No.
Definition
Score (bits)
E Value
1 ref|NM_001053493.1| Oryza sativa (japonica cultivar-group) Os02g...
454
e-124
2 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
454
e-124
3 dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic D...
454
e-124
4 dbj|AK068618.1| Oryza sativa (japonica cultivar-group) cDNA clon...
454
e-124
5 dbj|AK058519.1| Oryza sativa (japonica cultivar-group) cDNA clon...
262
5e-66
6 gb|AY104275.1| Zea mays PCO109524 mRNA sequence
117
2e-22
7 dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic D...
96
7e-16
8 ref|NM_113584.3| Arabidopsis thaliana protein binding / ubiquiti...
80
4e-11
9 gb|AY074325.1| Arabidopsis thaliana putative RING zinc finger pr...
80
4e-11
10 emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic sequence
80
4e-11
11 gb|BT003004.1| Arabidopsis thaliana clone U19494 putative RING z...
80
4e-11
12 dbj|AB026648.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
80
4e-11
13 emb|CT829368.1| Oryza sativa (indica cultivar-group) cDNA clone:...
56
6e-04
14 emb|BX825206.1|CNS0A4OR Arabidopsis thaliana Full-length cDNA Co...
46
0.59
15 gb|AC190262.3| Pan troglodytes BAC clone CH251-9O5 from chromoso...
44
2.3
16 gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s...
44
2.3
17 gb|AC115060.9| Mus musculus chromosome 1, clone RP24-395F2, comp...
44
2.3
18 gb|AC165946.4| Mus musculus chromosome 1, clone RP24-167M10, com...
44
2.3
19 gb|AC006033.2| Homo sapiens BAC clone RP11-121A8 from 7, complet...
44
2.3
20 gb|U70857.2| Caenorhabditis elegans cosmid C10G8, complete sequence
44
2.3
21 dbj|AK091579.1| Homo sapiens cDNA FLJ34260 fis, clone FEBRA20007...
44
2.3
22 gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell...
44
2.3
23 gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswel...
44
2.3
24 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
44
2.3
25 dbj|AP006506.1| Mus musculus genomic DNA, chromosome 4, clone: R...
44
2.3
26 emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4,...
44
2.3
27 gb|AC006115.1|AC006115 Homo sapiens chromosome 19, BAC CIT-B-470...
44
2.3
28 emb|AL607145.28| Mouse DNA sequence from clone RP23-230I5 on chr...
44
2.3
29 ref|XM_001007178.1| Tetrahymena thermophila SB210 hypothetical p...
42
9.2
30 ref|NM_009671.5| Mus musculus ankyrin repeat and FYVE domain con...
42
9.2
31 gb|AC188672.3| Pan troglodytes BAC clone CH251-322P18 from chrom...
42
9.2
32 emb|AM180355.1| Clostridium difficile 630 complete genome
42
9.2
33 ref|XM_001080190.1| PREDICTED: Rattus norvegicus ankyrin repeat ...
42
9.2
34 ref|XM_239269.4| PREDICTED: Rattus norvegicus ankyrin repeat and...
42
9.2
35 ref|NM_100521.1| Arabidopsis thaliana ATTPS7; transferase, trans...
42
9.2
36 gb|AC162612.2| Mus musculus chromosome 19, clone RP24-334K20, co...
42
9.2
37 gb|AC102790.7| Mus musculus chromosome 19, clone RP23-321D22, co...
42
9.2
38 gb|AC165251.2| Mus musculus BAC clone RP24-75C16 from chromosome...
42
9.2
39 gb|AC008474.9| Homo sapiens chromosome 19 clone CTC-379B2, compl...
42
9.2
40 emb|CR974579.12| Pig DNA sequence from clone CH242-209L2 on chro...
42
9.2
41 emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chrom...
42
9.2
42 dbj|AK014592.1| Mus musculus 0 day neonate skin cDNA, RIKEN full...
42
9.2
43 gb|AE010194.1| Pyrococcus furiosus DSM 3638, section 69 of 173 o...
42
9.2
44 gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, comple...
42
9.2
45 dbj|AB098157.2| Mus musculus Ankhzn gene for ankyrin repeat hook...
42
9.2
46 emb|AL354810.8| Human DNA sequence from clone RP11-527N12 on chr...
42
9.2
47 emb|AL139084.9| Human DNA sequence from clone RP11-318G11 on chr...
42
9.2
48 emb|AL078599.19|HSDJ991C6 Human DNA sequence from clone RP5-991C...
42
9.2
49 gb|AC007434.8| Homo sapiens, clone RP11-17A8, complete sequence
42
9.2
50 emb|AL663082.5| Mouse DNA sequence from clone RP23-327G1 on chro...
42
9.2
51 gb|AC107083.5| Homo sapiens BAC clone RP11-810G17 from 2, comple...
42
9.2
52 gb|AC068143.4|T2D23 Sequence of BAC T2D23 from Arabidopsis thali...
42
9.2
53 gb|AC008736.6|AC008736 Homo sapiens chromosome 19 clone CTD-2538...
42
9.2
54 gb|AC090953.2| Homo sapiens chromosome 3 clone RP11-608O8 map 3p...
42
9.2
55 gb|AC090948.2| Homo sapiens chromosome 3 clone RP11-415F23 map 3...
42
9.2
56 dbj|AB098329.1| Mus musculus Ankhzn mRNA for ankyrin repeat hook...
42
9.2
57 dbj|AK122479.1| Mus musculus mRNA for mKIAA1255 protein
42
9.2
58 dbj|AB011370.2| Mus musculus Ankhzn mRNA, complete cds
42
9.2
59 gb|AC161466.4| Gallus gallus BAC clone CH261-104N11 from chromos...
42
9.2
>ref|NM_001053493.1 | Oryza sativa (japonica cultivar-group) Os02g0516600 (Os02g0516600)
mRNA, complete cds
Length = 2668
Score = 454 bits (229), Expect = e-124
Identities = 457/533 (85%)
Strand = Plus / Plus
Query: 482 ctagaaagaatcaggctgtgaatgcaaattatcttctgaatttccagtatgatcctattt 541
|||||||||||||| |||| ||||| |||||||| ||||||||||| |||||||| ||||
Sbjct: 535 ctagaaagaatcagtctgtaaatgccaattatctgctgaatttccactatgatccaattt 594
Query: 542 ctcgactgcagcctcatggccctagaacatatccaccgagaaggcaaaggaagattaagc 601
|||| | |||||| ||||| ||||||||||| | ||||| || |||||||| | |
Sbjct: 595 ctcggccacagcctagaggccccagaacatatcctacaagaagacagaggaagatcagac 654
Query: 602 cttacaacaaggacttgttcctccaagcaaattttaagtttgttgtgttggatactggaa 661
| |||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 655 catacaacaaagatttgttcctacaagcaaattttaagtttgttgtgttggatactggaa 714
Query: 662 attatcagattgattcaatggatcctgataagatgctccagtgggaagatatcatctgtg 721
||| | || || | ||||||||| |||||||||||||||||||||||||| | ||||
Sbjct: 715 gctatgaaatagaattaatggatccagataagatgctccagtgggaagatattgtatgtg 774
Query: 722 taagatattgtagcccttctgaggtgcgatgtcccatttgcttggaaagcccgctgtgcc 781
||||||||| |||||||| |||||||| ||| || ||||||||||| ||||| ||||||
Sbjct: 775 taagatattatagcccttgtgaggtgcaatgccctatttgcttggagagcccattgtgcc 834
Query: 782 cacagattacatcatgcggtcatatatattgctttccatgcattttgcattatttactaa 841
|||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| |
Sbjct: 835 cacagattacatcatgtggtcatatatattgctttccatgcattttacgttatttactta 894
Query: 842 tgggtaaagaggattacaagggtgactgctggaagaagtgcccactgtgtttcatgatga 901
|||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 895 tgggaaaagaagattacaaaggtgaaagctggaagaagtgcccactgtgtttcatgatga 954
Query: 902 tatcagcaaaagagttgaccaccatttttgtcactcaacttcagcatttccatattggtg 961
| ||| |||| |||||| || || | | | |||||| | |||||||| ||| ||||||
Sbjct: 955 tctcaacaaaggagttgtatacaatctatattactcaagtccagcattttcatgttggtg 1014
Query: 962 acaatgtgaccttcgcacttctggggcggtcaaaaaattcgctcactccttct 1014
|||||||||| || ||||| || | || ||||||||||| ||||||||||||
Sbjct: 1015 acaatgtgacatttacacttttgagccgctcaaaaaattcactcactccttct 1067
Score = 262 bits (132), Expect = 5e-66
Identities = 324/388 (83%)
Strand = Plus / Plus
Query: 1506 ttttaccaggtgattgatggtcagcacctaattcttcatccattgaacatgaaatgcctt 1565
||||||||||| |||||| || ||||||||||||||||| | |||||||||||||||
Sbjct: 1560 ttttaccaggtatctgatggccaacacctaattcttcatccgctaaacatgaaatgcctt 1619
Query: 1566 cttaaccattttggaaattctgatacgcttccaccaagagtgactggaaaaatcttggag 1625
| ||||||| ||||| |||||||| ||| ||||||||| | ||||||||||||||||
Sbjct: 1620 ataaaccattatggaagttctgatatgctcccaccaagaatacatggaaaaatcttggag 1679
Query: 1626 ttggaaactataacacagtctgaggcttcaagaaaacgctaccgcttcttaagccacttc 1685
| |||||| ||||||| || || ||| ||||||| ||||| || | |||| ||||||
Sbjct: 1680 ctagaaactgtaacacaatccgaagctacaagaaagcgctatcgttatctaagtcacttc 1739
Query: 1686 tcattaactacaacgttccagttctgcgaaattgacctgagtgatatgctcccgcctatc 1745
||||| || ||||||||||||||||| |||||||||||| |||||||||| || |||| |
Sbjct: 1740 tcattgacaacaacgttccagttctgtgaaattgacctgggtgatatgctgcctcctagc 1799
Query: 1746 tcattggctccattcatggatgaaatcaaaaggcgcgagaaacaaagagtgcaaactgcc 1805
||||| ||||||||||||||||||||||| | ||| |||||||| || | |||||||
Sbjct: 1800 tcattagctccattcatggatgaaatcaagaagcgagagaaacagaggaaacgaactgcc 1859
Query: 1806 aagaaggaagaaaaggacagggtgaaggccgaagtagccgctgctgcgcaggaatctgct 1865
||||||||||||| || || ||||| |||||||| || |||||||| |||| ||||||
Sbjct: 1860 aagaaggaagaaagcgatagagtgaaagccgaagttgctgctgctgcacaggcatctgca 1919
Query: 1866 atgcgttttgaatatacaaatttctctc 1893
|||| |||||| |||||| |||||||
Sbjct: 1920 atgctgtttgaacatacaagcttctctc 1947
Score = 190 bits (96), Expect = 2e-44
Identities = 207/244 (84%)
Strand = Plus / Plus
Query: 1043 ctatagacgaagatccttgcaatgttttctccaagttcattttgacatctgatgttgagc 1102
||||||||||||||||||||| || |||||||||||||||||||| |||||||| || |
Sbjct: 1093 ctatagacgaagatccttgcagtgcattctccaagttcattttgacgtctgatgtggaac 1152
Query: 1103 tctccgttagaggggcaaaatcagatctcagtaattggttgcagatggctgacttgggcc 1162
| || ||||||| ||||||| ||||||| |||||||||||| ||||| || || ||||
Sbjct: 1153 tttctgttagagaggcaaaaacagatcttgttaattggttgcatatggcagatttaggcc 1212
Query: 1163 ttgttgatgacttggagaaacttccatatgtttccgctgctttggagcaactggaagaaa 1222
|||| ||||||||||||||||||||||| ||||| | ||||||||||| || ||||||
Sbjct: 1213 ttgtggatgacttggagaaacttccatacgtttctaccgctttggagcagctagaagaac 1272
Query: 1223 ggatgaaatattggtctgagttcagatattacagtagcagcccccctctaaaaaatagct 1282
|||||||||||||| ||||| |||| ||| ||| |||||| || |||||| | ||||
Sbjct: 1273 ggatgaaatattggagtgagtacagaaattttagtgtcagccctcccctaaaagacagct 1332
Query: 1283 tctc 1286
||||
Sbjct: 1333 tctc 1336
Score = 145 bits (73), Expect = 9e-31
Identities = 136/157 (86%)
Strand = Plus / Plus
Query: 1903 gcgatgttatgttctctctcgatgactttgaagctctgggaaataatgctggaccatcaa 1962
||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||| || |
Sbjct: 1966 gcgattttatgttctctctggatgactttgaagctcttggaaacaatgctggaccctcca 2025
Query: 1963 caagcccaccggccagtgaacgtaaacttttctccgatgttacacggcttggtttcgcgt 2022
| || ||||| ||||| ||| | || ||||||||||||||| |||||||||| || ||||
Sbjct: 2026 cgagtccaccagccagcgaaagaaagcttttctccgatgttgcacggcttggctttgcgt 2085
Query: 2023 ctgcgcaagactcccctcctcttagagctgaaactgg 2059
|||| |||||||| |||||||| |||| |||| ||||
Sbjct: 2086 ctgcccaagactcgcctcctctaagagttgaatctgg 2122
Score = 95.6 bits (48), Expect = 7e-16
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 39 cgagctcccgcgcgg-gttcatgtccatctcccctacagaatccaccagaggatcccacc 97
||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||| |
Sbjct: 64 cgagctcccgcgcggagttgatgtccatctccccttccgaatccaccagaggatcccagc 123
Query: 98 cgcccgctccgcgcgcctcgaaccctagcccc 129
||| ||| |||||| | || ||||||||||||
Sbjct: 124 cgctcgcgccgcgcccttccaaccctagcccc 155
Score = 56.0 bits (28), Expect = 6e-04
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 2175 aaaccaaatggagtcggaaaggcgggcaagaagcgcaccaaggtgcttttatcgacaggc 2234
|||||||||| |||||| ||| |||||||| | |||||| ||||| || || || |||
Sbjct: 2241 aaaccaaatgtagtcgggaagaaaggcaagaaacccaccaaagtgctcttgtccactggc 2300
Query: 2235 ggtggccgccgatact 2250
||||||||||||||||
Sbjct: 2301 ggtggccgccgatact 2316
Score = 46.1 bits (23), Expect = 0.59
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 246 tgttgatacatcccaagcggtagttggatttagaatatctggtgaagaggatgat 300
||||||||| |||||| |||||||||||| ||||| ||| | |||||| |||||
Sbjct: 296 tgttgatacttcccaaaaggtagttggattcagaatctctagagaagagaatgat 350
>dbj|AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
Length = 35954743
Score = 454 bits (229), Expect = e-124
Identities = 457/533 (85%)
Strand = Plus / Minus
Query: 482 ctagaaagaatcaggctgtgaatgcaaattatcttctgaatttccagtatgatcctattt 541
|||||||||||||| |||| ||||| |||||||| ||||||||||| |||||||| ||||
Sbjct: 18753440 ctagaaagaatcagtctgtaaatgccaattatctgctgaatttccactatgatccaattt 18753381
Query: 542 ctcgactgcagcctcatggccctagaacatatccaccgagaaggcaaaggaagattaagc 601
|||| | |||||| ||||| ||||||||||| | ||||| || |||||||| | |
Sbjct: 18753380 ctcggccacagcctagaggccccagaacatatcctacaagaagacagaggaagatcagac 18753321
Query: 602 cttacaacaaggacttgttcctccaagcaaattttaagtttgttgtgttggatactggaa 661
| |||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 18753320 catacaacaaagatttgttcctacaagcaaattttaagtttgttgtgttggatactggaa 18753261
Query: 662 attatcagattgattcaatggatcctgataagatgctccagtgggaagatatcatctgtg 721
||| | || || | ||||||||| |||||||||||||||||||||||||| | ||||
Sbjct: 18753260 gctatgaaatagaattaatggatccagataagatgctccagtgggaagatattgtatgtg 18753201
Query: 722 taagatattgtagcccttctgaggtgcgatgtcccatttgcttggaaagcccgctgtgcc 781
||||||||| |||||||| |||||||| ||| || ||||||||||| ||||| ||||||
Sbjct: 18753200 taagatattatagcccttgtgaggtgcaatgccctatttgcttggagagcccattgtgcc 18753141
Query: 782 cacagattacatcatgcggtcatatatattgctttccatgcattttgcattatttactaa 841
|||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| |
Sbjct: 18753140 cacagattacatcatgtggtcatatatattgctttccatgcattttacgttatttactta 18753081
Query: 842 tgggtaaagaggattacaagggtgactgctggaagaagtgcccactgtgtttcatgatga 901
|||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 18753080 tgggaaaagaagattacaaaggtgaaagctggaagaagtgcccactgtgtttcatgatga 18753021
Query: 902 tatcagcaaaagagttgaccaccatttttgtcactcaacttcagcatttccatattggtg 961
| ||| |||| |||||| || || | | | |||||| | |||||||| ||| ||||||
Sbjct: 18753020 tctcaacaaaggagttgtatacaatctatattactcaagtccagcattttcatgttggtg 18752961
Query: 962 acaatgtgaccttcgcacttctggggcggtcaaaaaattcgctcactccttct 1014
|||||||||| || ||||| || | || ||||||||||| ||||||||||||
Sbjct: 18752960 acaatgtgacatttacacttttgagccgctcaaaaaattcactcactccttct 18752908
Score = 190 bits (96), Expect = 2e-44
Identities = 207/244 (84%)
Strand = Plus / Minus
Query: 1043 ctatagacgaagatccttgcaatgttttctccaagttcattttgacatctgatgttgagc 1102
||||||||||||||||||||| || |||||||||||||||||||| |||||||| || |
Sbjct: 18752882 ctatagacgaagatccttgcagtgcattctccaagttcattttgacgtctgatgtggaac 18752823
Query: 1103 tctccgttagaggggcaaaatcagatctcagtaattggttgcagatggctgacttgggcc 1162
| || ||||||| ||||||| ||||||| |||||||||||| ||||| || || ||||
Sbjct: 18752822 tttctgttagagaggcaaaaacagatcttgttaattggttgcatatggcagatttaggcc 18752763
Query: 1163 ttgttgatgacttggagaaacttccatatgtttccgctgctttggagcaactggaagaaa 1222
|||| ||||||||||||||||||||||| ||||| | ||||||||||| || ||||||
Sbjct: 18752762 ttgtggatgacttggagaaacttccatacgtttctaccgctttggagcagctagaagaac 18752703
Query: 1223 ggatgaaatattggtctgagttcagatattacagtagcagcccccctctaaaaaatagct 1282
|||||||||||||| ||||| |||| ||| ||| |||||| || |||||| | ||||
Sbjct: 18752702 ggatgaaatattggagtgagtacagaaattttagtgtcagccctcccctaaaagacagct 18752643
Query: 1283 tctc 1286
||||
Sbjct: 18752642 tctc 18752639
Score = 101 bits (51), Expect = 1e-17
Identities = 108/127 (85%)
Strand = Plus / Minus
Query: 1933 aagctctgggaaataatgctggaccatcaacaagcccaccggccagtgaacgtaaacttt 1992
||||||| ||||| ||||||||||| || || || ||||| ||||| ||| | || ||||
Sbjct: 18749860 aagctcttggaaacaatgctggaccctccacgagtccaccagccagcgaaagaaagcttt 18749801
Query: 1993 tctccgatgttacacggcttggtttcgcgtctgcgcaagactcccctcctcttagagctg 2052
||||||||||| |||||||||| || |||||||| |||||||| |||||||| |||| ||
Sbjct: 18749800 tctccgatgttgcacggcttggctttgcgtctgcccaagactcgcctcctctaagagttg 18749741
Query: 2053 aaactgg 2059
|| ||||
Sbjct: 18749740 aatctgg 18749734
Score = 99.6 bits (50), Expect = 5e-17
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 1704 cagttctgcgaaattgacctgagtgatatgctcccgcctatctcattggctccattcatg 1763
|||||||| |||||||||||| |||||||||| || |||| |||||| ||||||||||||
Sbjct: 18751747 cagttctgtgaaattgacctgggtgatatgctgcctcctagctcattagctccattcatg 18751688
Query: 1764 gatgaaatcaaaaggcgcgagaaaca 1789
||||||||||| | ||| ||||||||
Sbjct: 18751687 gatgaaatcaagaagcgagagaaaca 18751662
Score = 95.6 bits (48), Expect = 7e-16
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 39 cgagctcccgcgcgg-gttcatgtccatctcccctacagaatccaccagaggatcccacc 97
||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||| |
Sbjct: 18754986 cgagctcccgcgcggagttgatgtccatctccccttccgaatccaccagaggatcccagc 18754927
Query: 98 cgcccgctccgcgcgcctcgaaccctagcccc 129
||| ||| |||||| | || ||||||||||||
Sbjct: 18754926 cgctcgcgccgcgcccttccaaccctagcccc 18754895
Score = 79.8 bits (40), Expect = 4e-11
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 1520 tgatggtcagcacctaattcttcatccattgaacatgaaatgccttcttaaccattttgg 1579
|||||| || ||||||||||||||||| | ||||||||||||||| | ||||||| |||
Sbjct: 18752315 tgatggccaacacctaattcttcatccgctaaacatgaaatgccttataaaccattatgg 18752256
Query: 1580 aaattctgatacgcttccaccaag 1603
|| |||||||| ||| ||||||||
Sbjct: 18752255 aagttctgatatgctcccaccaag 18752232
Score = 65.9 bits (33), Expect = 6e-07
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 1610 tggaaaaatcttggagttggaaactataacacagtctgaggcttcaagaaaacgctaccg 1669
|||||||||||||||| | |||||| ||||||| || || ||| ||||||| ||||| ||
Sbjct: 18751914 tggaaaaatcttggagctagaaactgtaacacaatccgaagctacaagaaagcgctatcg 18751855
Query: 1670 cttcttaagccacttctcattaactacaacgttccag 1706
| |||| ||||||||||| || ||||||||||||
Sbjct: 18751854 ttatctaagtcacttctcattgacaacaacgttccag 18751818
Score = 56.0 bits (28), Expect = 6e-04
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 2175 aaaccaaatggagtcggaaaggcgggcaagaagcgcaccaaggtgcttttatcgacaggc 2234
|||||||||| |||||| ||| |||||||| | |||||| ||||| || || || |||
Sbjct: 18749507 aaaccaaatgtagtcgggaagaaaggcaagaaacccaccaaagtgctcttgtccactggc 18749448
Query: 2235 ggtggccgccgatact 2250
||||||||||||||||
Sbjct: 18749447 ggtggccgccgatact 18749432
Score = 50.1 bits (25), Expect = 0.038
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1903 gcgatgttatgttctctctcgatgactttgaag 1935
||||| ||||||||||||| |||||||||||||
Sbjct: 18750094 gcgattttatgttctctctggatgactttgaag 18750062
>dbj|AP005497.4 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBb0071O21
Length = 158410
Score = 454 bits (229), Expect = e-124
Identities = 457/533 (85%)
Strand = Plus / Minus
Query: 482 ctagaaagaatcaggctgtgaatgcaaattatcttctgaatttccagtatgatcctattt 541
|||||||||||||| |||| ||||| |||||||| ||||||||||| |||||||| ||||
Sbjct: 96082 ctagaaagaatcagtctgtaaatgccaattatctgctgaatttccactatgatccaattt 96023
Query: 542 ctcgactgcagcctcatggccctagaacatatccaccgagaaggcaaaggaagattaagc 601
|||| | |||||| ||||| ||||||||||| | ||||| || |||||||| | |
Sbjct: 96022 ctcggccacagcctagaggccccagaacatatcctacaagaagacagaggaagatcagac 95963
Query: 602 cttacaacaaggacttgttcctccaagcaaattttaagtttgttgtgttggatactggaa 661
| |||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 95962 catacaacaaagatttgttcctacaagcaaattttaagtttgttgtgttggatactggaa 95903
Query: 662 attatcagattgattcaatggatcctgataagatgctccagtgggaagatatcatctgtg 721
||| | || || | ||||||||| |||||||||||||||||||||||||| | ||||
Sbjct: 95902 gctatgaaatagaattaatggatccagataagatgctccagtgggaagatattgtatgtg 95843
Query: 722 taagatattgtagcccttctgaggtgcgatgtcccatttgcttggaaagcccgctgtgcc 781
||||||||| |||||||| |||||||| ||| || ||||||||||| ||||| ||||||
Sbjct: 95842 taagatattatagcccttgtgaggtgcaatgccctatttgcttggagagcccattgtgcc 95783
Query: 782 cacagattacatcatgcggtcatatatattgctttccatgcattttgcattatttactaa 841
|||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| |
Sbjct: 95782 cacagattacatcatgtggtcatatatattgctttccatgcattttacgttatttactta 95723
Query: 842 tgggtaaagaggattacaagggtgactgctggaagaagtgcccactgtgtttcatgatga 901
|||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 95722 tgggaaaagaagattacaaaggtgaaagctggaagaagtgcccactgtgtttcatgatga 95663
Query: 902 tatcagcaaaagagttgaccaccatttttgtcactcaacttcagcatttccatattggtg 961
| ||| |||| |||||| || || | | | |||||| | |||||||| ||| ||||||
Sbjct: 95662 tctcaacaaaggagttgtatacaatctatattactcaagtccagcattttcatgttggtg 95603
Query: 962 acaatgtgaccttcgcacttctggggcggtcaaaaaattcgctcactccttct 1014
|||||||||| || ||||| || | || ||||||||||| ||||||||||||
Sbjct: 95602 acaatgtgacatttacacttttgagccgctcaaaaaattcactcactccttct 95550
Score = 190 bits (96), Expect = 2e-44
Identities = 207/244 (84%)
Strand = Plus / Minus
Query: 1043 ctatagacgaagatccttgcaatgttttctccaagttcattttgacatctgatgttgagc 1102
||||||||||||||||||||| || |||||||||||||||||||| |||||||| || |
Sbjct: 95524 ctatagacgaagatccttgcagtgcattctccaagttcattttgacgtctgatgtggaac 95465
Query: 1103 tctccgttagaggggcaaaatcagatctcagtaattggttgcagatggctgacttgggcc 1162
| || ||||||| ||||||| ||||||| |||||||||||| ||||| || || ||||
Sbjct: 95464 tttctgttagagaggcaaaaacagatcttgttaattggttgcatatggcagatttaggcc 95405
Query: 1163 ttgttgatgacttggagaaacttccatatgtttccgctgctttggagcaactggaagaaa 1222
|||| ||||||||||||||||||||||| ||||| | ||||||||||| || ||||||
Sbjct: 95404 ttgtggatgacttggagaaacttccatacgtttctaccgctttggagcagctagaagaac 95345
Query: 1223 ggatgaaatattggtctgagttcagatattacagtagcagcccccctctaaaaaatagct 1282
|||||||||||||| ||||| |||| ||| ||| |||||| || |||||| | ||||
Sbjct: 95344 ggatgaaatattggagtgagtacagaaattttagtgtcagccctcccctaaaagacagct 95285
Query: 1283 tctc 1286
||||
Sbjct: 95284 tctc 95281
Score = 101 bits (51), Expect = 1e-17
Identities = 108/127 (85%)
Strand = Plus / Minus
Query: 1933 aagctctgggaaataatgctggaccatcaacaagcccaccggccagtgaacgtaaacttt 1992
||||||| ||||| ||||||||||| || || || ||||| ||||| ||| | || ||||
Sbjct: 92502 aagctcttggaaacaatgctggaccctccacgagtccaccagccagcgaaagaaagcttt 92443
Query: 1993 tctccgatgttacacggcttggtttcgcgtctgcgcaagactcccctcctcttagagctg 2052
||||||||||| |||||||||| || |||||||| |||||||| |||||||| |||| ||
Sbjct: 92442 tctccgatgttgcacggcttggctttgcgtctgcccaagactcgcctcctctaagagttg 92383
Query: 2053 aaactgg 2059
|| ||||
Sbjct: 92382 aatctgg 92376
Score = 99.6 bits (50), Expect = 5e-17
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 1704 cagttctgcgaaattgacctgagtgatatgctcccgcctatctcattggctccattcatg 1763
|||||||| |||||||||||| |||||||||| || |||| |||||| ||||||||||||
Sbjct: 94389 cagttctgtgaaattgacctgggtgatatgctgcctcctagctcattagctccattcatg 94330
Query: 1764 gatgaaatcaaaaggcgcgagaaaca 1789
||||||||||| | ||| ||||||||
Sbjct: 94329 gatgaaatcaagaagcgagagaaaca 94304
Score = 95.6 bits (48), Expect = 7e-16
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 39 cgagctcccgcgcgg-gttcatgtccatctcccctacagaatccaccagaggatcccacc 97
||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||| |
Sbjct: 97628 cgagctcccgcgcggagttgatgtccatctccccttccgaatccaccagaggatcccagc 97569
Query: 98 cgcccgctccgcgcgcctcgaaccctagcccc 129
||| ||| |||||| | || ||||||||||||
Sbjct: 97568 cgctcgcgccgcgcccttccaaccctagcccc 97537
Score = 79.8 bits (40), Expect = 4e-11
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 1520 tgatggtcagcacctaattcttcatccattgaacatgaaatgccttcttaaccattttgg 1579
|||||| || ||||||||||||||||| | ||||||||||||||| | ||||||| |||
Sbjct: 94957 tgatggccaacacctaattcttcatccgctaaacatgaaatgccttataaaccattatgg 94898
Query: 1580 aaattctgatacgcttccaccaag 1603
|| |||||||| ||| ||||||||
Sbjct: 94897 aagttctgatatgctcccaccaag 94874
Score = 65.9 bits (33), Expect = 6e-07
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 1610 tggaaaaatcttggagttggaaactataacacagtctgaggcttcaagaaaacgctaccg 1669
|||||||||||||||| | |||||| ||||||| || || ||| ||||||| ||||| ||
Sbjct: 94556 tggaaaaatcttggagctagaaactgtaacacaatccgaagctacaagaaagcgctatcg 94497
Query: 1670 cttcttaagccacttctcattaactacaacgttccag 1706
| |||| ||||||||||| || ||||||||||||
Sbjct: 94496 ttatctaagtcacttctcattgacaacaacgttccag 94460
Score = 56.0 bits (28), Expect = 6e-04
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 2175 aaaccaaatggagtcggaaaggcgggcaagaagcgcaccaaggtgcttttatcgacaggc 2234
|||||||||| |||||| ||| |||||||| | |||||| ||||| || || || |||
Sbjct: 92149 aaaccaaatgtagtcgggaagaaaggcaagaaacccaccaaagtgctcttgtccactggc 92090
Query: 2235 ggtggccgccgatact 2250
||||||||||||||||
Sbjct: 92089 ggtggccgccgatact 92074
Score = 50.1 bits (25), Expect = 0.038
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1903 gcgatgttatgttctctctcgatgactttgaag 1935
||||| ||||||||||||| |||||||||||||
Sbjct: 92736 gcgattttatgttctctctggatgactttgaag 92704
>dbj|AK068618.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013157F12, full
insert sequence
Length = 2671
Score = 454 bits (229), Expect = e-124
Identities = 457/533 (85%)
Strand = Plus / Plus
Query: 482 ctagaaagaatcaggctgtgaatgcaaattatcttctgaatttccagtatgatcctattt 541
|||||||||||||| |||| ||||| |||||||| ||||||||||| |||||||| ||||
Sbjct: 537 ctagaaagaatcagtctgtaaatgccaattatctgctgaatttccactatgatccaattt 596
Query: 542 ctcgactgcagcctcatggccctagaacatatccaccgagaaggcaaaggaagattaagc 601
|||| | |||||| ||||| ||||||||||| | ||||| || |||||||| | |
Sbjct: 597 ctcggccacagcctagaggccccagaacatatcctacaagaagacagaggaagatcagac 656
Query: 602 cttacaacaaggacttgttcctccaagcaaattttaagtttgttgtgttggatactggaa 661
| |||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 657 catacaacaaagatttgttcctacaagcaaattttaagtttgttgtgttggatactggaa 716
Query: 662 attatcagattgattcaatggatcctgataagatgctccagtgggaagatatcatctgtg 721
||| | || || | ||||||||| |||||||||||||||||||||||||| | ||||
Sbjct: 717 gctatgaaatagaattaatggatccagataagatgctccagtgggaagatattgtatgtg 776
Query: 722 taagatattgtagcccttctgaggtgcgatgtcccatttgcttggaaagcccgctgtgcc 781
||||||||| |||||||| |||||||| ||| || ||||||||||| ||||| ||||||
Sbjct: 777 taagatattatagcccttgtgaggtgcaatgccctatttgcttggagagcccattgtgcc 836
Query: 782 cacagattacatcatgcggtcatatatattgctttccatgcattttgcattatttactaa 841
|||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| |
Sbjct: 837 cacagattacatcatgtggtcatatatattgctttccatgcattttacgttatttactta 896
Query: 842 tgggtaaagaggattacaagggtgactgctggaagaagtgcccactgtgtttcatgatga 901
|||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 897 tgggaaaagaagattacaaaggtgaaagctggaagaagtgcccactgtgtttcatgatga 956
Query: 902 tatcagcaaaagagttgaccaccatttttgtcactcaacttcagcatttccatattggtg 961
| ||| |||| |||||| || || | | | |||||| | |||||||| ||| ||||||
Sbjct: 957 tctcaacaaaggagttgtatacaatctatattactcaagtccagcattttcatgttggtg 1016
Query: 962 acaatgtgaccttcgcacttctggggcggtcaaaaaattcgctcactccttct 1014
|||||||||| || ||||| || | || ||||||||||| ||||||||||||
Sbjct: 1017 acaatgtgacatttacacttttgagccgctcaaaaaattcactcactccttct 1069
Score = 262 bits (132), Expect = 5e-66
Identities = 324/388 (83%)
Strand = Plus / Plus
Query: 1506 ttttaccaggtgattgatggtcagcacctaattcttcatccattgaacatgaaatgcctt 1565
||||||||||| |||||| || ||||||||||||||||| | |||||||||||||||
Sbjct: 1562 ttttaccaggtatctgatggccaacacctaattcttcatccgctaaacatgaaatgcctt 1621
Query: 1566 cttaaccattttggaaattctgatacgcttccaccaagagtgactggaaaaatcttggag 1625
| ||||||| ||||| |||||||| ||| ||||||||| | ||||||||||||||||
Sbjct: 1622 ataaaccattatggaagttctgatatgctcccaccaagaatacatggaaaaatcttggag 1681
Query: 1626 ttggaaactataacacagtctgaggcttcaagaaaacgctaccgcttcttaagccacttc 1685
| |||||| ||||||| || || ||| ||||||| ||||| || | |||| ||||||
Sbjct: 1682 ctagaaactgtaacacaatccgaagctacaagaaagcgctatcgttatctaagtcacttc 1741
Query: 1686 tcattaactacaacgttccagttctgcgaaattgacctgagtgatatgctcccgcctatc 1745
||||| || ||||||||||||||||| |||||||||||| |||||||||| || |||| |
Sbjct: 1742 tcattgacaacaacgttccagttctgtgaaattgacctgggtgatatgctgcctcctagc 1801
Query: 1746 tcattggctccattcatggatgaaatcaaaaggcgcgagaaacaaagagtgcaaactgcc 1805
||||| ||||||||||||||||||||||| | ||| |||||||| || | |||||||
Sbjct: 1802 tcattagctccattcatggatgaaatcaagaagcgagagaaacagaggaaacgaactgcc 1861
Query: 1806 aagaaggaagaaaaggacagggtgaaggccgaagtagccgctgctgcgcaggaatctgct 1865
||||||||||||| || || ||||| |||||||| || |||||||| |||| ||||||
Sbjct: 1862 aagaaggaagaaagcgatagagtgaaagccgaagttgctgctgctgcacaggcatctgca 1921
Query: 1866 atgcgttttgaatatacaaatttctctc 1893
|||| |||||| |||||| |||||||
Sbjct: 1922 atgctgtttgaacatacaagcttctctc 1949
Score = 182 bits (92), Expect = 4e-42
Identities = 206/244 (84%)
Strand = Plus / Plus
Query: 1043 ctatagacgaagatccttgcaatgttttctccaagttcattttgacatctgatgttgagc 1102
||||||||||||||||||||| || |||||||||||||||||||| |||||||| || |
Sbjct: 1095 ctatagacgaagatccttgcagtgcattctccaagttcattttgacgtctgatgtggaac 1154
Query: 1103 tctccgttagaggggcaaaatcagatctcagtaattggttgcagatggctgacttgggcc 1162
| || ||||||| ||||||| ||||||| |||||||||||| ||||| || || ||||
Sbjct: 1155 tttctgttagagaggcaaaaacagatcttgttaattggttgcatatggcagatttaggcc 1214
Query: 1163 ttgttgatgacttggagaaacttccatatgtttccgctgctttggagcaactggaagaaa 1222
|||| | ||||||||||||||||||||| ||||| | ||||||||||| || ||||||
Sbjct: 1215 ttgtgggtgacttggagaaacttccatacgtttctaccgctttggagcagctagaagaac 1274
Query: 1223 ggatgaaatattggtctgagttcagatattacagtagcagcccccctctaaaaaatagct 1282
|||||||||||||| ||||| |||| ||| ||| |||||| || |||||| | ||||
Sbjct: 1275 ggatgaaatattggagtgagtacagaaattttagtgtcagccctcccctaaaagacagct 1334
Query: 1283 tctc 1286
||||
Sbjct: 1335 tctc 1338
Score = 145 bits (73), Expect = 9e-31
Identities = 136/157 (86%)
Strand = Plus / Plus
Query: 1903 gcgatgttatgttctctctcgatgactttgaagctctgggaaataatgctggaccatcaa 1962
||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||| || |
Sbjct: 1968 gcgattttatgttctctctggatgactttgaagctcttggaaacaatgctggaccctcca 2027
Query: 1963 caagcccaccggccagtgaacgtaaacttttctccgatgttacacggcttggtttcgcgt 2022
| || ||||| ||||| ||| | || ||||||||||||||| |||||||||| || ||||
Sbjct: 2028 cgagtccaccagccagcgaaagaaagcttttctccgatgttgcacggcttggctttgcgt 2087
Query: 2023 ctgcgcaagactcccctcctcttagagctgaaactgg 2059
|||| |||||||| |||||||| |||| |||| ||||
Sbjct: 2088 ctgcccaagactcgcctcctctaagagttgaatctgg 2124
Score = 87.7 bits (44), Expect = 2e-13
Identities = 81/92 (88%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 39 cgagctcccgcgcgg-gttcatgtccatctcccctacagaatccaccagaggatcccacc 97
||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||| |
Sbjct: 66 cgagctcccgcgcggagttgatgtccatctccccttccgaatccaccagaggatcccagc 125
Query: 98 cgcccgctccgcgcgcctcgaaccctagcccc 129
||| ||| |||||| || ||||||||||||
Sbjct: 126 cgctcgcgccgcgccattccaaccctagcccc 157
Score = 56.0 bits (28), Expect = 6e-04
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 2175 aaaccaaatggagtcggaaaggcgggcaagaagcgcaccaaggtgcttttatcgacaggc 2234
|||||||||| |||||| ||| |||||||| | |||||| ||||| || || || |||
Sbjct: 2243 aaaccaaatgtagtcgggaagaaaggcaagaaacccaccaaagtgctcttgtccactggc 2302
Query: 2235 ggtggccgccgatact 2250
||||||||||||||||
Sbjct: 2303 ggtggccgccgatact 2318
Score = 46.1 bits (23), Expect = 0.59
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 246 tgttgatacatcccaagcggtagttggatttagaatatctggtgaagaggatgat 300
||||||||| |||||| |||||||||||| ||||| ||| | |||||| |||||
Sbjct: 298 tgttgatacttcccaaaaggtagttggattcagaatctctagagaagagaatgat 352
>dbj|AK058519.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-016-H05, full
insert sequence
Length = 1608
Score = 262 bits (132), Expect = 5e-66
Identities = 324/388 (83%)
Strand = Plus / Plus
Query: 1506 ttttaccaggtgattgatggtcagcacctaattcttcatccattgaacatgaaatgcctt 1565
||||||||||| |||||| || ||||||||||||||||| | |||||||||||||||
Sbjct: 570 ttttaccaggtatctgatggccaacacctaattcttcatccgctaaacatgaaatgcctt 629
Query: 1566 cttaaccattttggaaattctgatacgcttccaccaagagtgactggaaaaatcttggag 1625
| ||||||| ||||| |||||||| ||| ||||||||| | ||||||||||||||||
Sbjct: 630 ataaaccattatggaagttctgatatgctcccaccaagaatacatggaaaaatcttggag 689
Query: 1626 ttggaaactataacacagtctgaggcttcaagaaaacgctaccgcttcttaagccacttc 1685
| |||||| ||||||| || || ||| ||||||| ||||| || | |||| ||||||
Sbjct: 690 ctagaaactgtaacacaatccgaagctacaagaaagcgctatcgttatctaagtcacttc 749
Query: 1686 tcattaactacaacgttccagttctgcgaaattgacctgagtgatatgctcccgcctatc 1745
||||| || ||||||||||||||||| |||||||||||| |||||||||| || |||| |
Sbjct: 750 tcattgacaacaacgttccagttctgtgaaattgacctgggtgatatgctgcctcctagc 809
Query: 1746 tcattggctccattcatggatgaaatcaaaaggcgcgagaaacaaagagtgcaaactgcc 1805
||||| ||||||||||||||||||||||| | ||| |||||||| || | |||||||
Sbjct: 810 tcattagctccattcatggatgaaatcaagaagcgagagaaacagaggaaacgaactgcc 869
Query: 1806 aagaaggaagaaaaggacagggtgaaggccgaagtagccgctgctgcgcaggaatctgct 1865
||||||||||||| || || ||||| |||||||| || |||||||| |||| ||||||
Sbjct: 870 aagaaggaagaaagcgatagagtgaaagccgaagttgctgctgctgcacaggcatctgca 929
Query: 1866 atgcgttttgaatatacaaatttctctc 1893
|||| |||||| |||||| |||||||
Sbjct: 930 atgctgtttgaacatacaagcttctctc 957
Score = 190 bits (96), Expect = 2e-44
Identities = 207/244 (84%)
Strand = Plus / Plus
Query: 1043 ctatagacgaagatccttgcaatgttttctccaagttcattttgacatctgatgttgagc 1102
||||||||||||||||||||| || |||||||||||||||||||| |||||||| || |
Sbjct: 103 ctatagacgaagatccttgcagtgcattctccaagttcattttgacgtctgatgtggaac 162
Query: 1103 tctccgttagaggggcaaaatcagatctcagtaattggttgcagatggctgacttgggcc 1162
| || ||||||| ||||||| ||||||| |||||||||||| ||||| || || ||||
Sbjct: 163 tttctgttagagaggcaaaaacagatcttgttaattggttgcatatggcagatttaggcc 222
Query: 1163 ttgttgatgacttggagaaacttccatatgtttccgctgctttggagcaactggaagaaa 1222
|||| ||||||||||||||||||||||| ||||| | ||||||||||| || ||||||
Sbjct: 223 ttgtggatgacttggagaaacttccatacgtttctaccgctttggagcagctagaagaac 282
Query: 1223 ggatgaaatattggtctgagttcagatattacagtagcagcccccctctaaaaaatagct 1282
|||||||||||||| ||||| |||| ||| ||| |||||| || |||||| | ||||
Sbjct: 283 ggatgaaatattggagtgagtacagaaattttagtgtcagccctcccctaaaagacagct 342
Query: 1283 tctc 1286
||||
Sbjct: 343 tctc 346
Score = 145 bits (73), Expect = 9e-31
Identities = 136/157 (86%)
Strand = Plus / Plus
Query: 1903 gcgatgttatgttctctctcgatgactttgaagctctgggaaataatgctggaccatcaa 1962
||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||| || |
Sbjct: 976 gcgattttatgttctctctggatgactttgaagctcttggaaacaatgctggaccctcca 1035
Query: 1963 caagcccaccggccagtgaacgtaaacttttctccgatgttacacggcttggtttcgcgt 2022
| || ||||| ||||| ||| | || ||||||||||||||| |||||||||| || ||||
Sbjct: 1036 cgagtccaccagccagcgaaagaaagcttttctccgatgttgcacggcttggctttgcgt 1095
Query: 2023 ctgcgcaagactcccctcctcttagagctgaaactgg 2059
|||| |||||||| |||||||| |||| |||| ||||
Sbjct: 1096 ctgcccaagactcgcctcctctaagagttgaatctgg 1132
Score = 63.9 bits (32), Expect = 2e-06
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 943 cagcatttccatattggtgacaatgtgaccttcgcacttctggggcggtcaaaaaattcg 1002
|||||||| ||| |||||||||||||||| || ||||| || | || |||||||||||
Sbjct: 6 cagcattttcatgttggtgacaatgtgacatttacacttttgagccgctcaaaaaattca 65
Query: 1003 ctcactccttct 1014
||||||||||||
Sbjct: 66 ctcactccttct 77
Score = 56.0 bits (28), Expect = 6e-04
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 2175 aaaccaaatggagtcggaaaggcgggcaagaagcgcaccaaggtgcttttatcgacaggc 2234
|||||||||| |||||| ||| |||||||| | |||||| ||||| || || || |||
Sbjct: 1251 aaaccaaatgtagtcgggaagaaaggcaagaaacccaccaaagtgctcttgtccactggc 1310
Query: 2235 ggtggccgccgatact 2250
||||||||||||||||
Sbjct: 1311 ggtggccgccgatact 1326
>gb|AC161466.4 | Gallus gallus BAC clone CH261-104N11 from chromosome ul, complete
sequence
Length = 189905
Score = 42.1 bits (21), Expect = 9.2
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2101 cagcgtcttccatgtcctttgccag 2125
|||| ||||||||||||||||||||
Sbjct: 123956 cagcctcttccatgtcctttgccag 123980
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 461,546,271
Number of extensions: 24573041
Number of successful extensions: 173308
Number of sequences better than 10.0: 59
Number of HSP's gapped: 173291
Number of HSP's successfully gapped: 103
Length of query: 2391
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2368
Effective length of database: 18,503,978,556
Effective search space: 43817421220608
Effective search space used: 43817421220608
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)