ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf65g21 |
|---|---|
| Clone Library Name | barley_pub |
>AK104231:Os11g0602900 | Length = 235 Score = 228 bits (581), Expect = 6e-60 Identities = 112/142 (78%), Positives = 124/142 (87%) Frame = +3 Query: 306 ADVMGGRKARMNKEQEQQAEKSIVGEFSTFKHVRGILSMGRYXXXXXXXXXXXILLGDAP 485 A V+GGR A MN EQ+++AEKS+VGEFST KHVRGILSMGR+ ILLGDAP Sbjct: 94 ASVVGGRTAPMNDEQQEEAEKSVVGEFSTVKHVRGILSMGRHSDPNSGGSSFSILLGDAP 153 Query: 486 HLDGQYAVFGRVTKGDDTLRKLERLPTHKEGIFVMPIERIEILSTYYYDIDVESCEAEKS 665 HLDGQYAVFGR+TKGDDTLRKLE+LPT +EGIFVMPIERI ILSTYYYD+D+ESCEAEKS Sbjct: 154 HLDGQYAVFGRLTKGDDTLRKLEQLPTRREGIFVMPIERISILSTYYYDVDLESCEAEKS 213 Query: 666 ILKRRLSESASEVERWRRKCFA 731 IL+RRLSESASEVERWRRKCFA Sbjct: 214 ILRRRLSESASEVERWRRKCFA 235 Score = 122 bits (305), Expect = 6e-28 Identities = 57/69 (82%), Positives = 60/69 (86%) Frame = +2 Query: 128 DPNLGSARVVFQLNHGDIEFGFFPHVAPKTVEHIFKLVQLGCYNTNHFFRVDKGFVAQVC 307 DPNLGSARVVFQ HGDIEFGFFPHVAPKTVEHI+KLV+LGCYNTNHFFRVDKGFVAQV Sbjct: 35 DPNLGSARVVFQTTHGDIEFGFFPHVAPKTVEHIYKLVRLGCYNTNHFFRVDKGFVAQVA 94 Query: 308 RCHGR*KSP 334 G +P Sbjct: 95 SVVGGRTAP 103
>AK068821:Os11g0602900 | Length = 235 Score = 228 bits (581), Expect = 6e-60 Identities = 112/142 (78%), Positives = 124/142 (87%) Frame = +3 Query: 306 ADVMGGRKARMNKEQEQQAEKSIVGEFSTFKHVRGILSMGRYXXXXXXXXXXXILLGDAP 485 A V+GGR A MN EQ+++AEKS+VGEFST KHVRGILSMGR+ ILLGDAP Sbjct: 94 ASVVGGRTAPMNDEQQEEAEKSVVGEFSTVKHVRGILSMGRHSDPNSGGSSFSILLGDAP 153 Query: 486 HLDGQYAVFGRVTKGDDTLRKLERLPTHKEGIFVMPIERIEILSTYYYDIDVESCEAEKS 665 HLDGQYAVFGR+TKGDDTLRKLE+LPT +EGIFVMPIERI ILSTYYYD+D+ESCEAEKS Sbjct: 154 HLDGQYAVFGRLTKGDDTLRKLEQLPTRREGIFVMPIERISILSTYYYDVDLESCEAEKS 213 Query: 666 ILKRRLSESASEVERWRRKCFA 731 IL+RRLSESASEVERWRRKCFA Sbjct: 214 ILRRRLSESASEVERWRRKCFA 235 Score = 122 bits (305), Expect = 6e-28 Identities = 57/69 (82%), Positives = 60/69 (86%) Frame = +2 Query: 128 DPNLGSARVVFQLNHGDIEFGFFPHVAPKTVEHIFKLVQLGCYNTNHFFRVDKGFVAQVC 307 DPNLGSARVVFQ HGDIEFGFFPHVAPKTVEHI+KLV+LGCYNTNHFFRVDKGFVAQV Sbjct: 35 DPNLGSARVVFQTTHGDIEFGFFPHVAPKTVEHIYKLVRLGCYNTNHFFRVDKGFVAQVA 94 Query: 308 RCHGR*KSP 334 G +P Sbjct: 95 SVVGGRTAP 103
>AK059904:Os11g0602900 | Length = 235 Score = 228 bits (581), Expect = 6e-60 Identities = 112/142 (78%), Positives = 124/142 (87%) Frame = +3 Query: 306 ADVMGGRKARMNKEQEQQAEKSIVGEFSTFKHVRGILSMGRYXXXXXXXXXXXILLGDAP 485 A V+GGR A MN EQ+++AEKS+VGEFST KHVRGILSMGR+ ILLGDAP Sbjct: 94 ASVVGGRTAPMNDEQQEEAEKSVVGEFSTVKHVRGILSMGRHSDPNSGGSSFSILLGDAP 153 Query: 486 HLDGQYAVFGRVTKGDDTLRKLERLPTHKEGIFVMPIERIEILSTYYYDIDVESCEAEKS 665 HLDGQYAVFGR+TKGDDTLRKLE+LPT +EGIFVMPIERI ILSTYYYD+D+ESCEAEKS Sbjct: 154 HLDGQYAVFGRLTKGDDTLRKLEQLPTRREGIFVMPIERISILSTYYYDVDLESCEAEKS 213 Query: 666 ILKRRLSESASEVERWRRKCFA 731 IL+RRLSESASEVERWRRKCFA Sbjct: 214 ILRRRLSESASEVERWRRKCFA 235 Score = 122 bits (305), Expect = 6e-28 Identities = 57/69 (82%), Positives = 60/69 (86%) Frame = +2 Query: 128 DPNLGSARVVFQLNHGDIEFGFFPHVAPKTVEHIFKLVQLGCYNTNHFFRVDKGFVAQVC 307 DPNLGSARVVFQ HGDIEFGFFPHVAPKTVEHI+KLV+LGCYNTNHFFRVDKGFVAQV Sbjct: 35 DPNLGSARVVFQTTHGDIEFGFFPHVAPKTVEHIYKLVRLGCYNTNHFFRVDKGFVAQVA 94 Query: 308 RCHGR*KSP 334 G +P Sbjct: 95 SVVGGRTAP 103
>AK102337:Os03g0201100 | Length = 462 Score = 38.9 bits (89), Expect(2) = 1e-05 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 5/108 (4%) Frame = +3 Query: 405 RGILSMGRYXXXXXXXXXXXILLGDAPHLDGQYAVFGRVTKGDDTLRKLERLPTHKEGIF 584 RG++SM IL APHL+ ++ VFG V G TL +E++P + Sbjct: 304 RGVVSMAN-SGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGLTTLSAMEKVPVDDDD-- 360 Query: 585 VMPIERIEILSTY-----YYDIDVESCEAEKSILKRRLSESASEVERW 713 P+E I+IL Y + D E E K K++ E +V W Sbjct: 361 -RPLEEIKILKVSVFVNPYTEPDEEEEEKAKEEEKKK-DEDYDKVGSW 406 Score = 28.5 bits (62), Expect(2) = 1e-05 Identities = 15/50 (30%), Positives = 21/50 (42%) Frame = +2 Query: 152 VVFQLNHGDIEFGFFPHVAPKTVEHIFKLVQLGCYNTNHFFRVDKGFVAQ 301 V HGD+ + P+T E+ + G YN F R K F+ Q Sbjct: 223 VQLHTTHGDLNLELHCDITPRTCENFLTHCENGYYNGLIFHRSIKNFMIQ 272
>AK105360:Os06g0130500 | Length = 160 Score = 33.1 bits (74), Expect(2) = 4e-05 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +2 Query: 152 VVFQLNHGDIEFGFFPHVAPKTVEHIFKLVQLGCYNTNHFFRVDKGFVAQ 301 V N GDI+ F AP+T E+ L G Y+ F R KGF+ Q Sbjct: 3 VTLHTNLGDIKCEVFCDQAPRTAENFLALCASGYYDGTIFHRNIKGFMIQ 52 Score = 32.3 bits (72), Expect(2) = 4e-05 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 2/87 (2%) Frame = +3 Query: 312 VMGGRKARMNKEQEQQAEKSIVGEF-STFKH-VRGILSMGRYXXXXXXXXXXXILLGDAP 485 + GG K K EF + KH RG++SM I P Sbjct: 51 IQGGDPTGTGKGGTSIWGKKFADEFRESLKHNARGVMSMAN-SGPNTNGSQFFITYAKQP 109 Query: 486 HLDGQYAVFGRVTKGDDTLRKLERLPT 566 HL+G Y VF +V G + L +E+ T Sbjct: 110 HLNGHYTVFAKVIHGFEVLDLMEKAQT 136
>AK070751:Os08g0292600 | Length = 327 Score = 38.5 bits (88), Expect = 0.008 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = +3 Query: 474 GDAPHLDGQYAVFGRVTKGDDTLRKLERLPTHKEGIFVMPIERIEILSTYYYDIDVESCE 653 G P LDGQ VFG V +G + + + +PT+K P ERI + + I E + Sbjct: 240 GPCPELDGQNIVFGTVLEGMNVITSIATIPTYK------PAERIRFFNDFAQLIGDERAQ 293 Query: 654 AEKSILKRRL 683 +++ R L Sbjct: 294 TARALWDRPL 303
>AK069211:Os08g0292600 | Length = 327 Score = 38.5 bits (88), Expect = 0.008 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = +3 Query: 474 GDAPHLDGQYAVFGRVTKGDDTLRKLERLPTHKEGIFVMPIERIEILSTYYYDIDVESCE 653 G P LDGQ VFG V +G + + + +PT+K P ERI + + I E + Sbjct: 240 GPCPELDGQNIVFGTVLEGMNVITSIATIPTYK------PAERIRFFNDFAQLIGDERAQ 293 Query: 654 AEKSILKRRL 683 +++ R L Sbjct: 294 TARALWDRPL 303
>AK072675:Os08g0559400 | Length = 164 Score = 37.4 bits (85), Expect = 0.018 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +3 Query: 465 ILLGDAPHLDGQYAVFGRVTKGDDTLRKLERLPTHKEGIFVMPIERIEILSTYYYD 632 I L LDG++ +FGRV+KG + +++L + T K PI ++IL T D Sbjct: 112 ITLAPCQSLDGKHTIFGRVSKGMEIVKRLGSVQTDKSD---RPIHEVKILRTVVKD 164
>AB067654:Os08g0559400 | Length = 164 Score = 37.4 bits (85), Expect = 0.018 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +3 Query: 465 ILLGDAPHLDGQYAVFGRVTKGDDTLRKLERLPTHKEGIFVMPIERIEILSTYYYD 632 I L LDG++ +FGRV+KG + +++L + T K PI ++IL T D Sbjct: 112 ITLAPCQSLDGKHTIFGRVSKGMEIVKRLGSVQTDKSD---RPIHEVKILRTVVKD 164
>AK068112:Os06g0216800 | Length = 396 Score = 36.6 bits (83), Expect = 0.031 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +3 Query: 483 PHLDGQYAVFGRVTKGDDTLRKLERLP 563 PHLDG++ VFGRV KG +R +E P Sbjct: 150 PHLDGKHVVFGRVIKGMGVVRSVEHAP 176
>AK065672:Os01g0111100 | Length = 297 Score = 36.2 bits (82), Expect = 0.040 Identities = 18/37 (48%), Positives = 21/37 (56%) Frame = +3 Query: 465 ILLGDAPHLDGQYAVFGRVTKGDDTLRKLERLPTHKE 575 I GDAP LD V GRV G D L K+ +PT K+ Sbjct: 215 ITTGDAPELDASALVVGRVVDGMDVLGKIAAVPTVKD 251
>AB110199:Os08g0557500 | Length = 181 Score = 36.2 bits (82), Expect = 0.040 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +2 Query: 152 VVFQLNHGDIEFGFFPHVAPKTVEHIFKLVQLGCYNTNHFFRVDKGFVAQ 301 +V + GDI +P PKTVE+ + G Y+ F RV KGF+ Q Sbjct: 28 LVMHTSMGDIHLRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQ 77
>AK111941:Os08g0557500 | Length = 423 Score = 36.2 bits (82), Expect = 0.040 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +2 Query: 152 VVFQLNHGDIEFGFFPHVAPKTVEHIFKLVQLGCYNTNHFFRVDKGFVAQ 301 +V + GDI +P PKTVE+ + G Y+ F RV KGF+ Q Sbjct: 270 LVMHTSMGDIHLRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQ 319
>AK111654:Os08g0557500 | Length = 154 Score = 36.2 bits (82), Expect = 0.040 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +2 Query: 152 VVFQLNHGDIEFGFFPHVAPKTVEHIFKLVQLGCYNTNHFFRVDKGFVAQ 301 +V + GDI +P PKTVE+ + G Y+ F RV KGF+ Q Sbjct: 1 MVMHTSMGDIHLRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQ 50
>AK070404:Os02g0761100 | Length = 403 Score = 35.0 bits (79), Expect = 0.089 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +3 Query: 483 PHLDGQYAVFGRVTKGDDTLRKLERL 560 PHLDG++ VFGRV KG +R +E + Sbjct: 157 PHLDGKHVVFGRVIKGMGVVRSMEHV 182
>AK099323:Os06g0670500 | Length = 564 Score = 34.3 bits (77), Expect = 0.15 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = +3 Query: 468 LLGDAPHLDGQYAVFGRVTKGDDTLRKLERLPTHKEGIFVMPIERIEILSTYYYD 632 L D +LD ++ VFG V +G DTL K+ +G P + I I TY D Sbjct: 112 LRDDVDYLDDKHTVFGMVAEGFDTLTKISETYVDDKG---RPFKDIRIKHTYVLD 163
>AK072223:Os06g0670500 | Length = 564 Score = 34.3 bits (77), Expect = 0.15 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = +3 Query: 468 LLGDAPHLDGQYAVFGRVTKGDDTLRKLERLPTHKEGIFVMPIERIEILSTYYYD 632 L D +LD ++ VFG V +G DTL K+ +G P + I I TY D Sbjct: 112 LRDDVDYLDDKHTVFGMVAEGFDTLTKISETYVDDKG---RPFKDIRIKHTYVLD 163
>AK058898:Os10g0154700 | Length = 181 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 465 ILLGDAPHLDGQYAVFGRVTKGDDTLRKLERLPT 566 I + AP LDG++ FGRV G +R ++R T Sbjct: 131 ITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGT 164
>D29701:Os02g0121300 | Length = 89 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = +3 Query: 489 LDGQYAVFGRVTKGDDTLRKLERL 560 LDG++ VFGRV +G D ++ +E++ Sbjct: 46 LDGKHVVFGRVVEGMDVVKAIEKV 69
>L29470:Os02g0121300 | Length = 172 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = +3 Query: 489 LDGQYAVFGRVTKGDDTLRKLERL 560 LDG++ VFGRV +G D ++ +E++ Sbjct: 129 LDGKHVVFGRVVEGMDVVKAIEKV 152
>AK098919:Os02g0121300 | Length = 172 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = +3 Query: 489 LDGQYAVFGRVTKGDDTLRKLERL 560 LDG++ VFGRV +G D ++ +E++ Sbjct: 129 LDGKHVVFGRVVEGMDVVKAIEKV 152
>AK061894:Os02g0121300 | Length = 172 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = +3 Query: 489 LDGQYAVFGRVTKGDDTLRKLERL 560 LDG++ VFGRV +G D ++ +E++ Sbjct: 129 LDGKHVVFGRVVEGMDVVKAIEKV 152
>AF263544:Os02g0121300 | Length = 172 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = +3 Query: 489 LDGQYAVFGRVTKGDDTLRKLERL 560 LDG++ VFGRV +G D ++ +E++ Sbjct: 129 LDGKHVVFGRVVEGMDVVKAIEKV 152
>AK099874:Os08g0382400 | Length = 426 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +3 Query: 489 LDGQYAVFGRVTKGDDTLRKLE 554 LDG+YAVFG VT+ +D L L+ Sbjct: 379 LDGRYAVFGYVTENEDYLADLK 400
>AK058264:Os08g0382400 | Length = 73 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +3 Query: 489 LDGQYAVFGRVTKGDDTLRKLE 554 LDG+YAVFG VT+ +D L L+ Sbjct: 26 LDGRYAVFGYVTENEDYLADLK 47
>AK119201:Os05g0103200 | Length = 250 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 483 PHLDGQYAVFGRVTKGDDTLRKLERLPTHK 572 P LDG++ VFG+V +G D ++ +E T + Sbjct: 202 PWLDGRHVVFGQVIEGMDIVKMIESQETDR 231
>AK104772:Os05g0103200 | Length = 250 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 483 PHLDGQYAVFGRVTKGDDTLRKLERLPTHK 572 P LDG++ VFG+V +G D ++ +E T + Sbjct: 202 PWLDGRHVVFGQVIEGMDIVKMIESQETDR 231
>AK104627:Os05g0103200 | Length = 250 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 483 PHLDGQYAVFGRVTKGDDTLRKLERLPTHK 572 P LDG++ VFG+V +G D ++ +E T + Sbjct: 202 PWLDGRHVVFGQVIEGMDIVKMIESQETDR 231
>AK104478:Os05g0103200 | Length = 250 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 483 PHLDGQYAVFGRVTKGDDTLRKLERLPTHK 572 P LDG++ VFG+V +G D ++ +E T + Sbjct: 202 PWLDGRHVVFGQVIEGMDIVKMIESQETDR 231
>AK104195:Os05g0103200 | Length = 250 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 483 PHLDGQYAVFGRVTKGDDTLRKLERLPTHK 572 P LDG++ VFG+V +G D ++ +E T + Sbjct: 202 PWLDGRHVVFGQVIEGMDIVKMIESQETDR 231
>AK061557:Os05g0103200 | Length = 250 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 483 PHLDGQYAVFGRVTKGDDTLRKLERLPTHK 572 P LDG++ VFG+V +G D ++ +E T + Sbjct: 202 PWLDGRHVVFGQVIEGMDIVKMIESQETDR 231
>Os06g0708400:Os06g0708400 | Length = 208 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 408 GILSMGRYXXXXXXXXXXXILLGDAPHLDGQYAVFGRVTKGDDTLRKLE 554 G+LSM Y I LDG++ VFG+V G D + K+E Sbjct: 139 GLLSMANYAKDTNGSQFF-ITTVKLTRLDGKHVVFGKVLSGMDVVYKIE 186 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 28,510,742 Number of extensions: 615490 Number of successful extensions: 1398 Number of sequences better than 10.0: 32 Number of HSP's gapped: 1398 Number of HSP's successfully gapped: 37 Length of query: 354 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 252 Effective length of database: 11,315,673 Effective search space: 2851549596 Effective search space used: 2851549596 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
