ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf68c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK068864:Os07g0247100 375 e-104
2Os06g0536800:Os06g0536800 35 0.099
3Os03g0775000:Os03g0775000 35 0.099
4AK069208:Os05g0439200 32 1.1
5AY043215:Os03g0706500 30 4.1
6AK107083:Os03g0706500 30 4.1
7AK110771:Os03g0340300 30 4.2
8AK106681:Os02g0616600 29 7.1
9AK073262:Os06g0665500 29 7.1
10AK103327:Os06g0196700 29 9.2
11AK099445:Os03g0643300 29 9.3

>AK068864:Os07g0247100 |
          Length = 357
 Score =  375 bits (962), Expect = e-104
 Identities = 200/307 (65%), Positives = 217/307 (70%), Gaps = 1/307 (0%)
 Frame = +1

Query: 136  WSCQTKGRLLHPGLFATGADVPGCGGTLPEPEQ-RVPXXXXXXXXXXXXXXXXXXXDPLF 312
            WS   K  L   G FAT AD P  GG+LPEPE+ R                     DPLF
Sbjct: 39   WSNCAKSGLPPRGPFATAADTP-LGGSLPEPEEERDTLLDGALRAARFRDEESRRPDPLF 97

Query: 313  IDPYAAVLLSLDVAHQASESLVSPLMPSADHYRLTTRYLDEKLQHLISRSDNFRQIVLLT 492
            IDPYAAVLLSLDVA +  + L   LMPSA+HYRL TRY+D+KLQH IS SD+ RQIVLLT
Sbjct: 98   IDPYAAVLLSLDVASEDKDLLALHLMPSAEHYRLVTRYIDDKLQHFISNSDDLRQIVLLT 157

Query: 493  DGMDTRPYRLSWPRMSIVYDVSPGRIFSTAAQQLRGAGAKISRNCVLFHTPLESPDLQEG 672
            DGMDTRPYRLSWPR+S+VYDVSP R+F TA+QQLRGAGAKISRNCV+ HT  ESPDLQ G
Sbjct: 158  DGMDTRPYRLSWPRLSVVYDVSPRRVFITASQQLRGAGAKISRNCVVLHTSSESPDLQAG 217

Query: 673  LCKNGFNGNRPSLWVLQGXXXXXXXXXXXXXXVISNLAMKGGIFIGEVPHFPDWTAAADM 852
            L KNGFNGNRPSLWVLQG              VI NLAMKG IFIGEVP F  W AA DM
Sbjct: 218  LNKNGFNGNRPSLWVLQGLPLFTFKSLEDLLLVIGNLAMKGSIFIGEVPRFTQWGAATDM 277

Query: 853  VPEQDRLENLFFTHGFRVGFVLYENVAKDLGLDLAPEKEQCGRILFVAEQLRFSDAQMES 1032
              EQDRLENLFFT GFRV FV YE VAKD+GL L    E  GR +F+AEQLRFSDAQMES
Sbjct: 278  ASEQDRLENLFFTQGFRVSFVHYEEVAKDVGLGLDSPPEIHGRAIFIAEQLRFSDAQMES 337

Query: 1033 FWTHFDR 1053
            F  HF+R
Sbjct: 338  FRMHFER 344



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>Os06g0536800:Os06g0536800 |
          Length = 1335

 Score = 35.4 bits (80), Expect = 0.099
 Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 12/58 (20%)
 Frame = -1

Query: 222 RERASAAGDVGAGGEEPRVQEPALRLAAP------------GGGESGGRWRRKTRMWP 85
           R R   AGDVG G  E +VQE A   A P              GE GG  R + R WP
Sbjct: 279 RGRQWGAGDVGEGEGERKVQESAPAAAVPLCILHAATDAGVASGEGGGSRRGERRWWP 336



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>Os03g0775000:Os03g0775000 |
          Length = 702

 Score = 35.4 bits (80), Expect = 0.099
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
 Frame = +1

Query: 418 TRYLDEKLQHLISRSDNFRQIVLLTDGMDTRPYRLSWPRMSIVYDVSPGRIFSTAAQQLR 597
           T + D +++  ++      Q+VLL  GMD R YRLS  +   V+++    +       L 
Sbjct: 108 TLWFDARVEAAVASLGGAAQVVLLGAGMDARAYRLSCLKECTVFELDFPELLEMKTDLLH 167

Query: 598 GA--GAKISRNCVLFHTPLESP-DLQEG-----LCKNGFNGNRPSLWVLQG 726
            A   A   +  ++  +    P D+++G     L   G+   R ++WVL+G
Sbjct: 168 EAMSSANNQKLTMMAKSLTRVPADIRDGDWITKLQSYGYVPERNTIWVLEG 218



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>AK069208:Os05g0439200 |
          Length = 193

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 8/37 (21%)
 Frame = -1

Query: 183 GEEPRVQEPALRLAAP--------GGGESGGRWRRKT 97
           GE  R ++ A R A P        GGGE+ GRWRR+T
Sbjct: 35  GERRRRRQTARRAAPPLPPFASGAGGGEAWGRWRRRT 71



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>AY043215:Os03g0706500 |
          Length = 388

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 25/85 (29%), Positives = 32/85 (37%)
 Frame = -3

Query: 1126 KPQRHPIQYGTKVPRILLHQHPPLSYQNASRSSPSVHLKTAAVLQQKEFYHIVPFQELDL 947
            KP  H   + T       H HPP S    S  SP+     A +       H  PF +L+L
Sbjct: 27   KPDHHHHHHSTF---FYYHHHPPPSPSFPSFPSPAA----ATIASPSPAMH--PFMDLEL 77

Query: 946  SPDPLQHFHREQSQPGNRG*RKGFP 872
             P   Q    E+   G +G   G P
Sbjct: 78   EPHGQQLAAAEEDGAGGQGVDAGVP 102



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>AK107083:Os03g0706500 |
          Length = 388

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 25/85 (29%), Positives = 32/85 (37%)
 Frame = -3

Query: 1126 KPQRHPIQYGTKVPRILLHQHPPLSYQNASRSSPSVHLKTAAVLQQKEFYHIVPFQELDL 947
            KP  H   + T       H HPP S    S  SP+     A +       H  PF +L+L
Sbjct: 27   KPDHHHHHHSTF---FYYHHHPPPSPSFPSFPSPAA----ATIASPSPAMH--PFMDLEL 77

Query: 946  SPDPLQHFHREQSQPGNRG*RKGFP 872
             P   Q    E+   G +G   G P
Sbjct: 78   EPHGQQLAAAEEDGAGGQGVDAGVP 102



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>AK110771:Os03g0340300 |
          Length = 188

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = -1

Query: 222 RERASAAGDVGAGGEEPRVQEPALRLAAPGGGESGGRWRRK 100
           R R  AAGDV    +   VQ P  RLAA G G  G    R+
Sbjct: 81  RRRRLAAGDVHEHRQRRDVQLPERRLAAAGAGAGGDGGHRQ 121



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>AK106681:Os02g0616600 |
          Length = 107

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -3

Query: 1069 QHPPLSYQNASRSSPSVHLKTAAVLQQKEFYHIVPFQELDLSPDPLQHFHREQSQP 902
            +H P+S   AS++ PS H        +     ++PF     SP P  + HR  S P
Sbjct: 6    RHHPISLTGASQAKPSRH--------RVRLDEVIPFFLFPPSPPPHSNHHRHLSLP 53



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>AK073262:Os06g0665500 |
          Length = 491

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 11/51 (21%), Positives = 23/51 (45%)
 Frame = -2

Query: 596 LSCWAAVLKILPGDTSYTIDILGQLSLYGRVSIPSVNKTICLKLSDLLIKC 444
           L  W +   ++PG  ++T+DI           + S ++ +  +  D L+ C
Sbjct: 328 LLTWPSASNVIPGQVNFTVDIRAMDDKVRETIVTSFSRLVLQRCDDRLVDC 378



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>AK103327:Os06g0196700 |
          Length = 793

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 18/72 (25%), Positives = 35/72 (48%)
 Frame = -3

Query: 1108 IQYGTKVPRILLHQHPPLSYQNASRSSPSVHLKTAAVLQQKEFYHIVPFQELDLSPDPLQ 929
            +Q G+KV   ++ QH    +Q + +       +++ VLQQ +   ++    + L     +
Sbjct: 214  LQVGSKVDHPVMSQHQQQPHQLSQQQQVQPSQQSSVVLQQHQ-AQLLQQNAIHLQQQQ-E 271

Query: 928  HFHREQSQPGNR 893
            H  R+QSQP  +
Sbjct: 272  HLQRQQSQPAQQ 283



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>AK099445:Os03g0643300 |
          Length = 473

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
 Frame = +1

Query: 859  EQDRLENLFFTHGFRVGFVLYENVAKDLGLDLAPE------KEQCGR--ILFVAEQLR 1008
            + D LE +F  HG R+   L+E +  + G+ + P+      ++ C R  IL +A++++
Sbjct: 210  DTDGLEKIFKDHGERICGFLFEPIQGEAGVIIPPDGYLKAVRDLCSRHNILMIADEIQ 267


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 37,633,455
Number of extensions: 826141
Number of successful extensions: 3055
Number of sequences better than 10.0: 11
Number of HSP's gapped: 3045
Number of HSP's successfully gapped: 11
Length of query: 469
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 365
Effective length of database: 11,235,591
Effective search space: 4100990715
Effective search space used: 4100990715
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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