ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf68c17 |
|---|---|
| Clone Library Name | barley_pub |
>P64748:Y917_MYCBO Uncharacterized protein Mb0917c - Mycobacterium bovis| Length = 325 Score = 61.6 bits (148), Expect = 8e-09 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 16/158 (10%) Frame = +1 Query: 301 DPLFIDPYAAVLLSLDVAHQASESLVSPLMPSADHYRLT--------------TRYLDEK 438 DPL IDPYA V A ++ +P DHY T TRY DE Sbjct: 33 DPLAIDPYAEVFCRAAGGEWAD--VLDGKLP--DHYLTTGDFGEHFVNFQGARTRYFDEY 88 Query: 439 LQHLISRSDNFRQIVLLTDGMDTRPYRLSWPRMSIVYDVSPGRI--FSTAAQQLRGAGAK 612 + + +Q+V+L G+D+R +RL WP + ++++ ++ F A + Sbjct: 89 FSR--ATAAGMKQVVILAAGLDSRAFRLQWPIGTTIFELDRPQVLDFKNAVLADYHIRPR 146 Query: 613 ISRNCVLFHTPLESPDLQEGLCKNGFNGNRPSLWVLQG 726 R V + Q LC NGF+ NRPS W+ +G Sbjct: 147 AQRRSVAVDL---RDEWQIALCNNGFDANRPSAWIAEG 181
>P64747:Y893_MYCTU Uncharacterized protein Rv0893c/MT0917 - Mycobacterium tuberculosis| Length = 325 Score = 61.6 bits (148), Expect = 8e-09 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 16/158 (10%) Frame = +1 Query: 301 DPLFIDPYAAVLLSLDVAHQASESLVSPLMPSADHYRLT--------------TRYLDEK 438 DPL IDPYA V A ++ +P DHY T TRY DE Sbjct: 33 DPLAIDPYAEVFCRAAGGEWAD--VLDGKLP--DHYLTTGDFGEHFVNFQGARTRYFDEY 88 Query: 439 LQHLISRSDNFRQIVLLTDGMDTRPYRLSWPRMSIVYDVSPGRI--FSTAAQQLRGAGAK 612 + + +Q+V+L G+D+R +RL WP + ++++ ++ F A + Sbjct: 89 FSR--ATAAGMKQVVILAAGLDSRAFRLQWPIGTTIFELDRPQVLDFKNAVLADYHIRPR 146 Query: 613 ISRNCVLFHTPLESPDLQEGLCKNGFNGNRPSLWVLQG 726 R V + Q LC NGF+ NRPS W+ +G Sbjct: 147 AQRRSVAVDL---RDEWQIALCNNGFDANRPSAWIAEG 181
>P59986:Y3432_MYCBO Uncharacterized protein Mb3432 - Mycobacterium bovis| Length = 348 Score = 45.1 bits (105), Expect = 7e-04 Identities = 28/109 (25%), Positives = 51/109 (46%) Frame = +1 Query: 400 DHYRLTTRYLDEKLQHLISRSDNFRQIVLLTDGMDTRPYRLSWPRMSIVYDVSPGRIFST 579 D+ + T++ D+ + + RQ+V+L G+DTR YRL WP ++VY++ + Sbjct: 121 DNIAIRTKFYDDFFGD--ATTAGIRQVVILAAGLDTRAYRLPWPPGTVVYEIDQPAVIKF 178 Query: 580 AAQQLRGAGAKISRNCVLFHTPLESPDLQEGLCKNGFNGNRPSLWVLQG 726 + L A+ + L + D L GF+ RP+ + +G Sbjct: 179 KTRALANLNAEPNAERHAVAVDLRN-DWPTALKNAGFDPARPTAFSAEG 226
>Q50726:Y3399_MYCTU Uncharacterized protein Rv3399/MT3507 - Mycobacterium tuberculosis| Length = 348 Score = 45.1 bits (105), Expect = 7e-04 Identities = 28/109 (25%), Positives = 51/109 (46%) Frame = +1 Query: 400 DHYRLTTRYLDEKLQHLISRSDNFRQIVLLTDGMDTRPYRLSWPRMSIVYDVSPGRIFST 579 D+ + T++ D+ + + RQ+V+L G+DTR YRL WP ++VY++ + Sbjct: 121 DNIAIRTKFYDDFFGD--ATTAGIRQVVILAAGLDTRAYRLPWPPGTVVYEIDQPAVIKF 178 Query: 580 AAQQLRGAGAKISRNCVLFHTPLESPDLQEGLCKNGFNGNRPSLWVLQG 726 + L A+ + L + D L GF+ RP+ + +G Sbjct: 179 KTRALANLNAEPNAERHAVAVDLRN-DWPTALKNAGFDPARPTAFSAEG 226
>Q5RB22:ERBB3_PONPY Receptor tyrosine-protein kinase erbB-3 precursor - Pongo pygmaeus| (Orangutan) Length = 1342 Score = 33.9 bits (76), Expect = 1.7 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 7/106 (6%) Frame = +2 Query: 809 ERCHIFQTGRQQ------QTWSPNKTGWKTFS-LPTVSGLALFSMKMLQRIWA*I*LLKR 967 E+ ++FQT R+ Q+W P+ + FS L T+ G +L++ I +K Sbjct: 382 EKLNVFQTVREITGYLNIQSWPPHMHNFSVFSNLTTIGGRSLYNRGFSLLI------MKN 435 Query: 968 NNVVEFFLLQNSCGFQMHRWRASGRILIGQRRMLMKKDSRNFSSIL 1105 NV S GF+ + ++GRI I R L S N++ +L Sbjct: 436 LNVT-------SLGFRSLKEISAGRIYISANRQLCYHHSLNWTKVL 474
>P47107:YJ09_YEAST Uncharacterized protein YJR039W - Saccharomyces cerevisiae (Baker's| yeast) Length = 1121 Score = 32.3 bits (72), Expect = 4.9 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Frame = -2 Query: 632 RTQFRDIFAPAPLSCWAAVLKILPGDTSYTIDILGQLSLYGRVSIP--SVNKTICLKLSD 459 R + ++++AP P+SC ++PG+ ++ ++ + V +P + T+C K Sbjct: 664 RFKIQEVYAPCPISC------LIPGEKDGSVVMVTSQGQFYDVLVPGDAGRATLCSKFEK 717 Query: 458 LLIKCCSF-----SSRY 423 +L C F SSRY Sbjct: 718 VLKTCLKFITLESSSRY 734
>P21860:ERBB3_HUMAN Receptor tyrosine-protein kinase erbB-3 precursor - Homo sapiens| (Human) Length = 1342 Score = 32.3 bits (72), Expect = 4.9 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 7/106 (6%) Frame = +2 Query: 809 ERCHIFQTGRQQ------QTWSPNKTGWKTFS-LPTVSGLALFSMKMLQRIWA*I*LLKR 967 E+ ++F+T R+ Q+W P+ + FS L T+ G +L++ I +K Sbjct: 382 EKLNVFRTVREITGYLNIQSWPPHMHNFSVFSNLTTIGGRSLYNRGFSLLI------MKN 435 Query: 968 NNVVEFFLLQNSCGFQMHRWRASGRILIGQRRMLMKKDSRNFSSIL 1105 NV S GF+ + ++GRI I R L S N++ +L Sbjct: 436 LNVT-------SLGFRSLKEISAGRIYISANRQLCYHHSLNWTKVL 474
>Q5IGR6:EXT1C_DANRE Exostosin-1c - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 737 Score = 32.0 bits (71), Expect = 6.4 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +1 Query: 436 KLQHLISRSDNFRQIVLLTDGMDTRPYRLSWPRMSIVYDVSPGR 567 KL ++S+S QI++L + + P R WP M + V+ GR Sbjct: 491 KLLQVVSKSKYCSQIIILWNSEKSPPQRSKWPPMPVPLTVTDGR 534 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 230,217,587 Number of extensions: 4780580 Number of successful extensions: 13336 Number of sequences better than 10.0: 8 Number of HSP's gapped: 13297 Number of HSP's successfully gapped: 8 Length of query: 469 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 352 Effective length of database: 68,593,924 Effective search space: 24145061248 Effective search space used: 24145061248 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
