ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf71g18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP006401.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT18E13, TM0283, complete sequence Length = 112721 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccaccac 306 ||||||||||||||||||||||| Sbjct: 70914 accgccgcctccgccaccaccac 70892
>emb|CT835602.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN031D02, full insert sequence Length = 684 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccac 306 |||||||||||||||||||||| Sbjct: 290 ccgccgcctccgccaccaccac 269
>ref|XM_369714.1| Magnaporthe grisea 70-15 hypothetical protein (MG06229.4) partial mRNA Length = 777 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccac 306 |||||||||||||||||||||| Sbjct: 662 ccgccgcctccgccaccaccac 641
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccaccac 306 |||||||||||||||||||||| Sbjct: 24878 ccgccgcctccgccaccaccac 24899
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccaccac 306 |||||||||||||||||||||| Sbjct: 8060765 ccgccgcctccgccaccaccac 8060786
>emb|AJ400821.1|CRU400821 Capsella rubella ORF1, ORF2, ORF3, ORF4, ORF5 and ORF6 (partial) Length = 26241 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccac 306 |||||||||||||||||||||| Sbjct: 20852 ccgccgcctccgccaccaccac 20831
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccac 306 |||||||||||||||||||||| Sbjct: 6120959 ccgccgcctccgccaccaccac 6120938
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccaccac 306 |||||||||||||||||||||| Sbjct: 57416 ccgccgcctccgccaccaccac 57437
>ref|XM_313629.2| Anopheles gambiae str. PEST ENSANGP00000012671 (ENSANGG00000010182), mRNA Length = 1000 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccac 306 |||||||||||||||||||||| Sbjct: 153 ccgccgcctccgccaccaccac 132
>ref|NM_001063599.1| Oryza sativa (japonica cultivar-group) Os06g0199000 (Os06g0199000) mRNA, complete cds Length = 1107 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccacc 304 ||||||||||||||||||||| Sbjct: 390 accgccgcctccgccaccacc 370
>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome Length = 3705021 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cgccgcctccgccaccaccac 306 ||||||||||||||||||||| Sbjct: 2074684 cgccgcctccgccaccaccac 2074664 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 2074661 ccgccgcctccgccaccacc 2074642
>ref|XM_510870.2| PREDICTED: Pan troglodytes similar to IMAA protein (LOC453981), mRNA Length = 2553 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 cacaccaccggcgccagcaccggcg 146 |||||||||||||||||| |||||| Sbjct: 339 cacaccaccggcgccagccccggcg 315
>ref|XM_001146143.1| PREDICTED: Pan troglodytes similar to IMAA protein (LOC742193), mRNA Length = 1381 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 cacaccaccggcgccagcaccggcg 146 |||||||||||||||||| |||||| Sbjct: 355 cacaccaccggcgccagccccggcg 331
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tgctggctcaggctctcctta 54 ||||||||||||||||||||| Sbjct: 7260969 tgctggctcaggctctcctta 7260949 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 8806177 ccgccgcctccgccaccacc 8806158
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cgccgcctccgccaccaccac 306 ||||||||||||||||||||| Sbjct: 19475457 cgccgcctccgccaccaccac 19475437 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 cgaaccgccgcctccgccaccacc 304 |||||||||||| ||||||||||| Sbjct: 10501420 cgaaccgccgccaccgccaccacc 10501443
>ref|XM_343825.3| PREDICTED: Rattus norvegicus midline 2 (predicted) (Mid2_predicted), mRNA Length = 2965 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactct 309 |||||||| |||||||||||||||| Sbjct: 183 ccgccgccgccgccaccaccactct 159
>gb|BC118372.1| Bos taurus cDNA clone IMAGE:8272069, partial cds Length = 996 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccacc 304 ||||||||||||||||||||| Sbjct: 254 accgccgcctccgccaccacc 274
>ref|XM_001053301.1| PREDICTED: Rattus norvegicus midline 2 (predicted) (Mid2_predicted), mRNA Length = 3148 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactct 309 |||||||| |||||||||||||||| Sbjct: 366 ccgccgccgccgccaccaccactct 342
>gb|AC093098.2| Drosophila melanogaster clone BACR29G22, complete sequence Length = 153749 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tgctggctcaggctctcctta 54 ||||||||||||||||||||| Sbjct: 51575 tgctggctcaggctctcctta 51595
>ref|XM_582315.2| PREDICTED: Bos taurus similar to serine/arginine-rich protein specific kinase 2 (LOC505945), mRNA Length = 1281 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccacc 304 ||||||||||||||||||||| Sbjct: 402 accgccgcctccgccaccacc 422
>gb|AY190954.1| Drosophila virilis clone DVIF01_17_B21 (D1423) genomic sequence Length = 43155 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccacc 304 ||||||||||||||||||||| Sbjct: 41342 accgccgcctccgccaccacc 41322
>gb|AC124466.3| Mus musculus BAC clone RP24-160P1 from chromosome 18, complete sequence Length = 169529 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccaccactct 309 |||||||| |||||||||||||||| Sbjct: 117013 ccgccgccgccgccaccaccactct 117037
>ref|NM_134476.1| Drosophila melanogaster CG14218-RA (CG14218), mRNA Length = 1047 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 cgccgcctccgccaccaccac 306 ||||||||||||||||||||| Sbjct: 230 cgccgcctccgccaccaccac 250
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 ccaccggcgccagcaccggcg 146 ||||||||||||||||||||| Sbjct: 694457 ccaccggcgccagcaccggcg 694437
>dbj|AK140171.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230326A14 product:unclassifiable, full insert sequence Length = 1986 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactct 309 |||||||| |||||||||||||||| Sbjct: 206 ccgccgccgccgccaccaccactct 182
>gb|AE012485.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 393 of 460 of the complete genome Length = 12189 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 ccaccggcgccagcaccggcg 146 ||||||||||||||||||||| Sbjct: 2175 ccaccggcgccagcaccggcg 2195
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cgccgcctccgccaccaccac 306 ||||||||||||||||||||| Sbjct: 20011282 cgccgcctccgccaccaccac 20011262
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccacc 304 ||||||||||||||||||||| Sbjct: 5034299 accgccgcctccgccaccacc 5034279
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccaccactc-tcgccgccgcc 319 |||||||||||| ||||||||| || ||||||||||| Sbjct: 23184359 accgccgcctccaccaccaccagtcgtcgccgccgcc 23184323 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gccgcctccgccaccaccac 306 |||||||||||||||||||| Sbjct: 31539786 gccgcctccgccaccaccac 31539805
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 ccaccggcgccagcaccggcg 146 ||||||||||||||||||||| Sbjct: 4397437 ccaccggcgccagcaccggcg 4397457
>emb|X93605.1|ZMPDHBGEN Zymomonas mobilis pdhB & lpd genes & ORF's 4,5,6,7 & 8 Length = 8238 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccacc 304 ||||||||||||||||||||| Sbjct: 3562 accgccgcctccgccaccacc 3582
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cgccgcctccgccaccaccac 306 ||||||||||||||||||||| Sbjct: 122574 cgccgcctccgccaccaccac 122554
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccacc 304 ||||||||||||||||||||| Sbjct: 76413 accgccgcctccgccaccacc 76393
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 42.1 bits (21), Expect = 2.0 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccaccactc-tcgccgccgcc 319 |||||||||||| ||||||||| || ||||||||||| Sbjct: 41590 accgccgcctccaccaccaccagtcgtcgccgccgcc 41554
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0477F03 Length = 176120 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cgccgcctccgccaccaccac 306 ||||||||||||||||||||| Sbjct: 83133 cgccgcctccgccaccaccac 83113
>dbj|AK106381.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D12, full insert sequence Length = 1107 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccacc 304 ||||||||||||||||||||| Sbjct: 390 accgccgcctccgccaccacc 370
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 ccaccggcgccagcaccggcg 146 ||||||||||||||||||||| Sbjct: 724917 ccaccggcgccagcaccggcg 724897
>emb|AL683809.7| Mouse DNA sequence from clone RP23-440B21 on chromosome X, complete sequence Length = 213187 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactct 309 |||||||| |||||||||||||||| Sbjct: 145098 ccgccgccgccgccaccaccactct 145074
>ref|NM_011845.1| Mus musculus midline 2 (Mid2), mRNA emb|Y18881.1|MMU18881 Mus musculus mRNA for MID2 protein Length = 3955 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactct 309 |||||||| |||||||||||||||| Sbjct: 199 ccgccgccgccgccaccaccactct 175
>emb|AL672085.6| Mouse DNA sequence from clone RP23-2E6 on chromosome X, complete sequence Length = 56345 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 288 ccgcctccgccaccaccactctcgccgccgcca 320 ||||| |||||||||||||| ||||||||||| Sbjct: 29964 ccgccgccgccaccaccactgccgccgccgcca 29996
>ref|XM_001009873.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00161450) mRNA, complete cds Length = 165 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 agccaatcttcaatcagcaa 456 |||||||||||||||||||| Sbjct: 12 agccaatcttcaatcagcaa 31
>ref|XM_001008348.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00013690) mRNA, complete cds Length = 165 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 agccaatcttcaatcagcaa 456 |||||||||||||||||||| Sbjct: 12 agccaatcttcaatcagcaa 31
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 5464508 ccgccgcctccgccaccacc 5464527
>ref|XM_001226667.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_08741) mRNA, complete cds Length = 2511 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 1263 ccgccgcctccgccaccacc 1282
>ref|XR_024799.1| PREDICTED: Pan troglodytes hypothetical LOC455975 (LOC455975), mRNA Length = 1366 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccaccactctcgccgccgcc 319 |||||||||||| |||||||||| |||||||||| Sbjct: 199 accgccgcctccaccaccaccaccaccgccgccgcc 164
>ref|XM_001173043.1| PREDICTED: Pan troglodytes homeobox B4 (HOXB4), mRNA Length = 2033 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 282 ccgccgcctccgccaccacc 301
>ref|XM_292968.6| PREDICTED: Homo sapiens similar to Homeobox even-skipped homolog protein 2 (EVX-2) (LOC344191), mRNA Length = 1617 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactctcgccgccgcca 320 |||||||| ||||||||||||| ||||||||||| Sbjct: 1466 ccgccgccgccgccaccaccaccaccgccgccgcca 1431
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 8041180 ccgccgcctccgccaccacc 8041161
>tpg|BK000997.1| TPA_exp: Anopheles gambiae str. PEST Kurtz arrestin-like protein ArrK (ARRK) gene, partial cds Length = 20620 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 15638 ccgccgcctccgccaccacc 15657
>ref|XM_001122690.1| PREDICTED: Apis mellifera hypothetical protein LOC726974 (LOC726974), mRNA Length = 333 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccaccact 307 ||||||||| |||||||||||||| Sbjct: 78 accgccgccgccgccaccaccact 55
>ref|XR_014586.1| PREDICTED: Macaca mulatta similar to Protein Dos (Downstream of Stk11 protein) (LOC721208), mRNA Length = 2433 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 aaccgccgcctccgccaccaccac 306 |||||||||| ||||||||||||| Sbjct: 152 aaccgccgccgccgccaccaccac 175
>ref|XR_010388.1| PREDICTED: Macaca mulatta similar to homeobox B4 (LOC698030), mRNA Length = 1895 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 133 ccgccgcctccgccaccacc 152
>gb|DQ486030.2| Antheraea pernyi nucleopolyhedrovirus, complete genome Length = 126630 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctggccaacgtggccaaatc 170 |||||||||||||||||||| Sbjct: 76248 ctggccaacgtggccaaatc 76267
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caccggcgccagcaccggcg 146 |||||||||||||||||||| Sbjct: 2572779 caccggcgccagcaccggcg 2572760
>ref|NM_111247.2| Arabidopsis thaliana unknown protein (AT3G03760) mRNA, complete cds Length = 1058 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 cctccgccaccaccactctcgccg 314 |||||||| ||||||||||||||| Sbjct: 638 cctccgcctccaccactctcgccg 661
>gb|AY846749.1| Antheraea pernyi nucleopolyhedrovirus late expression factor 3 (lef-3) gene, complete cds; and unknown gene Length = 1934 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctggccaacgtggccaaatc 170 |||||||||||||||||||| Sbjct: 888 ctggccaacgtggccaaatc 907
>gb|AF287967.1| Homo sapiens homeobox B7 (HOXB7) gene, partial cds; and homeobox B6 (HOXB6), homeobox B5 (HOXB5), homeobox B4 (HOXB4), and homeobox B3 (HOXB3) genes, complete cds Length = 59339 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 29831 ccgccgcctccgccaccacc 29850
>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16, complete sequence Length = 137872 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 296 gccaccaccactctcgccgccgccagcc 323 |||||| |||| |||||||||||||||| Sbjct: 44218 gccaccgccaccctcgccgccgccagcc 44191
>gb|AC139171.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0024B09, complete sequence Length = 132563 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 gacgatatgaattttttagt 479 |||||||||||||||||||| Sbjct: 84496 gacgatatgaattttttagt 84477
>ref|NM_001003978.1| Rattus norvegicus G1 to S phase transition 1 (Gspt1), mRNA gb|BC079092.1| Rattus norvegicus G1 to S phase transition 1, mRNA (cDNA clone MGC:94063 IMAGE:7123818), complete cds Length = 2568 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 232 ccgccgcctccgccaccacc 213
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 289 cgcctccgccaccaccactctcgccgccgcca 320 |||| ||||||||||||| |||||||||||| Sbjct: 97388 cgccgccgccaccaccacattcgccgccgcca 97419
>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence Length = 182105 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 181931 ccgccgcctccgccaccacc 181912
>gb|BC062161.1| Mus musculus scleraxis, mRNA (cDNA clone MGC:70066 IMAGE:30138970), complete cds Length = 1048 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccaccact 307 ||||||||| |||||||||||||| Sbjct: 571 accgccgccgccgccaccaccact 594
>ref|NM_006236.1| Homo sapiens POU domain, class 3, transcription factor 3 (POU3F3), mRNA Length = 1503 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactctcgccgccgccagccc 324 |||||||| ||||| || |||| | ||||||||||||||| Sbjct: 122 ccgccgccgccgccgccgccacccccgccgccgccagccc 83
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 289 cgcctccgccaccaccactctcgccgccgcca 320 |||| ||||||||||||| |||||||||||| Sbjct: 4577 cgccgccgccaccaccacattcgccgccgcca 4608
>gb|AC157566.6| Mus musculus chromosome 15, clone RP23-415D19, complete sequence Length = 196738 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccaccact 307 ||||||||| |||||||||||||| Sbjct: 178297 accgccgccgccgccaccaccact 178274
>gb|BC063955.1| Danio rerio keratin 5, mRNA (cDNA clone MGC:77647 IMAGE:6996972), complete cds Length = 2403 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 aaccgccgcctccgccaccaccac 306 |||||||||| ||||||||||||| Sbjct: 266 aaccgccgccgccgccaccaccac 243
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cgaaccgccgcctccgccaccacc 304 |||||||||||| ||||||||||| Sbjct: 160856 cgaaccgccgccaccgccaccacc 160833
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ctccttatccttatcctact 67 |||||||||||||||||||| Sbjct: 12859 ctccttatccttatcctact 12840
>gb|AC129212.4| Mus musculus BAC clone RP24-373G21 from chromosome 15, complete sequence Length = 174846 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 aaccgccgcctccgccaccaccac 306 |||||||||| ||||||||||||| Sbjct: 47690 aaccgccgccgccgccaccaccac 47713
>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence, complete sequence Length = 101410 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 cctccgccaccaccactctcgccg 314 |||||||| ||||||||||||||| Sbjct: 72617 cctccgcctccaccactctcgccg 72594
>ref|NM_165961.1| Drosophila melanogaster lethal (2) 01424 CG3845-RA, transcript variant A (l(2)01424), mRNA Length = 5121 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 746 ccgccgcctccgccaccacc 727
>gb|AY338482.1| Mus musculus scleraxis gene, exons 1 and 2 and complete cds Length = 11071 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccaccact 307 ||||||||| |||||||||||||| Sbjct: 7808 accgccgccgccgccaccaccact 7831
>ref|NM_143770.2| Drosophila melanogaster lethal (2) 01424 CG3845-RB, transcript variant B (l(2)01424), mRNA Length = 5100 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 725 ccgccgcctccgccaccacc 706
>ref|NM_132412.1| Drosophila melanogaster CG9817-RA (CG9817), mRNA Length = 6497 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cgaaccgccgcctccgccaccacc 304 |||||||||||| ||||||||||| Sbjct: 3444 cgaaccgccgccaccgccaccacc 3421
>ref|NM_001038854.1| Drosophila melanogaster lethal (2) 01424 CG3845-RC, transcript variant C (l(2)01424), mRNA Length = 5121 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 746 ccgccgcctccgccaccacc 727
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 296 gccaccaccactctcgccgccgccagcc 323 |||||| |||| |||||||||||||||| Sbjct: 156102 gccaccgccaccctcgccgccgccagcc 156075
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccaccact 307 ||||||||| |||||||||||||| Sbjct: 288211 accgccgccaccgccaccaccact 288188
>gb|BT008589.1| Arabidopsis thaliana clone U50874 unknown protein (At3g03760) mRNA, complete cds Length = 853 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 cctccgccaccaccactctcgccg 314 |||||||| ||||||||||||||| Sbjct: 563 cctccgcctccaccactctcgccg 586
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 gaaccgccgcctccgccaccacca 305 ||||||||||| |||||||||||| Sbjct: 80884 gaaccgccgccgccgccaccacca 80907
>ref|XM_707399.1| Candida albicans SC5314 hypothetical protein (CaO19.6921) partial mRNA Length = 1821 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccaccact 307 ||||||||| |||||||||||||| Sbjct: 388 accgccgccaccgccaccaccact 411
>gb|AC103702.3| Homo sapiens chromosome 17, clone RP11-357H14, complete sequence Length = 187386 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 111399 ccgccgcctccgccaccacc 111418
>ref|XM_756413.1| Ustilago maydis 521 hypothetical protein (UM05359.1) partial mRNA Length = 2253 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ccaccggcgccagcaccggc 145 |||||||||||||||||||| Sbjct: 767 ccaccggcgccagcaccggc 748
>dbj|AK013456.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810490L08 product:SCLERAXIS homolog [Mus sp], full insert sequence Length = 2002 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccaccact 307 ||||||||| |||||||||||||| Sbjct: 637 accgccgccgccgccaccaccact 660
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cgaaccgccgcctccgccaccacc 304 |||||||||||| ||||||||||| Sbjct: 24113 cgaaccgccgccaccgccaccacc 24090
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cgaaccgccgcctccgccaccacc 304 |||||||||||| ||||||||||| Sbjct: 122160 cgaaccgccgccaccgccaccacc 122137
>gb|AC116664.1| Papio hamadryas, clone RP41-57E23, complete sequence Length = 175388 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 140833 ccgccgcctccgccaccacc 140852
>emb|CR723167.2|CNS0GKXX Tetraodon nigroviridis full-length cDNA Length = 1107 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cgccgcctccgccaccacca 305 |||||||||||||||||||| Sbjct: 160 cgccgcctccgccaccacca 141
>emb|CR722115.2|CNS0GK4P Tetraodon nigroviridis full-length cDNA Length = 1151 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cgccgcctccgccaccacca 305 |||||||||||||||||||| Sbjct: 175 cgccgcctccgccaccacca 156
>emb|CR720716.2|CNS0GJ1U Tetraodon nigroviridis full-length cDNA Length = 986 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cgccgcctccgccaccacca 305 |||||||||||||||||||| Sbjct: 250 cgccgcctccgccaccacca 231
>emb|CR719445.2|CNS0GI2J Tetraodon nigroviridis full-length cDNA Length = 1152 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cgccgcctccgccaccacca 305 |||||||||||||||||||| Sbjct: 175 cgccgcctccgccaccacca 156
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 296 gccaccaccactctcgccgccgccagcc 323 |||||| |||| |||||||||||||||| Sbjct: 6372824 gccaccgccaccctcgccgccgccagcc 6372797 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 gacgatatgaattttttagt 479 |||||||||||||||||||| Sbjct: 10344635 gacgatatgaattttttagt 10344616
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 gcctccgccaccaccactctcgccgccgccag 321 |||||| ||||||||||| |||||||||||| Sbjct: 574025 gcctcctccaccaccactgccgccgccgccag 573994
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 289 cgcctccgccaccaccactctcgccgccgcca 320 |||| ||||||||||||| |||||||||||| Sbjct: 7819802 cgccgccgccaccaccacattcgccgccgcca 7819833
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 gccaccaccactctcgccgccgcc 319 ||||||||||| |||||||||||| Sbjct: 26616341 gccaccaccaccctcgccgccgcc 26616318 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 35468967 ccgccgcctccgccaccacc 35468948
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 gaaccgccgcctccgccaccacca 305 ||||||||||| |||||||||||| Sbjct: 12418629 gaaccgccgccgccgccaccacca 12418652
>emb|CR648803.2|CNS0EZL5 Tetraodon nigroviridis full-length cDNA Length = 1101 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cgccgcctccgccaccacca 305 |||||||||||||||||||| Sbjct: 127 cgccgcctccgccaccacca 108
>emb|CR352294.7| Zebrafish DNA sequence from clone CH211-188C24 in linkage group 23, complete sequence Length = 146924 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 aaccgccgcctccgccaccaccac 306 |||||||||| ||||||||||||| Sbjct: 86592 aaccgccgccgccgccaccaccac 86615
>dbj|AB221642.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis, dev_stage=adult, strain=C57BL/6J), clone:V01Y038I13 Length = 624 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccaccact 307 ||||||||| |||||||||||||| Sbjct: 489 accgccgccgccgccaccaccact 512
>ref|XM_703023.1| PREDICTED: Danio rerio similar to type II cytokeratin, transcript variant 7 (LOC560694), mRNA Length = 2413 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 aaccgccgcctccgccaccaccac 306 |||||||||| ||||||||||||| Sbjct: 280 aaccgccgccgccgccaccaccac 257
>ref|XM_703019.1| PREDICTED: Danio rerio similar to type II cytokeratin, transcript variant 3 (LOC560694), mRNA Length = 1224 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 aaccgccgcctccgccaccaccac 306 |||||||||| ||||||||||||| Sbjct: 272 aaccgccgccgccgccaccaccac 249
>ref|XM_703018.1| PREDICTED: Danio rerio similar to type II cytokeratin, transcript variant 2 (LOC560694), mRNA Length = 2398 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 aaccgccgcctccgccaccaccac 306 |||||||||| ||||||||||||| Sbjct: 280 aaccgccgccgccgccaccaccac 257
>emb|AL357312.8| Human DNA sequence from clone RP11-390F10 on chromosome Xq21.2-22.1 Contains a eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) pseudogene and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 187469 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 tccttatccttatcctactagcag 72 ||||||||||||||||| |||||| Sbjct: 88225 tccttatccttatcctaatagcag 88202
>dbj|AB096103.1| Drosophila melanogaster dNAT1 mRNA for hypothetical protein, partial cds Length = 5155 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 735 ccgccgcctccgccaccacc 716
>ref|NM_198885.2| Mus musculus scleraxis (Scx), mRNA gb|S78079.1| scleraxis=basic helix-loop-helix transcription factor [mice, embryos, mRNA, 1140 nt] Length = 1140 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccaccact 307 ||||||||| |||||||||||||| Sbjct: 653 accgccgccgccgccaccaccact 676
>gb|AY791415.1| Labeo sorex voucher AMNH233629 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1011 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 tccttatccttatcctactagcag 72 ||||||||||||||| |||||||| Sbjct: 971 tccttatccttatcccactagcag 994
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 6514029 ccgccgcctccgccaccacc 6514010
>emb|BX007765.1|CNS08E5L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA12DF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 335 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 accgccgcctccgccaccaccact 307 |||||||||||||||| ||||||| Sbjct: 298 accgccgcctccgccagcaccact 275
>ref|NM_203499.1| Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (DDX42), transcript variant 2, mRNA Length = 3943 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactctcgccgccgcca 320 |||||||| ||||||||||||| ||||||||||| Sbjct: 51 ccgccgccgccgccaccaccaccaccgccgccgcca 16
>ref|NM_007372.2| Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (DDX42), transcript variant 1, mRNA Length = 4014 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactctcgccgccgcca 320 |||||||| ||||||||||||| ||||||||||| Sbjct: 51 ccgccgccgccgccaccaccaccaccgccgccgcca 16
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24, complete sequence Length = 121056 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 gccaccaccactctcgccgccgcc 319 ||||||||||| |||||||||||| Sbjct: 55899 gccaccaccaccctcgccgccgcc 55876
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 93770 ccgccgcctccgccaccacc 93751
>emb|AL137449.1|HSM802160 Homo sapiens mRNA; cDNA DKFZp434G0128 (from clone DKFZp434G0128); partial cds Length = 1989 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 205 ccgccgcctccgccaccacc 224
>gb|AC167721.1| Mus musculus BAC clone RP23-373F11 from chromosome 9, complete sequence Length = 170132 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 atggcaggattcctctcctg 31 |||||||||||||||||||| Sbjct: 154055 atggcaggattcctctcctg 154074
>gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, region 49E-49F, BAC clone BACR30D19, complete sequence Length = 163052 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 33694 ccgccgcctccgccaccacc 33675
>gb|AC007724.4|AC007724 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone BACR30N15, complete sequence Length = 178199 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 71835 ccgccgcctccgccaccacc 71816
>gb|AC009789.21|AC009789 Homo sapiens chromosome 17, clone RP11-361K8, complete sequence Length = 168215 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 115269 ccgccgcctccgccaccacc 115288
>gb|AF307160.1|AF307160 Homo sapiens HOXB4 gene, complete cds Length = 3420 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 1696 ccgccgcctccgccaccacc 1715
>gb|AC015651.18|AC015651 Homo sapiens chromosome 17, clone RP11-55A13, complete sequence Length = 191583 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccaccactctcgccgccgcca 320 |||||||| ||||||||||||| ||||||||||| Sbjct: 99913 ccgccgccgccgccaccaccaccaccgccgccgcca 99948
>dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0094B20 Length = 146270 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 gcctccgccaccaccactctcgccgccgccag 321 |||||| ||||||||||| |||||||||||| Sbjct: 27035 gcctcctccaccaccactgccgccgccgccag 27004
>gb|BT003762.1| Drosophila melanogaster RE34257 full insert cDNA Length = 5631 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 746 ccgccgcctccgccaccacc 727
>gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP11-387A1, complete sequence Length = 175667 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccaccactctcgccgccgcca 320 |||||||| ||||||||||||| ||||||||||| Sbjct: 64247 ccgccgccgccgccaccaccaccaccgccgccgcca 64282
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 acaccaccggcgccagcaccggcg 146 |||||||||||||| ||||||||| Sbjct: 198669 acaccaccggcgccggcaccggcg 198646 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 caccaccggcgccagcaccg 143 |||||||||||||||||||| Sbjct: 5548814 caccaccggcgccagcaccg 5548833
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gccgcctccgccaccaccac 306 |||||||||||||||||||| Sbjct: 30346 gccgcctccgccaccaccac 30365
>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence Length = 154728 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactctcgccgccgccagccc 324 |||||||| ||||| || |||| | ||||||||||||||| Sbjct: 80789 ccgccgccgccgccgccgccacccccgccgccgccagccc 80750
>dbj|AK118291.1| Arabidopsis thaliana At3g03760 mRNA for unknown protein, complete cds, clone: RAFL19-58-F13 Length = 1058 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 cctccgccaccaccactctcgccg 314 |||||||| ||||||||||||||| Sbjct: 638 cctccgcctccaccactctcgccg 661
>dbj|AP006673.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT30L06, TM0369b, complete sequence Length = 39734 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ccaccaccactctcgccgccgcca 320 ||||||||||| |||||||||||| Sbjct: 364 ccaccaccactgtcgccgccgcca 341
>ref|XM_955327.1| Neurospora crassa OR74A hypothetical protein (NCU04794.1) partial mRNA Length = 1113 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccaccactc 308 |||||||| ||||||||||||||| Sbjct: 332 ccgccgccgccgccaccaccactc 355
>ref|XM_952691.1| Neurospora crassa OR74A hypothetical protein (NCU00313.1) partial mRNA Length = 1182 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 183 ccgccgcctccgccaccacc 202
>ref|NM_024015.4| Homo sapiens homeobox B4 (HOXB4), mRNA Length = 2042 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 282 ccgccgcctccgccaccacc 301
>gb|AC099736.10| Mus musculus chromosome 15, clone RP23-228F5, complete sequence Length = 186137 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 aaccgccgcctccgccaccaccac 306 |||||||||| ||||||||||||| Sbjct: 92295 aaccgccgccgccgccaccaccac 92272
>dbj|AK065868.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043F09, full insert sequence Length = 1448 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gccgcctccgccaccaccac 306 |||||||||||||||||||| Sbjct: 161 gccgcctccgccaccaccac 180
>ref|XM_883670.1| Candida albicans SC5314 hypothetical protein (CaJ7.0155) partial mRNA Length = 2319 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccaccact 307 ||||||||| |||||||||||||| Sbjct: 886 accgccgccaccgccaccaccact 909
>emb|BX119982.8| Zebrafish DNA sequence from clone CH211-214J4 in linkage group 23, complete sequence Length = 210702 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 aaccgccgcctccgccaccaccac 306 |||||||||| ||||||||||||| Sbjct: 67296 aaccgccgccgccgccaccaccac 67319
>emb|BX547929.3| Mouse DNA sequence from clone RP24-186K6 on chromosome X, complete sequence Length = 26235 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 accgccgcctccgccaccaccact 307 ||||||||||| |||||||||||| Sbjct: 19013 accgccgcctctgccaccaccact 19036
>emb|AJ326698.1|HSA326698 Homo sapiens genomic sequence surrounding NotI site, clone NL4-BI17C Length = 578 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactctcgccgccgccagccc 324 |||||||| ||||| || |||| | ||||||||||||||| Sbjct: 191 ccgccgccgccgccgccgccacccccgccgccgccagccc 152
>gb|AY107359.1| Zea mays PCO079544 mRNA sequence Length = 407 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 286 cgccgcctccgccaccaccactctcgcc 313 ||||||| ||||| |||||||||||||| Sbjct: 135 cgccgccgccgccgccaccactctcgcc 162
>gb|BC049204.1| Homo sapiens homeobox B4, mRNA (cDNA clone MGC:54130 IMAGE:5533346), complete cds Length = 2040 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgcctccgccaccacc 304 |||||||||||||||||||| Sbjct: 282 ccgccgcctccgccaccacc 301
>gb|AY103573.1| Zea mays PCO129562 mRNA sequence Length = 2250 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 cgccaccaccactctcgccgccgc 318 ||||||| |||||||||||||||| Sbjct: 199 cgccaccgccactctcgccgccgc 176
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 cgaaccgccgcctccgccaccacc 304 |||||||||||| ||||||||||| Sbjct: 2145851 cgaaccgccgccgccgccaccacc 2145874
>gb|AF090776.1|AF090776 Tropidophoxinellus hellenicus cytochrome b (cyt b) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1141 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 tccttatccttatcctactagcag 72 ||||||||||||||| |||||||| Sbjct: 1085 tccttatccttatcccactagcag 1108
>gb|AC116390.13| Mus musculus chromosome 15, clone RP23-78N1, complete sequence Length = 232133 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tgcagcactcccacttcccc 384 |||||||||||||||||||| Sbjct: 70673 tgcagcactcccacttcccc 70654
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cttggtctgagatcaccgct 220 |||||||||||||||||||| Sbjct: 2159786 cttggtctgagatcaccgct 2159767
>dbj|AB001835.1| Homo sapiens DNA for Brain-1, complete cds Length = 1679 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 285 ccgccgcctccgccaccaccactctcgccgccgccagccc 324 |||||||| ||||| || |||| | ||||||||||||||| Sbjct: 181 ccgccgccgccgccgccgccacccccgccgccgccagccc 142 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 89,317,644 Number of extensions: 4778557 Number of successful extensions: 110945 Number of sequences better than 10.0: 144 Number of HSP's gapped: 110945 Number of HSP's successfully gapped: 151 Length of query: 552 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 530 Effective length of database: 18,508,616,841 Effective search space: 9809566925730 Effective search space used: 9809566925730 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
