ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf71d11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os11g0637800:Os11g0637800 | 553 | e-157 | 2 | AK103516:Os01g0782500 | 149 | 3e-36 | 3 | AK064440:Os05g0502200 | 146 | 3e-35 | 4 | AK108318:Os10g0497100 | 34 | 0.21 | 5 | AK069784:Os01g0541900 | 31 | 2.4 | 6 | AK111217: | 30 | 4.0 | 7 | AK108715:Os05g0529700 | 30 | 5.3 | 8 | AK064168:Os05g0529700 | 30 | 5.3 | 9 | AK062298:Os05g0529700 | 30 | 5.3 | 10 | Os06g0129000:Os06g0129000 | 29 | 9.0 | 11 | AK121260: | 29 | 9.0 | 12 | AK103766:Os01g0898300 | 29 | 9.0 |
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>Os11g0637800:Os11g0637800 | Length = 397 Score = 553 bits (1425), Expect = e-157 Identities = 282/384 (73%), Positives = 310/384 (80%), Gaps = 35/384 (9%) Frame = +1 Query: 115 VQAVLFLTIRPFSKRLYRQINVFXXXXXXXXXXXXXXXXAGVKVQVYADPETWKVMGKEH 294 +QAVLFL+IRPFSK LYR+IN F AGVK+Q++AD ET+K MG EH Sbjct: 14 LQAVLFLSIRPFSKSLYRRINRFLAELLWLQLVWLVDWWAGVKIQLHADDETYKAMGNEH 73 Query: 295 ALLISNHRSDIDWLVGWILAQRSGCLGSAIAIMKKSSKFLPVIGWSMWFAEYLFLERSWA 474 AL+ISNHRSDIDWL+GWILAQRSGCLGS +A+MKKSSKFLPVIGWSMWFAEYLFLERSWA Sbjct: 74 ALVISNHRSDIDWLIGWILAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFAEYLFLERSWA 133 Query: 475 KDEKTLKSGLQRLKDFPRSFWLALFVEGTRFTPAKLLAAQEYAVSQGLTAPRNVLIPRTK 654 KDEKTLK GLQRLKDFPR FWLALFVEGTRFTPAKLLAAQEYAVSQGL APRNVLIPRTK Sbjct: 134 KDEKTLKWGLQRLKDFPRPFWLALFVEGTRFTPAKLLAAQEYAVSQGLPAPRNVLIPRTK 193 Query: 655 GFVSAVSIMRDFVPAIYDTTVIIPEDSPKPTMLRILQGQSSVVHVRIKRHSMSDMPNSDE 834 GFVSAV+IMRDFVPAIYDTTVIIP+DSP+PTMLRIL+GQSSVVHVR+KRH+MS+MP S++ Sbjct: 194 GFVSAVTIMRDFVPAIYDTTVIIPKDSPQPTMLRILKGQSSVVHVRMKRHAMSEMPKSED 253 Query: 835 DVSKWCKDIFVAKDALLDRHITTGTFDEEIIPIGRPVKSLM------------------- 957 DVSKWCKDIFVAKDALLD+H+ TGTFDEEI PIGRPVKSL+ Sbjct: 254 DVSKWCKDIFVAKDALLDKHLATGTFDEEIRPIGRPVKSLLAVWGLSGLKLKTWVEAPSF 313 Query: 958 ----------------VVLSWSCLLLYGAHRFLQWTQLLSTWKGVILFATGLAMVTAVMH 1089 V L WSCLLLYGA + WTQLLSTWKGV GLA+VTAVMH Sbjct: 314 VRAKSEDQGRCFAGTTVTLFWSCLLLYGAVKLFLWTQLLSTWKGVGFTGLGLALVTAVMH 373 Query: 1090 VFIMFSQAERSSSAKAARDRVKRD 1161 VFIMFSQ+ERSSSAKAAR+RVK+D Sbjct: 374 VFIMFSQSERSSSAKAARNRVKKD 397
>AK103516:Os01g0782500 | Length = 399 Score = 149 bits (377), Expect = 3e-36 Identities = 80/216 (37%), Positives = 120/216 (55%), Gaps = 1/216 (0%) Frame = +1 Query: 277 VMGKEHALLISNHRSDIDWLVGWILAQRSGCLGSAIAIMKKSSKFLPVIGWSMWFAEYLF 456 V+ K+ LL +NHR+++DW+ W LA R G LG I+K S LPV W+ E++ Sbjct: 112 VLPKKRVLLFANHRTEVDWMYLWDLALRKGYLGYIKYILKSSLMKLPVFSWAFHIFEFIP 171 Query: 457 LERSWAKDEKTLKSGLQRLKDFPRSFWLALFVEGTRFTPAKLLAAQEYAVSQGLTAPRNV 636 +ER W DE +++ L KD WLA+F EGT +T K + +QEYA GL +NV Sbjct: 172 VERKWEIDEAIIQNKLSAFKDPRDPLWLAVFPEGTDYTEKKCIKSQEYASEHGLPILKNV 231 Query: 637 LIPRTKGFVSAVSIMRDFVPAIYDTTVIIPEDSPKPTMLRILQG-QSSVVHVRIKRHSMS 813 L+P+TKGF+ + ++ + A+YD T+ P L I+ G S VH+ I+ + Sbjct: 232 LLPKTKGFLCCLQELKSSLDAVYDVTIAYKH--RLPDFLDIIYGTDPSEVHIHIRTVKLC 289 Query: 814 DMPNSDEDVSKWCKDIFVAKDALLDRHITTGTFDEE 921 D+P S+++V+ W + F KD LL G F +E Sbjct: 290 DIPTSEDEVTDWMIERFRQKDQLLSDFFMQGHFPDE 325
>AK064440:Os05g0502200 | Length = 397 Score = 146 bits (369), Expect = 3e-35 Identities = 87/263 (33%), Positives = 137/263 (52%), Gaps = 5/263 (1%) Frame = +1 Query: 286 KEHALLISNHRSDIDWLVGWILAQRSGCLGSAIAIMKKSSKFLPVIGWSMWFAEYLFLER 465 KE LL +NHR+++DW+ W LA R G L I+KKS LP+ W+ E++ +ER Sbjct: 114 KERVLLFANHRTEVDWMYLWDLALRKGRLQCIKYILKKSLMKLPIFNWAFHIIEFIPVER 173 Query: 466 SWAKDEKTLKSGLQRLKDFPRSFWLALFVEGTRFTPAKLLAAQEYAVSQGLTAPRNVLIP 645 W DE ++S L LK+ WLA+F EGT +T K + +QEYA GL NVL+P Sbjct: 174 KWEVDEPLIRSRLSELKNPKDPLWLAVFPEGTDYTEKKCIKSQEYAKEHGLPILNNVLLP 233 Query: 646 RTKGFVSAVSIMRDFVPAIYDTTVIIPEDSPKPTMLRILQGQSSVVHVRIKRHSMSDMPN 825 +TKGF + +RD + ++ D T+ + P M + S VH+ +K +SD+P Sbjct: 234 KTKGFHCCLQELRDSMDSVCDITIAY-KHRPPTFMDNVYGIDPSEVHIHVKIIQVSDIPT 292 Query: 826 SDEDVSKWCKDIFVAKDALLDRHITTGTF----DEEIIPIGRPVKSLMVVLSWSCLLLYG 993 S+++V+ W + F K+ LL G F E+ + + + + + V+S + +L Y Sbjct: 293 SEDEVADWLIERFKLKNKLLSDFSALGHFPNEGTEDDLSTLKCIANFVAVISTTTVLTYL 352 Query: 994 AHRFLQWTQLLSTWKGVIL-FAT 1059 W ++ + L FAT Sbjct: 353 TLFSSVWFKIFVAFSSAFLTFAT 375
>AK108318:Os10g0497100 | Length = 332 Score = 34.3 bits (77), Expect = 0.21 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 2/107 (1%) Frame = +1 Query: 295 ALLISNHRSDIDWLVGWILAQRSGCLGSAIAIMKKSSKFL-PVIGWSMWFAEYLFLERSW 471 A+ ++NH+S +D + +L LG + K+S F+ P+IGW+M+ + L R Sbjct: 166 AVYVANHQSFLD--IYTLLT-----LGRCFKFISKTSIFMFPIIGWAMYLLGVIPLRR-- 216 Query: 472 AKDEKTLKSGLQRLKDF-PRSFWLALFVEGTRFTPAKLLAAQEYAVS 609 D ++ L+R D + + F EGTR KL A + A S Sbjct: 217 -MDSRSQLDCLKRCVDLVKKGASVFFFPEGTRSKDGKLGAFKRGAFS 262
>AK069784:Os01g0541900 | Length = 657 Score = 30.8 bits (68), Expect = 2.4 Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = -2 Query: 1072 PLPIQ*QRGSLLSTLTRAGSTVRIYERHIGGDMTKTEPPSKISLDDQLV*FPHQKYQLLY 893 PL + SLLS + + GS +YE +GG+ + P +S D L F +Q L + Sbjct: 24 PLHLPPSSFSLLSPIAK-GSESTVYEARLGGERVAAKKP-VLSTSDDLDKFHYQLQLLWW 81 Query: 892 VCPI 881 V PI Sbjct: 82 VLPI 85
>AK111217: | Length = 686 Score = 30.0 bits (66), Expect = 4.0 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -2 Query: 556 PLQKGQAKMIWGSLSTFEDPI 494 P++ GQ ++ WG S FEDPI Sbjct: 11 PVEDGQKRLSWGLTSLFEDPI 31
>AK108715:Os05g0529700 | Length = 344 Score = 29.6 bits (65), Expect = 5.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 660 CISCKYHA*LCPSYLRYNSDY 722 CI CKY A +CP+ R DY Sbjct: 171 CIGCKYCANVCPNVFRIEEDY 191
>AK064168:Os05g0529700 | Length = 350 Score = 29.6 bits (65), Expect = 5.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 660 CISCKYHA*LCPSYLRYNSDY 722 CI CKY A +CP+ R DY Sbjct: 171 CIGCKYCANVCPNVFRIEEDY 191
>AK062298:Os05g0529700 | Length = 279 Score = 29.6 bits (65), Expect = 5.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 660 CISCKYHA*LCPSYLRYNSDY 722 CI CKY A +CP+ R DY Sbjct: 171 CIGCKYCANVCPNVFRIEEDY 191
>Os06g0129000:Os06g0129000 | Length = 414 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/67 (22%), Positives = 33/67 (49%) Frame = +1 Query: 271 WKVMGKEHALLISNHRSDIDWLVGWILAQRSGCLGSAIAIMKKSSKFLPVIGWSMWFAEY 450 W+V GK++ + +++WLVGW +A + L +A +++ + ++ Sbjct: 335 WRVQGKDYFEGVE----ELNWLVGWSVAMKEAALLAA--------RWIVAVWSTVTVGTL 382 Query: 451 LFLERSW 471 +F +R W Sbjct: 383 VFYKRCW 389
>AK121260: | Length = 968 Score = 28.9 bits (63), Expect = 9.0 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Frame = +1 Query: 559 TRFTPAKLLAAQEYAVSQGLTAPRNVLIPRTKGFVSAVSIMRDFVPAIYD------TTVI 720 TR T + A E LT L R V A S RD VP D + Sbjct: 589 TRETNFDITVASEIMAVLALTTSLGDLRERLGRMVVAAS--RDGVPITADDLGVGGALAV 646 Query: 721 IPEDSPKPTMLRILQGQSSVVH 786 + D+ KPT+++ L+G +VH Sbjct: 647 LMRDAIKPTLMQTLEGTPVLVH 668
>AK103766:Os01g0898300 | Length = 980 Score = 28.9 bits (63), Expect = 9.0 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +1 Query: 778 VVHVRIKRHSMSDMPNSDEDVSKWCKDIFVAKDALL 885 + H+R H + PN+ DV KW ++VA + L Sbjct: 381 IKHLRKCMHCAVESPNAQNDVDKWNSALYVALEECL 416 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 39,845,066 Number of extensions: 931944 Number of successful extensions: 2323 Number of sequences better than 10.0: 12 Number of HSP's gapped: 2319 Number of HSP's successfully gapped: 13 Length of query: 459 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 355 Effective length of database: 11,235,591 Effective search space: 3988634805 Effective search space used: 3988634805 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
