| Clone Name | FLbaf62p15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059902.1| Oryza sativa (japonica cultivar-group) Os04g0527400 (Os04g0527400) mRNA, complete cds Length = 2439 Score = 347 bits (175), Expect = 8e-92 Identities = 637/791 (80%) Strand = Plus / Plus Query: 433 gcactgctaaccttctccaggctttggaagagtacctgccagttctgctaggactggtga 492 |||||||||| || || |||||| ||||||| || |||||||| ||||||||| |||||| Sbjct: 814 gcactgctaatctcctacaggctctggaagactatctgccagtgctgctaggattggtga 873 Query: 493 aagaaagcagtgatctgagaaacaaagcgcagtttgtttgggccaaccaagaggacgacg 552 | ||| | || || || | || || ||| || || ||| | ||||||||||| | | Sbjct: 874 aggaaggtagcgaattgcggcacggagtgcacttcgtctggactaaccaagaggataatg 933 Query: 553 ctgaggagacgtccatggccgatgctttgtatgaggtgctgtctgtgctgcacctgatgg 612 ||||||| ||| ||||||| ||||| | |||||| ||| |||| || ||||| |||||| Sbjct: 934 ctgaggaaacggccatggcagatgcatggtatgaagtgttgtccgttctgcatttgatgg 993 Query: 613 ccatggtgtgcttcctgcaggccaactccctgcttcttccgaggtcatacggcgacggcc 672 ||||||| ||||| |||||||||| || ||||||||||| ||||||||||| || || Sbjct: 994 ccatggtctgcttgttgcaggccaattctctgcttcttcccaggtcatacggtgatggtt 1053 Query: 673 atgggccgagagtgtccgaagagagcaggcgagccactgttgatgttttcttgaaagcag 732 ||| ||| || || || ||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 1054 atgcgccaagggtttctgaagagagcagacgagctactgttgatgttttcttgaaggcat 1113 Query: 733 ctggatacttggattgtgcagttaatcaagtacttccgcagataccgcctgaaaaaagaa 792 |||| ||| | || || ||| ||| |||||||| || || ||| || | || ||| | Sbjct: 1114 ctggctacctagactgcgcaattagacaagtactaccccaaatatcgtcggagttaagga 1173 Query: 793 gggcactcccagttgatctagttgagggaaatctaaaagctcttagcttgcaaggacttg 852 | ||| ||||| ||||| | ||| |||||||| |||||||||||| |||||| || | Sbjct: 1174 gacaacttccagtagatctggctgaaggaaatctcaaagctcttagcctgcaagctctgg 1233 Query: 853 gccagggagttgatatgcaacttggattggcaattgataatccaaaggccactttagcag 912 | |||||||| || ||||||||||| |||||||||||| |||||||||||| |||| | Sbjct: 1234 gtcagggagtcgacatgcaacttggtctggcaattgatagcccaaaggccactctagcgg 1293 Query: 913 tcaaaaggcgtttagcttgcgagatggtcaaatattggcagcagattaaggatagcatac 972 | ||| |||| ||||||||||||||||||||||||||||| || ||| |||| ||||| | Sbjct: 1294 taaaacggcgcttagcttgcgagatggtcaaatattggcatcaaattcaggagagcattc 1353 Query: 973 cggagcttcctttgctggatggatgggcgaaaaagcacacactatttgtcaagtggaagt 1032 | || |||| | |||||||||| ||||||||| | | ||||| |||||||||| Sbjct: 1354 cagaaattccggtatccgatggatgggggaaaaagcatttattgtttgttaagtggaagt 1413 Query: 1033 atgctgaagcaaaggctgctgcatattacttccatgggttgattcttgatgagggaaaca 1092 ||| ||||||||||||||| ||||| || |||||||| |||||||| || |||||||||| Sbjct: 1414 atgttgaagcaaaggctgcagcatactatttccatggtttgattctagacgagggaaaca 1473 Query: 1093 ccgagaaatcacaggagatggcaatatcatccctacaagcgtcagaggagtttctgaaag 1152 | |||||||| || | |||||| || | || | ||||| ||||| || |||||||||| Sbjct: 1474 cagagaaatctcatggaatggcagtagctgccttgcaagcttcagaagaatttctgaaag 1533 Query: 1153 agagcaaaagagccgctgaggccttccattcaactcctccgacatcaaggatgtcaactc 1212 | |||||||| || |||| ||||||||| |||||||||| |||||||||| | |||| Sbjct: 1534 aaagcaaaagggcttctgaagccttccatgcaactcctccaacatcaaggagccccactc 1593 Query: 1213 ctttcggaaca 1223 ||||||||||| Sbjct: 1594 ctttcggaaca 1604 Score = 75.8 bits (38), Expect = 5e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 231 agcgtcggggaggtggtcgtcttcctcccggggctccgggtaccgaggaccgtagacttc 290 |||||||| || |||||||| |||||||||||||||||||| ||||||| ||| |||||| Sbjct: 615 agcgtcggcgacgtggtcgtgttcctcccggggctccgggtgccgaggagcgtggacttc 674 Query: 291 tc 292 || Sbjct: 675 tc 676
>dbj|AK101489.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042F15, full insert sequence Length = 2076 Score = 347 bits (175), Expect = 8e-92 Identities = 637/791 (80%) Strand = Plus / Plus Query: 433 gcactgctaaccttctccaggctttggaagagtacctgccagttctgctaggactggtga 492 |||||||||| || || |||||| ||||||| || |||||||| ||||||||| |||||| Sbjct: 366 gcactgctaatctcctacaggctctggaagactatctgccagtgctgctaggattggtga 425 Query: 493 aagaaagcagtgatctgagaaacaaagcgcagtttgtttgggccaaccaagaggacgacg 552 | ||| | || || || | || || ||| || || ||| | ||||||||||| | | Sbjct: 426 aggaaggtagcgaattgcggcacggagtgcacttcgtctggactaaccaagaggataatg 485 Query: 553 ctgaggagacgtccatggccgatgctttgtatgaggtgctgtctgtgctgcacctgatgg 612 ||||||| ||| ||||||| ||||| | |||||| ||| |||| || ||||| |||||| Sbjct: 486 ctgaggaaacggccatggcagatgcatggtatgaagtgttgtccgttctgcatttgatgg 545 Query: 613 ccatggtgtgcttcctgcaggccaactccctgcttcttccgaggtcatacggcgacggcc 672 ||||||| ||||| |||||||||| || ||||||||||| ||||||||||| || || Sbjct: 546 ccatggtctgcttgttgcaggccaattctctgcttcttcccaggtcatacggtgatggtt 605 Query: 673 atgggccgagagtgtccgaagagagcaggcgagccactgttgatgttttcttgaaagcag 732 ||| ||| || || || ||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 606 atgcgccaagggtttctgaagagagcagacgagctactgttgatgttttcttgaaggcat 665 Query: 733 ctggatacttggattgtgcagttaatcaagtacttccgcagataccgcctgaaaaaagaa 792 |||| ||| | || || ||| ||| |||||||| || || ||| || | || ||| | Sbjct: 666 ctggctacctagactgcgcaattagacaagtactaccccaaatatcgtcggagttaagga 725 Query: 793 gggcactcccagttgatctagttgagggaaatctaaaagctcttagcttgcaaggacttg 852 | ||| ||||| ||||| | ||| |||||||| |||||||||||| |||||| || | Sbjct: 726 gacaacttccagtagatctggctgaaggaaatctcaaagctcttagcctgcaagctctgg 785 Query: 853 gccagggagttgatatgcaacttggattggcaattgataatccaaaggccactttagcag 912 | |||||||| || ||||||||||| |||||||||||| |||||||||||| |||| | Sbjct: 786 gtcagggagtcgacatgcaacttggtctggcaattgatagcccaaaggccactctagcgg 845 Query: 913 tcaaaaggcgtttagcttgcgagatggtcaaatattggcagcagattaaggatagcatac 972 | ||| |||| ||||||||||||||||||||||||||||| || ||| |||| ||||| | Sbjct: 846 taaaacggcgcttagcttgcgagatggtcaaatattggcatcaaattcaggagagcattc 905 Query: 973 cggagcttcctttgctggatggatgggcgaaaaagcacacactatttgtcaagtggaagt 1032 | || |||| | |||||||||| ||||||||| | | ||||| |||||||||| Sbjct: 906 cagaaattccggtatccgatggatgggggaaaaagcatttattgtttgttaagtggaagt 965 Query: 1033 atgctgaagcaaaggctgctgcatattacttccatgggttgattcttgatgagggaaaca 1092 ||| ||||||||||||||| ||||| || |||||||| |||||||| || |||||||||| Sbjct: 966 atgttgaagcaaaggctgcagcatactatttccatggtttgattctagacgagggaaaca 1025 Query: 1093 ccgagaaatcacaggagatggcaatatcatccctacaagcgtcagaggagtttctgaaag 1152 | |||||||| || | |||||| || | || | ||||| ||||| || |||||||||| Sbjct: 1026 cagagaaatctcatggaatggcagtagctgccttgcaagcttcagaagaatttctgaaag 1085 Query: 1153 agagcaaaagagccgctgaggccttccattcaactcctccgacatcaaggatgtcaactc 1212 | |||||||| || |||| ||||||||| |||||||||| |||||||||| | |||| Sbjct: 1086 aaagcaaaagggcttctgaagccttccatgcaactcctccaacatcaaggagccccactc 1145 Query: 1213 ctttcggaaca 1223 ||||||||||| Sbjct: 1146 ctttcggaaca 1156 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 231 agcgtcggggaggtggtcgtcttcctcccggggctccgggtaccgaggaccgtagacttc 290 |||||||| || |||||||| |||||||||||||||||||| ||||||| ||| || ||| Sbjct: 167 agcgtcggcgacgtggtcgtgttcctcccggggctccgggtgccgaggagcgtggatttc 226 Query: 291 tc 292 || Sbjct: 227 tc 228
>dbj|AK060860.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F09, full insert sequence Length = 1667 Score = 347 bits (175), Expect = 8e-92 Identities = 637/791 (80%) Strand = Plus / Plus Query: 433 gcactgctaaccttctccaggctttggaagagtacctgccagttctgctaggactggtga 492 |||||||||| || || |||||| ||||||| || |||||||| ||||||||| |||||| Sbjct: 450 gcactgctaatctcctacaggctctggaagactatctgccagtgctgctaggattggtga 509 Query: 493 aagaaagcagtgatctgagaaacaaagcgcagtttgtttgggccaaccaagaggacgacg 552 | ||| | || || || | || || ||| || || ||| | ||||||||||| | | Sbjct: 510 aggaaggtagcgaattgcggcacggagtgcacttcgtctggactaaccaagaggataatg 569 Query: 553 ctgaggagacgtccatggccgatgctttgtatgaggtgctgtctgtgctgcacctgatgg 612 ||||||| ||| ||||||| ||||| | |||||| ||| |||| || ||||| |||||| Sbjct: 570 ctgaggaaacggccatggcagatgcatggtatgaagtgttgtccgttctgcatttgatgg 629 Query: 613 ccatggtgtgcttcctgcaggccaactccctgcttcttccgaggtcatacggcgacggcc 672 ||||||| ||||| |||||||||| || ||||||||||| ||||||||||| || || Sbjct: 630 ccatggtctgcttgttgcaggccaattctctgcttcttcccaggtcatacggtgatggtt 689 Query: 673 atgggccgagagtgtccgaagagagcaggcgagccactgttgatgttttcttgaaagcag 732 ||| ||| || || || ||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 690 atgcgccaagggtttctgaagagagcagacgagctactgttgatgttttcttgaaggcat 749 Query: 733 ctggatacttggattgtgcagttaatcaagtacttccgcagataccgcctgaaaaaagaa 792 |||| ||| | || || ||| ||| |||||||| || || ||| || | || ||| | Sbjct: 750 ctggctacctagactgcgcaattagacaagtactaccccaaatatcgtcggagttaagga 809 Query: 793 gggcactcccagttgatctagttgagggaaatctaaaagctcttagcttgcaaggacttg 852 | ||| ||||| ||||| | ||| |||||||| |||||||||||| |||||| || | Sbjct: 810 gacaacttccagtagatctggctgaaggaaatctcaaagctcttagcctgcaagctctgg 869 Query: 853 gccagggagttgatatgcaacttggattggcaattgataatccaaaggccactttagcag 912 | |||||||| || ||||||||||| |||||||||||| |||||||||||| |||| | Sbjct: 870 gtcagggagtcgacatgcaacttggtctggcaattgatagcccaaaggccactctagcgg 929 Query: 913 tcaaaaggcgtttagcttgcgagatggtcaaatattggcagcagattaaggatagcatac 972 | ||| |||| ||||||||||||||||||||||||||||| || ||| |||| ||||| | Sbjct: 930 taaaacggcgcttagcttgcgagatggtcaaatattggcatcaaattcaggagagcattc 989 Query: 973 cggagcttcctttgctggatggatgggcgaaaaagcacacactatttgtcaagtggaagt 1032 | || |||| | |||||||||| ||||||||| | | ||||| |||||||||| Sbjct: 990 cagaaattccggtatccgatggatgggggaaaaagcatttattgtttgttaagtggaagt 1049 Query: 1033 atgctgaagcaaaggctgctgcatattacttccatgggttgattcttgatgagggaaaca 1092 ||| ||||||||||||||| ||||| || |||||||| |||||||| || |||||||||| Sbjct: 1050 atgttgaagcaaaggctgcagcatactatttccatggtttgattctagacgagggaaaca 1109 Query: 1093 ccgagaaatcacaggagatggcaatatcatccctacaagcgtcagaggagtttctgaaag 1152 | |||||||| || | |||||| || | || | ||||| ||||| || |||||||||| Sbjct: 1110 cagagaaatctcatggaatggcagtagctgccttgcaagcttcagaagaatttctgaaag 1169 Query: 1153 agagcaaaagagccgctgaggccttccattcaactcctccgacatcaaggatgtcaactc 1212 | |||||||| || |||| ||||||||| |||||||||| |||||||||| | |||| Sbjct: 1170 aaagcaaaagggcttctgaagccttccatgcaactcctccaacatcaaggagccccactc 1229 Query: 1213 ctttcggaaca 1223 ||||||||||| Sbjct: 1230 ctttcggaaca 1240 Score = 75.8 bits (38), Expect = 5e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 231 agcgtcggggaggtggtcgtcttcctcccggggctccgggtaccgaggaccgtagacttc 290 |||||||| || |||||||| |||||||||||||||||||| ||||||| ||| |||||| Sbjct: 251 agcgtcggcgacgtggtcgtgttcctcccggggctccgggtgccgaggagcgtggacttc 310 Query: 291 tc 292 || Sbjct: 311 tc 312
>dbj|AK107295.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-C03, full insert sequence Length = 2439 Score = 339 bits (171), Expect = 2e-89 Identities = 636/791 (80%) Strand = Plus / Plus Query: 433 gcactgctaaccttctccaggctttggaagagtacctgccagttctgctaggactggtga 492 |||||||||| || || |||||| ||||||| || |||||||| ||||||||| |||||| Sbjct: 814 gcactgctaatctcctacaggctctggaagactatctgccagtgctgctaggattggtga 873 Query: 493 aagaaagcagtgatctgagaaacaaagcgcagtttgtttgggccaaccaagaggacgacg 552 | ||| | || || || | || || ||| || || ||| | ||||||||||| | | Sbjct: 874 aggaaggtagcgaattgcggcacggagtgcacttcgtctggactaaccaagaggataatg 933 Query: 553 ctgaggagacgtccatggccgatgctttgtatgaggtgctgtctgtgctgcacctgatgg 612 ||||||| ||| ||||||| ||||| | |||||| ||| ||| || ||||| |||||| Sbjct: 934 ctgaggaaacggccatggcagatgcatggtatgaagtgtcgtccgttctgcatttgatgg 993 Query: 613 ccatggtgtgcttcctgcaggccaactccctgcttcttccgaggtcatacggcgacggcc 672 ||||||| ||||| |||||||||| || ||||||||||| ||||||||||| || || Sbjct: 994 ccatggtctgcttgttgcaggccaattctctgcttcttcccaggtcatacggtgatggtt 1053 Query: 673 atgggccgagagtgtccgaagagagcaggcgagccactgttgatgttttcttgaaagcag 732 ||| ||| || || || ||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 1054 atgcgccaagggtttctgaagagagcagacgagctactgttgatgttttcttgaaggcat 1113 Query: 733 ctggatacttggattgtgcagttaatcaagtacttccgcagataccgcctgaaaaaagaa 792 |||| ||| | || || ||| ||| |||||||| || || ||| || | || ||| | Sbjct: 1114 ctggctacctagactgcgcaattagacaagtactaccccaaatatcgtcggagttaagga 1173 Query: 793 gggcactcccagttgatctagttgagggaaatctaaaagctcttagcttgcaaggacttg 852 | ||| ||||| ||||| | ||| |||||||| |||||||||||| |||||| || | Sbjct: 1174 gacaacttccagtagatctggctgaaggaaatctcaaagctcttagcctgcaagctctgg 1233 Query: 853 gccagggagttgatatgcaacttggattggcaattgataatccaaaggccactttagcag 912 | |||||||| || ||||||||||| |||||||||||| |||||||||||| |||| | Sbjct: 1234 gtcagggagtcgacatgcaacttggtctggcaattgatagcccaaaggccactctagcgg 1293 Query: 913 tcaaaaggcgtttagcttgcgagatggtcaaatattggcagcagattaaggatagcatac 972 | ||| |||| ||||||||||||||||||||||||||||| || ||| |||| ||||| | Sbjct: 1294 taaaacggcgcttagcttgcgagatggtcaaatattggcatcaaattcaggagagcattc 1353 Query: 973 cggagcttcctttgctggatggatgggcgaaaaagcacacactatttgtcaagtggaagt 1032 | || |||| | |||||||||| ||||||||| | | ||||| |||||||||| Sbjct: 1354 cagaaattccggtatccgatggatgggggaaaaagcatttattgtttgttaagtggaagt 1413 Query: 1033 atgctgaagcaaaggctgctgcatattacttccatgggttgattcttgatgagggaaaca 1092 ||| ||||||||||||||| ||||| || |||||||| |||||||| || |||||||||| Sbjct: 1414 atgttgaagcaaaggctgcagcatactatttccatggtttgattctagacgagggaaaca 1473 Query: 1093 ccgagaaatcacaggagatggcaatatcatccctacaagcgtcagaggagtttctgaaag 1152 | |||||||| || | |||||| || | || | ||||| ||||| || |||||||||| Sbjct: 1474 cagagaaatctcatggaatggcagtagctgccttgcaagcttcagaagaatttctgaaag 1533 Query: 1153 agagcaaaagagccgctgaggccttccattcaactcctccgacatcaaggatgtcaactc 1212 | |||||||| || |||| ||||||||| |||||||||| |||||||||| | |||| Sbjct: 1534 aaagcaaaagggcttctgaagccttccatgcaactcctccaacatcaaggagccccactc 1593 Query: 1213 ctttcggaaca 1223 ||||||||||| Sbjct: 1594 ctttcggaaca 1604 Score = 75.8 bits (38), Expect = 5e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 231 agcgtcggggaggtggtcgtcttcctcccggggctccgggtaccgaggaccgtagacttc 290 |||||||| || |||||||| |||||||||||||||||||| ||||||| ||| |||||| Sbjct: 615 agcgtcggcgacgtggtcgtgttcctcccggggctccgggtgccgaggagcgtggacttc 674 Query: 291 tc 292 || Sbjct: 675 tc 676
>dbj|AK064991.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D14, full insert sequence Length = 2272 Score = 333 bits (168), Expect = 1e-87 Identities = 636/791 (80%), Gaps = 2/791 (0%) Strand = Plus / Plus Query: 433 gcactgctaaccttctccaggctttggaagagtacctgccagttctgctaggactggtga 492 |||||||||| || || |||||| ||||||| || |||||||| ||||||||| |||||| Sbjct: 1004 gcactgctaatctcctacaggctctggaagactatctgccagtgctgctaggattggtga 1063 Query: 493 aagaaagcagtgatctgagaaacaaagcgcagtttgtttgggccaaccaagaggacgacg 552 | ||| | || || || | || || ||| || || ||| | ||||||||||| | | Sbjct: 1064 aggaaggtagcgaattgcggcacggagtgcacttcgtctggactaaccaagaggataatg 1123 Query: 553 ctgaggagacgtccatggccgatgctttgtatgaggtgctgtctgtgctgcacctgatgg 612 ||||||| ||| ||||||| ||||| | |||||| ||| |||| || ||||| |||||| Sbjct: 1124 ctgaggaaacggccatggcagatgcatggtatgaagtgttgtccgttctgcatttgatgg 1183 Query: 613 ccatggtgtgcttcctgcaggccaactccctgcttcttccgaggtcatacggcgacggcc 672 ||||||| ||||| |||||||||| || ||||||||||| ||||||||||| | || Sbjct: 1184 ccatggtctgcttgttgcaggccaattctctgcttcttcccaggtcatacgg--atggtt 1241 Query: 673 atgggccgagagtgtccgaagagagcaggcgagccactgttgatgttttcttgaaagcag 732 ||| ||| || || || ||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 1242 atgcgccaagggtttctgaagagagcagacgagctactgttgatgttttcttgaaggcat 1301 Query: 733 ctggatacttggattgtgcagttaatcaagtacttccgcagataccgcctgaaaaaagaa 792 |||| ||| | || || ||| ||| |||||||| || || ||| || | || ||| | Sbjct: 1302 ctggctacctagactgcgcaattagacaagtactaccccaaatatcgtcggagttaagga 1361 Query: 793 gggcactcccagttgatctagttgagggaaatctaaaagctcttagcttgcaaggacttg 852 | ||| ||||| ||||| | ||| |||||||| |||||||||||| |||||| || | Sbjct: 1362 gacaacttccagtagatctggctgaaggaaatctcaaagctcttagcctgcaagctctgg 1421 Query: 853 gccagggagttgatatgcaacttggattggcaattgataatccaaaggccactttagcag 912 | |||||||| || ||||||||||| |||||||||||| |||||||||||| |||| | Sbjct: 1422 gtcagggagtcgacatgcaacttggtctggcaattgatagcccaaaggccactctagcgg 1481 Query: 913 tcaaaaggcgtttagcttgcgagatggtcaaatattggcagcagattaaggatagcatac 972 | ||| |||| ||||||||||||||||||||||||||||| || ||| |||| ||||| | Sbjct: 1482 taaaacggcgcttagcttgcgagatggtcaaatattggcatcaaattcaggagagcattc 1541 Query: 973 cggagcttcctttgctggatggatgggcgaaaaagcacacactatttgtcaagtggaagt 1032 | || |||| | |||||||||| ||||||||| | | ||||| |||||||||| Sbjct: 1542 cagaaattccggtatcagatggatgggggaaaaagcatttattgtttgttaagtggaagt 1601 Query: 1033 atgctgaagcaaaggctgctgcatattacttccatgggttgattcttgatgagggaaaca 1092 ||| ||||||||||||||| ||||| || |||||||| |||||||| || |||||||||| Sbjct: 1602 atgttgaagcaaaggctgcagcatactatttccatggtttgattctagacgagggaaaca 1661 Query: 1093 ccgagaaatcacaggagatggcaatatcatccctacaagcgtcagaggagtttctgaaag 1152 | |||||||| || | |||||| || | || | ||||| ||||| || |||||||||| Sbjct: 1662 cagagaaatctcatggaatggcagtagctgccttgcaagcttcagaagaatttctgaaag 1721 Query: 1153 agagcaaaagagccgctgaggccttccattcaactcctccgacatcaaggatgtcaactc 1212 | |||||||| || |||| ||||||||| |||||||||| |||||||||| | |||| Sbjct: 1722 aaagcaaaagggcttctgaagccttccatgcaactcctccaacatcaaggagccccactc 1781 Query: 1213 ctttcggaaca 1223 ||||||||||| Sbjct: 1782 ctttcggaaca 1792 Score = 73.8 bits (37), Expect = 2e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 232 gcgtcggggaggtggtcgtcttcctcccggggctccgggtaccgaggaccgtagacttct 291 ||||||| || |||||||| |||||||||||||||||||| ||||||| ||| ||||||| Sbjct: 806 gcgtcggcgacgtggtcgtgttcctcccggggctccgggtgccgaggagcgtggacttct 865 Query: 292 c 292 | Sbjct: 866 c 866
>gb|AY109908.1| Zea mays CL40343_1 mRNA sequence Length = 1040 Score = 135 bits (68), Expect = 6e-28 Identities = 249/310 (80%), Gaps = 7/310 (2%) Strand = Plus / Minus Query: 894 ccaaaggccactttagcagtcaaaaggcgtttagcttgcgagatggtcaaatattggcag 953 ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 942 ccaaaggccactttagcagtcaaaaggcgcttagcctgtgagatggtcaaatattggcaa 883 Query: 954 cagattaaggatagcataccggagcttcctttgctggatggatgggcgaaaaagcacaca 1013 || || | || ||||| || |||||||| | |||||||||| || |||||| Sbjct: 882 caagttcaagagagcattccagagcttccagtctctgatggatggggtaagaagcaccgg 823 Query: 1014 ctatttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttg 1073 |||||||| ||||||||||||| |||||| || ||||| || ||||| || ||| Sbjct: 822 ctatttgtaaagtggaagtatgttgaagccaa-------gcatactatttccacggtttg 770 Query: 1074 attcttgatgagggaaacaccgagaaatcacaggagatggcaatatcatccctacaagcg 1133 |||||||| |||||||| ||||||||||| || | ||||||||| | | |||||||| Sbjct: 769 attcttgacgagggaaataccgagaaatcccatggaatggcaatagctgcactacaagct 710 Query: 1134 tcagaggagtttctgaaagagagcaaaagagccgctgaggccttccattcaactcctccg 1193 ||||| || ||||||||||| ||||||| | | || ||||||||| |||||||||| Sbjct: 709 tcagaagaatttctgaaagaaagcaaaatggtttcggaagccttccatgcaactcctcca 650 Query: 1194 acatcaagga 1203 ||||| |||| Sbjct: 649 acatcgagga 640
>gb|BT018486.1| Zea mays clone EL01N0424E08.d mRNA sequence Length = 1830 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 537 aaccaagaggacgacgctgaggagacgtccatggccgatgctttgtatgaggtgctgtct 596 ||||||||||| | |||||||||||| ||||| |||| | ||| ||||||||||| Sbjct: 42 aaccaagaggataatgctgaggagacgaccatgttagatgtctggtacgaggtgctgtcc 101 Query: 597 gtgctgcacctgatggccatggtgtgcttcctgcaggccaactccctgcttcttccgagg 656 |||| |||| ||||||||||||| ||||| | |||||||||| |||||||||| || ||| Sbjct: 102 gtgcggcacttgatggccatggtctgcttgcagcaggccaacaccctgcttctcccaagg 161 Query: 657 tcatacggcgacggccatgggccgagagtgtccgaagagagcaggcgagccactgttgat 716 |||||||| | ||| | | || ||||| || |||||||| || ||||||||||||||| Sbjct: 162 tcatacgggggtggctacgccccaagagtttctgaagagagtagacgagccactgttgat 221 Query: 717 gttttcttgaaagcagctggata 739 || |||||||| ||||||||||| Sbjct: 222 gtcttcttgaaggcagctggata 244
>emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0115K01-H0319F09, complete sequence Length = 189580 Score = 119 bits (60), Expect = 3e-23 Identities = 159/192 (82%) Strand = Plus / Plus Query: 856 agggagttgatatgcaacttggattggcaattgataatccaaaggccactttagcagtca 915 ||||||| || ||||||||||| |||||||||||| |||||||||||| |||| || | Sbjct: 76866 agggagtcgacatgcaacttggtctggcaattgatagcccaaaggccactctagcggtaa 76925 Query: 916 aaaggcgtttagcttgcgagatggtcaaatattggcagcagattaaggatagcataccgg 975 || |||| ||||||||||||||||||||||||||||| || ||| |||| ||||| || | Sbjct: 76926 aacggcgcttagcttgcgagatggtcaaatattggcatcaaattcaggagagcattccag 76985 Query: 976 agcttcctttgctggatggatgggcgaaaaagcacacactatttgtcaagtggaagtatg 1035 | |||| | |||||||||| ||||||||| | | ||||| ||||||||||||| Sbjct: 76986 aaattccggtatccgatggatgggggaaaaagcatttattgtttgttaagtggaagtatg 77045 Query: 1036 ctgaagcaaagg 1047 ||||||||||| Sbjct: 77046 ttgaagcaaagg 77057 Score = 99.6 bits (50), Expect = 3e-17 Identities = 131/158 (82%) Strand = Plus / Plus Query: 1045 aggctgctgcatattacttccatgggttgattcttgatgagggaaacaccgagaaatcac 1104 ||||||| ||||| || |||||||| |||||||| || ||||||||||| |||||||| | Sbjct: 77147 aggctgcagcatactatttccatggtttgattctagacgagggaaacacagagaaatctc 77206 Query: 1105 aggagatggcaatatcatccctacaagcgtcagaggagtttctgaaagagagcaaaagag 1164 | | |||||| || | || | ||||| ||||| || ||||||||||| |||||||| | Sbjct: 77207 atggaatggcagtagctgccttgcaagcttcagaagaatttctgaaagaaagcaaaaggg 77266 Query: 1165 ccgctgaggccttccattcaactcctccgacatcaagg 1202 | |||| ||||||||| |||||||||| ||||||||| Sbjct: 77267 cttctgaagccttccatgcaactcctccaacatcaagg 77304 Score = 81.8 bits (41), Expect = 8e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 556 aggagacgtccatggccgatgctttgtatgaggtgctgtctgtgctgcacctgatggcca 615 |||| ||| ||||||| ||||| | |||||| ||| |||| || ||||| ||||||||| Sbjct: 75972 aggaaacggccatggcagatgcatggtatgaagtgttgtccgttctgcatttgatggcca 76031 Query: 616 tggtgtgcttcctgcaggccaactccctgcttcttccgaggtcatacgg 664 |||| ||||| |||||||||| || ||||||||||| ||||||||||| Sbjct: 76032 tggtctgcttgttgcaggccaattctctgcttcttcccaggtcatacgg 76080 Score = 75.8 bits (38), Expect = 5e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 231 agcgtcggggaggtggtcgtcttcctcccggggctccgggtaccgaggaccgtagacttc 290 |||||||| || |||||||| |||||||||||||||||||| ||||||| ||| |||||| Sbjct: 75372 agcgtcggcgacgtggtcgtgttcctcccggggctccgggtgccgaggagcgtggacttc 75431 Query: 291 tc 292 || Sbjct: 75432 tc 75433 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 692 agagagcaggcgagccactgttgatgttttcttgaaagcagctgg 736 ||||||||| ||||| |||||||||||||||||||| ||| |||| Sbjct: 76239 agagagcagacgagctactgttgatgttttcttgaaggcatctgg 76283 Score = 44.1 bits (22), Expect = 1.7 Identities = 40/46 (86%) Strand = Plus / Plus Query: 801 ccagttgatctagttgagggaaatctaaaagctcttagcttgcaag 846 ||||| ||||| | ||| |||||||| |||||||||||| |||||| Sbjct: 76439 ccagtagatctggctgaaggaaatctcaaagctcttagcctgcaag 76484
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 119 bits (60), Expect = 3e-23 Identities = 159/192 (82%) Strand = Plus / Plus Query: 856 agggagttgatatgcaacttggattggcaattgataatccaaaggccactttagcagtca 915 ||||||| || ||||||||||| |||||||||||| |||||||||||| |||| || | Sbjct: 26340121 agggagtcgacatgcaacttggtctggcaattgatagcccaaaggccactctagcggtaa 26340180 Query: 916 aaaggcgtttagcttgcgagatggtcaaatattggcagcagattaaggatagcataccgg 975 || |||| ||||||||||||||||||||||||||||| || ||| |||| ||||| || | Sbjct: 26340181 aacggcgcttagcttgcgagatggtcaaatattggcatcaaattcaggagagcattccag 26340240 Query: 976 agcttcctttgctggatggatgggcgaaaaagcacacactatttgtcaagtggaagtatg 1035 | |||| | |||||||||| ||||||||| | | ||||| ||||||||||||| Sbjct: 26340241 aaattccggtatccgatggatgggggaaaaagcatttattgtttgttaagtggaagtatg 26340300 Query: 1036 ctgaagcaaagg 1047 ||||||||||| Sbjct: 26340301 ttgaagcaaagg 26340312 Score = 99.6 bits (50), Expect = 3e-17 Identities = 131/158 (82%) Strand = Plus / Plus Query: 1045 aggctgctgcatattacttccatgggttgattcttgatgagggaaacaccgagaaatcac 1104 ||||||| ||||| || |||||||| |||||||| || ||||||||||| |||||||| | Sbjct: 26340402 aggctgcagcatactatttccatggtttgattctagacgagggaaacacagagaaatctc 26340461 Query: 1105 aggagatggcaatatcatccctacaagcgtcagaggagtttctgaaagagagcaaaagag 1164 | | |||||| || | || | ||||| ||||| || ||||||||||| |||||||| | Sbjct: 26340462 atggaatggcagtagctgccttgcaagcttcagaagaatttctgaaagaaagcaaaaggg 26340521 Query: 1165 ccgctgaggccttccattcaactcctccgacatcaagg 1202 | |||| ||||||||| |||||||||| ||||||||| Sbjct: 26340522 cttctgaagccttccatgcaactcctccaacatcaagg 26340559 Score = 81.8 bits (41), Expect = 8e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 556 aggagacgtccatggccgatgctttgtatgaggtgctgtctgtgctgcacctgatggcca 615 |||| ||| ||||||| ||||| | |||||| ||| |||| || ||||| ||||||||| Sbjct: 26339227 aggaaacggccatggcagatgcatggtatgaagtgttgtccgttctgcatttgatggcca 26339286 Query: 616 tggtgtgcttcctgcaggccaactccctgcttcttccgaggtcatacgg 664 |||| ||||| |||||||||| || ||||||||||| ||||||||||| Sbjct: 26339287 tggtctgcttgttgcaggccaattctctgcttcttcccaggtcatacgg 26339335 Score = 75.8 bits (38), Expect = 5e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 231 agcgtcggggaggtggtcgtcttcctcccggggctccgggtaccgaggaccgtagacttc 290 |||||||| || |||||||| |||||||||||||||||||| ||||||| ||| |||||| Sbjct: 26338627 agcgtcggcgacgtggtcgtgttcctcccggggctccgggtgccgaggagcgtggacttc 26338686 Query: 291 tc 292 || Sbjct: 26338687 tc 26338688 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 692 agagagcaggcgagccactgttgatgttttcttgaaagcagctgg 736 ||||||||| ||||| |||||||||||||||||||| ||| |||| Sbjct: 26339494 agagagcagacgagctactgttgatgttttcttgaaggcatctgg 26339538 Score = 44.1 bits (22), Expect = 1.7 Identities = 40/46 (86%) Strand = Plus / Plus Query: 801 ccagttgatctagttgagggaaatctaaaagctcttagcttgcaag 846 ||||| ||||| | ||| |||||||| |||||||||||| |||||| Sbjct: 26339694 ccagtagatctggctgaaggaaatctcaaagctcttagcctgcaag 26339739
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 119 bits (60), Expect = 3e-23 Identities = 159/192 (82%) Strand = Plus / Plus Query: 856 agggagttgatatgcaacttggattggcaattgataatccaaaggccactttagcagtca 915 ||||||| || ||||||||||| |||||||||||| |||||||||||| |||| || | Sbjct: 116698 agggagtcgacatgcaacttggtctggcaattgatagcccaaaggccactctagcggtaa 116757 Query: 916 aaaggcgtttagcttgcgagatggtcaaatattggcagcagattaaggatagcataccgg 975 || |||| ||||||||||||||||||||||||||||| || ||| |||| ||||| || | Sbjct: 116758 aacggcgcttagcttgcgagatggtcaaatattggcatcaaattcaggagagcattccag 116817 Query: 976 agcttcctttgctggatggatgggcgaaaaagcacacactatttgtcaagtggaagtatg 1035 | |||| | |||||||||| ||||||||| | | ||||| ||||||||||||| Sbjct: 116818 aaattccggtatccgatggatgggggaaaaagcatttattgtttgttaagtggaagtatg 116877 Query: 1036 ctgaagcaaagg 1047 ||||||||||| Sbjct: 116878 ttgaagcaaagg 116889 Score = 99.6 bits (50), Expect = 3e-17 Identities = 131/158 (82%) Strand = Plus / Plus Query: 1045 aggctgctgcatattacttccatgggttgattcttgatgagggaaacaccgagaaatcac 1104 ||||||| ||||| || |||||||| |||||||| || ||||||||||| |||||||| | Sbjct: 116979 aggctgcagcatactatttccatggtttgattctagacgagggaaacacagagaaatctc 117038 Query: 1105 aggagatggcaatatcatccctacaagcgtcagaggagtttctgaaagagagcaaaagag 1164 | | |||||| || | || | ||||| ||||| || ||||||||||| |||||||| | Sbjct: 117039 atggaatggcagtagctgccttgcaagcttcagaagaatttctgaaagaaagcaaaaggg 117098 Query: 1165 ccgctgaggccttccattcaactcctccgacatcaagg 1202 | |||| ||||||||| |||||||||| ||||||||| Sbjct: 117099 cttctgaagccttccatgcaactcctccaacatcaagg 117136 Score = 81.8 bits (41), Expect = 8e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 556 aggagacgtccatggccgatgctttgtatgaggtgctgtctgtgctgcacctgatggcca 615 |||| ||| ||||||| ||||| | |||||| ||| |||| || ||||| ||||||||| Sbjct: 115804 aggaaacggccatggcagatgcatggtatgaagtgttgtccgttctgcatttgatggcca 115863 Query: 616 tggtgtgcttcctgcaggccaactccctgcttcttccgaggtcatacgg 664 |||| ||||| |||||||||| || ||||||||||| ||||||||||| Sbjct: 115864 tggtctgcttgttgcaggccaattctctgcttcttcccaggtcatacgg 115912 Score = 75.8 bits (38), Expect = 5e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 231 agcgtcggggaggtggtcgtcttcctcccggggctccgggtaccgaggaccgtagacttc 290 |||||||| || |||||||| |||||||||||||||||||| ||||||| ||| |||||| Sbjct: 115204 agcgtcggcgacgtggtcgtgttcctcccggggctccgggtgccgaggagcgtggacttc 115263 Query: 291 tc 292 || Sbjct: 115264 tc 115265 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 692 agagagcaggcgagccactgttgatgttttcttgaaagcagctgg 736 ||||||||| ||||| |||||||||||||||||||| ||| |||| Sbjct: 116071 agagagcagacgagctactgttgatgttttcttgaaggcatctgg 116115 Score = 44.1 bits (22), Expect = 1.7 Identities = 40/46 (86%) Strand = Plus / Plus Query: 801 ccagttgatctagttgagggaaatctaaaagctcttagcttgcaag 846 ||||| ||||| | ||| |||||||| |||||||||||| |||||| Sbjct: 116271 ccagtagatctggctgaaggaaatctcaaagctcttagcctgcaag 116316
>ref|NM_101657.2| Arabidopsis thaliana unknown protein (AT1G17940) mRNA, complete cds Length = 1462 Score = 81.8 bits (41), Expect = 8e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 1017 tttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttgatt 1076 ||||| ||||||||||||| |||||| |||||||| || || |||| ||||| |||||| Sbjct: 811 tttgttaagtggaagtatgttgaagctaaggctgcggcttactactatcatggtttgatt 870 Query: 1077 cttgatgagggaaacaccgagaaatcaca 1105 |||||||| |||||||| ||||| ||||| Sbjct: 871 cttgatgaaggaaacacagagaagtcaca 899 Score = 69.9 bits (35), Expect = 3e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 831 gctcttagcttgcaaggacttggccagggagttgatatgcaacttggattggcaattgat 890 |||||| ||||||||| |||||||||||| |||||||| |||||||| |||| |||||| Sbjct: 625 gctctttgcttgcaagcacttggccagggtgttgatatccaacttggcatggcgattgat 684 Query: 891 aatccaaaggccact 905 | ||||||||||| Sbjct: 685 agctcaaaggccact 699
>gb|BT023744.1| Arabidopsis thaliana At1g17940 gene, complete cds Length = 1218 Score = 81.8 bits (41), Expect = 8e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 1017 tttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttgatt 1076 ||||| ||||||||||||| |||||| |||||||| || || |||| ||||| |||||| Sbjct: 844 tttgttaagtggaagtatgttgaagctaaggctgcggcttactactatcatggtttgatt 903 Query: 1077 cttgatgagggaaacaccgagaaatcaca 1105 |||||||| |||||||| ||||| ||||| Sbjct: 904 cttgatgaaggaaacacagagaagtcaca 932 Score = 61.9 bits (31), Expect = 7e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 831 gctcttagcttgcaaggacttggccagggagttgatatgcaacttggattggcaattgat 890 |||||| ||||||||| |||||||||||| ||||||| |||||||| |||| |||||| Sbjct: 658 gctctttgcttgcaagcacttggccagggtattgatatccaacttggcatggcgattgat 717 Query: 891 aatccaaaggccact 905 | ||||||||||| Sbjct: 718 agctcaaaggccact 732
>dbj|AK221755.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-56-I10 Length = 1660 Score = 81.8 bits (41), Expect = 8e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 1017 tttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttgatt 1076 ||||| ||||||||||||| |||||| |||||||| || || |||| ||||| |||||| Sbjct: 999 tttgttaagtggaagtatgttgaagctaaggctgcggcttactactatcatggtttgatt 1058 Query: 1077 cttgatgagggaaacaccgagaaatcaca 1105 |||||||| |||||||| ||||| ||||| Sbjct: 1059 cttgatgaaggaaacacagagaagtcaca 1087 Score = 69.9 bits (35), Expect = 3e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 831 gctcttagcttgcaaggacttggccagggagttgatatgcaacttggattggcaattgat 890 |||||| ||||||||| |||||||||||| |||||||| |||||||| |||| |||||| Sbjct: 813 gctctttgcttgcaagcacttggccagggtgttgatatccaacttggcatggcgattgat 872 Query: 891 aatccaaaggccact 905 | ||||||||||| Sbjct: 873 agctcaaaggccact 887
>gb|BT022052.1| Arabidopsis thaliana At1g17940 gene, complete cds Length = 1328 Score = 81.8 bits (41), Expect = 8e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 1017 tttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttgatt 1076 ||||| ||||||||||||| |||||| |||||||| || || |||| ||||| |||||| Sbjct: 902 tttgttaagtggaagtatgttgaagctaaggctgcggcttactactatcatggtttgatt 961 Query: 1077 cttgatgagggaaacaccgagaaatcaca 1105 |||||||| |||||||| ||||| ||||| Sbjct: 962 cttgatgaaggaaacacagagaagtcaca 990 Score = 69.9 bits (35), Expect = 3e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 831 gctcttagcttgcaaggacttggccagggagttgatatgcaacttggattggcaattgat 890 |||||| ||||||||| |||||||||||| |||||||| |||||||| |||| |||||| Sbjct: 716 gctctttgcttgcaagcacttggccagggtgttgatatccaacttggcatggcgattgat 775 Query: 891 aatccaaaggccact 905 | ||||||||||| Sbjct: 776 agctcaaaggccact 790
>ref|NM_105999.3| Arabidopsis thaliana unknown protein (AT1G73390) mRNA, complete cds Length = 1573 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 1017 tttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttgatt 1076 ||||| ||||||||||||| |||||| |||||||| || || |||| ||| || ||||| Sbjct: 891 tttgttaagtggaagtatgttgaagctaaggctgcagcttactactaccacggtctgatt 950 Query: 1077 cttgatgagggaaacaccgagaaatcaca 1105 |||||||| ||||| || ||||||||||| Sbjct: 951 cttgatgaaggaaatacagagaaatcaca 979
>ref|NM_202408.1| Arabidopsis thaliana unknown protein (AT1G73390) mRNA, complete cds Length = 1747 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 1017 tttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttgatt 1076 ||||| ||||||||||||| |||||| |||||||| || || |||| ||| || ||||| Sbjct: 1065 tttgttaagtggaagtatgttgaagctaaggctgcagcttactactaccacggtctgatt 1124 Query: 1077 cttgatgagggaaacaccgagaaatcaca 1105 |||||||| ||||| || ||||||||||| Sbjct: 1125 cttgatgaaggaaatacagagaaatcaca 1153
>ref|NM_202409.1| Arabidopsis thaliana unknown protein (AT1G73390) mRNA, complete cds Length = 1775 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 1017 tttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttgatt 1076 ||||| ||||||||||||| |||||| |||||||| || || |||| ||| || ||||| Sbjct: 1093 tttgttaagtggaagtatgttgaagctaaggctgcagcttactactaccacggtctgatt 1152 Query: 1077 cttgatgagggaaacaccgagaaatcaca 1105 |||||||| ||||| || ||||||||||| Sbjct: 1153 cttgatgaaggaaatacagagaaatcaca 1181
>gb|BT015943.1| Arabidopsis thaliana At1g73390 mRNA, complete cds Length = 1260 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 1017 tttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttgatt 1076 ||||| ||||||||||||| |||||| |||||||| || || |||| ||| || ||||| Sbjct: 841 tttgttaagtggaagtatgttgaagctaaggctgcagcttactactaccacggtctgatt 900 Query: 1077 cttgatgagggaaacaccgagaaatcaca 1105 |||||||| ||||| || ||||||||||| Sbjct: 901 cttgatgaaggaaatacagagaaatcaca 929
>gb|AY072312.1| Arabidopsis thaliana unknown protein (At1g73390) mRNA, complete cds Length = 1572 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 1017 tttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttgatt 1076 ||||| ||||||||||||| |||||| |||||||| || || |||| ||| || ||||| Sbjct: 891 tttgttaagtggaagtatgttgaagctaaggctgcagcttactactaccacggtctgatt 950 Query: 1077 cttgatgagggaaacaccgagaaatcaca 1105 |||||||| ||||| || ||||||||||| Sbjct: 951 cttgatgaaggaaatacagagaaatcaca 979
>emb|BX816145.1|CNS0ADCE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1703 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 1017 tttgtcaagtggaagtatgctgaagcaaaggctgctgcatattacttccatgggttgatt 1076 ||||| ||||||||||||| |||||| |||||||| || || |||| ||| || ||||| Sbjct: 1065 tttgttaagtggaagtatgttgaagctaaggctgcagcttactactaccacggtctgatt 1124 Query: 1077 cttgatgagggaaacaccgagaaatcaca 1105 |||||||| ||||| || ||||||||||| Sbjct: 1125 cttgatgaaggaaatacagagaaatcaca 1153
>gb|AC189500.1| Brassica rapa subsp. pekinensis clone KBrB086N06, complete sequence Length = 144247 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Minus Query: 1045 aggctgctgcatattacttccatgggttgattcttgatgagggaaacaccgagaaatcac 1104 ||||||| || || |||| |||||| || ||||||||||| |||||||| |||||||||| Sbjct: 126334 aggctgcagcttactactaccatggcttaattcttgatgaaggaaacacagagaaatcac 126275 Query: 1105 a 1105 | Sbjct: 126274 a 126274
>ref|NM_001055132.1| Oryza sativa (japonica cultivar-group) Os02g0828100 (Os02g0828100) mRNA, complete cds Length = 1540 Score = 50.1 bits (25), Expect = 0.027 Identities = 64/77 (83%) Strand = Plus / Plus Query: 537 aaccaagaggacgacgctgaggagacgtccatggccgatgctttgtatgaggtgctgtct 596 ||||||||||| ||||| ||||| ||||| ||| || ||||| |||||||||||| || Sbjct: 424 aaccaagaggatgacgcagaggatacgtcaatgcccagtgcttggtatgaggtgctatca 483 Query: 597 gtgctgcacctgatggc 613 || || ||| ||||||| Sbjct: 484 gttctacacttgatggc 500 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 873 cttggattggcaattgataatccaaaggc 901 ||||||||||||||||| | ||||||||| Sbjct: 760 cttggattggcaattgacagtccaaaggc 788
>gb|AC034106.4|F2H15 Sequence of BAC F2H15 from Arabidopsis thaliana chromosome 1, complete sequence Length = 75133 Score = 50.1 bits (25), Expect = 0.027 Identities = 37/41 (90%) Strand = Plus / Minus Query: 1065 catgggttgattcttgatgagggaaacaccgagaaatcaca 1105 ||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 51136 catggtttgattcttgatgaaggaaacacagagaagtcaca 51096
>dbj|AK070854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064O14, full insert sequence Length = 1540 Score = 50.1 bits (25), Expect = 0.027 Identities = 64/77 (83%) Strand = Plus / Plus Query: 537 aaccaagaggacgacgctgaggagacgtccatggccgatgctttgtatgaggtgctgtct 596 ||||||||||| ||||| ||||| ||||| ||| || ||||| |||||||||||| || Sbjct: 426 aaccaagaggatgacgcagaggatacgtcaatgcccagtgcttggtatgaggtgctatca 485 Query: 597 gtgctgcacctgatggc 613 || || ||| ||||||| Sbjct: 486 gttctacacttgatggc 502 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 873 cttggattggcaattgataatccaaaggc 901 ||||||||||||||||| | ||||||||| Sbjct: 762 cttggattggcaattgacagtccaaaggc 790
>gb|AC154597.2| Mus musculus BAC clone RP23-355G2 from chromosome 14, complete sequence Length = 201544 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1263 agcaagctccaggataaccagga 1285 ||||||||||||||||||||||| Sbjct: 168572 agcaagctccaggataaccagga 168594
>gb|AC124400.4| Mus musculus BAC clone RP24-357O21 from chromosome 14, complete sequence Length = 191219 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1263 agcaagctccaggataaccagga 1285 ||||||||||||||||||||||| Sbjct: 26045 agcaagctccaggataaccagga 26067
>gb|AY325816.1| Zea mays BAC clone Z013I05, complete sequence Length = 152337 Score = 46.1 bits (23), Expect = 0.42 Identities = 53/63 (84%) Strand = Plus / Plus Query: 704 agccactgttgatgttttcttgaaagcagctggatacttggattgtgcagttaatcaagt 763 ||||||||||||| | |||||||| |||||| || ||||| ||||||||| |||| || Sbjct: 58126 agccactgttgatctcttcttgaagtcagctgagtatttggactgtgcagttcatcatgt 58185 Query: 764 act 766 ||| Sbjct: 58186 act 58188
>gb|AC184098.2| Populus trichocarpa clone Pop1-90I7, complete sequence Length = 93295 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1575 ttagaaagaaaaaacaatttta 1596 |||||||||||||||||||||| Sbjct: 19284 ttagaaagaaaaaacaatttta 19305
>gb|BT013835.1| Lycopersicon esculentum clone 132792R, mRNA sequence Length = 2014 Score = 44.1 bits (22), Expect = 1.7 Identities = 55/66 (83%) Strand = Plus / Plus Query: 690 gaagagagcaggcgagccactgttgatgttttcttgaaagcagctggatacttggattgt 749 ||||||||||||||| | |||||||| ||||| | || || |||||||| | |||||| Sbjct: 838 gaagagagcaggcgatcttctgttgatattttcctaaaggctgctggatatcttgattgt 897 Query: 750 gcagtt 755 |||||| Sbjct: 898 gcagtt 903
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1576 tagaaagaaaaaacaattttat 1597 |||||||||||||||||||||| Sbjct: 1522894 tagaaagaaaaaacaattttat 1522873
>gb|AC012396.7|AC012396 Arabidopsis thaliana chromosome 1 BAC T9L24 genomic sequence, complete sequence Length = 90459 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1072 tgattcttgatgagggaaacaccgagaaatcaca 1105 ||||||||||||| ||||| || ||||||||||| Sbjct: 61353 tgattcttgatgaaggaaatacagagaaatcaca 61386
>emb|AL671891.12| Mouse DNA sequence from clone RP23-405E21 on chromosome X, complete sequence Length = 195749 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 tgaaagaaagcagtgatctgag 511 |||||||||||||||||||||| Sbjct: 162309 tgaaagaaagcagtgatctgag 162330
>emb|AL837516.14| Mouse DNA sequence from clone RP23-234L8 on chromosome 2, complete sequence Length = 202046 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1263 agcaagctccaggataaccagg 1284 |||||||||||||||||||||| Sbjct: 7696 agcaagctccaggataaccagg 7675
>gb|AC190046.4| Rhesus Macaque BAC CH250-438H1 () complete sequence Length = 155409 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1139 ggagtttctgaaagagagcaa 1159 ||||||||||||||||||||| Sbjct: 71024 ggagtttctgaaagagagcaa 71044
>ref|XM_001024564.1| Tetrahymena thermophila SB210 ABC transporter family protein (TTHERM_00300370) mRNA, complete cds Length = 6309 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1579 aaagaaaaaacaattttatta 1599 ||||||||||||||||||||| Sbjct: 4081 aaagaaaaaacaattttatta 4101
>gb|AC147002.20| Medicago truncatula clone mth2-151m16, complete sequence Length = 128621 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1575 ttagaaagaaaaaacaatttt 1595 ||||||||||||||||||||| Sbjct: 3777 ttagaaagaaaaaacaatttt 3757
>gb|AC100511.12| Mus musculus chromosome 3, clone RP23-144N19, complete sequence Length = 200790 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1680 ttacaaaatgcttttgttgac 1700 ||||||||||||||||||||| Sbjct: 98202 ttacaaaatgcttttgttgac 98222
>gb|AC156039.4| Mus musculus BAC clone RP23-24C2 from chromosome 10, complete sequence Length = 206634 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1573 tgttagaaagaaaaaacaatt 1593 ||||||||||||||||||||| Sbjct: 172619 tgttagaaagaaaaaacaatt 172639
>gb|AC123512.4| Homo sapiens 12 BAC RP11-24B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86706 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1504 ctgaaaaagaacataaactct 1524 ||||||||||||||||||||| Sbjct: 73381 ctgaaaaagaacataaactct 73401
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1588 acaattttattactgtcgaccagtt 1612 ||||||| ||||||||||||||||| Sbjct: 7739179 acaatttcattactgtcgaccagtt 7739155
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 708 actgttgatgttttcttgaaa 728 ||||||||||||||||||||| Sbjct: 421973 actgttgatgttttcttgaaa 421993 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 ggcggaggacggcgcggcacg 423 ||||||||||||||||||||| Sbjct: 5392980 ggcggaggacggcgcggcacg 5392960
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 873 cttggattggcaattgataatccaaaggc 901 ||||||||||||||||| | ||||||||| Sbjct: 35598712 cttggattggcaattgacagtccaaaggc 35598684
>emb|AL050342.42|HSDJ655K7 Human DNA sequence from clone RP4-655K7 on chromosome 1p35.3-36.13 Contains part of a gene encoding a novel protein,, complete sequence Length = 116857 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1674 tttgaattacaaaatgctttt 1694 ||||||||||||||||||||| Sbjct: 81717 tttgaattacaaaatgctttt 81737
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 873 cttggattggcaattgataatccaaaggc 901 ||||||||||||||||| | ||||||||| Sbjct: 115104 cttggattggcaattgacagtccaaaggc 115076
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 708 actgttgatgttttcttgaaa 728 ||||||||||||||||||||| Sbjct: 131926 actgttgatgttttcttgaaa 131946
>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529B09 Length = 138188 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 ggcggaggacggcgcggcacg 423 ||||||||||||||||||||| Sbjct: 23914 ggcggaggacggcgcggcacg 23894
>gb|AC154688.2| Mus musculus BAC clone RP23-140P24 from 13, complete sequence Length = 213029 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 723 ttgaaagcagctggatacttg 743 ||||||||||||||||||||| Sbjct: 1118 ttgaaagcagctggatacttg 1098
>gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, complete sequence Length = 182420 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 723 ttgaaagcagctggatacttg 743 ||||||||||||||||||||| Sbjct: 32783 ttgaaagcagctggatacttg 32803
>gb|AC133944.4| Mus musculus BAC clone RP24-113L10 from 10, complete sequence Length = 167418 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1573 tgttagaaagaaaaaacaatt 1593 ||||||||||||||||||||| Sbjct: 76456 tgttagaaagaaaaaacaatt 76436
>emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151024 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1588 acaattttattactgtcgaccagtt 1612 ||||||| ||||||||||||||||| Sbjct: 126574 acaatttcattactgtcgaccagtt 126550
>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1588 acaattttattactgtcgaccagtt 1612 ||||||| ||||||||||||||||| Sbjct: 38170 acaatttcattactgtcgaccagtt 38146
>gb|U78289.1|SFU78289 Streptomyces fradiae tylactone synthase, starter module and modules 1-7, (tylG) gene, complete cds Length = 43280 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 609 atggccatggtgtgcttcctg 629 ||||||||||||||||||||| Sbjct: 36256 atggccatggtgtgcttcctg 36236
>emb|AL671912.8| Mouse DNA sequence from clone RP23-386I5 on chromosome X, complete sequence Length = 186109 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1288 ttaacacccaggaaagaacat 1308 ||||||||||||||||||||| Sbjct: 168143 ttaacacccaggaaagaacat 168123 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 319,387,204 Number of extensions: 17434147 Number of successful extensions: 329397 Number of sequences better than 10.0: 53 Number of HSP's gapped: 329388 Number of HSP's successfully gapped: 97 Length of query: 1714 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1691 Effective length of database: 18,503,978,556 Effective search space: 31290227738196 Effective search space used: 31290227738196 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)