ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf71g18 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os06g46690:12006.t04355:unspliced-genomic catalytic/ transferase, transferring glycosyl groups, putative,| expressed Length = 4418 Score = 32.2 bits (64), Expect(2) = 0.12 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 / +2 Query: 91 PPRKAELTLATHHRRQHRRL 150 PPR+ L H RRQHRRL Sbjct: 2513 PPRRGARLLPPHQRRQHRRL 2572 Score = 26.3 bits (51), Expect(2) = 0.12 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +2 / +3 Query: 323 PQPRRS*LAVLSHGCSTPT 379 P PRRS A S C+TPT Sbjct: 3513 PLPRRSYAATPSASCATPT 3569
>LOC_Os02g02190:12002.t00119:unspliced-genomic high affinity nitrate transporter, putative, expressed| Length = 1860 Score = 35.9 bits (72), Expect = 0.23 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +1 / +1 Query: 91 PPRKAELTLATHHRRQHRRLLANVAKSAKPQQRHWDLLV*DHRSELRPHR 240 PP + HHR++HRR+L + P++RH ++ + PHR Sbjct: 949 PPLRLLHGRRAHHRQRHRRVLLRSLRPRPPRRRHHRRILRHGQHRRAPHR 1098
>LOC_Os02g02170:12002.t00117:unspliced-genomic high affinity nitrate transporter, putative, expressed| Length = 1922 Score = 35.9 bits (72), Expect = 0.23 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +1 / +3 Query: 91 PPRKAELTLATHHRRQHRRLLANVAKSAKPQQRHWDLLV*DHRSELRPHR 240 PP + HHR++HRR+L + P++RH ++ + PHR Sbjct: 954 PPLRLLHGRRAHHRQRHRRVLLRSLRPRPPRRRHHRRILRHGQHRRAPHR 1103
>LOC_Os04g11350:12004.t00963:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5017 Score = 35.4 bits (71), Expect = 0.31 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +1 / +2 Query: 91 PPRKAELTLATHHRRQHRRLLANVAKSAKPQQRHWDLLV*DHRSELRPHR 240 PP++ L LA R++ RRL+A + + +PQ+ H V D R P R Sbjct: 1925 PPQRLALLLAGPARQEGRRLVAFLRRLPRPQRPHRQGRVPDSRRRRAPRR 2074
>LOC_Os12g44090:12012.t04075:unspliced-genomic ATP binding protein, putative, expressed| Length = 3903 Score = 35.0 bits (70), Expect = 0.42 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +3 / -1 Query: 93 AEEGRAHSCYTPPAPAPASSGQRGQI 170 A RAHSC +P PASSGQR + Sbjct: 3633 AARSRAHSCRETGSPPPASSGQRSSM 3556
>LOC_Os01g51310:12001.t04565:unspliced-genomic expressed protein| Length = 1159 Score = 26.3 bits (51), Expect(2) = 0.50 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 / +1 Query: 126 PPAPAPASSGQRGQIRQTP 182 PPAP P+++ R R TP Sbjct: 412 PPAPTPSATRARSSRRSTP 468 Score = 25.8 bits (50), Expect(2) = 0.50 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = +3 / +3 Query: 96 EEGRAHSCYTPPAPAP 143 E R H Y PP PAP Sbjct: 270 EPQRCHDQYAPPPPAP 317
>LOC_Os11g25040:12011.t02123:unspliced-genomic plant-specific domain TIGR01615 family protein, expressed| Length = 1232 Score = 34.1 bits (68), Expect = 0.80 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = +1 / -2 Query: 91 PPRKAELTLATHHRRQHRRLLANVAKSAKPQQR 189 PPR+ A HHRR HRR V PQ R Sbjct: 385 PPRRRRSGGADHHRRPHRRRPERVRSRRPPQPR 287
>LOC_Os04g40420:12004.t05424:unspliced-genomic ATSWI3A, putative, expressed| Length = 4800 Score = 33.6 bits (67), Expect = 1.1 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 / +1 Query: 81 TSKPAEEGRAHSCYTPPAPAPASSGQRGQIRQTPT 185 +S P+ RA S PP PAP S G+ R+ P+ Sbjct: 619 SSSPSSTPRASSTSPPPPPAPRRSSSSGRRRRRPS 723
>LOC_Os04g34530:12004.t03128:unspliced-genomic nodulin protein, putative, expressed| Length = 5318 Score = 33.6 bits (67), Expect = 1.1 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 / +3 Query: 90 PAEEGRAHSCYTPPAPAPASSGQRGQI 170 PA SC PP+ AP+ S +RGQ+ Sbjct: 231 PASSSPTASCSPPPSSAPSPSSERGQV 311
>LOC_Os08g07010:12008.t00590:unspliced-genomic ABC-2 type transporter family protein, expressed| Length = 5116 Score = 33.6 bits (67), Expect = 1.1 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +1 / +3 Query: 91 PPRKAELTLATHHRRQHRR 147 PPR+A+L HHRRQ RR Sbjct: 1416 PPRRADLRARLHHRRQDRR 1472
>LOC_Os03g50120:12003.t04356:unspliced-genomic expressed protein| Length = 5066 Score = 33.1 bits (66), Expect = 1.5 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -3 / -3 Query: 547 FFFSHATVSYQHVLGKIITDQRELKNSYRHIAD*RLAQ 434 +FFSH+TV Y L K T +LK +R + + R A+ Sbjct: 2859 YFFSHSTVEYTRSLRKNQTHTAQLKQKFRKLNNLREAK 2746
>LOC_Os07g38550:12007.t03520:unspliced-genomic expressed protein| Length = 2224 Score = 33.1 bits (66), Expect = 1.5 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +1 / -1 Query: 94 PRKAELTLATHHRRQHRRLLANVAKSAKPQQR 189 P + EL LA H RR+ RRL+ + A K QR Sbjct: 1567 PLRNELLLARHRRRRRRRLVLHDASHCKLDQR 1472
>LOC_Os06g06200:12006.t00506:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2524 Score = 33.1 bits (66), Expect = 1.5 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 / +2 Query: 91 PPRKAELTLATHHRRQHRRLLANVAKSAKP 180 PP L L HRR+HRRL A+ + S P Sbjct: 2276 PPGARPLRLGVRHRRRHRRLRADRSGSVAP 2365
>LOC_Os01g04250:12001.t00313:unspliced-genomic expressed protein| Length = 2991 Score = 33.1 bits (66), Expect = 1.5 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 / -3 Query: 109 LTLATHHRRQHRRLLANVAKSAKPQQRHW 195 +TL+T HR HR L+++ S K Q R W Sbjct: 1120 VTLSTFHRTLHRHLISHADGSTKLQPRGW 1034
>LOC_Os03g27460:12003.t02422:unspliced-genomic heat shock protein binding protein, putative, expressed| Length = 4138 Score = 27.2 bits (53), Expect(2) = 2.0 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 / +1 Query: 185 SATGTSWSEITARSSAPTGISAARS 259 ++T TS S ARSSAPT ++A S Sbjct: 583 TSTSTSASSWGARSSAPTSLAARGS 657 Score = 22.6 bits (43), Expect(2) = 2.0 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +3 / +1 Query: 126 PPAPAPASSGQRGQIRQTPT 185 PP P P SSG+ + T T Sbjct: 532 PPPPNPPSSGRLARSAPTST 591
>LOC_Os06g28770:12006.t02581:unspliced-genomic conserved hypothetical protein| Length = 1870 Score = 32.7 bits (65), Expect = 2.1 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +3 / -2 Query: 78 VTSKPAEEGRAHSCYTPPAPAPASSGQRGQIR 173 V S P A S PPAP+P +S +RG R Sbjct: 591 VASSPGSPSTASSTSRPPAPSPTTSTRRGPRR 496
>LOC_Os03g52880:12003.t04610:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 3031 Score = 32.7 bits (65), Expect = 2.1 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +3 / +2 Query: 102 GRAHSCYTPPAPAPASSGQRG 164 GRA SC TP AP+PA G+ G Sbjct: 1106 GRAASCRTPGAPSPACRGRCG 1168
>LOC_Os01g73180:12001.t06600:unspliced-genomic hypothetical protein| Length = 270 Score = 32.7 bits (65), Expect = 2.1 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 / +2 Query: 137 STGVFWPTWXXXXXXXSATGTSWSEITARSSAPTGISAARS 259 +T V+WP+W SA+ +SW TA + P S++ S Sbjct: 29 TTTVWWPSWPA*LSRQSASASSW*STTAPTMEPLPSSSSPS 151
>LOC_Os05g31490:12005.t02746:unspliced-genomic expressed protein| Length = 4787 Score = 31.3 bits (62), Expect(2) = 2.5 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +3 / +3 Query: 81 TSKPAEEGRAHSCYTPPAPAPASS 152 +S P RAH+ TPP P+P SS Sbjct: 486 SSPPISPRRAHTSRTPPPPSPPSS 557 Score = 22.6 bits (43), Expect(2) = 2.5 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = +1 / +2 Query: 388 LSGSPQICSLEFTFSLEPIFNQQCDDMN 471 +S P + S + + SLE I+ CD ++ Sbjct: 3632 VSTLPNVTSEKLSKSLEAIYTVACDSVS 3715
>LOC_Os10g40660:12010.t03308:unspliced-genomic cys2/His2 zinc-finger transcription factor, putative, expressed| Length = 1692 Score = 32.2 bits (64), Expect = 2.8 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 / +2 Query: 96 EEGRAHSCYTPPAPAPASSGQRGQIRQTP 182 + G+ C PP PAPASS I + P Sbjct: 1085 KRGKGGGCVPPPRPAPASSAAAPAIHECP 1171
>LOC_Os08g31900:12008.t02935:unspliced-genomic conserved hypothetical protein| Length = 1666 Score = 32.2 bits (64), Expect = 2.8 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 / +2 Query: 81 TSKPAEEGRAHSCYTPPAPAPASSGQRGQIRQ 176 +S P RA + PPA APA S +RG+ R+ Sbjct: 1466 SSPPLAGRRATPAFPPPAAAPALSARRGRERE 1561
>LOC_Os07g49200:12007.t04548:unspliced-genomic conserved hypothetical protein| Length = 706 Score = 32.2 bits (64), Expect = 2.8 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = +2 / +2 Query: 152 WPTWXXXXXXXSATGTSWSEITARSSA 232 WP W +ATGT WS RS A Sbjct: 194 WPWWPWRSWPHAATGTGWSSRATRSIA 274
>LOC_Os02g21110:12002.t01901:unspliced-genomic kelch motif family protein, expressed| Length = 4540 Score = 32.2 bits (64), Expect = 2.8 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +3 / +3 Query: 81 TSKPAEEGRAHSCYTPPAPAPASSGQRGQIRQTPT 185 +S P SC TPP P P +R + R++ T Sbjct: 336 SSPPTPPSPPRSCSTPPRPPPGGPSRRSRARRSTT 440
>LOC_Os01g51540:12001.t04586:unspliced-genomic CDA1, putative, expressed| Length = 1385 Score = 29.9 bits (59), Expect(2) = 3.6 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 / +3 Query: 239 RWGRSSER*SQTKRSQWRCWG 177 +WGR R S T +W CWG Sbjct: 117 QWGRRKWRRSLTLPRRWSCWG 179 Score = 21.7 bits (41), Expect(2) = 3.6 Identities = 5/5 (100%), Positives = 5/5 (100%) Frame = -3 / +3 Query: 166 WPRWP 152 WPRWP Sbjct: 996 WPRWP 1010
>LOC_Os04g05580:12004.t00439:unspliced-genomic protein kinase, putative, expressed| Length = 4327 Score = 25.4 bits (49), Expect(2) = 3.7 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +1 / +3 Query: 217 RSELRPHRNQRR 252 R ELRPHR +RR Sbjct: 486 RPELRPHRRRRR 521 Score = 23.5 bits (45), Expect(2) = 3.7 Identities = 14/48 (29%), Positives = 19/48 (39%) Frame = +2 / +2 Query: 89 ARRGRPSSLLLHTTGASTGVFWPTWXXXXXXXSATGTSWSEITARSSA 232 ARRG + L +G WP S+ T+W TA S+ Sbjct: 305 ARRGACPTAALCHSGTEPPTRWPASPPSSPSRSSPRTTWPGETAWPSS 448
>LOC_Os05g04360:12005.t00332:unspliced-genomic protein phosphatase 2C homolog 2, putative, expressed| Length = 2661 Score = 24.4 bits (47), Expect(2) = 3.8 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +3 / -2 Query: 90 PAEEGRAHSCYTPPAPAP 143 P + G +S +PP PAP Sbjct: 2336 PPQRGSCNSSASPPPPAP 2283 Score = 24.4 bits (47), Expect(2) = 3.8 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +3 / -2 Query: 126 PPAPAPASSGQRGQIRQTPT 185 PPAPA A+ R R++P+ Sbjct: 2282 PPAPAAATQAPRRSRRRSPS 2223
>LOC_Os06g06910:12006.t00576:unspliced-genomic expressed protein| Length = 1320 Score = 31.8 bits (63), Expect = 3.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +3 / +2 Query: 81 TSKPAEEGRAHSCYTPPAPAPASSGQRGQIRQTP 182 T+ P R+ S TPP P PAS+G TP Sbjct: 47 TTSPPPPPRSSSSSTPPPPPPASAGASTSRNWTP 148
>LOC_Os03g24490:12003.t02144:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 9171 Score = 31.8 bits (63), Expect = 3.9 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +1 / +1 Query: 91 PPRKAELTLATHHRRQHRRLLANVAKSAKPQQRH 192 PPR A A HRR+ +R A A SA P H Sbjct: 4057 PPRHAAAFAAAQHRRRMQRHAAAAAPSAGPMPPH 4158
>LOC_Os12g08130:12012.t00695:unspliced-genomic amino acid transporter, putative, expressed| Length = 2069 Score = 24.4 bits (47), Expect(2) = 5.2 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +3 / +2 Query: 93 AEEGRAHSCYTPPAPAPASSGQRGQIR 173 A GR +PP+ APA RG+ R Sbjct: 182 ARSGRRARTSSPPSSAPACCRWRGRSR 262 Score = 24.0 bits (46), Expect(2) = 5.2 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +2 / +2 Query: 185 SATGTSWSEITARSSAPTGISAARS 259 SAT +W+ S+AP SAA S Sbjct: 374 SATTPTWTPCAPTSAAPRSPSAASS 448
>LOC_Os04g47150:12004.t04242:unspliced-genomic subtilisin-like protease precursor, putative, expressed| Length = 2896 Score = 31.3 bits (62), Expect = 5.4 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +3 / -3 Query: 81 TSKPAEEGRAHSCYTPPAPAPASSGQRGQIRQ 176 TS P G +T P P PAS G+R R+ Sbjct: 467 TSSPGRRG*TSRSWTSPPPPPASGGRRSH*RR 372
>LOC_Os03g30780:12003.t02684:unspliced-genomic hypothetical protein| Length = 733 Score = 31.3 bits (62), Expect = 5.4 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 / -1 Query: 105 RAHSCYTPPAPAPASSGQRGQIRQT 179 R+ SC+T P PA S+G RG I T Sbjct: 271 RSSSCWTRPGPACCSTGGRGGILPT 197
>LOC_Os03g16800:12003.t01462:unspliced-genomic clathrin assembly protein, putative, expressed| Length = 3035 Score = 31.3 bits (62), Expect = 5.4 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 / +1 Query: 81 TSKPAEEGRAHSCYTPPAPAPAS 149 TS+P + A S +PPAPAP S Sbjct: 913 TSRPRSDTSARSSTSPPAPAPTS 981
>LOC_Os09g12290:12009.t01019:unspliced-genomic bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast| precursor, putative, expressed Length = 14468 Score = 31.3 bits (62), Expect = 5.4 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +1 / +3 Query: 91 PPRKAELTLATHHRRQHRRLLANVAKSAKPQQR 189 PP +A + L HHR H + A A+P++R Sbjct: 14004 PPLRAAVRLRQHHRLHHVEVQGAAADRARPRRR 14102
>LOC_Os02g47730:12002.t04357:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7658 Score = 31.3 bits (62), Expect = 5.4 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 / -1 Query: 94 PRKAELTLATHHRRQHRRLLANVAKSAKPQQRHWDL 201 P AEL+ A+H R + L A V+ + RHW L Sbjct: 230 PHLAELSRASHRSRAVQPLAAAVSATPAAASRHWGL 123
>LOC_Os04g57250:12004.t05191:unspliced-genomic retinitis pigmentosa GTPase regulator, putative| Length = 627 Score = 24.4 bits (47), Expect(2) = 5.7 Identities = 11/19 (57%), Positives = 11/19 (57%) Frame = +1 / -3 Query: 184 QRHWDLLV*DHRSELRPHR 240 QRH LL HR RPHR Sbjct: 523 QRHRHLLPLQHRRLPRPHR 467 Score = 24.0 bits (46), Expect(2) = 5.7 Identities = 6/12 (50%), Positives = 11/12 (91%) Frame = +3 / -2 Query: 117 CYTPPAPAPASS 152 C++PP+P P++S Sbjct: 614 CHSPPSPPPSAS 579
>LOC_Os05g44760:12005.t03964:unspliced-genomic hexokinase-2, putative, expressed| Length = 5643 Score = 25.8 bits (50), Expect(2) = 6.5 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +1 / -2 Query: 124 HHRRQHRRLLANVAKSAKP 180 HHRR HRR L + SA P Sbjct: 212 HHRRPHRRRLPHHRCSAFP 156 Score = 22.1 bits (42), Expect(2) = 6.5 Identities = 7/18 (38%), Positives = 7/18 (38%) Frame = +3 / -2 Query: 90 PAEEGRAHSCYTPPAPAP 143 P G H PP P P Sbjct: 302 PLRRGSLHQLQVPPPPPP 249
>LOC_Os05g03040:12005.t00201:unspliced-genomic floral homeotic protein APETALA2, putative, expressed| Length = 4290 Score = 24.9 bits (48), Expect(2) = 6.6 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = +1 / +3 Query: 124 HHRRQHRRLLANVAKSAKPQQRHW 195 HH+ Q + + SA P +HW Sbjct: 837 HHQHQQLLVTRELFPSAAPSPQHW 908 Score = 23.1 bits (44), Expect(2) = 6.6 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 / +3 Query: 90 PAEEGRAHSCYTPPAPAPA 146 PAEEG + + +PP P A Sbjct: 681 PAEEGSSSTPPSPPPPPAA 737
>LOC_Os12g40480:12012.t03727:unspliced-genomic protein binding protein, putative, expressed| Length = 3399 Score = 24.4 bits (47), Expect(2) = 6.7 Identities = 9/20 (45%), Positives = 10/20 (50%) Frame = +3 / -2 Query: 84 SKPAEEGRAHSCYTPPAPAP 143 S PA SC +PP P P Sbjct: 818 SSPAARTPRRSCASPPPPPP 759 Score = 23.5 bits (45), Expect(2) = 6.7 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = +3 / -2 Query: 126 PPAPAPASSGQRGQIRQTP 182 PP P PA++ R + R+ P Sbjct: 770 PPPPPPAAAAARRERRRRP 714
>LOC_Os11g26990:12011.t02314:unspliced-genomic expressed protein| Length = 2458 Score = 30.9 bits (61), Expect = 7.4 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +3 / +2 Query: 81 TSKPAEEGRAHSCYTPPAPAPASSGQRGQIR 173 +S P S +PPAPAPA+ G R + R Sbjct: 212 SSPPPRSSSPSSSPSPPAPAPAAGGTRRRSR 304
>LOC_Os04g45920:12004.t04124:unspliced-genomic protein kinase APK1B, chloroplast precursor, putative, expressed| Length = 2680 Score = 30.9 bits (61), Expect = 7.4 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -2 / -3 Query: 536 TCNSFISTRAGKNYHGSKGTKKFISSHC*LKIGSRLKVN 420 +CN F S K YH S K F S C + + S ++N Sbjct: 2261 SCNLFFSKPVTKKYHLSTKKKSFRSQSCIVIVNSDKRMN 2145
>LOC_Os04g45910:12004.t04123:unspliced-genomic placental protein 11 precursor, putative, expressed| Length = 4190 Score = 30.9 bits (61), Expect = 7.4 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -2 / +1 Query: 536 TCNSFISTRAGKNYHGSKGTKKFISSHC*LKIGSRLKVN 420 +CN F S K YH S K F S C + + S ++N Sbjct: 3748 SCNLFFSKPVTKKYHLSTKKKSFRSQSCIVIVNSDKRMN 3864
>LOC_Os03g57490:12003.t05016:unspliced-genomic fasciclin domain, putative, expressed| Length = 4470 Score = 30.9 bits (61), Expect = 7.4 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +3 / -3 Query: 126 PPAPAPASSGQRGQIRQT 179 PPAP+P GQRG+ R T Sbjct: 328 PPAPSPRPHGQRGERRST 275
>LOC_Os01g52290:12001.t04656:unspliced-genomic expressed protein| Length = 2022 Score = 30.9 bits (61), Expect = 7.4 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +2 / -3 Query: 155 PTWXXXXXXXSATGTSWSEITARSSAPTGISAA 253 P W TG SWS A + P G SAA Sbjct: 1615 PAWRGTRCRSRGTGRSWSSRPASTGTPGGCSAA 1517
>LOC_Os01g08330:12001.t00711:unspliced-genomic aspartic proteinase nepenthesin-1 precursor, putative| Length = 1365 Score = 30.9 bits (61), Expect = 7.4 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 / +2 Query: 81 TSKPAEEGRAHSCYTPPAPAPASSGQRG 164 TS P GR +PP P+P+++ RG Sbjct: 539 TSTPTATGRTPPASSPPKPSPSTTAARG 622
>LOC_Os08g26270:12008.t02393:unspliced-genomic hypothetical protein| Length = 356 Score = 30.9 bits (61), Expect = 7.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +1 / +1 Query: 124 HHRRQHRRLLANVAKSAKPQQRHWDLL 204 H RRQ RR ++A QQR W +L Sbjct: 154 HRRRQQRRSRRTQTRAASRQQRSWHML 234
>LOC_Os07g09710:12007.t00845:unspliced-genomic F-box domain containing protein, expressed| Length = 2194 Score = 30.9 bits (61), Expect = 7.4 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = +1 / +1 Query: 91 PPRKAELTLATHHRRQHRRLLANVAKSAKPQQR 189 PPR+ ++ HHRR RR P++R Sbjct: 709 PPRRVQVVAGAHHRRDVRRRARRAPPRPAPRRR 807
>LOC_Os04g58790:12004.t05340:unspliced-genomic conserved hypothetical protein| Length = 246 Score = 30.9 bits (61), Expect = 7.4 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +1 / -1 Query: 124 HHRRQHRRLLANVAKSAKPQQR 189 HHR +HRRLL V + A+ ++R Sbjct: 84 HHRLRHRRLLLRVRRHARARRR 19
>LOC_Os03g22880:12003.t02035:unspliced-genomic nucleolar protein Nop56, putative, expressed| Length = 2943 Score = 30.9 bits (61), Expect = 7.4 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = +1 / +1 Query: 109 LTLATHHRRQHRRLLANVAKSAKPQQRHWDLLV*DHRSELRPHRNQRRTV 258 + L+ RR+ RR + +S + ++R W + + R + P R +RRTV Sbjct: 2467 MKLSLELRRRKRRRSTSWRRSHRSRRRAWRMPMATPRRTVLPRRRRRRTV 2616
>LOC_Os05g08160:12005.t00696:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3177 Score = 24.9 bits (48), Expect(2) = 9.1 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +1 / +3 Query: 139 HRRLLANVAKSAKP 180 H RLL N+ KS+KP Sbjct: 1032 HFRLLGNIQKSSKP 1073 Score = 22.6 bits (43), Expect(2) = 9.1 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = +1 / +3 Query: 193 WDLLV*DHRSELRP 234 WD+ HRS LRP Sbjct: 1173 WDVTEKQHRSALRP 1214
>LOC_Os05g39930:12005.t03533:unspliced-genomic spotted leaf protein 11, putative, expressed| Length = 2633 Score = 24.4 bits (47), Expect(2) = 9.2 Identities = 6/8 (75%), Positives = 6/8 (75%) Frame = -3 / +1 Query: 175 WRIWPRWP 152 WR W RWP Sbjct: 1753 WRCWRRWP 1776 Score = 23.1 bits (44), Expect(2) = 9.2 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = -2 / +1 Query: 218 R*SQTKRSQWRCW 180 R S +R WRCW Sbjct: 1726 RRSARRRPPWRCW 1764
>LOC_Os06g50940:12006.t04778:unspliced-genomic anther-specific proline-rich protein APG precursor, putative,| expressed Length = 2126 Score = 26.7 bits (52), Expect(2) = 9.4 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 / -1 Query: 123 TPPAPAPASSGQRGQIRQTPT 185 TPPAPA + S R + R+ PT Sbjct: 305 TPPAPAASCSDGRRRRRRPPT 243 Score = 24.0 bits (46), Expect(2) = 9.4 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 / -1 Query: 84 SKPAEEGRAHSCYTPPA 134 S+P+ RA S TPPA Sbjct: 1478 SRPSRSPRARSARTPPA 1428 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 182,047,005 Number of extensions: 2463464 Number of successful extensions: 16540 Number of sequences better than 10.0: 51 Length of query: 184 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 136 Effective length of database: 52,912,542 Effective search space: 7196105712 Effective search space used: 7196105712 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
