ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf71g18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os11g0551300:Os11g0551300 | 30 | 1.0 | 2 | AK106924:Os10g0555300 | 29 | 1.8 | 3 | AK059026:Os03g0352300 | 28 | 4.0 | 4 | Os05g0121600:Os05g0121600 | 24 | 5.1 | 5 | AJ575230:Os03g0111500 | 27 | 6.8 | 6 | AK109928:Os02g0116700 | 27 | 6.8 | 7 | AK109924:Os11g0538400 | 27 | 6.9 | 8 | AK120437:Os11g0620100 | 27 | 8.9 | 9 | AK107324:Os11g0620100 | 27 | 8.9 | 10 | AK099639:Os11g0620100 | 27 | 8.9 | 11 | AK064742:Os01g0356900 | 27 | 8.9 | 12 | AK060913:Os11g0620100 | 27 | 8.9 | 13 | AK101144:Os06g0688100 | 27 | 9.0 | 14 | AK073794:Os06g0688100 | 27 | 9.0 |
|---|
>Os11g0551300:Os11g0551300 | Length = 1192 Score = 30.0 bits (66), Expect = 1.0 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +3 Query: 84 SKPAEE-GRAHSCYTPPAPAPASSGQRGQIRQTPT 185 SKPA +A PAPAP +SG+RG++ PT Sbjct: 1098 SKPARFLEKARRAGITPAPAPPASGRRGRVEVWPT 1132
>AK106924:Os10g0555300 | Length = 359 Score = 29.3 bits (64), Expect = 1.8 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 Query: 96 EEGRAHSCYTPPAPAPASSGQRGQIRQTP 182 + G+ C PP PAPASS I + P Sbjct: 261 KRGKGGGCVPPPRPAPASSAAAPAIHECP 289
>AK059026:Os03g0352300 | Length = 113 Score = 28.1 bits (61), Expect = 4.0 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = +1 Query: 109 LTLATHHRRQHRRLLANVAKSAKPQQRHWDLLV*DHRSELRPHRNQRRTV 258 + L+ RR+ RR + +S + ++R W + + R + P R +RRTV Sbjct: 36 MKLSLELRRRKRRRSTSWRRSHRSRRRAWRMPMATPRRTVLPRRRRRRTV 85
>Os05g0121600:Os05g0121600 | Length = 519 Score = 24.3 bits (51), Expect(2) = 5.1 Identities = 13/42 (30%), Positives = 18/42 (42%) Frame = +1 Query: 124 HHRRQHRRLLANVAKSAKPQQRHWDLLV*DHRSELRPHRNQR 249 HH+ Q + + SA P +HW L RPH + R Sbjct: 95 HHQHQQLLVTRELFPSAAPSPQHWAELGFLRPDPPRPHPDIR 136 Score = 21.9 bits (45), Expect(2) = 5.1 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +3 Query: 90 PAEEGRAHSCYTPPAPAP 143 PAEEG + TPP+P P Sbjct: 43 PAEEGSSS---TPPSPPP 57
>AJ575230:Os03g0111500 | Length = 239 Score = 27.3 bits (59), Expect = 6.8 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 93 AEEGRAHSCYTPPAPAPASSGQRGQIRQTP 182 A++ R+ PPAPAPA Q G++ P Sbjct: 41 AKKKRSRDASLPPAPAPARHRQAGKVLCAP 70
>AK109928:Os02g0116700 | Length = 1060 Score = 27.3 bits (59), Expect = 6.8 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -3 Query: 187 AVGVWRIWPRWPED 146 AV WR W RW ED Sbjct: 710 AVATWRAWSRWQED 723
>AK109924:Os11g0538400 | Length = 610 Score = 27.3 bits (59), Expect = 6.9 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = +1 Query: 91 PPRKAELTLATHHRRQHRRLLANVAKSAKPQ--QRHWDLLV*DHRSELRPHRNQRR 252 PPR+ L HHRR R LLA + + Q Q DL D R HR ++R Sbjct: 451 PPRRRASPLPRHHRRAPRALLALPPQLPRRQVPQAEGDLPQGDRR-----HRQRQR 501
>AK120437:Os11g0620100 | Length = 441 Score = 26.9 bits (58), Expect = 8.9 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 84 SKPAEEGRAHSCYTPPAPAPASSG 155 SKP G A + PPAPAP + G Sbjct: 358 SKPTPPGTASAPLPPPAPAPFNPG 381
>AK107324:Os11g0620100 | Length = 432 Score = 26.9 bits (58), Expect = 8.9 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 84 SKPAEEGRAHSCYTPPAPAPASSG 155 SKP G A + PPAPAP + G Sbjct: 358 SKPTPPGTASAPLPPPAPAPFNPG 381
>AK099639:Os11g0620100 | Length = 441 Score = 26.9 bits (58), Expect = 8.9 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 84 SKPAEEGRAHSCYTPPAPAPASSG 155 SKP G A + PPAPAP + G Sbjct: 358 SKPTPPGTASAPLPPPAPAPFNPG 381
>AK064742:Os01g0356900 | Length = 503 Score = 26.9 bits (58), Expect = 8.9 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +3 Query: 87 KPAEEGRAHSCYTPPAPAPASS 152 KPA E HS PP PAP S Sbjct: 405 KPAPESSKHSPPPPPPPAPVQS 426
>AK060913:Os11g0620100 | Length = 300 Score = 26.9 bits (58), Expect = 8.9 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 84 SKPAEEGRAHSCYTPPAPAPASSG 155 SKP G A + PPAPAP + G Sbjct: 217 SKPTPPGTASAPLPPPAPAPFNPG 240
>AK101144:Os06g0688100 | Length = 622 Score = 26.9 bits (58), Expect = 9.0 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 361 WVQHSHFPALSGSPQICSLEFTFSLEPIFNQQCDD 465 + Q F A S P+IC LEF L IF ++ +D Sbjct: 327 FAQFIMFYACSLDPEICGLEFALFLSDIFIKKEED 361
>AK073794:Os06g0688100 | Length = 319 Score = 26.9 bits (58), Expect = 9.0 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 361 WVQHSHFPALSGSPQICSLEFTFSLEPIFNQQCDD 465 + Q F A S P+IC LEF L IF ++ +D Sbjct: 24 FAQFIMFYACSLDPEICGLEFALFLSDIFIKKEED 58 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 12,769,674 Number of extensions: 237546 Number of successful extensions: 972 Number of sequences better than 10.0: 14 Number of HSP's gapped: 971 Number of HSP's successfully gapped: 15 Length of query: 184 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 90 Effective length of database: 11,636,001 Effective search space: 1047240090 Effective search space used: 1047240090 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
