| Clone Name | FLbaf71f09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001069511.1| Oryza sativa (japonica cultivar-group) Os09g0359900 (Os09g0359900) mRNA, complete cds Length = 1369 Score = 444 bits (224), Expect = e-121 Identities = 455/532 (85%) Strand = Plus / Plus Query: 95 ccggccctccccctccgcctccgccgccagctgtcgaggtcctcctctccgaggaatcgc 154 |||| ||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 324 ccggacctcctccgccgccgccgccgccagccgtcgaggtgctcctctccgaggaatcgc 383 Query: 155 ccatcgcggccggcaacttggagcctgtggtggttgacgactccctatcgatttacaagg 214 || ||||||||||| | ||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 384 ccgtcgcggccggcgaattggagcctgtggtgattgatgactccctgtcgatttacaagg 443 Query: 215 gaagagttaacacctctgatgttttcggggtaaaaaactctgatttggttccaggaaaat 274 | |||| | || ||||||||||| || || |||||||||||||| || ||||| |||| Sbjct: 444 ggagagcaagtacttctgatgtttttggagtcaaaaactctgatttagtcccagggaaat 503 Query: 275 atgaaggtgggttgaagctgtgggaaggatcattggacttggtgaaaaccctaaattcag 334 ||||||||||||||||||| |||||||| ||| | ||||||||||| || |||| |||| Sbjct: 504 atgaaggtgggttgaagctctgggaaggttcactagacttggtgaagactttaaactcag 563 Query: 335 acatcaaagatgatcgactgcttatagaaggcaaacacatactagagttaggatgtggac 394 |||||||||| || ||| ||||| |||||||||||| || | ||| |||||||||||| Sbjct: 564 acatcaaagaagaccgattgcttttagaaggcaaacgtgtattggagctaggatgtggac 623 Query: 395 atggcctccctggtatctatgccgctctgaagggtgctggtctagttcactttcaggatt 454 |||||||||||||||||||||| ||| |||||||||| |||||| ||||| || |||| Sbjct: 624 atggcctccctggtatctatgctattcttaagggtgctgttctagtccacttccaagatt 683 Query: 455 tcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaagctaatctgttcaagg 514 ||||||||||||| ||||| ||||||||||| ||||||||||| |||||||| || |||| Sbjct: 684 tcaatgctgaggtccttagatgccttaccataccaaatgtaaaggctaatctattgaagg 743 Query: 515 aatcatctcaaggaacattcacatctaggagtgttggtttttatgctggtgattggggtg 574 |||||||| ||| || || |||||| | ||||||||||| | ||||||||| ||| | | Sbjct: 744 aatcatctgaagaaaagtttacatctggtagtgttggtttctttgctggtgactggagcg 803 Query: 575 aaatcgacaagttacttcttcgcggagatgctgtccaggataaaacaaccaa 626 |||| |||| | |||||||| |||||||||| || ||||||| ||||||| Sbjct: 804 aaattgacagtctgcttcttcgtggagatgctgacctggataaatcaaccaa 855 Score = 266 bits (134), Expect = 2e-67 Identities = 233/266 (87%) Strand = Plus / Plus Query: 658 tatgatatcatcctgatggctgagactgtttatgcattggattcacttcctagtctctac 717 |||||||||||||| |||||||||||||| |||||| | ||| || |||| ||||||| Sbjct: 887 tatgatatcatccttatggctgagactgtctatgcagtatcttccctccctaatctctac 946 Query: 718 aggctcatcaagaagtgcttacactaccctagtggtgtagtttatatggcagggaaaaag 777 |||||||||||||||||| | | ||||||| | ||| ||||||| ||||| || |||||| Sbjct: 947 aggctcatcaagaagtgcctgcgctaccctggaggtatagtttacatggcgggtaaaaag 1006 Query: 778 cattactttggtgtaggtggtggcacaaggcaatttctacgcttggttacagaagatggt 837 |||||||| || |||||||||||||||||||| ||| | |||||||||||||||||||| Sbjct: 1007 cattacttcggagtaggtggtggcacaaggcactttgttcgcttggttacagaagatggg 1066 Query: 838 gccctgcagtcggacctgcttgctgaagttactgatggatcatccaatgttagggaggtt 897 ||| ||||||| ||||| |||||||||||| ||||||||||||| |||||| |||||||| Sbjct: 1067 gccatgcagtccgacctacttgctgaagttgctgatggatcatcgaatgttcgggaggtt 1126 Query: 898 tggaaattctcattcaagtagactag 923 |||||||| || ||||| |||||||| Sbjct: 1127 tggaaattatcgttcaaatagactag 1152
>dbj|AK105521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F10, full insert sequence Length = 1368 Score = 444 bits (224), Expect = e-121 Identities = 455/532 (85%) Strand = Plus / Plus Query: 95 ccggccctccccctccgcctccgccgccagctgtcgaggtcctcctctccgaggaatcgc 154 |||| ||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 323 ccggacctcctccgccgccgccgccgccagccgtcgaggtgctcctctccgaggaatcgc 382 Query: 155 ccatcgcggccggcaacttggagcctgtggtggttgacgactccctatcgatttacaagg 214 || ||||||||||| | ||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 383 ccgtcgcggccggcgaattggagcctgtggtgattgatgactccctgtcgatttacaagg 442 Query: 215 gaagagttaacacctctgatgttttcggggtaaaaaactctgatttggttccaggaaaat 274 | |||| | || ||||||||||| || || |||||||||||||| || ||||| |||| Sbjct: 443 ggagagcaagtacttctgatgtttttggagtcaaaaactctgatttagtcccagggaaat 502 Query: 275 atgaaggtgggttgaagctgtgggaaggatcattggacttggtgaaaaccctaaattcag 334 ||||||||||||||||||| |||||||| ||| | ||||||||||| || |||| |||| Sbjct: 503 atgaaggtgggttgaagctctgggaaggttcactagacttggtgaagactttaaactcag 562 Query: 335 acatcaaagatgatcgactgcttatagaaggcaaacacatactagagttaggatgtggac 394 |||||||||| || ||| ||||| |||||||||||| || | ||| |||||||||||| Sbjct: 563 acatcaaagaagaccgattgcttttagaaggcaaacgtgtattggagctaggatgtggac 622 Query: 395 atggcctccctggtatctatgccgctctgaagggtgctggtctagttcactttcaggatt 454 |||||||||||||||||||||| ||| |||||||||| |||||| ||||| || |||| Sbjct: 623 atggcctccctggtatctatgctattcttaagggtgctgttctagtccacttccaagatt 682 Query: 455 tcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaagctaatctgttcaagg 514 ||||||||||||| ||||| ||||||||||| ||||||||||| |||||||| || |||| Sbjct: 683 tcaatgctgaggtccttagatgccttaccataccaaatgtaaaggctaatctattgaagg 742 Query: 515 aatcatctcaaggaacattcacatctaggagtgttggtttttatgctggtgattggggtg 574 |||||||| ||| || || |||||| | ||||||||||| | ||||||||| ||| | | Sbjct: 743 aatcatctgaagaaaagtttacatctggtagtgttggtttctttgctggtgactggagcg 802 Query: 575 aaatcgacaagttacttcttcgcggagatgctgtccaggataaaacaaccaa 626 |||| |||| | |||||||| |||||||||| || ||||||| ||||||| Sbjct: 803 aaattgacagtctgcttcttcgtggagatgctgacctggataaatcaaccaa 854 Score = 266 bits (134), Expect = 2e-67 Identities = 233/266 (87%) Strand = Plus / Plus Query: 658 tatgatatcatcctgatggctgagactgtttatgcattggattcacttcctagtctctac 717 |||||||||||||| |||||||||||||| |||||| | ||| || |||| ||||||| Sbjct: 886 tatgatatcatccttatggctgagactgtctatgcagtatcttccctccctaatctctac 945 Query: 718 aggctcatcaagaagtgcttacactaccctagtggtgtagtttatatggcagggaaaaag 777 |||||||||||||||||| | | ||||||| | ||| ||||||| ||||| || |||||| Sbjct: 946 aggctcatcaagaagtgcctgcgctaccctggaggtatagtttacatggcgggtaaaaag 1005 Query: 778 cattactttggtgtaggtggtggcacaaggcaatttctacgcttggttacagaagatggt 837 |||||||| || |||||||||||||||||||| ||| | |||||||||||||||||||| Sbjct: 1006 cattacttcggagtaggtggtggcacaaggcactttgttcgcttggttacagaagatggg 1065 Query: 838 gccctgcagtcggacctgcttgctgaagttactgatggatcatccaatgttagggaggtt 897 ||| ||||||| ||||| |||||||||||| ||||||||||||| |||||| |||||||| Sbjct: 1066 gccatgcagtccgacctacttgctgaagttgctgatggatcatcgaatgttcgggaggtt 1125 Query: 898 tggaaattctcattcaagtagactag 923 |||||||| || ||||| |||||||| Sbjct: 1126 tggaaattatcgttcaaatagactag 1151
>gb|AY108781.1| Zea mays PCO122043 mRNA sequence Length = 880 Score = 258 bits (130), Expect = 4e-65 Identities = 475/590 (80%) Strand = Plus / Plus Query: 172 ttggagcctgtggtggttgacgactccctatcgatttacaagggaagagttaacacctct 231 |||||||| || ||||| || |||||| | |||| |||||||| ||||| | || ||| Sbjct: 289 ttggagccagtcgtggtcgatgactccttgacgatctacaagggcagagtgagtacatct 348 Query: 232 gatgttttcggggtaaaaaactctgatttggttccaggaaaatatgaaggtgggttgaag 291 || || || || || ||| ||||||||||||| || |||||||||||||||||||||||| Sbjct: 349 gacgtgtttggtgtcaaagactctgatttggtccctggaaaatatgaaggtgggttgaag 408 Query: 292 ctgtgggaaggatcattggacttggtgaaaaccctaaattcagacatcaaagatgatcga 351 ||||||||||| ||||| |||||||||||| |||| ||||| || |||||||| ||| | Sbjct: 409 ctgtgggaaggttcattagacttggtgaaagccctgaattctgatatcaaagaagataaa 468 Query: 352 ctgcttatagaaggcaaacacatactagagttaggatgtggacatggcctccctggtatc 411 | | | | |||||||||| | || | ||| | ||||||||||||||||||||||| || Sbjct: 469 tttcatctggaaggcaaacgcgtattggagcttggatgtggacatggcctccctggcatt 528 Query: 412 tatgccgctctgaagggtgctggtctagttcactttcaggatttcaatgctgaggttctt 471 | ||| | ||| |||||||||| || |||| || || ||||||||||| ||||| ||| Sbjct: 529 tttgcgggtctcaagggtgctgacctgattcatttccaagatttcaatgccgaggtgctt 588 Query: 472 aggtgccttaccatcccaaatgtaaaagctaatctgttcaaggaatcatctcaaggaaca 531 |||||| | || || ||||||||||||| ||||| |||||||| ||| | |||||||| Sbjct: 589 aggtgcttgactataccaaatgtaaaagtcaatcttttcaaggattcaccagaaggaaca 648 Query: 532 ttcacatctaggagtgttggtttttatgctggtgattggggtgaaatcgacaagttactt 591 | |||| | || ||||||||| | ||||||||||||| ||||||| || ||| |||| Sbjct: 649 tgtacatgtccgattgttggtttctttgctggtgattggagtgaaatggataagctacta 708 Query: 592 cttcgcggagatgctgtccaggataaaacaaccaatcttcaaacagaaaatgaagggtat 651 ||| |||| ||||||| || || |||||| ||| | | | |||||| | || || | Sbjct: 709 ctttgcggggatgctgagcaagacaaaacagccagtggtgatacagaaggtaaaatgtgt 768 Query: 652 agaggttatgatatcatcctgatggctgagactgtttatgcattggattcacttcctagt 711 | ||||||||||||||||||||||||||||||||||| || | || ||||| | | Sbjct: 769 aatggttatgatatcatcctgatggctgagactgtttacgcggtatcttgtcttccaaat 828 Query: 712 ctctacaggctcatcaagaagtgcttacactaccctagtggtgtagttta 761 |||||||||||||||||||||||||| | ||||||| | ||||| ||||| Sbjct: 829 ctctacaggctcatcaagaagtgcttgcgctaccctgggggtgtggttta 878
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 155 bits (78), Expect = 4e-34 Identities = 171/202 (84%) Strand = Plus / Plus Query: 425 agggtgctggtctagttcactttcaggatttcaatgctgaggttcttaggtgccttacca 484 ||||||||| |||||| ||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 11655443 agggtgctgttctagtccacttccaagatttcaatgctgaggtccttagatgccttacca 11655502 Query: 485 tcccaaatgtaaaagctaatctgttcaaggaatcatctcaaggaacattcacatctagga 544 | ||||||||||| |||||||| || |||||||||||| ||| || || |||||| | | Sbjct: 11655503 taccaaatgtaaaggctaatctattgaaggaatcatctgaagaaaagtttacatctggta 11655562 Query: 545 gtgttggtttttatgctggtgattggggtgaaatcgacaagttacttcttcgcggagatg 604 |||||||||| | ||||||||| ||| | ||||| |||| | |||||||| ||||||| Sbjct: 11655563 gtgttggtttctttgctggtgactggagcgaaattgacagtctgcttcttcgtggagatg 11655622 Query: 605 ctgtccaggataaaacaaccaa 626 ||| || ||||||| ||||||| Sbjct: 11655623 ctgacctggataaatcaaccaa 11655644 Score = 105 bits (53), Expect = 3e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 741 ctaccctagtggtgtagtttatatggcagggaaaaagcattactttggtgtaggtggtgg 800 ||||||| | ||| ||||||| ||||| || |||||||||||||| || ||||||||||| Sbjct: 11655852 ctaccctggaggtatagtttacatggcgggtaaaaagcattacttcggagtaggtggtgg 11655911 Query: 801 cacaaggcaatttctacgcttggttacagaagatggt 837 ||||||||| ||| | ||||||||||||||||||||| Sbjct: 11655912 cacaaggcactttgttcgcttggttacagaagatggt 11655948 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 842 tgcagtcggacctgcttgctgaagttactgatggatcatccaatgttagggaggtttgga 901 ||||||| ||||| |||||||||||| ||||||||||||| |||||| |||||||||||| Sbjct: 11656423 tgcagtccgacctacttgctgaagttgctgatggatcatcgaatgttcgggaggtttgga 11656482 Query: 902 aattctcattcaagtagactag 923 |||| || ||||| |||||||| Sbjct: 11656483 aattatcgttcaaatagactag 11656504 Score = 89.7 bits (45), Expect = 2e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 146 aggaatcgcccatcgcggccggcaacttggagcctgtggtggttgacgactccctatcga 205 ||||||||||| ||||||||||| | ||||||||||||||| |||| |||||||| |||| Sbjct: 11653983 aggaatcgcccgtcgcggccggcgaattggagcctgtggtgattgatgactccctgtcga 11654042 Query: 206 tttacaagg 214 ||||||||| Sbjct: 11654043 tttacaagg 11654051 Score = 87.7 bits (44), Expect = 8e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 279 aggtgggttgaagctgtgggaaggatcattggacttggtgaaaaccctaaattcagacat 338 ||||||||||||||| |||||||| ||| | ||||||||||| || |||| |||||||| Sbjct: 11654822 aggtgggttgaagctctgggaaggttcactagacttggtgaagactttaaactcagacat 11654881 Query: 339 caaagatgatcgactgcttatagaaggcaaac 370 |||||| || ||| ||||| |||||||||||| Sbjct: 11654882 caaagaagaccgattgcttttagaaggcaaac 11654913 Score = 77.8 bits (39), Expect = 8e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 658 tatgatatcatcctgatggctgagactgtttatgcattggattcacttcctagtctctac 717 |||||||||||||| |||||||||||||| |||||| | ||| || |||| ||||||| Sbjct: 11655676 tatgatatcatccttatggctgagactgtctatgcagtatcttccctccctaatctctac 11655735 Query: 718 aggctcatcaagaag 732 ||||||||||||||| Sbjct: 11655736 aggctcatcaagaag 11655750 Score = 67.9 bits (34), Expect = 8e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 383 taggatgtggacatggcctccctggtatctatgc 416 |||||||||||||||||||||||||||||||||| Sbjct: 11655322 taggatgtggacatggcctccctggtatctatgc 11655355 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 95 ccggccctccccctccgcctccgccgccagctgtcgaggtcctcctctccgagg 148 |||| ||||| || ||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 11653807 ccggacctcctccgccgccgccgccgccagccgtcgaggtgctcctctccgagg 11653860 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 229 tctgatgttttcggggtaaaaaactctgatttggttccaggaaaatatgaaggt 282 ||||||||||| || || |||||||||||||| || ||||| |||||||||||| Sbjct: 11654689 tctgatgtttttggagtcaaaaactctgatttagtcccagggaaatatgaaggt 11654742
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 155 bits (78), Expect = 4e-34 Identities = 171/202 (84%) Strand = Plus / Plus Query: 425 agggtgctggtctagttcactttcaggatttcaatgctgaggttcttaggtgccttacca 484 ||||||||| |||||| ||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 90077 agggtgctgttctagtccacttccaagatttcaatgctgaggtccttagatgccttacca 90136 Query: 485 tcccaaatgtaaaagctaatctgttcaaggaatcatctcaaggaacattcacatctagga 544 | ||||||||||| |||||||| || |||||||||||| ||| || || |||||| | | Sbjct: 90137 taccaaatgtaaaggctaatctattgaaggaatcatctgaagaaaagtttacatctggta 90196 Query: 545 gtgttggtttttatgctggtgattggggtgaaatcgacaagttacttcttcgcggagatg 604 |||||||||| | ||||||||| ||| | ||||| |||| | |||||||| ||||||| Sbjct: 90197 gtgttggtttctttgctggtgactggagcgaaattgacagtctgcttcttcgtggagatg 90256 Query: 605 ctgtccaggataaaacaaccaa 626 ||| || ||||||| ||||||| Sbjct: 90257 ctgacctggataaatcaaccaa 90278 Score = 105 bits (53), Expect = 3e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 741 ctaccctagtggtgtagtttatatggcagggaaaaagcattactttggtgtaggtggtgg 800 ||||||| | ||| ||||||| ||||| || |||||||||||||| || ||||||||||| Sbjct: 90486 ctaccctggaggtatagtttacatggcgggtaaaaagcattacttcggagtaggtggtgg 90545 Query: 801 cacaaggcaatttctacgcttggttacagaagatggt 837 ||||||||| ||| | ||||||||||||||||||||| Sbjct: 90546 cacaaggcactttgttcgcttggttacagaagatggt 90582 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 842 tgcagtcggacctgcttgctgaagttactgatggatcatccaatgttagggaggtttgga 901 ||||||| ||||| |||||||||||| ||||||||||||| |||||| |||||||||||| Sbjct: 91057 tgcagtccgacctacttgctgaagttgctgatggatcatcgaatgttcgggaggtttgga 91116 Query: 902 aattctcattcaagtagactag 923 |||| || ||||| |||||||| Sbjct: 91117 aattatcgttcaaatagactag 91138 Score = 89.7 bits (45), Expect = 2e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 146 aggaatcgcccatcgcggccggcaacttggagcctgtggtggttgacgactccctatcga 205 ||||||||||| ||||||||||| | ||||||||||||||| |||| |||||||| |||| Sbjct: 88617 aggaatcgcccgtcgcggccggcgaattggagcctgtggtgattgatgactccctgtcga 88676 Query: 206 tttacaagg 214 ||||||||| Sbjct: 88677 tttacaagg 88685 Score = 87.7 bits (44), Expect = 8e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 279 aggtgggttgaagctgtgggaaggatcattggacttggtgaaaaccctaaattcagacat 338 ||||||||||||||| |||||||| ||| | ||||||||||| || |||| |||||||| Sbjct: 89456 aggtgggttgaagctctgggaaggttcactagacttggtgaagactttaaactcagacat 89515 Query: 339 caaagatgatcgactgcttatagaaggcaaac 370 |||||| || ||| ||||| |||||||||||| Sbjct: 89516 caaagaagaccgattgcttttagaaggcaaac 89547 Score = 77.8 bits (39), Expect = 8e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 658 tatgatatcatcctgatggctgagactgtttatgcattggattcacttcctagtctctac 717 |||||||||||||| |||||||||||||| |||||| | ||| || |||| ||||||| Sbjct: 90310 tatgatatcatccttatggctgagactgtctatgcagtatcttccctccctaatctctac 90369 Query: 718 aggctcatcaagaag 732 ||||||||||||||| Sbjct: 90370 aggctcatcaagaag 90384 Score = 67.9 bits (34), Expect = 8e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 383 taggatgtggacatggcctccctggtatctatgc 416 |||||||||||||||||||||||||||||||||| Sbjct: 89956 taggatgtggacatggcctccctggtatctatgc 89989 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 95 ccggccctccccctccgcctccgccgccagctgtcgaggtcctcctctccgagg 148 |||| ||||| || ||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 88441 ccggacctcctccgccgccgccgccgccagccgtcgaggtgctcctctccgagg 88494 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 229 tctgatgttttcggggtaaaaaactctgatttggttccaggaaaatatgaaggt 282 ||||||||||| || || |||||||||||||| || ||||| |||||||||||| Sbjct: 89323 tctgatgtttttggagtcaaaaactctgatttagtcccagggaaatatgaaggt 89376
>ref|NM_001071330.1| Oryza sativa (japonica cultivar-group) Os10g0464500 (Os10g0464500) mRNA, complete cds Length = 2160 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgccgcc 122 |||||||||||||||||||||||| Sbjct: 104 ccctccccctccgcctccgccgcc 81
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgccgcc 122 |||||||||||||||||||||||| Sbjct: 28690 ccctccccctccgcctccgccgcc 28667
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgccgcc 122 |||||||||||||||||||||||| Sbjct: 16631552 ccctccccctccgcctccgccgcc 16631575 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgccgcca 123 ||||||||||||||| ||||||||| Sbjct: 17917800 ccctccccctccgccgccgccgcca 17917776
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 100 cctccccctccgcctccgccgcc 122 ||||||||||||||||||||||| Sbjct: 9373308 cctccccctccgcctccgccgcc 9373330 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccg 120 ||||||||||||||||||||| Sbjct: 8697820 cctccccctccgcctccgccg 8697800 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 tccccctccgcctccgccgcc 122 ||||||||||||||||||||| Sbjct: 27541093 tccccctccgcctccgccgcc 27541113
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 100 cctccccctccgcctccgccgcc 122 ||||||||||||||||||||||| Sbjct: 72587 cctccccctccgcctccgccgcc 72609
>emb|AL807799.5| Zebrafish DNA sequence from clone CH211-257P7 in linkage group 2, complete sequence Length = 175342 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 483 catcccaaatgtaaaagctaatc 505 ||||||||||||||||||||||| Sbjct: 70752 catcccaaatgtaaaagctaatc 70730
>emb|AL840636.10| Zebrafish DNA sequence from clone CH211-262K7 in linkage group 20, complete sequence Length = 174999 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 483 catcccaaatgtaaaagctaatc 505 ||||||||||||||||||||||| Sbjct: 70760 catcccaaatgtaaaagctaatc 70738
>ref|XM_425506.2| PREDICTED: Gallus gallus similar to OTTHUMP00000028966 (LOC427934), mRNA Length = 1086 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 87 cgccgctcccggccctccccctccgcctcc 116 ||||||||||| | |||||||||||||||| Sbjct: 200 cgccgctcccgcctctccccctccgcctcc 171
>gb|EF050536.1| Transfer vector pAcMLF9, complete sequence Length = 9366 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 4570 cctccgcctccgcctccgccgccagc 4545
>gb|DQ457003.1| Plutella xylostella multiple nucleopolyhedrovirus isolate CL3, complete genome Length = 134417 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 6056 cctccgcctccgcctccgccgccagc 6031
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 360 agaaggcaaacacatactagagttaggatgtgga 393 ||||||||||| |||| |||||||||| |||||| Sbjct: 3602244 agaaggcaaacgcatattagagttaggctgtgga 3602277
>ref|NM_117475.2| Arabidopsis thaliana unknown protein (AT4G14000) mRNA, complete cds Length = 1227 Score = 44.1 bits (22), Expect = 1.1 Identities = 58/70 (82%) Strand = Plus / Plus Query: 439 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 498 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 452 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 511 Query: 499 gctaatctgt 508 |||||||||| Sbjct: 512 gctaatctgt 521
>gb|AC130827.3| Mus musculus BAC clone RP23-405I7 from chromosome 13, complete sequence Length = 212140 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 481 accatcccaaatgtaaaagctaatctgttc 510 ||||||||||||| |||||||| ||||||| Sbjct: 76553 accatcccaaatgaaaaagctattctgttc 76582
>gb|AY145471.1| Rachiplusia ou multiple nucleopolyhedrovirus, complete genome Length = 131526 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 4785 cctccgcctccgcctccgccgccagc 4760
>gb|AC148995.2| Medicago truncatula chromosome 7 BAC clone mth2-49l23, complete sequence Length = 128239 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 890 gggaggtttggaaattctcatt 911 |||||||||||||||||||||| Sbjct: 46680 gggaggtttggaaattctcatt 46701
>gb|AY114714.1| Arabidopsis thaliana unknown protein (At4g14000) mRNA, complete cds Length = 1067 Score = 44.1 bits (22), Expect = 1.1 Identities = 58/70 (82%) Strand = Plus / Plus Query: 439 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 498 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 418 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 477 Query: 499 gctaatctgt 508 |||||||||| Sbjct: 478 gctaatctgt 487
>gb|AY072417.1| Arabidopsis thaliana unknown protein (At4g14000) mRNA, complete cds Length = 1100 Score = 44.1 bits (22), Expect = 1.1 Identities = 58/70 (82%) Strand = Plus / Plus Query: 439 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 498 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 440 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 499 Query: 499 gctaatctgt 508 |||||||||| Sbjct: 500 gctaatctgt 509
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 44.1 bits (22), Expect = 1.1 Identities = 58/70 (82%) Strand = Plus / Plus Query: 439 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 498 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 49594 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 49653 Query: 499 gctaatctgt 508 |||||||||| Sbjct: 49654 gctaatctgt 49663
>gb|AY086588.1| Arabidopsis thaliana clone 25991 mRNA, complete sequence Length = 1227 Score = 44.1 bits (22), Expect = 1.1 Identities = 58/70 (82%) Strand = Plus / Plus Query: 439 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 498 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 452 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 511 Query: 499 gctaatctgt 508 |||||||||| Sbjct: 512 gctaatctgt 521
>gb|U64896.1|AFU64896 Anagrapha falcifera nuclear polyhedrosis virus protein-typrosine phosphatase, lef-2, polyhedrin, vp78 and protein kinase genes, complete cds Length = 6289 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 4478 cctccgcctccgcctccgccgccagc 4453
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 44.1 bits (22), Expect = 1.1 Identities = 58/70 (82%) Strand = Plus / Plus Query: 439 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 498 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 183809 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 183868 Query: 499 gctaatctgt 508 |||||||||| Sbjct: 183869 gctaatctgt 183878
>emb|Z11662.1|BANPA61KD Autographa californica nuclear polyhedrosis virus gene for 61 kD viral protein Length = 2362 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 1431 cctccgcctccgcctccgccgccagc 1456
>gb|L22858.1|L22858 Autographa californica nucleopolyhedrovirus clone C6, complete genome Length = 133894 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 6078 cctccgcctccgcctccgccgccagc 6053
>emb|CR352245.9| Zebrafish DNA sequence from clone DKEY-153L11 in linkage group 16, complete sequence Length = 136903 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 508 ttcaaggaatcatctcaaggaa 529 |||||||||||||||||||||| Sbjct: 34565 ttcaaggaatcatctcaaggaa 34544
>gb|AC013472.8| Homo sapiens BAC clone RP11-503P10 from 2, complete sequence Length = 149481 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgccg 120 |||||||||||||||||||||| Sbjct: 58945 ccctccccctccgcctccgccg 58966
>emb|BX511161.6| Zebrafish DNA sequence from clone DKEY-248G17 in linkage group 16, complete sequence Length = 101801 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 508 ttcaaggaatcatctcaaggaa 529 |||||||||||||||||||||| Sbjct: 93642 ttcaaggaatcatctcaaggaa 93663
>emb|CR604092.1| full-length cDNA clone CS0DF001YJ20 of Fetal brain of Homo sapiens (human) Length = 1763 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgccg 120 |||||||||||||||||||||| Sbjct: 98 ccctccccctccgcctccgccg 119
>emb|BX827894.1|CNS0A30D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1194 Score = 44.1 bits (22), Expect = 1.1 Identities = 58/70 (82%) Strand = Plus / Plus Query: 439 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 498 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 414 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 473 Query: 499 gctaatctgt 508 |||||||||| Sbjct: 474 gctaatctgt 483
>emb|BX829113.1|CNS0A2AY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL71ZA09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1138 Score = 44.1 bits (22), Expect = 1.1 Identities = 58/70 (82%) Strand = Plus / Plus Query: 439 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 498 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 432 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 491 Query: 499 gctaatctgt 508 |||||||||| Sbjct: 492 gctaatctgt 501
>emb|AJ332895.1|HSA332895 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KA9C Length = 610 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgccg 120 |||||||||||||||||||||| Sbjct: 149 ccctccccctccgcctccgccg 170
>gb|AF068270.1|AF068270 Rachiplusia ou nuclear polyhedrosis virus protein-tyrosine phosphatase (ptp), late expression factor-2 (lef-2), occlusion matrix protein (polh), capsid-associated protein, and protein kinase (pk1) genes, complete cds; and unknown genes Length = 7781 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 4627 cctccgcctccgcctccgccgccagc 4602
>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete sequence Length = 223059 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgccg 120 |||||||||||||||||||||| Sbjct: 43521 ccctccccctccgcctccgccg 43542
>gb|BC011557.1| Homo sapiens microtubule-associated protein, RP/EB family, member 3, mRNA (cDNA clone MGC:20025 IMAGE:4561018), complete cds Length = 1870 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgccg 120 |||||||||||||||||||||| Sbjct: 93 ccctccccctccgcctccgccg 114
>gb|U02440.1|XXU02440 Cloning vector pBacPAK9, complete sequence Length = 5538 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 2144 cctccgcctccgcctccgccgccagc 2119
>gb|U55760.1|BTU55760 Baculovirus transfer vector pBacPAK-His3, complete sequence, beta-lactamase (bla) gene, complete cds Length = 5413 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 2079 cctccgcctccgcctccgccgccagc 2054
>gb|U55759.1|BTU55759 Baculovirus transfer vector pBacPAK-His2, complete sequence, beta-lactamase (bla) gene, complete cds Length = 5415 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 2081 cctccgcctccgcctccgccgccagc 2056
>gb|U55758.1|BTU55758 Baculovirus transfer vector pBacPAK-His1, complete sequence, beta-lactamase (bla) gene, complete cds Length = 5414 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 2080 cctccgcctccgcctccgccgccagc 2055
>gb|U02452.1|U02452 Cloning vector pAcUW31, complete sequence Length = 8532 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 3732 cctccgcctccgcctccgccgccagc 3707
>gb|U02450.1|U02450 Cloning vector pBacPAK1, complete sequence Length = 5461 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 2067 cctccgcctccgcctccgccgccagc 2042
>gb|U02446.1|U02446 Cloning vector pBacPAK8, complete sequence Length = 5538 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 2144 cctccgcctccgcctccgccgccagc 2119
>gb|M75679.1|NPHLACBD Autographa californica nuclear polyhedrosis virus beta-D-galactosidase gene, complete cds Length = 9430 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccgccagc 125 ||||| |||||||||||||||||||| Sbjct: 6277 cctccgcctccgcctccgccgccagc 6252
>ref|NM_012326.2| Homo sapiens microtubule-associated protein, RP/EB family, member 3 (MAPRE3), mRNA dbj|AB025186.1| Homo sapiens mRNA for EB3 protein, complete cds Length = 1880 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgccg 120 |||||||||||||||||||||| Sbjct: 108 ccctccccctccgcctccgccg 129
>emb|CT831666.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126O18, full insert sequence Length = 1836 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 353 ccctccccctccgcctccgcc 373
>dbj|AK242149.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075153F01, full insert sequence Length = 2060 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 tccccctccgcctccgccgcc 122 ||||||||||||||||||||| Sbjct: 246 tccccctccgcctccgccgcc 226
>ref|NM_001073104.1| Oryza sativa (japonica cultivar-group) Os12g0279100 (Os12g0279100) mRNA, complete cds Length = 4505 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 137 ccctccccctccgcctccgcc 157
>ref|NM_001068706.1| Oryza sativa (japonica cultivar-group) Os08g0502800 (Os08g0502800) mRNA, complete cds Length = 1799 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 328 ccctccccctccgcctccgcc 348
>ref|NM_001067288.1| Oryza sativa (japonica cultivar-group) Os08g0100500 (Os08g0100500) mRNA, complete cds Length = 4979 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 gccctccccctccgcctccgccgcc 122 ||||||| ||||||||||||||||| Sbjct: 124 gccctccgcctccgcctccgccgcc 148
>ref|NM_001066317.1| Oryza sativa (japonica cultivar-group) Os07g0516300 (Os07g0516300) mRNA, complete cds Length = 935 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 gccctccccctccgcctccgccgcc 122 ||||||||||||| ||||||||||| Sbjct: 388 gccctccccctccccctccgccgcc 364
>ref|NM_001056179.1| Oryza sativa (japonica cultivar-group) Os03g0264800 (Os03g0264800) mRNA, complete cds Length = 2922 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 cctccccctccgcctccgccg 120 ||||||||||||||||||||| Sbjct: 226 cctccccctccgcctccgccg 246
>gb|AC150860.4| Bos taurus BAC CH240-424I20 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 165874 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgctcccggccctccccctcc 110 ||||||||||||||||||||| Sbjct: 26570 cgctcccggccctccccctcc 26550
>ref|XM_843872.1| PREDICTED: Canis familiaris similar to ankyrin repeat and BTB (POZ) domain containing 2, transcript variant 2 (LOC483430), mRNA Length = 3162 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 852 ccctccccctccgcctccgcc 832
>ref|XM_540548.2| PREDICTED: Canis familiaris similar to ankyrin repeat and BTB (POZ) domain containing 2, transcript variant 1 (LOC483430), mRNA Length = 2739 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 852 ccctccccctccgcctccgcc 832
>gb|AC126957.4| Rattus norvegicus 1 BAC CH230-12B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 215911 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 899 ggaaattctcattcaagtaga 919 ||||||||||||||||||||| Sbjct: 183279 ggaaattctcattcaagtaga 183259
>gb|AC104519.2| Genomic sequence for Mus musculus, clone RP23-8L6, complete sequence Length = 197070 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 910 ttcaagtagactagcatagcctctg 934 |||||||||||||||| |||||||| Sbjct: 162233 ttcaagtagactagcaaagcctctg 162257
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 10477282 ccctccccctccgcctccgcc 10477262
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 gccctccccctccgcctccgccgcc 122 ||||||| ||||||||||||||||| Sbjct: 29921 gccctccgcctccgcctccgccgcc 29945 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 24830775 ccctccccctccgcctccgcc 24830795
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 gccctccccctccgcctccgccgcc 122 ||||||||||||| ||||||||||| Sbjct: 19834317 gccctccccctccccctccgccgcc 19834341
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgccgcca 123 |||||||||||| |||||||||||| Sbjct: 28303310 ccctccccctccccctccgccgcca 28303286
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgccgcca 123 ||||||||||||||| ||||||||| Sbjct: 14241 ccctccccctccgccgccgccgcca 14265
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 cctccccctccgcctccgccg 120 ||||||||||||||||||||| Sbjct: 43636 cctccccctccgcctccgccg 43616
>emb|CR550302.15| Zebrafish DNA sequence from clone DKEY-145I3 in linkage group 11, complete sequence Length = 202610 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1036 ctttcaagttgactgtttatg 1056 ||||||||||||||||||||| Sbjct: 28128 ctttcaagttgactgtttatg 28148
>emb|BX957333.8| Zebrafish DNA sequence from clone CH211-10M5 in linkage group 25, complete sequence Length = 170161 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1036 ctttcaagttgactgtttatg 1056 ||||||||||||||||||||| Sbjct: 54960 ctttcaagttgactgtttatg 54980
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 131576 ccctccccctccgcctccgcc 131596
>emb|BX572647.10| Zebrafish DNA sequence from clone CH211-149N1 in linkage group 10, complete sequence Length = 190639 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1021 gcactgttagtttcactttca 1041 ||||||||||||||||||||| Sbjct: 77132 gcactgttagtttcactttca 77152
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgccgcca 123 |||||||||||| |||||||||||| Sbjct: 15888 ccctccccctccccctccgccgcca 15864
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 tccccctccgcctccgccgcc 122 ||||||||||||||||||||| Sbjct: 100744 tccccctccgcctccgccgcc 100724
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgccgcca 123 |||||||||||| |||||||||||| Sbjct: 101339 ccctccccctccccctccgccgcca 101315
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 gccctccccctccgcctccgccgcc 122 ||||||||||||| ||||||||||| Sbjct: 74476 gccctccccctccccctccgccgcc 74500
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 35221 ccctccccctccgcctccgcc 35241
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 gccctccccctccgcctccgccgcc 122 ||||||| ||||||||||||||||| Sbjct: 29921 gccctccgcctccgcctccgccgcc 29945
>dbj|AK120880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K12, full insert sequence Length = 4982 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 gccctccccctccgcctccgccgcc 122 ||||||| ||||||||||||||||| Sbjct: 127 gccctccgcctccgcctccgccgcc 151
>dbj|AK105444.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-A11, full insert sequence Length = 1799 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 328 ccctccccctccgcctccgcc 348
>dbj|AK102726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105M03, full insert sequence Length = 938 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 gccctccccctccgcctccgccgcc 122 ||||||||||||| ||||||||||| Sbjct: 391 gccctccccctcctcctccgccgcc 367
>emb|BX829267.1|CNS0A4DH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL86ZA09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1076 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 439 gttcactttcaggatttcaatgctgaggttctt 471 ||||| || ||||| |||||||||||||||||| Sbjct: 438 gttcatttccaggacttcaatgctgaggttctt 470
>dbj|AK069570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025A03, full insert sequence Length = 889 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 gccctccccctccgcctccgccgcc 122 ||||||||||||| ||||||||||| Sbjct: 388 gccctccccctccccctccgccgcc 364
>dbj|AK065251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J08, full insert sequence Length = 4503 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 138 ccctccccctccgcctccgcc 158
>ref|XM_725828.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02963) partial mRNA Length = 2250 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 tgatttggttccaggaaaatatgaa 279 |||||| |||||||||||||||||| Sbjct: 1755 tgatttcgttccaggaaaatatgaa 1779
>ref|XM_740404.1| Plasmodium chabaudi chabaudi hypothetical protein (PC105339.00.0) partial mRNA Length = 759 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 tgatttggttccaggaaaatatgaa 279 |||||| |||||||||||||||||| Sbjct: 297 tgattttgttccaggaaaatatgaa 321
>emb|AL772421.5|CNS08C9Z Oryza sativa chromosome 12, . BAC OJ1007_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130672 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 3088 ccctccccctccgcctccgcc 3068
>emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC OSJNBb0094I20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130454 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 ccctccccctccgcctccgcc 119 ||||||||||||||||||||| Sbjct: 129783 ccctccccctccgcctccgcc 129763 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 203,744,848 Number of extensions: 11169692 Number of successful extensions: 263168 Number of sequences better than 10.0: 85 Number of HSP's gapped: 263136 Number of HSP's successfully gapped: 110 Length of query: 1136 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1113 Effective length of database: 18,503,978,556 Effective search space: 20594928132828 Effective search space used: 20594928132828 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)