagcctatgctccaggaa 1078 |||| ||||||||| ||||||||||||| |||||| Sbjct: 812 caaacccacaaattctacagcctatgcttcaggaa 846
>emb|CT981680.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 319 Score = 44.1 bits (22), Expect = 1.6 Identities = 79/98 (80%) Strand = Plus / Plus Query: 1258 gaagccatggggtttgagagagcacgtgtcatcgaagcattcttcgcctgtgacaggaat 1317 ||||| ||||| ||||| ||||| | ||||||||| ||||| || || |||||| |||| Sbjct: 70 gaagcaatgggatttgacagagcccttgtcatcgaggcatttttggcttgtgaccggaac 129 Query: 1318 gagcaactcgctgcaaactatcttcttgagcatgctgg 1355 ||| || | || || |||||||| | ||||||||||| Sbjct: 130 gaggaattggcggcgaactatctattggagcatgctgg 167
>ref|NM_202452.1| Arabidopsis thaliana RAD23; damaged DNA binding (RAD23) mRNA, complete cds Length = 1474 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 222 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 281 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 282 aaagatgaaa 291
>ref|NM_180651.1| Arabidopsis thaliana RAD23; damaged DNA binding (RAD23) mRNA, complete cds Length = 1551 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 239 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 298 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 299 aaagatgaaa 308
>ref|NM_106614.4| Arabidopsis thaliana RAD23; damaged DNA binding (RAD23) mRNA, complete cds Length = 1543 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 249 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 308 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 309 aaagatgaaa 318
>ref|NM_123208.1| Arabidopsis thaliana damaged DNA binding (AT5G38470) mRNA, complete cds Length = 1426 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1044 caaatccacaaattttacagcctatgctccagga 1077 |||| ||||||||| ||||||||||||| ||||| Sbjct: 890 caaacccacaaattctacagcctatgcttcagga 923
>ref|XM_652873.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0361.2), mRNA Length = 3843 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 206 gcagcgggaagggaagggaagg 227 |||||||||||||||||||||| Sbjct: 2084 gcagcgggaagggaagggaagg 2063
>gb|AY063103.1| Arabidopsis thaliana putative DNA repair protein RAD23 (At1g79650) mRNA, complete cds Length = 1129 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 100 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 159 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 160 aaagatgaaa 169
>gb|AY034912.1| Arabidopsis thaliana putative DNA repair protein RAD23 (At1g79650) mRNA, complete cds Length = 1518 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 236 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 295 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 296 aaagatgaaa 305
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1550 tgggagctatcggtggagtgct 1571 |||||||||||||||||||||| Sbjct: 2148388 tgggagctatcggtggagtgct 2148367
>gb|AY081835.1| Arabidopsis thaliana At5g38470/At5g38470 mRNA, complete cds Length = 1137 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1044 caaatccacaaattttacagcctatgctccagga 1077 |||| ||||||||| ||||||||||||| ||||| Sbjct: 812 caaacccacaaattctacagcctatgcttcagga 845
>gb|AY058196.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1426 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1044 caaatccacaaattttacagcctatgctccagga 1077 |||| ||||||||| ||||||||||||| ||||| Sbjct: 890 caaacccacaaattctacagcctatgcttcagga 923
>gb|AY088037.1| Arabidopsis thaliana clone 40579 mRNA, complete sequence Length = 1551 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 239 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 298 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 299 aaagatgaaa 308
>gb|AY087564.1| Arabidopsis thaliana clone 36697 mRNA, complete sequence Length = 1426 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1044 caaatccacaaattttacagcctatgctccagga 1077 |||| ||||||||| ||||||||||||| ||||| Sbjct: 890 caaacccacaaattctacagcctatgcttcagga 923
>gb|AY037181.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1378 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1044 caaatccacaaattttacagcctatgctccagga 1077 |||| ||||||||| ||||||||||||| ||||| Sbjct: 882 caaacccacaaattctacagcctatgcttcagga 915
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cggagccggtgacggagggggcgagg 117 |||||||||||||||||||| ||||| Sbjct: 58041 cggagccggtgacggaggggtcgagg 58066
>gb|AC121757.8| Homo sapiens 12 BAC RP11-259K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 65725 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 627 aaagaccacctgcagagacccctttgagca 656 |||| |||| |||||||||||||||||||| Sbjct: 3218 aaaggccacatgcagagacccctttgagca 3247
>dbj|AB109198.1| Arabidopsis thaliana AtRAD23-4alpha mRNA for RAD23-like protein, complete cds Length = 1137 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1044 caaatccacaaattttacagcctatgctccagga 1077 |||| ||||||||| ||||||||||||| ||||| Sbjct: 812 caaacccacaaattctacagcctatgcttcagga 845
>dbj|AB109194.1| Arabidopsis thaliana AtRAD23-1beta mRNA for RAD23-like protein, complete cds Length = 1098 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 100 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 159 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 160 aaagatgaaa 169
>dbj|AB109193.1| Arabidopsis thaliana AtRAD23-1alpha mRNA for RAD23-like protein, complete cds Length = 1116 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 100 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 159 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 160 aaagatgaaa 169
>emb|BX813670.1|CNS0ADH2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZD01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1406 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 211 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 270 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 271 aaagatgaaa 280
>emb|BX817136.1|CNS0AD46 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1450 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 194 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 253 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 254 aaagatgaaa 263
>emb|BX816837.1|CNS0AD82 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1446 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 218 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 277 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 278 aaagatgaaa 287
>emb|BX817125.1|CNS0AAOQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1420 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Plus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 222 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 281 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 282 aaagatgaaa 291
>emb|BX831369.1|CNS09ZF9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS83ZD01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1292 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1044 caaatccacaaattttacagcctatgctccagga 1077 |||| ||||||||| ||||||||||||| ||||| Sbjct: 839 caaacccacaaattctacagcctatgcttcagga 872
>emb|BX832915.1|CNS09YYW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL21ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 484 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1044 caaatccacaaattttacagcctatgctccagga 1077 |||| ||||||||| ||||||||||||| ||||| Sbjct: 24 caaacccacaaattctacagcctatgcttcagga 57
>emb|BX842499.1|CNS0ABLG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH44ZG01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1354 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 265 catgaagctgacggtgaagactctcaaggg 294 ||||||||| || ||||||||||||||||| Sbjct: 67 catgaagctcactgtgaagactctcaaggg 96 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 400 actgattcacaatggcaaggttttga 425 ||||||||||||||| |||||||||| Sbjct: 202 actgattcacaatggaaaggttttga 227
>gb|AC010793.3|AC010793 Genomic sequence for Arabidopsis thaliana BAC F20B17 from chromosome I, complete sequence Length = 90149 Score = 44.1 bits (22), Expect = 1.6 Identities = 58/70 (82%) Strand = Plus / Minus Query: 365 caaggaaaggatagttatccatggggtcaacaactactgattcacaatggcaaggttttg 424 |||||||| || | ||||||||| || || ||| | ||||||||||||| || |||||| Sbjct: 37428 caaggaaaagacaattatccatgtgggcagcaattgttgattcacaatggaaaagttttg 37369 Query: 425 aaggatgaaa 434 || ||||||| Sbjct: 37368 aaagatgaaa 37359
>gb|AY108395.1| Zea mays PCO142081 mRNA sequence Length = 1776 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 281 aagactctcaagggcacccacttcgagatc 310 ||||| |||||||||||| ||||||||||| Sbjct: 172 aagaccctcaagggcaccaacttcgagatc 201
>gb|AY103604.1| Zea mays PCO142082 mRNA sequence Length = 1672 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 281 aagactctcaagggcacccacttcgagatc 310 ||||| |||||||||||| ||||||||||| Sbjct: 145 aagaccctcaagggcaccaacttcgagatc 174
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 965 ggaggtgctgctggtggtggat 986 |||||||||||||||||||||| Sbjct: 2506327 ggaggtgctgctggtggtggat 2506348
>emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chromosome 2, complete sequence Length = 209053 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 211 gggaagggaagggaaggaactc 232 |||||||||||||||||||||| Sbjct: 32909 gggaagggaagggaaggaactc 32930
>emb|CR352286.6| Zebrafish DNA sequence from clone CH211-93A20 in linkage group 19, complete sequence Length = 147941 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1559 tcggtggagtgctgaaatgttg 1580 |||||||||||||||||||||| Sbjct: 35880 tcggtggagtgctgaaatgttg 35901
>emb|Y19214.1|HSPSIHHBB Homo sapiens putative psihHbB pseudogene for hair keratin, exons 1 and 5 to 8 Length = 15876 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 627 aaagaccacctgcagagacccctttgagca 656 |||| |||| |||||||||||||||||||| Sbjct: 4032 aaaggccacatgcagagacccctttgagca 4003
>gb|CP000482.1| Pelobacter propionicus DSM 2379, complete genome Length = 4008000 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1188 ggctgaccaggatgaaatgcc 1208 ||||||||||||||||||||| Sbjct: 1139971 ggctgaccaggatgaaatgcc 1139951
>gb|BC123037.1| Xenopus tropicalis solute carrier family 25, member 13 (citrin), mRNA (cDNA clone IMAGE:7848042), partial cds Length = 2193 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 881 gctgcagctcctggagaaact 901 ||||||||||||||||||||| Sbjct: 83 gctgcagctcctggagaaact 63
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 961 tgctggaggtgctgctggtgg 981 ||||||||||||||||||||| Sbjct: 16580932 tgctggaggtgctgctggtgg 16580912
>ref|XM_001107840.1| PREDICTED: Macaca mulatta ADAM metallopeptidase with thrombospondin type 1 motif, 14 (ADAMTS14), mRNA Length = 4025 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 966 gaggtgctgctggtggtggat 986 ||||||||||||||||||||| Sbjct: 1053 gaggtgctgctggtggtggat 1073
>emb|CR318663.13| Zebrafish DNA sequence from clone CH211-214J5 in linkage group 12, complete sequence Length = 214991 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 961 tgctggaggtgctgctggtggtgga 985 |||||| |||||||||||||||||| Sbjct: 193747 tgctggtggtgctgctggtggtgga 193723
>ref|NM_202482.1| Arabidopsis thaliana unknown protein (AT3G02540) mRNA, complete cds Length = 1403 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gtgaagactctcaagggcacccacttcgagatc 310 ||||| ||||||||||| || |||||||||||| Sbjct: 157 gtgaaaactctcaaggggactcacttcgagatc 189
>ref|NM_111121.2| Arabidopsis thaliana unknown protein (AT3G02540) mRNA, complete cds Length = 1681 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gtgaagactctcaagggcacccacttcgagatc 310 ||||| ||||||||||| || |||||||||||| Sbjct: 157 gtgaaaactctcaaggggactcacttcgagatc 189
>gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-144f20, complete sequence Length = 132371 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 965 ggaggtgctgctggtggtgga 985 ||||||||||||||||||||| Sbjct: 53785 ggaggtgctgctggtggtgga 53765
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 966 gaggtgctgctggtggtggat 986 ||||||||||||||||||||| Sbjct: 854057 gaggtgctgctggtggtggat 854077
>ref|NM_001008648.1| Danio rerio zgc:101713 (zgc:101713), mRNA gb|BC086726.1| Danio rerio zgc:101713, mRNA (cDNA clone MGC:101713 IMAGE:7228406), complete cds Length = 2352 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 961 tgctggaggtgctgctggtggtgga 985 |||||| |||||||||||||||||| Sbjct: 1430 tgctggtggtgctgctggtggtgga 1406
>gb|AC007772.6| Drosophila melanogaster clone BACR19P12, complete sequence Length = 186607 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 961 tgctggaggtgctgctggtgg 981 ||||||||||||||||||||| Sbjct: 39480 tgctggaggtgctgctggtgg 39460
>gb|BC072270.1| Xenopus laevis hypothetical protein LOC443574, mRNA (cDNA clone IMAGE:4408521), partial cds Length = 2625 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 881 gctgcagctcctggagaaact 901 ||||||||||||||||||||| Sbjct: 487 gctgcagctcctggagaaact 467
>ref|XM_454735.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E17479g predicted mRNA Length = 7482 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 aagaacattgaagagattcaa 367 ||||||||||||||||||||| Sbjct: 4231 aagaacattgaagagattcaa 4251
>gb|AC006648.1| Caenorhabditis elegans cosmid F59H6, complete sequence Length = 37628 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 988 acttgattttcttcgaaataa 1008 ||||||||||||||||||||| Sbjct: 30165 acttgattttcttcgaaataa 30145
>ref|NM_212667.1| Danio rerio dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) (dlat), mRNA gb|AY188775.1| Danio rerio dihydrolipoamide S-acetyltransferase (dlat) mRNA, complete cds Length = 1959 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 961 tgctggaggtgctgctggtggtgga 985 |||||||| |||||||||||||||| Sbjct: 996 tgctggagctgctgctggtggtgga 972
>gb|AC121079.20| Mus musculus chromosome 3, clone RP24-178P12, complete sequence Length = 177802 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1181 tagaccaggctgaccaggatg 1201 ||||||||||||||||||||| Sbjct: 74347 tagaccaggctgaccaggatg 74327
>gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence, complete sequence Length = 103904 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 278 gtgaagactctcaagggcacccacttcgagatc 310 ||||| ||||||||||| || |||||||||||| Sbjct: 51780 gtgaaaactctcaaggggactcacttcgagatc 51748
>ref|XM_546149.2| PREDICTED: Canis familiaris similar to a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 14 isoform 2 preproprotein (LOC489031), mRNA Length = 3675 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 966 gaggtgctgctggtggtggat 986 ||||||||||||||||||||| Sbjct: 787 gaggtgctgctggtggtggat 807
>ref|NM_142655.1| Drosophila melanogaster CG15690-RA (CG15690), mRNA Length = 411 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 961 tgctggaggtgctgctggtgg 981 ||||||||||||||||||||| Sbjct: 131 tgctggaggtgctgctggtgg 111
>gb|AC093856.3| Homo sapiens BAC clone RP11-518I12 from 7, complete sequence Length = 205317 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 961 tgctggaggtgctgctggtggtgga 985 ||||||||||||| ||||||||||| Sbjct: 6741 tgctggaggtgctcctggtggtgga 6765
>gb|AC104329.22| Mus musculus strain C57BL/6J clone rp23-418c12 map 3, complete sequence Length = 197096 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1181 tagaccaggctgaccaggatg 1201 ||||||||||||||||||||| Sbjct: 151452 tagaccaggctgaccaggatg 151472
>gb|AC107375.5| Homo sapiens chromosome 8, clone CTA-204B4, complete sequence Length = 115626 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 gcttctgcttccagtggaggt 520 ||||||||||||||||||||| Sbjct: 89268 gcttctgcttccagtggaggt 89248
>gb|AF530567.1| Oncidium cv. 'Goldiana' sucrose synthase (sus1) mRNA, complete cds Length = 2829 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 686 tcaggaagcaatctggacacaatga 710 |||||||||||||||| |||||||| Sbjct: 1182 tcaggaagcaatctggtcacaatga 1158
>gb|AF455140.1| Mus musculus Src homology 2 domain-containing transforming protein 1 isoform p66 and Src homology 2 domain-containing transforming protein 1 isoform p52 genes, alternative promoter regions, exons 1 and 2 and partial cds Length = 5178 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1181 tagaccaggctgaccaggatg 1201 ||||||||||||||||||||| Sbjct: 2452 tagaccaggctgaccaggatg 2432
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cggcgcatcgagcgactgcggcggc 90 ||||||||||||||| ||||||||| Sbjct: 1708674 cggcgcatcgagcgaatgcggcggc 1708698
>gb|AY113034.1| Arabidopsis thaliana AT3g02540/F16B3_17 mRNA, complete cds Length = 1260 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gtgaagactctcaagggcacccacttcgagatc 310 ||||| ||||||||||| || |||||||||||| Sbjct: 13 gtgaaaactctcaaggggactcacttcgagatc 45
>dbj|AK046026.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230334K19 product:hypothetical protein, full insert sequence Length = 3064 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 996 ttcttcgaaataaccaacagt 1016 ||||||||||||||||||||| Sbjct: 1065 ttcttcgaaataaccaacagt 1085
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 tcgagcgactgcggcggcgcggagc 97 ||||||| ||||||||||||||||| Sbjct: 39511161 tcgagcggctgcggcggcgcggagc 39511137
>gb|AF419981.1|AF419981 Drosophila yakuba defective chorion-1 fc125 protein precursor (dec-1) mRNA, complete cds, alternatively spliced Length = 3898 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 960 atgctggaggtgctgctggtg 980 ||||||||||||||||||||| Sbjct: 729 atgctggaggtgctgctggtg 709
>gb|AF419980.1|AF419980 Drosophila yakuba defective chorion-1 fc106 protein precursor (dec-1) mRNA, complete cds, alternatively spliced Length = 3911 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 960 atgctggaggtgctgctggtg 980 ||||||||||||||||||||| Sbjct: 729 atgctggaggtgctgctggtg 709
>gb|AF419979.1|AF419979 Drosophila yakuba defective chorion-1 fc177 protein precursor (dec-1) mRNA, complete cds, alternatively spliced Length = 5926 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 960 atgctggaggtgctgctggtg 980 ||||||||||||||||||||| Sbjct: 729 atgctggaggtgctgctggtg 709
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 aagaacattgaagagattcaa 367 ||||||||||||||||||||| Sbjct: 1546409 aagaacattgaagagattcaa 1546389
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 985 atcacttgattttcttcgaaa 1005 ||||||||||||||||||||| Sbjct: 757158 atcacttgattttcttcgaaa 757178
>gb|AY039562.1| Arabidopsis thaliana AT3g02540/F16B3_17 mRNA, complete cds Length = 1667 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gtgaagactctcaagggcacccacttcgagatc 310 ||||| ||||||||||| || |||||||||||| Sbjct: 143 gtgaaaactctcaaggggactcacttcgagatc 175
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 966 gaggtgctgctggtggtggat 986 ||||||||||||||||||||| Sbjct: 164577 gaggtgctgctggtggtggat 164557
>emb|BX296544.8| Zebrafish DNA sequence from clone DKEYP-14B8 in linkage group 21, complete sequence Length = 168838 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 961 tgctggaggtgctgctggtggtgga 985 |||||||| |||||||||||||||| Sbjct: 113809 tgctggagctgctgctggtggtgga 113785
>gb|BT022325.1| Drosophila melanogaster IP04544 full insert cDNA Length = 1564 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 961 tgctggaggtgctgctggtgg 981 ||||||||||||||||||||| Sbjct: 116 tgctggaggtgctgctggtgg 96
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 tcgagcgactgcggcggcgcggagc 97 ||||||| ||||||||||||||||| Sbjct: 86175 tcgagcggctgcggcggcgcggagc 86151
>gb|BC094139.1| Xenopus laevis hypothetical protein LOC443574, mRNA (cDNA clone MGC:115189 IMAGE:6958692), complete cds Length = 2640 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 881 gctgcagctcctggagaaact 901 ||||||||||||||||||||| Sbjct: 490 gctgcagctcctggagaaact 470
>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR26M03, complete sequence Length = 197071 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 961 tgctggaggtgctgctggtgg 981 ||||||||||||||||||||| Sbjct: 165230 tgctggaggtgctgctggtgg 165210
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 tcgagcgactgcggcggcgcggagc 97 ||||||| ||||||||||||||||| Sbjct: 65603 tcgagcggctgcggcggcgcggagc 65579
>dbj|AB109197.1| Arabidopsis thaliana AtRAD23-3beta mRNA for RAD23-like protein, complete cds Length = 1014 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gtgaagactctcaagggcacccacttcgagatc 310 ||||| ||||||||||| || |||||||||||| Sbjct: 13 gtgaaaactctcaaggggactcacttcgagatc 45
>dbj|AB109196.1| Arabidopsis thaliana AtRAD23-3alpha mRNA for RAD23-like protein, complete cds Length = 1260 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gtgaagactctcaagggcacccacttcgagatc 310 ||||| ||||||||||| || |||||||||||| Sbjct: 13 gtgaaaactctcaaggggactcacttcgagatc 45
>gb|AC114542.9| Mus musculus chromosome 9, clone RP23-111F9, complete sequence Length = 235924 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 996 ttcttcgaaataaccaacagt 1016 ||||||||||||||||||||| Sbjct: 24795 ttcttcgaaataaccaacagt 24775
>emb|BX823804.1|CNS0A7FW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS77ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1674 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gtgaagactctcaagggcacccacttcgagatc 310 ||||| ||||||||||| || |||||||||||| Sbjct: 140 gtgaaaactctcaaggggactcacttcgagatc 172
>emb|BX824698.1|CNS0A6VI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1405 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gtgaagactctcaagggcacccacttcgagatc 310 ||||| ||||||||||| || |||||||||||| Sbjct: 56 gtgaaaactctcaaggggactcacttcgagatc 88
>emb|BX824390.1|CNS0A6TM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1456 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gtgaagactctcaagggcacccacttcgagatc 310 ||||| ||||||||||| || |||||||||||| Sbjct: 95 gtgaaaactctcaaggggactcacttcgagatc 127
>ref|XM_449068.1| Candida glabrata CBS138, CAGL0L06710g partial mRNA Length = 990 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 985 atcacttgattttcttcgaaa 1005 ||||||||||||||||||||| Sbjct: 129 atcacttgattttcttcgaaa 109
>emb|BX648174.1|HSM808321 Homo sapiens mRNA; cDNA DKFZp686O1432 (from clone DKFZp686O1432) Length = 5460 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 gcgggaagggaagggaaggaa 229 ||||||||||||||||||||| Sbjct: 270 gcgggaagggaagggaaggaa 250
>gb|AY106832.1| Zea mays PCO074808 mRNA sequence Length = 1378 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 tgtcaagaagaacattgaaga 360 ||||||||||||||||||||| Sbjct: 273 tgtcaagaagaacattgaaga 293
>ref|NM_001016920.2| Xenopus tropicalis solute carrier family 25, member 13 (citrin) (slc25a13), mRNA emb|CR848162.2| Xenopus tropicalis finished cDNA, clone TGas113e06 Length = 2358 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 881 gctgcagctcctggagaaact 901 ||||||||||||||||||||| Sbjct: 232 gctgcagctcctggagaaact 212
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 cattgaagagattcaaggaaa 372 ||||||||||||||||||||| Sbjct: 405444 cattgaagagattcaaggaaa 405464
>emb|AL833804.16| Mouse DNA sequence from clone RP23-20A6 on chromosome 2, complete sequence Length = 200521 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1035 tggtccatacaaatccacaaa 1055 ||||||||||||||||||||| Sbjct: 173326 tggtccatacaaatccacaaa 173346
>emb|CT025653.7| Mouse DNA sequence from clone RP23-62D21 on chromosome 9, complete sequence Length = 256470 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 996 ttcttcgaaataaccaacagt 1016 ||||||||||||||||||||| Sbjct: 93665 ttcttcgaaataaccaacagt 93645
>emb|AL672247.8| Mouse DNA sequence from clone RP23-95I19 on chromosome X, complete sequence Length = 224241 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 gggaagggaagggaaggaact 231 ||||||||||||||||||||| Sbjct: 42988 gggaagggaagggaaggaact 43008
>emb|AL845257.2| Mouse DNA sequence from clone RP23-280K4 on chromosome 2, complete sequence Length = 169281 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1175 acttcttagaccaggctgacc 1195 ||||||||||||||||||||| Sbjct: 39187 acttcttagaccaggctgacc 39167
>gb|AC171273.1| Mus musculus BAC clone RP23-137J12 from chromosome 3, complete sequence Length = 234363 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1181 tagaccaggctgaccaggatg 1201 ||||||||||||||||||||| Sbjct: 121910 tagaccaggctgaccaggatg 121930
>dbj|AB024414.1| Gallid herpesvirus 1 (serotype 2) DNA, UL region complete sequence Length = 110637 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 gcggagccggtgacggagggggcga 115 |||||||||| |||||||||||||| Sbjct: 110038 gcggagccggggacggagggggcga 110014
>dbj|AB049735.1| Gallid herpesvirus 3 DNA, complete genome, strain:HPRS24 Length = 164270 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 gcggagccggtgacggagggggcga 115 |||||||||| |||||||||||||| Sbjct: 11721 gcggagccggggacggagggggcga 11745 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 gcggagccggtgacggagggggcga 115 |||||||||| |||||||||||||| Sbjct: 121862 gcggagccggggacggagggggcga 121838
>dbj|D28115.1|HSMHPRS24 Marek's disease virus gene for ORF, complete cds Length = 2540 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 gcggagccggtgacggagggggcga 115 |||||||||| |||||||||||||| Sbjct: 597 gcggagccggggacggagggggcga 621 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 286,498,805 Number of extensions: 15924796 Number of successful extensions: 455658 Number of sequences better than 10.0: 129 Number of HSP's gapped: 455651 Number of HSP's successfully gapped: 156 Length of query: 1621 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1598 Effective length of database: 18,503,978,556 Effective search space: 29569357732488 Effective search space used: 29569357732488 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
