ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf62p15 |
|---|---|
| Clone Library Name | barley_pub |
>Q9PA87:RPOC_XYLFA DNA-directed RNA polymerase beta' chain - Xylella fastidiosa| Length = 1407 Score = 40.0 bits (92), Expect = 0.030 Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGLVK-ESSDLRNKAQFVWANQE--DDAEETSMADALYEVLSVLHLMAMVCFL 629 E Y+ GL E L + Q++ A QE DD + T A+A+YE+L ++ L + + L Sbjct: 142 EAYVVTEPGLTPLERRQLLTEEQYLQARQEHADDFDATMGAEAVYELLRMIDLQSEMARL 201 Query: 630 QANSLLLPRSYGDGHGPRVSEESRRAT-VDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 + ++ G ++ ++R ++ F+++ + + VLP +PP+ R +P+ Sbjct: 202 REEIVVT------GSETKLKRLTKRIKLIEAFIESGNRPEWMILTVLPVLPPDLRPLVPL 255 Query: 807 D 809 D Sbjct: 256 D 256
>Q87A33:RPOC_XYLFT DNA-directed RNA polymerase beta' chain - Xylella fastidiosa| (strain Temecula1 / ATCC 700964) Length = 1407 Score = 38.5 bits (88), Expect = 0.087 Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGLVK-ESSDLRNKAQFVWANQE--DDAEETSMADALYEVLSVLHLMAMVCFL 629 E Y+ GL E L + Q++ A QE DD + + A+A+YE+L ++ L + + L Sbjct: 142 EAYVVTEPGLTPLERRQLLTEEQYLQARQEHADDFDASMGAEAVYELLRMIDLQSEMARL 201 Query: 630 QANSLLLPRSYGDGHGPRVSEESRRAT-VDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 + ++ G ++ ++R ++ F+++ + + VLP +PP+ R +P+ Sbjct: 202 REEIVVT------GSETKLKRLTKRIKLIEAFIESGNRPEWMILTVLPVLPPDLRPLVPL 255 Query: 807 D 809 D Sbjct: 256 D 256
>Q8KTH8:RPOC_XANOR DNA-directed RNA polymerase beta' chain - Xanthomonas oryzae pv.| oryzae Length = 1405 Score = 37.7 bits (86), Expect = 0.15 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGLVK-ESSDLRNKAQFVWANQE--DDAEETSMADALYEVLSVLHLMAMVCFL 629 E Y+ GL E L + Q++ A QE DD + A+A+YE+L + L + + L Sbjct: 142 EAYVVTEPGLTPLERRQLLTEEQYLTARQEYNDDFDAAMGAEAVYELLRTIDLQSEMTRL 201 Query: 630 QANSLLLPRSYGDGHGPRVSEESRRAT-VDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 + G ++ ++R ++ FL++ + V VLP +PP+ R +P+ Sbjct: 202 REEIA------STGSETKLKRLTKRIKLIEAFLESGNRPEWMVMTVLPVLPPDLRPLVPL 255 Query: 807 D 809 D Sbjct: 256 D 256
>Q2NZX9:RPOC_XANOM DNA-directed RNA polymerase beta' chain - Xanthomonas oryzae pv.| oryzae (strain MAFF 311018) Length = 1405 Score = 37.7 bits (86), Expect = 0.15 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGLVK-ESSDLRNKAQFVWANQE--DDAEETSMADALYEVLSVLHLMAMVCFL 629 E Y+ GL E L + Q++ A QE DD + A+A+YE+L + L + + L Sbjct: 142 EAYVVTEPGLTPLERRQLLTEEQYLTARQEYNDDFDAAMGAEAVYELLRTIDLQSEMTRL 201 Query: 630 QANSLLLPRSYGDGHGPRVSEESRRAT-VDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 + G ++ ++R ++ FL++ + V VLP +PP+ R +P+ Sbjct: 202 REEIA------STGSETKLKRLTKRIKLIEAFLESGNRPEWMVMTVLPVLPPDLRPLVPL 255 Query: 807 D 809 D Sbjct: 256 D 256
>Q8PC55:RPOC_XANCP DNA-directed RNA polymerase beta' chain - Xanthomonas campestris| pv. campestris Length = 1405 Score = 37.7 bits (86), Expect = 0.15 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGLVK-ESSDLRNKAQFVWANQE--DDAEETSMADALYEVLSVLHLMAMVCFL 629 E Y+ GL E L + Q++ A QE DD + A+A+YE+L + L + + L Sbjct: 142 EAYVVTEPGLTPLERRQLLTEEQYLTARQEYNDDFDAAMGAEAVYELLRTIDLQSEMTRL 201 Query: 630 QANSLLLPRSYGDGHGPRVSEESRRAT-VDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 + G ++ ++R ++ FL++ + V VLP +PP+ R +P+ Sbjct: 202 REEIA------STGSETKLKRLTKRIKLIEAFLESGNRPEWMVMTVLPVLPPDLRPLVPL 255 Query: 807 D 809 D Sbjct: 256 D 256
>Q4URD3:RPOC_XANC8 DNA-directed RNA polymerase beta' chain - Xanthomonas campestris| pv. campestris (strain 8004) Length = 1405 Score = 37.7 bits (86), Expect = 0.15 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGLVK-ESSDLRNKAQFVWANQE--DDAEETSMADALYEVLSVLHLMAMVCFL 629 E Y+ GL E L + Q++ A QE DD + A+A+YE+L + L + + L Sbjct: 142 EAYVVTEPGLTPLERRQLLTEEQYLTARQEYNDDFDAAMGAEAVYELLRTIDLQSEMTRL 201 Query: 630 QANSLLLPRSYGDGHGPRVSEESRRAT-VDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 + G ++ ++R ++ FL++ + V VLP +PP+ R +P+ Sbjct: 202 REEIA------STGSETKLKRLTKRIKLIEAFLESGNRPEWMVMTVLPVLPPDLRPLVPL 255 Query: 807 D 809 D Sbjct: 256 D 256
>Q3BWZ0:RPOC_XANC5 DNA-directed RNA polymerase beta' chain - Xanthomonas campestris| pv. vesicatoria (strain 85-10) Length = 1404 Score = 37.7 bits (86), Expect = 0.15 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGLVK-ESSDLRNKAQFVWANQE--DDAEETSMADALYEVLSVLHLMAMVCFL 629 E Y+ GL E L + Q++ A QE DD + A+A+YE+L + L + + L Sbjct: 142 EAYVVTEPGLTPLERRQLLTEEQYLTARQEYNDDFDAAMGAEAVYELLRTIDLQSEMTRL 201 Query: 630 QANSLLLPRSYGDGHGPRVSEESRRAT-VDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 + G ++ ++R ++ FL++ + V VLP +PP+ R +P+ Sbjct: 202 REEIA------STGSETKLKRLTKRIKLIEAFLESGNRPEWMVMTVLPVLPPDLRPLVPL 255 Query: 807 D 809 D Sbjct: 256 D 256
>Q8PNS9:RPOC_XANAC DNA-directed RNA polymerase beta' chain - Xanthomonas axonopodis| pv. citri Length = 1404 Score = 37.7 bits (86), Expect = 0.15 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGLVK-ESSDLRNKAQFVWANQE--DDAEETSMADALYEVLSVLHLMAMVCFL 629 E Y+ GL E L + Q++ A QE DD + A+A+YE+L + L + + L Sbjct: 142 EAYVVTEPGLTPLERRQLLTEEQYLTARQEYNDDFDAAMGAEAVYELLRTIDLQSEMTRL 201 Query: 630 QANSLLLPRSYGDGHGPRVSEESRRAT-VDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 + G ++ ++R ++ FL++ + V VLP +PP+ R +P+ Sbjct: 202 REEIA------STGSETKLKRLTKRIKLIEAFLESGNRPEWMVMTVLPVLPPDLRPLVPL 255 Query: 807 D 809 D Sbjct: 256 D 256
>P09029:PURK_ECOLI Phosphoribosylaminoimidazole carboxylase ATPase subunit -| Escherichia coli Length = 355 Score = 37.0 bits (84), Expect = 0.25 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Frame = +3 Query: 507 LRNKAQFVWANQEDDAEETSMADALYEVLSVLHLMAMVCFLQANSLLL----PRSYGDGH 674 LR F AN + A+ M A+ + L + +MAM CF+ LL+ PR + GH Sbjct: 189 LRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGH 248
>O33431:RPOC_PORCN DNA-directed RNA polymerase beta' chain - Porphyromonas| cangingivalis Length = 1159 Score = 36.2 bits (82), Expect = 0.43 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 7/124 (5%) Frame = +3 Query: 459 EEYLPVLLGLVKESSDLRNKAQFVWANQEDDAEETSMA----DALYEVLSVLHLMAMVCF 626 EEYL +L L + + DL EDDA E +A +A+Y++L + L + Sbjct: 88 EEYLDILDSLPEGNQDL-----------EDDAPEKFIAKIGAEAIYDLLCRVDLDKLSYE 136 Query: 627 LQANSLLLPRSYGDGHGPRVSEESRRA-TVDVFLKAAGYL--DCAVNQVLPQIPPEKRRA 797 L+A ++ D R E +R V+ F + GY + V +V+P IPPE Sbjct: 137 LRA------KASKDSSQQRKKEALKRLQVVESFRASEGYSRPEWMVMKVIPVIPPELHTL 190 Query: 798 LPVD 809 +P+D Sbjct: 191 VPLD 194
>Q6C1E4:PALC_YARLI pH-response regulator protein palC - Yarrowia lipolytica (Candida| lipolytica) Length = 441 Score = 35.4 bits (80), Expect = 0.74 Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 19/173 (10%) Frame = +3 Query: 378 ESAMALKPRRRT----ARHGGSGTAN-----LLQALEEYLPVLLGLVKESSDLRNKAQFV 530 E+A A + R R A+ G+ AN +++ALEEY+P + +V R +Q + Sbjct: 31 ENADAARARVREQLKHAKKTGATEANGDIMPVIKALEEYMPHITSIVDNEGVFRFTSQII 90 Query: 531 ------WANQEDDAEETSMADALYEVLSVLHLMAMVCFLQANSLLLPRSYGDGHGPRVSE 692 + +Q A +T + +E + VL A+ AN + R E Sbjct: 91 TCWRLPFQSQSSMANKTPLHGLSFEYIMVLFTYALALATLANQYV----------ARDKE 140 Query: 693 ESRRATVDVFLKAAGYLD----CAVNQVLPQIPPEKRRALPVDLVEGNLKALS 839 + + KA G +D C Q++ PP ++P DL + ALS Sbjct: 141 DRWKHASAYISKARGVVDYLRQCRSFQIICNEPP---ASVPRDLSSATMSALS 190
>P14780:MMP9_HUMAN Matrix metalloproteinase-9 precursor - Homo sapiens (Human)| Length = 707 Score = 34.7 bits (78), Expect = 1.3 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 4/45 (8%) Frame = -3 Query: 296 LREVYGPR-YPEPREEDDHLPDASRPPLAHDTGIP---PFRRPTA 174 +R +YGPR PEPR P + PP TG P P RPTA Sbjct: 439 IRHLYGPRPEPEPRPPTTTTPQPTAPPTVCPTGPPTVHPSERPTA 483
>O15320:CTGE5_HUMAN Cutaneous T-cell lymphoma-associated antigen 5 - Homo sapiens| (Human) Length = 804 Score = 34.7 bits (78), Expect = 1.3 Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 11/100 (11%) Frame = -2 Query: 753 LHNPSIQLLSRK---HQQWLAC--------SLRTLSAHGRRRMTSEEAGSWPAGSTPWPS 607 +H+ Q++S + H WLA LR +AH R+++T E P+ Sbjct: 446 IHSYQGQIISHEKKAHDNWLAARNAERNLNDLRKENAHNRQKLTETELKFELLEKDPYAL 505 Query: 606 GAAQTAPHTKHRPWTSPQRRPLGWPKQTALCFSDHCFLSP 487 TA +H P+ PLGWP FLSP Sbjct: 506 DVPNTAFGREHSPYGP---SPLGWPSS-----ETRAFLSP 537
>Q8XU30:MINC_RALSO Probable septum site-determining protein minC - Ralstonia| solanacearum (Pseudomonas solanacearum) Length = 255 Score = 33.1 bits (74), Expect = 3.7 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = -2 Query: 726 SRKHQQWL-ACSLRTLSAHGRR---RMTSEEAGSWPAGSTPWPSGAAQTAP 586 S + +W AC L L +HGRR + E A + PA + P P+ AA AP Sbjct: 86 SPEQAEWAQACGLPLLDSHGRRPRGERSEEAAEAVPAAAEPVPAPAASPAP 136
>P38904:SPP41_YEAST Protein SPP41 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1435 Score = 32.7 bits (73), Expect = 4.8 Identities = 19/60 (31%), Positives = 30/60 (50%) Frame = +3 Query: 1146 LKESKRAAEAFHSTPPTSRMSTPFGTTKYLLDMIPKETLSKLQDNQDLNTQERTSNTEIS 1325 L+ K + +A HS T+ ++T K L MIP S+++ D R++ TEIS Sbjct: 891 LQARKNSMQAAHSKGTTTELATTASRMKNPLKMIPIFNTSRVKQQLDKQLPARSAGTEIS 950
>Q9HWC9:RPOC_PSEAE DNA-directed RNA polymerase beta' chain - Pseudomonas aeruginosa| Length = 1399 Score = 32.7 bits (73), Expect = 4.8 Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 3/120 (2%) Frame = +3 Query: 459 EEYLPVLLGLVK-ESSDLRNKAQFVWANQE--DDAEETSMADALYEVLSVLHLMAMVCFL 629 E Y+ + G+ E L N Q+ A +E DD + A+A++E+L+ + L + L Sbjct: 142 ESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARMGAEAVHELLNAIDLEHEIGRL 201 Query: 630 QANSLLLPRSYGDGHGPRVSEESRRATVDVFLKAAGYLDCAVNQVLPQIPPEKRRALPVD 809 + +P++ + ++S+ R ++ F + + V VLP +PP+ R +P+D Sbjct: 202 REE---IPQTNSETKIKKLSK--RLKLMEAFQGSGNKPEWMVLTVLPVLPPDLRPLVPLD 256
>Q0RBM4:SYP_FRAAA Prolyl-tRNA synthetase - Frankia alni (strain ACN14a)| Length = 468 Score = 32.3 bits (72), Expect = 6.3 Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 1/104 (0%) Frame = +3 Query: 693 ESRRATVDVFLKAAGYLDCAVNQVLPQIPPEKRRALPVDLVEGNLKALSLQGLGQGVDMQ 872 E +A VD +KAAG AVN P PE + VEG L++ +G G + Sbjct: 45 ERMQADVDARIKAAG----AVNAYFPLFIPESYLRREAEHVEGFSPELAVVTIGGGKE-- 98 Query: 873 LGLAIDNPKATLAVKRRLACEMVKYWQQIKDSIPELP-LLDGWA 1001 ++ P + E + W Q S +LP LL+ WA Sbjct: 99 ----LEEPVVVRPTSETIIGEYLAKWTQ---SYRDLPLLLNQWA 135
>Q8A470:RPOC_BACTN DNA-directed RNA polymerase beta' chain - Bacteroides| thetaiotaomicron Length = 1427 Score = 32.3 bits (72), Expect = 6.3 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%) Frame = +3 Query: 459 EEYLPVLLGLVKESSDLRNKAQFVWANQEDDAEETSMADALYEVLSVLHLMAMVCFLQAN 638 EEYL +L L K++ Q++ N + A+A+Y++L+ L L A+ L+ Sbjct: 162 EEYLDILDTLPKDN-------QYLEDNDPNKFIAKMGAEAIYDLLARLDLDALSYELRH- 213 Query: 639 SLLLPRSYGDGHGPRVSEESRRATVDVFLKAA---GYLDCAVNQVLPQIPPEKRRALPVD 809 R+ D R +E +R V +A+ + + +++P IPPE R +P+D Sbjct: 214 -----RAGNDASQQRKNEALKRLQVVESFRASRGRNKPEWMIVRIVPVIPPELRPLVPLD 268
>Q92QH6:RPOC_RHIME DNA-directed RNA polymerase beta' chain - Rhizobium meliloti| (Sinorhizobium meliloti) Length = 1401 Score = 32.0 bits (71), Expect = 8.2 Identities = 28/121 (23%), Positives = 63/121 (52%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGL--VKESSDLRNKAQFVWANQEDDAEETSM--ADALYEVLSVLHLMAMVCF 626 E Y+ GL +KE+ L + + ++ + + T+M A+A+YE+L+ ++L + Sbjct: 143 ENYIVTEPGLTSLKENQLLSEEEYMIAVDEFGEDQFTAMIGAEAIYEMLASMNLEKIAGD 202 Query: 627 LQANSLLLPRSYGDGHGPRVSEESRRATVDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 L++ + + D ++ + R V+ F+++ + + +V+P IPP+ R +P+ Sbjct: 203 LRSE---MAETTSDLKQKKLMK--RLKIVENFMESGNRPEWMIMKVVPVIPPDLRPLVPL 257 Query: 807 D 809 D Sbjct: 258 D 258
>Q8G070:RPOC_BRUSU DNA-directed RNA polymerase beta' chain - Brucella suis| Length = 1400 Score = 32.0 bits (71), Expect = 8.2 Identities = 28/121 (23%), Positives = 61/121 (50%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGL--VKESSDLRNKAQFVWANQEDDAEETSM--ADALYEVLSVLHLMAMVCF 626 E Y+ GL +KE L + + ++ + + T++ A+A+YE+L+ + L + Sbjct: 143 ENYIVTEPGLTSLKEHQLLSEEEYMIAVDEFGEDQFTALIGAEAIYELLASMELEKIAAD 202 Query: 627 LQANSLLLPRSYGDGHGPRVSEESRRATVDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 L+ + L + D ++ + R V+ FL++ + + +++P IPP+ R +P+ Sbjct: 203 LRVD---LAETTSDLKQKKLMK--RLKIVENFLESGNRPEWMIMKIVPVIPPDLRPLVPL 257 Query: 807 D 809 D Sbjct: 258 D 258
>Q8YHP7:RPOC_BRUME DNA-directed RNA polymerase beta' chain - Brucella melitensis| Length = 1400 Score = 32.0 bits (71), Expect = 8.2 Identities = 28/121 (23%), Positives = 61/121 (50%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGL--VKESSDLRNKAQFVWANQEDDAEETSM--ADALYEVLSVLHLMAMVCF 626 E Y+ GL +KE L + + ++ + + T++ A+A+YE+L+ + L + Sbjct: 143 ENYIVTEPGLTSLKEHQLLSEEEYMIAVDEFGEDQFTALIGAEAIYELLASMELEKIAAD 202 Query: 627 LQANSLLLPRSYGDGHGPRVSEESRRATVDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 L+ + L + D ++ + R V+ FL++ + + +++P IPP+ R +P+ Sbjct: 203 LRVD---LAETTSDLKQKKLMK--RLKIVENFLESGNRPEWMIMKIVPVIPPDLRPLVPL 257 Query: 807 D 809 D Sbjct: 258 D 258
>Q57CP9:RPOC_BRUAB DNA-directed RNA polymerase beta' chain - Brucella abortus| Length = 1400 Score = 32.0 bits (71), Expect = 8.2 Identities = 28/121 (23%), Positives = 61/121 (50%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGL--VKESSDLRNKAQFVWANQEDDAEETSM--ADALYEVLSVLHLMAMVCF 626 E Y+ GL +KE L + + ++ + + T++ A+A+YE+L+ + L + Sbjct: 143 ENYIVTEPGLTSLKEHQLLSEEEYMIAVDEFGEDQFTALIGAEAIYELLASMELEKIAAD 202 Query: 627 LQANSLLLPRSYGDGHGPRVSEESRRATVDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 L+ + L + D ++ + R V+ FL++ + + +++P IPP+ R +P+ Sbjct: 203 LRVD---LAETTSDLKQKKLMK--RLKIVENFLESGNRPEWMIMKIVPVIPPDLRPLVPL 257 Query: 807 D 809 D Sbjct: 258 D 258
>Q2YM16:RPOC_BRUA2 DNA-directed RNA polymerase beta' chain - Brucella abortus (strain| 2308) Length = 1400 Score = 32.0 bits (71), Expect = 8.2 Identities = 28/121 (23%), Positives = 61/121 (50%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGL--VKESSDLRNKAQFVWANQEDDAEETSM--ADALYEVLSVLHLMAMVCF 626 E Y+ GL +KE L + + ++ + + T++ A+A+YE+L+ + L + Sbjct: 143 ENYIVTEPGLTSLKEHQLLSEEEYMIAVDEFGEDQFTALIGAEAIYELLASMELEKIAAD 202 Query: 627 LQANSLLLPRSYGDGHGPRVSEESRRATVDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 L+ + L + D ++ + R V+ FL++ + + +++P IPP+ R +P+ Sbjct: 203 LRVD---LAETTSDLKQKKLMK--RLKIVENFLESGNRPEWMIMKIVPVIPPDLRPLVPL 257 Query: 807 D 809 D Sbjct: 258 D 258
>Q8UE09:RPOC_AGRT5 DNA-directed RNA polymerase beta' chain - Agrobacterium tumefaciens| (strain C58 / ATCC 33970) Length = 1402 Score = 32.0 bits (71), Expect = 8.2 Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 4/121 (3%) Frame = +3 Query: 459 EEYLPVLLGL--VKESSDLRNKAQFVWANQEDDAEETSM--ADALYEVLSVLHLMAMVCF 626 E Y+ GL +K++ L + + ++ + + T+M A+A+YE+L+ ++L + Sbjct: 143 ENYIVTEPGLTSLKQNQLLSEEEYMIAVDEFGEDQFTAMIGAEAIYEMLASMNLEKIAGD 202 Query: 627 LQANSLLLPRSYGDGHGPRVSEESRRATVDVFLKAAGYLDCAVNQVLPQIPPEKRRALPV 806 L+A L + D + + R V+ F+++ + + +V+P IPP+ R +P+ Sbjct: 203 LRAE---LAETTSDLKQKKFMK--RLKIVENFMESGNRPEWMIMKVVPVIPPDLRPLVPL 257 Query: 807 D 809 D Sbjct: 258 D 258
>Q68RJ9:CART_BOVIN Cocaine- and amphetamine-regulated transcript protein precursor| [Contains: CART(1-39); CART(42-89)] - Bos taurus (Bovine) Length = 116 Score = 32.0 bits (71), Expect = 8.2 Identities = 18/50 (36%), Positives = 30/50 (60%) Frame = +3 Query: 453 ALEEYLPVLLGLVKESSDLRNKAQFVWANQEDDAEETSMADALYEVLSVL 602 AL LP+L L +E ++L+ +A +++ ED + E + +AL EVL L Sbjct: 15 ALLLLLPLLGALAQEDAELQPRALDIYSAVEDASHEKELIEALQEVLKKL 64
>Q21184:CO155_CAEEL Putative cuticle collagen 155 - Caenorhabditis elegans| Length = 266 Score = 32.0 bits (71), Expect = 8.2 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +2 Query: 308 SPGQDRRRQTVGSKGNSRDNGNAGIGHGPEAEAEDGAARRVWHC*PSP 451 SPGQD + G+KG S NGN G P +D + + P P Sbjct: 140 SPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGP 187 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 304,345,655 Number of extensions: 6781795 Number of successful extensions: 20503 Number of sequences better than 10.0: 26 Number of HSP's gapped: 20484 Number of HSP's successfully gapped: 26 Length of query: 571 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 452 Effective length of database: 68,045,334 Effective search space: 30756490968 Effective search space used: 30756490968 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
