>LOC_Os11g38990:12011.t03442:unspliced-genomic peptidyl-prolyl cis-trans isomerase A precursor, putative, expressed|
Length = 4999
Score = 97.7 bits (207), Expect(6) = 1e-70
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +2 / +2
Query: 161 QLNHGDIEFGFFPHVAPKTVEHIFKLVQLGCYNTNHFFRV 280
Q HGDIEFGFFPHVAPKTVEHI+KLV+LGCYNTNHFFRV
Sbjct: 1010 QTTHGDIEFGFFPHVAPKTVEHIYKLVRLGCYNTNHFFRV 1129
Score = 79.0 bits (166), Expect(6) = 1e-70
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3 / +3
Query: 306 ADVMGGRKARMNKEQEQQAEKSIVGEFSTFKHVRGILSMGRY 431
A V+GGR A MN EQ+++AEKS+VGEFST KHVRGILSMGRY
Sbjct: 1239 ASVVGGRTAPMNDEQQEEAEKSVVGEFSTVKHVRGILSMGRY 1364
Score = 69.8 bits (146), Expect(6) = 1e-70
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +3 / +2
Query: 498 QYAVFGRVTKGDDTLRKLERLPTHKEGIFVMPIERIEILSTYYYDIDVE 644
QYAVFGR+TKGDDTLRKLE+LPT +EGIFVM R + + ++ + ++
Sbjct: 1874 QYAVFGRLTKGDDTLRKLEQLPTRREGIFVMVCIRPPAMYSIFFYVGIK 2020
Score = 66.6 bits (139), Expect(6) = 1e-70
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +3 / +3
Query: 624 YYDIDVESCEAEKSILKRRLSESASEVERWRR 719
Y D+D+ESCEAEKSIL+RRLSESASEVERW R
Sbjct: 3141 YADVDLESCEAEKSILRRRLSESASEVERWVR 3236
Score = 35.0 bits (70), Expect(6) = 1e-70
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2 / +2
Query: 128 DPNLGSARVVFQLNH 172
DPNLGSARVVFQ+ H
Sbjct: 176 DPNLGSARVVFQVRH 220
Score = 32.2 bits (64), Expect(6) = 1e-70
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 465 ILLGDAPHLDGQ 500
ILLGDAPHLDGQ
Sbjct: 1761 ILLGDAPHLDGQ 1796
Score = 74.4 bits (156), Expect(7) = 9e-52
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -2 / -2
Query: 279 TRKK*FVL*HPSCTSLKMCSTVLGAT*GKKPNSISP* 169
TRKK*FVL*HPS TSL MCSTVLGAT*GKKPNS+SP*
Sbjct: 1128 TRKK*FVL*HPSLTSL*MCSTVLGAT*GKKPNSMSP* 1018
Score = 55.6 bits (115), Expect(7) = 9e-52
Identities = 25/32 (78%), Positives = 25/32 (78%)
Frame = -3 / -3
Query: 719 SSPSLNF*C*FRKSPLKNRLLCFTTLYINIVI 624
S PSLNF*C*FRKSP KN L CFT L INI I
Sbjct: 3236 SHPSLNF*C*FRKSPPKNGLFCFTAL*INICI 3141
Score = 55.1 bits (114), Expect(7) = 9e-52
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -1 / -2
Query: 589 ITKMPSLWVGRRSSFLNVSSPLVTLPNTAY* 497
IT MPSL VG SSFLNVSSP V+LPNTAY*
Sbjct: 1965 ITNMPSLRVGSCSSFLNVSSPFVSLPNTAY* 1873
Score = 51.5 bits (106), Expect(7) = 9e-52
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = -2 / -2
Query: 432 NTFPLKEFL*HA*KY*IHQQLISLPVVPALYSYGLFYLP*HRQTCATKP 286
NTFP E *HA*+Y*IHQQ ISL + A +S+G FY P +Q P
Sbjct: 1365 NTFPWTESP*HA*QY*IHQQPISLLPLAAHHSWGQFYHPQQKQLVQQNP 1219
Score = 40.9 bits (83), Expect(7) = 9e-52
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1 / -1
Query: 496 PSRWGASPRRIEKEEEALSGSEYL 425
PSR GASPRR+EKEE L GSE L
Sbjct: 1792 PSRCGASPRRMEKEEPPLFGSECL 1721
Score = 31.8 bits (63), Expect(7) = 9e-52
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 162 WKTTRADPRLGS 127
WKTTRADPR GS
Sbjct: 210 WKTTRADPRFGS 175
Score = 24.9 bits (48), Expect(7) = 9e-52
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 303 TCATKPLST 277
TCATKPLST
Sbjct: 1237 TCATKPLST 1211
Score = 68.0 bits (142), Expect(7) = 2e-43
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 169 SW*Y*VRLLSSCCT*DS*THF*TCAAWMLQYKSLLPG 279
SW*+*V LLSSCC+*DS*TH TC AW+LQ+KSL PG
Sbjct: 1018 SW*H*VWLLSSCCS*DS*THLQTCEAWVLQHKSLFPG 1128
Score = 61.6 bits (128), Expect(7) = 2e-43
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +2 / +2
Query: 284 KGFVAQVCRCHGR*KSPYE*RAGTTGREINCW*I*YFQACQRNSFNGKVF 433
+GF C C G * P+E* A REI CW*I*Y QACQ +S +GKVF
Sbjct: 1217 QGFCCTSCFCCGW*NCPHE**AARGSREIGCW*I*YCQACQGDSVHGKVF 1366
Score = 54.2 bits (112), Expect(7) = 2e-43
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1 / +1
Query: 619 HTITILM*RVVKQRSLFLRGDFLNQHQKLRDGDEN 723
+ + +L+*R VKQ+S FL GDFLNQHQKLRDG E+
Sbjct: 3136 YLMQMLI*RAVKQKSPFLGGDFLNQHQKLRDG*ES 3240
Score = 32.7 bits (65), Expect(7) = 2e-43
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 536 YIKKTRAPANP*RRHFCN 589
YIKKT A +N *RRH CN
Sbjct: 1912 YIKKT*ATSNS*RRHICN 1965
Score = 32.7 bits (65), Expect(7) = 2e-43
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 582 FVMPIERIEILSTYYY 629
+ PIERI ILSTYYY
Sbjct: 2312 YFQPIERISILSTYYY 2359
Score = 29.0 bits (57), Expect(7) = 2e-43
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 424 EGILIQTVPPLPFLSSLVMLPTLM 495
+G LIQTV LPF S L M TLM
Sbjct: 1720 QGTLIQTVVVLPFPSFLEMHHTLM 1791
Score = 27.2 bits (53), Expect(7) = 2e-43
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3 / +3
Query: 105 ALPLITPRIPTSDPPA 152
A P TPR TSDPPA
Sbjct: 153 APPASTPRTQTSDPPA 200
Score = 72.5 bits (152), Expect(6) = 8e-42
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = -1 / -1
Query: 277 PEEVICIVASKLHKFKNVFNCLRCNMRKEAELNITM 170
PE+VIC+VA K HKF NVFNCLR NMRKEA+LN+TM
Sbjct: 1126 PEKVICVVAPKPHKFVNVFNCLRSNMRKEAKLNVTM 1019
Score = 49.6 bits (102), Expect(6) = 8e-42
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = -3 / -3
Query: 431 IPSH*KNSSDMLESTKFTNNXXXXXXXXXFIHTGFSTSHDIGKL 300
IPSH +N DML+STKFTNN IH G ST+H+ L
Sbjct: 1364 IPSHGQNPPDMLDSTKFTNNRFLCFLLLLIIHGGSSTTHNRSNL 1233
Score = 47.8 bits (98), Expect(6) = 8e-42
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2 / -2
Query: 720 FVSISQLLMLIQKVSS*E*TSLLHNSLHQYRNSMS 616
F ISQLLMLIQKVSS*E T LLH+SL+Q+ + ++
Sbjct: 3237 FSPISQLLMLIQKVSS*EWTFLLHSSLNQHLHKIT 3133
Score = 46.9 bits (96), Expect(6) = 8e-42
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -3 / -1
Query: 593 WHYKNAFFMGWQAL*FS*CIVTLSHPPEYSILTI 492
+HYK AF W+ L FS*CI+T P +YSIL +
Sbjct: 1969 YHYKYAFSTSWKLLKFS*CIITFCEPSKYSILKL 1868
Score = 40.0 bits (81), Expect(6) = 8e-42
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3 / -3
Query: 500 LTIKVGSITKEDRKGRGGTVWIRIP 426
L+IKV I+K+D KGR TVWIR+P
Sbjct: 1796 LSIKVWCISKKDGKGRTTTVWIRVP 1722
Score = 24.0 bits (46), Expect(6) = 8e-42
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 163 LEDDAGGSE 137
LEDDAGGSE
Sbjct: 211 LEDDAGGSE 185
Score = 72.1 bits (151), Expect(3) = 2e-18
Identities = 33/66 (50%), Positives = 40/66 (60%)
Frame = -1 / -1
Query: 433 EYLPIERIPLTCLKVLNSPTIDFSACCSCSLFIRAFLPPMTSANLRYETLVNPEEVICIV 254
+YLP++RIPLTCL VLNSPT DFSA CS F+ A LPP T A + L + +
Sbjct: 1366 KYLPMDRIPLTCLTVLNSPTTDFSASSCCSSFMGAVLPPTTEATCATKPLST*TQSSTLY 1187
Query: 253 ASKLHK 236
KL K
Sbjct: 1186 IMKLTK 1169
Score = 41.4 bits (84), Expect(3) = 2e-18
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1 / -1
Query: 712 HLSTSDADSESLLLRIDF 659
HLSTSDADSESLLLR+DF
Sbjct: 3229 HLSTSDADSESLLLRMDF 3176
Score = 26.7 bits (52), Expect(3) = 2e-18
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2 / -3
Query: 570 YGLAGALVFLMYRHP*SPSRIQHTD 496
Y L A VFLMY H +IQHT+
Sbjct: 1946 YELEVAQVFLMYHHLL*AFQIQHTE 1872
Score = 48.7 bits (100), Expect(5) = 5e-17
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 620 ILLRY*CREL*SREVYS*EETF*ISIRS*EMETKML 727
IL R * REL*SR+V+S*EETF*ISIRS*EM ++
Sbjct: 3137 ILCRC*FREL*SRKVHS*EETF*ISIRS*EMGENLM 3244
Score = 43.7 bits (89), Expect(5) = 5e-17
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +3 / +3
Query: 195 FLMLHLRQLNTFLNLCSLDATIQITSSG 278
FLML LRQLNTF NL L AT QIT SG
Sbjct: 1044 FLMLLLRQLNTFTNL*GLGATTQITFSG 1127
Score = 32.2 bits (64), Expect(5) = 5e-17
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1 / +3
Query: 499 SMLYSGG*LRVTIH*EN*SACQPIKKAFL* 588
SMLY G +V IH*EN S Q ++KA+L*
Sbjct: 1875 SMLYLEGSQKVMIH*ENLSNFQLVEKAYL* 1964
Score = 25.8 bits (50), Expect(5) = 5e-17
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 133 QPRIRPRRLP 162
+PRIRPRRLP
Sbjct: 181 KPRIRPRRLP 210
Score = 24.4 bits (47), Expect(5) = 5e-17
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 275 RVDKGFVAQVCRCHGR*KSP 334
+VDKGFVAQV G +P
Sbjct: 1209 QVDKGFVAQVASVVGGRTAP 1268
Score = 70.7 bits (148), Expect = 2e-11
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -3 / -3
Query: 278 PGRSDLYCSIQAAQV*KCVQLS*VQHEERSRTQYHHDLT 162
PG+SDL CS QA+QV KCVQLS* QHEERS+TQ HH+L+
Sbjct: 1127 PGKSDLCCSTQASQVCKCVQLS*EQHEERSQTQCHHELS 1011
>LOC_Os04g03220:12004.t00212:unspliced-genomic hypothetical protein|
Length = 1741
Score = 31.8 bits (63), Expect = 8.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1 / +1
Query: 262 CIVASKLHKFKNVFNCLRCNMRKEA 188
CI + + K K+ NC+RC R+EA
Sbjct: 1264 CICFNPVFKAKDCLNCVRCKTRREA 1338
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 406,814,422
Number of extensions: 6438484
Number of successful extensions: 20965
Number of sequences better than 10.0: 24
Length of query: 354
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 304
Effective length of database: 52,799,986
Effective search space: 16051195744
Effective search space used: 16051195744
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)