ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf71f09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK105521:Os09g0359900 | 452 | e-127 | 2 | AK099916:Os04g0492400 | 189 | 4e-48 | 3 | AK072530:Os04g0492400 | 189 | 4e-48 | 4 | Os09g0514300:Os09g0514300 | 180 | 2e-45 | 5 | AK062761:Os04g0645500 | 37 | 0.034 | 6 | AK111058:Os06g0101100 | 35 | 0.075 | 7 | Os02g0818700:Os02g0818700 | 35 | 0.13 | 8 | Os09g0242700:Os09g0242700 | 31 | 1.9 | 9 | Os11g0155500:Os11g0155500 | 30 | 2.4 | 10 | AK111480:Os05g0564100 | 30 | 4.1 | 11 | AK102939:Os04g0662800 | 29 | 5.4 | 12 | AK073993:Os03g0618900 | 29 | 5.4 | 13 | AK067853:Os03g0748700 | 29 | 7.0 | 14 | AK101493:Os03g0843600 | 28 | 9.2 | 15 | AK068216:Os03g0843600 | 28 | 9.2 |
|---|
>AK105521:Os09g0359900 | Length = 312 Score = 452 bits (1162), Expect = e-127 Identities = 222/263 (84%), Positives = 237/263 (90%) Frame = +1 Query: 127 VEVLLSEESPIAAGNLEPVVVDDSLSIYKGRVNTSDVFGVKNSDLVPGKYEGGLKLWEGS 306 VEVLLSEESP+AAG LEPVV+DDSLSIYKGR +TSDVFGVKNSDLVPGKYEGGLKLWEGS Sbjct: 50 VEVLLSEESPVAAGELEPVVIDDSLSIYKGRASTSDVFGVKNSDLVPGKYEGGLKLWEGS 109 Query: 307 LDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNAEVLRCLTI 486 LDLVKTLNSDIK+DRLL+EGK +LELGCGHGLPGIYA LKGA LVHFQDFNAEVLRCLTI Sbjct: 110 LDLVKTLNSDIKEDRLLLEGKRVLELGCGHGLPGIYAILKGAVLVHFQDFNAEVLRCLTI 169 Query: 487 PNVKANLFKESSQGTFTSRSVGFYAGDWGEIDKLLLRGDAVQDKTTNLQTENEGYRGYDI 666 PNVKANL KESS+ FTS SVGF+AGDW EID LLLRGDA DK+TN + Y GYDI Sbjct: 170 PNVKANLLKESSEEKFTSGSVGFFAGDWSEIDSLLLRGDADLDKSTNSHENDTAYNGYDI 229 Query: 667 ILMAETVYALDSLPSLYRLIKKCLHYPSGVVYMAGKKHYFGVGGGTRQFLRLVTEDGALQ 846 ILMAETVYA+ SLP+LYRLIKKCL YP G+VYMAGKKHYFGVGGGTR F+RLVTEDGA+Q Sbjct: 230 ILMAETVYAVSSLPNLYRLIKKCLRYPGGIVYMAGKKHYFGVGGGTRHFVRLVTEDGAMQ 289 Query: 847 SDLLAEVTDGSSNVREVWKFSFK 915 SDLLAEV DGSSNVREVWK SFK Sbjct: 290 SDLLAEVADGSSNVREVWKLSFK 312
>AK099916:Os04g0492400 | Length = 346 Score = 189 bits (479), Expect = 4e-48 Identities = 113/291 (38%), Positives = 152/291 (52%), Gaps = 52/291 (17%) Frame = +1 Query: 199 LSIYKGRVNTSDVFGVKNSDLVPGKYEGGLKLWEGSLDLVKTLNSDIKDDRLLIEGKHIL 378 L I+KG+V+ +D+ S++V KY+G LK WE S+ LV + ++I+D +L GK +L Sbjct: 61 LDIFKGKVSVADMIAFSPSEVVASKYDGSLKYWESSITLVNIIKNEIRDGQLSFRGKRVL 120 Query: 379 ELGCGHGLPGIYAALKGAGLVHFQDFNAEVLRCLTIPNVKANLFKESSQGTFTSRS---- 546 ELGCG GL GI+A LKGA VHFQD NAE +RC IPNV ANL + + S S Sbjct: 121 ELGCGSGLAGIFACLKGASTVHFQDTNAETIRCRAIPNVLANLEQARDRQNRPSESPVTP 180 Query: 547 --------VGFYAGDWGEIDKLL-------------------LRGDAVQDKTTNLQTEN- 642 V FYAGDW E+ +L + G + D ++ + +N Sbjct: 181 SRQLLAPNVHFYAGDWEELPTILSVVHPPAAPTNLSFSEDDFMDGCSSHDGSSIVGVDNC 240 Query: 643 -------EGYR-------------GYDIILMAETVYALDSLPSLYRLIKKCLHYPSGVVY 762 G R GYD+IL++E YA++SL LY LI KCL P GV+Y Sbjct: 241 PRRSRKLSGSRAWERASETDQADGGYDVILISEVPYAVNSLKKLYALITKCLRPPYGVLY 300 Query: 763 MAGKKHYFGVGGGTRQFLRLVTEDGALQSDLLAEVTDGSSNVREVWKFSFK 915 + KK+ G GG RQ L+ E+G L L E+ D RE+WKF FK Sbjct: 301 VVSKKNLVGSNGGARQLRALMEEEGVLGGHFLTELAD-----REIWKFFFK 346
>AK072530:Os04g0492400 | Length = 346 Score = 189 bits (479), Expect = 4e-48 Identities = 113/291 (38%), Positives = 152/291 (52%), Gaps = 52/291 (17%) Frame = +1 Query: 199 LSIYKGRVNTSDVFGVKNSDLVPGKYEGGLKLWEGSLDLVKTLNSDIKDDRLLIEGKHIL 378 L I+KG+V+ +D+ S++V KY+G LK WE S+ LV + ++I+D +L GK +L Sbjct: 61 LDIFKGKVSVADMIAFSPSEVVASKYDGSLKYWESSITLVNIIKNEIRDGQLSFRGKRVL 120 Query: 379 ELGCGHGLPGIYAALKGAGLVHFQDFNAEVLRCLTIPNVKANLFKESSQGTFTSRS---- 546 ELGCG GL GI+A LKGA VHFQD NAE +RC IPNV ANL + + S S Sbjct: 121 ELGCGSGLAGIFACLKGASTVHFQDTNAETIRCRAIPNVLANLEQARDRQNRPSESPVTP 180 Query: 547 --------VGFYAGDWGEIDKLL-------------------LRGDAVQDKTTNLQTEN- 642 V FYAGDW E+ +L + G + D ++ + +N Sbjct: 181 SRQLLAPNVHFYAGDWEELPTILSVVHPPAAPTNLSFSEDDFMDGCSSHDGSSIVGVDNC 240 Query: 643 -------EGYR-------------GYDIILMAETVYALDSLPSLYRLIKKCLHYPSGVVY 762 G R GYD+IL++E YA++SL LY LI KCL P GV+Y Sbjct: 241 PRRSRKLSGSRAWERASETDQADGGYDVILISEVPYAVNSLKKLYALITKCLRPPYGVLY 300 Query: 763 MAGKKHYFGVGGGTRQFLRLVTEDGALQSDLLAEVTDGSSNVREVWKFSFK 915 + KK+ G GG RQ L+ E+G L L E+ D RE+WKF FK Sbjct: 301 VVSKKNLVGSNGGARQLRALMEEEGVLGGHFLTELAD-----REIWKFFFK 346
>Os09g0514300:Os09g0514300 | Length = 632 Score = 180 bits (456), Expect = 2e-45 Identities = 112/296 (37%), Positives = 156/296 (52%), Gaps = 57/296 (19%) Frame = +1 Query: 199 LSIYKGRVNTSDVFGVKNSDLVPGKYEGGLKLWEGSLDLVKTLNSDIKDDRLLIEGKHIL 378 ++I+KG+V+ D+ G+ S+++ K EG LK E S+DLV L ++I+D L K +L Sbjct: 344 MNIFKGKVSVVDIVGLSGSEVITPKGEGPLKCCESSIDLVNVLKNEIRDGLLTFRSKQVL 403 Query: 379 ELGCGHGLPGIYAALKGAGLVHFQDFNAEVLRCLTIPNVKANLFKE-----SSQGTFTSR 543 ELGCG+GLPGI+A LKGA VHFQD +AE++RC TIPNV ANL QG+ + Sbjct: 404 ELGCGYGLPGIFACLKGASTVHFQDPSAEIIRCKTIPNVLANLEHAQDKHGQQQGSPLTP 463 Query: 544 S-------VGFYAGDWGEIDKLL-----------------------LRGDAVQDKTT--- 624 S + FYAG+W E+ +L L G + QD + Sbjct: 464 SRQQLPQDIHFYAGEWEELHTVLSVIQEDEVDTSSGVALEFCEDDFLDGCSSQDASNICH 523 Query: 625 -------------------NLQTENEGYRGYDIILMAETVYALDSLPSLYRLIKKCLHYP 747 N T +G GYDI+L+ E Y+ SL +LY L+KKCL P Sbjct: 524 ETSSRRSRKLSGSRAWERGNETTTGDG--GYDILLVNEIPYSASSLQNLYLLVKKCLRPP 581 Query: 748 SGVVYMAGKKHYFGVGGGTRQFLRLVTEDGALQSDLLAEVTDGSSNVREVWKFSFK 915 GV+Y+A +K+Y G RQ LV E+GA + L++E + RE+WKF FK Sbjct: 582 YGVMYLAARKNYIGSSSAVRQLRSLVDEEGAFGAHLVSEPPE-----REIWKFFFK 632
>AK062761:Os04g0645500 | Length = 248 Score = 36.6 bits (83), Expect = 0.034 Identities = 41/154 (26%), Positives = 60/154 (38%), Gaps = 1/154 (0%) Frame = +1 Query: 256 DLVPGKYEGGLKLWEGSLDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYA-ALKGA 432 D G+ G LW+ SL L L S + L G +LELG G GLPGI A A GA Sbjct: 35 DPATGRALTGSWLWDSSLVLASHLASCVHHHHL--RGATVLELGAGTGLPGIAAVACLGA 92 Query: 433 GLVHFQDFNAEVLRCLTIPNVKANLFKESSQGTFTSRSVGFYAGDWGEIDKLLLRGDAVQ 612 D +P ++AN + T+ WG Sbjct: 93 ARCVLTDVRP------LLPGLRAN----ADANGLTAEQADVRELRWG------------- 129 Query: 613 DKTTNLQTENEGYRGYDIILMAETVYALDSLPSL 714 +L+ E + D++LM++ Y D +P++ Sbjct: 130 ---GHLEPEVQ----VDVVLMSDVFYDPDDMPAM 156
>AK111058:Os06g0101100 | Length = 271 Score = 35.4 bits (80), Expect = 0.075 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +1 Query: 283 GLKLWEGSLDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGA 432 G +W+ + L K L + L + LELG G GL G AAL GA Sbjct: 81 GAVVWDSGVVLAKFLEHAVDSGLLTLRAARALELGAGCGLAGCVAALLGA 130
>Os02g0818700:Os02g0818700 | Length = 283 Score = 34.7 bits (78), Expect = 0.13 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Frame = +1 Query: 358 IEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNAEVLRCLTIPNVKAN--LFKESSQGT 531 ++GK ++ELG G GL G+ AL G +V EVL L + NV+ N +S+ + Sbjct: 21 LKGKRVIELGAGCGLAGLGMALLGCDVVTTD--QVEVLP-LLLRNVERNKSWISQSNSDS 77 Query: 532 FTSRSVGFYAGDWGEIDKL 588 + SV DWG D + Sbjct: 78 GSIGSVTVAELDWGNKDHI 96
>Os09g0242700:Os09g0242700 | Length = 116 Score = 30.8 bits (68), Expect = 1.9 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +3 Query: 786 WCRWWHKAISTLGYRRWCPAV 848 W RW A G RRWCPAV Sbjct: 8 WRRWSEVADDARGLRRWCPAV 28
>Os11g0155500:Os11g0155500 | Length = 610 Score = 30.4 bits (67), Expect = 2.4 Identities = 15/53 (28%), Positives = 28/53 (52%) Frame = +2 Query: 695 WIHFLVSTGSSRSAYTTLVV*FIWQGKSITLV*VVAQGNFYAWLQKMVPCSRT 853 W+ ++ G+S T+L+V + Q + + ++ G AWL K+ PC+ T Sbjct: 358 WVSNVIGAGASLGILTSLMVAMLGQARYLCVI--GRSGVMPAWLAKVHPCTAT 408
>AK111480:Os05g0564100 | Length = 224 Score = 29.6 bits (65), Expect = 4.1 Identities = 37/170 (21%), Positives = 60/170 (35%), Gaps = 6/170 (3%) Frame = +1 Query: 274 YEGGLKLWEGSLDLVKTLNSDIKD------DRLLIEGKHILELGCGHGLPGIYAALKGAG 435 +E G +W SL LVK ++D D L G +ELG G G G+ + G Sbjct: 27 FEVGTSVWPSSLVLVKFAERCLRDPALPFADVLRFPGTRAVELGSGCGPAGLGLSRLGLA 86 Query: 436 LVHFQDFNAEVLRCLTIPNVKANLFKESSQGTFTSRSVGFYAGDWGEIDKLLLRGDAVQD 615 + D A +P ++ NL + R + + L Sbjct: 87 DLVLTDIAA------VLPALRRNLRRNRRHLPRAPRLAQLHWNCPAHLASL--------- 131 Query: 616 KTTNLQTENEGYRGYDIILMAETVYALDSLPSLYRLIKKCLHYPSGVVYM 765 R +D+++ A+ VY +S+P L + GVV + Sbjct: 132 ---------ASPRRFDLVVAADVVYVPESVPHLVAAMDVLADADRGVVLL 172
>AK102939:Os04g0662800 | Length = 549 Score = 29.3 bits (64), Expect = 5.4 Identities = 9/19 (47%), Positives = 15/19 (78%) Frame = +1 Query: 355 LIEGKHILELGCGHGLPGI 411 ++EG H++ +GCG+GL I Sbjct: 392 ILEGMHVISVGCGYGLSAI 410
>AK073993:Os03g0618900 | Length = 271 Score = 29.3 bits (64), Expect = 5.4 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = -2 Query: 328 LGFSPSPMILPTA-STHLHIFLEPNQSFL 245 LGF+P P++L T + LH FL P +S + Sbjct: 206 LGFAPEPLLLATDWLSRLHFFLNPRRSMI 234
>AK067853:Os03g0748700 | Length = 476 Score = 28.9 bits (63), Expect = 7.0 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = +1 Query: 298 EGSLDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNAEVLRC 477 EGS+D NSD ++ L +EGK +L+ +G + ++ + + EV+ C Sbjct: 334 EGSVDFRILRNSDFREVTLEVEGKPVLKFALCYGFRNLQNIIRKIKMGKCEYHFIEVMAC 393
>AK101493:Os03g0843600 | Length = 893 Score = 28.5 bits (62), Expect = 9.2 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 20/90 (22%) Frame = -2 Query: 322 FSPSPMILPTA--------------STHLHIFLEPNQSFLPRKHQRC*LFPCKSIGSRQP 185 F P+P LP++ S++ + F + PR R L P + +QP Sbjct: 18 FPPAPPFLPSSRARTPRAPFPSTSRSSNPYSFPDRRPPPTPRSRSRSPLPPPEQQKQQQP 77 Query: 184 PQ-----APSCR-PRWAIPRRGGPRQLAAE 113 P AP R PR+A RRG R L AE Sbjct: 78 PPTTPPPAPRRRDPRYAGVRRGDVRTLTAE 107
>AK068216:Os03g0843600 | Length = 893 Score = 28.5 bits (62), Expect = 9.2 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 20/90 (22%) Frame = -2 Query: 322 FSPSPMILPTA--------------STHLHIFLEPNQSFLPRKHQRC*LFPCKSIGSRQP 185 F P+P LP++ S++ + F + PR R L P + +QP Sbjct: 18 FPPAPPFLPSSRARTPRAPFPSTSRSSNPYSFPDRRPPPTPRSRSRSPLPPPEQQKQQQP 77 Query: 184 PQ-----APSCR-PRWAIPRRGGPRQLAAE 113 P AP R PR+A RRG R L AE Sbjct: 78 PPTTPPPAPRRRDPRYAGVRRGDVRTLTAE 107 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,195,131 Number of extensions: 677378 Number of successful extensions: 1864 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1858 Number of HSP's successfully gapped: 18 Length of query: 378 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 276 Effective length of database: 11,315,673 Effective search space: 3123125748 Effective search space used: 3123125748 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
