Clone Name	FLbaf65e11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	Q9P6Q3:BCS1_SCHPO Probable mitochondrial chaperone BCS1 - Schizo...	109	5e-23
2	P32839:BCS1_YEAST Mitochondrial chaperone BCS1 - Saccharomyces c...	93	3e-18
3	Q7ZTL7:BCS1_XENLA Mitochondrial chaperone BCS1 - Xenopus laevis ...	93	4e-18
4	Q7ZV60:BCS1_DANRE Mitochondrial chaperone BCS1 - Danio rerio (Ze...	92	1e-17
5	Q9Y276:BCS1_HUMAN Mitochondrial chaperone BCS1 - Homo sapiens (H...	91	1e-17
6	Q5E9H5:BCS1_BOVIN Mitochondrial chaperone BCS1 - Bos taurus (Bov...	90	4e-17
7	Q9CZP5:BCS1_MOUSE Mitochondrial chaperone BCS1 - Mus musculus (M...	89	6e-17
8	Q5UR45:YL572_MIMIV Putative AAA-family ATPase L572 - Mimivirus	74	3e-12
9	O32617:FTSH_HELFE Cell division protease ftsH homolog - Helicoba...	61	1e-08
10	P71408:FTSH_HELPY Cell division protease ftsH homolog - Helicoba...	59	9e-08
11	Q9ZM66:FTSH_HELPJ Cell division protease ftsH homolog - Helicoba...	59	9e-08
12	P73437:FTSH3_SYNY3 Cell division protease ftsH homolog 3 - Synec...	59	9e-08
13	Q90732:PRS4_CHICK 26S protease regulatory subunit 4 - Gallus gal...	57	2e-07
14	P40341:RCA1_YEAST Mitochondrial respiratory chain complexes asse...	56	5e-07
15	P32795:YME1_YEAST Protein YME1 - Saccharomyces cerevisiae (Baker...	56	6e-07
16	P75120:FTSH_MYCPN Cell division protease ftsH homolog - Mycoplas...	55	8e-07
17	P62193:PRS4_RAT 26S protease regulatory subunit 4 - Rattus norve...	55	1e-06
18	P62192:PRS4_MOUSE 26S protease regulatory subunit 4 - Mus muscul...	55	1e-06
19	P62191:PRS4_HUMAN 26S protease regulatory subunit 4 - Homo sapie...	55	1e-06
20	P48601:PRS4_DROME 26S protease regulatory subunit 4 - Drosophila...	55	1e-06
21	Q5UPR4:YR776_MIMIV Uncharacterized protein R776 - Mimivirus	55	1e-06
22	P46469:FTSH_LACLA Cell division protease ftsH homolog - Lactococ...	55	1e-06
23	O74445:PRS10_SCHPO Probable 26S protease subunit rpt4 - Schizosa...	54	2e-06
24	Q9FH02:FTSH2_ARATH Cell division protease ftsH homolog 2, chloro...	54	2e-06
25	O28972:Y1297_ARCFU Cell division cycle protein 48 homolog AF_129...	54	3e-06
26	O82150:FTSH_TOBAC Cell division protease ftsH homolog, chloropla...	54	3e-06
27	P0A4V8:FTSH_MYCTU Cell division protease ftsH homolog - Mycobact...	54	3e-06
28	P0A4V9:FTSH_MYCBO Cell division protease ftsH homolog - Mycobact...	54	3e-06
29	Q9BAE0:FTSH_MEDSA Cell division protease ftsH homolog, chloropla...	54	3e-06
30	P46465:PRS6A_ORYSJ 26S protease regulatory subunit 6A homolog - ...	53	4e-06
31	Q5Z974:FTSH_ORYSJ Cell division protease ftsH homolog, chloropla...	53	4e-06
32	O04019:PRS6A_ARATH 26S protease regulatory subunit 6A homolog - ...	53	5e-06
33	P47695:FTSH_MYCGE Cell division protease ftsH homolog - Mycoplas...	53	5e-06
34	Q9CD58:FTSH_MYCLE Cell division protease ftsH homolog - Mycobact...	52	7e-06
35	P49825:FTSH_ODOSI Cell division protease ftsH homolog - Odontell...	52	9e-06
36	O19922:FTSH_CYACA Cell division protease ftsH homolog - Cyanidiu...	52	9e-06
37	Q39444:FTSH_CAPAN Cell division protease ftsH homolog, chloropla...	52	9e-06
38	P94304:FTSH_BACPF Cell division protease ftsH homolog - Bacillus...	52	9e-06
39	Q39102:FTSH1_ARATH Cell division protease ftsH homolog 1, chloro...	52	9e-06
40	Q1XDF9:FSTH_PORYE Cell division protease ftsH homolog - Porphyra...	52	9e-06
41	P39925:AFG3_YEAST Mitochondrial respiratory chain complexes asse...	52	9e-06
42	Q58556:Y1156_METJA Cell division cycle protein 48 homolog MJ1156...	52	1e-05
43	Q8TX03:PSMR_METKA Proteasome-activating nucleotidase - Methanopy...	52	1e-05
44	Q01939:PRS8_YEAST 26S protease regulatory subunit 8 homolog - Sa...	52	1e-05
45	O17071:PRS10_CAEEL Probable 26S protease regulatory subunit S10B...	52	1e-05
46	P73179:FTSH2_SYNY3 Cell division protease ftsH homolog 2 - Synec...	52	1e-05
47	Q07590:SAV_SULAC Protein SAV - Sulfolobus acidocaldarius	51	1e-05
48	Q6LWR0:PSMR_METMP Proteasome-activating nucleotidase - Methanoco...	51	1e-05
49	P25694:CDC48_YEAST Cell division control protein 48 - Saccharomy...	51	1e-05
50	Q25544:PRS8_NAEFO 26S protease regulatory subunit 8 homolog - Na...	51	2e-05
51	O23894:PRS6A_BRACM 26S protease regulatory subunit 6A homolog - ...	51	2e-05
52	O16368:PRS4_CAEEL Probable 26S protease regulatory subunit 4 - C...	51	2e-05
53	O83746:FTSH_TREPA Cell division protease ftsH homolog - Treponem...	50	2e-05
54	P59652:FTSH_STRR6 Cell division protease ftsH homolog - Streptoc...	50	2e-05
55	O69076:FTSH_STRPN Cell division protease ftsH homolog - Streptoc...	50	2e-05
56	O88967:YMEL1_MOUSE ATP-dependent metalloprotease YME1L1 - Mus mu...	50	3e-05
57	P23787:TERA_XENLA Transitional endoplasmic reticulum ATPase - Xe...	50	3e-05
58	P34124:PRS8_DICDI 26S protease regulatory subunit 8 - Dictyostel...	50	3e-05
59	Q9TJ83:FTSH_CYAME Cell division protease ftsH homolog - Cyanidio...	50	3e-05
60	Q9P3A7:CDC48_SCHPO Cell division cycle protein 48 - Schizosaccha...	50	3e-05
61	Q96TA2:YMEL1_HUMAN ATP-dependent metalloprotease YME1L1 - Homo s...	50	4e-05
62	Q975U2:PSMR_SULTO Proteasome-activating nucleotidase - Sulfolobu...	50	4e-05
63	P51327:FTSH_PORPU Cell division protease ftsH homolog - Porphyra...	50	4e-05
64	O78516:FTSH_GUITH Cell division protease ftsH homolog - Guillard...	50	4e-05
65	P54774:CDC48_SOYBN Cell division cycle protein 48 homolog - Glyc...	50	4e-05
66	P32794:AFG2_YEAST Protein AFG2 - Saccharomyces cerevisiae (Baker...	50	4e-05
67	P54813:YME1_CAEEL Protein YME1 homolog - Caenorhabditis elegans	49	6e-05
68	O05209:VAT_THEAC VCP-like ATPase - Thermoplasma acidophilum	49	6e-05
69	P46462:TERA_RAT Transitional endoplasmic reticulum ATPase - Ratt...	49	6e-05
70	P03974:TERA_PIG Transitional endoplasmic reticulum ATPase - Sus ...	49	6e-05
71	Q01853:TERA_MOUSE Transitional endoplasmic reticulum ATPase - Mu...	49	6e-05
72	P55072:TERA_HUMAN Transitional endoplasmic reticulum ATPase - Ho...	49	6e-05
73	Q3ZBT1:TERA_BOVIN Transitional endoplasmic reticulum ATPase - Bo...	49	6e-05
74	P54776:PRS6A_SOLLC 26S protease regulatory subunit 6A homolog - ...	49	6e-05
75	Q8K9G8:FTSH_BUCAP Cell division protease ftsH - Buchnera aphidic...	49	6e-05
76	Q55700:FTSH1_SYNY3 Cell division protease ftsH homolog 1 - Synec...	49	6e-05
77	Q925S8:YMEL1_RAT ATP-dependent metalloprotease YME1L1 - Rattus n...	49	7e-05
78	P57462:FTSH_BUCAI Cell division protease ftsH - Buchnera aphidic...	49	7e-05
79	O26824:PSMR_METTH Proteasome-activating nucleotidase - Methanoba...	49	9e-05
80	Q9LZF6:CD48E_ARATH Cell division control protein 48 homolog E - ...	49	9e-05
81	Q9SCN8:CD48D_ARATH Cell division control protein 48 homolog D - ...	49	9e-05
82	Q9ZPR1:CD48B_ARATH Cell division control protein 48 homolog B - ...	49	9e-05
83	P54609:CD48A_ARATH Cell division control protein 48 homolog A - ...	49	9e-05
84	Q980M1:PSMR_SULSO Proteasome-activating nucleotidase - Sulfolobu...	48	1e-04
85	Q98PE4:FTSH_MYCPU Cell division protease ftsH homolog - Mycoplas...	48	1e-04
86	P37476:FTSH_BACSU Cell division protease ftsH homolog - Bacillus...	48	1e-04
87	Q9HPF0:CDCH_HALSA Protein cdcH - Halobacterium salinarium (Halob...	48	1e-04
88	Q96372:CDC48_CAPAN Cell division cycle protein 48 homolog - Caps...	48	1e-04
89	P46508:YME1_SCHMA Protein YME1 homolog - Schistosoma mansoni (Bl...	48	2e-04
90	P41836:PRS8_SCHPO 26S protease regulatory subunit 8 homolog - Sc...	48	2e-04
91	P54814:PRS8_MANSE 26S protease regulatory subunit 8 - Manduca se...	48	2e-04
92	O18413:PRS8_DROME 26S protease regulatory subunit 8 - Drosophila...	48	2e-04
93	P78578:PRS6B_ASPNG 26S protease regulatory subunit 6B homolog - ...	48	2e-04
94	P46466:PRS4_ORYSJ 26S protease regulatory subunit 4 homolog - Or...	48	2e-04
95	O15381:NVL_HUMAN Nuclear valosin-containing protein-like - Homo ...	48	2e-04
96	Q89AF2:FTSH_BUCBP Cell division protease ftsH - Buchnera aphidic...	48	2e-04
97	O14126:PRS6A_SCHPO 26S protease regulatory subunit 6A - Schizosa...	47	2e-04
98	Q9DBY8:NVL_MOUSE Nuclear valosin-containing protein-like - Mus m...	47	2e-04
99	P0AAI4:FTSH_SHIFL Cell division protease ftsH - Shigella flexneri	47	2e-04
100	P63343:FTSH_SALTY Cell division protease ftsH - Salmonella typhi...	47	2e-04
101	P63344:FTSH_SALTI Cell division protease ftsH - Salmonella typhi	47	2e-04
102	P0AAI3:FTSH_ECOLI Cell division protease ftsH - Escherichia coli	47	2e-04
103	Q8X9L0:FTSH_ECO57 Cell division protease ftsH - Escherichia coli...	47	2e-04
104	O67077:FTSH_AQUAE Cell division protease ftsH homolog - Aquifex ...	47	2e-04
105	Q68XR9:FTSH_RICTY Cell division protease ftsH homolog - Ricketts...	47	3e-04
106	Q9ZEA2:FTSH_RICPR Cell division protease ftsH homolog - Ricketts...	47	3e-04
107	Q4UN68:FTSH_RICFE Cell division protease ftsH homolog - Ricketts...	47	3e-04
108	Q92JJ9:FTSH_RICCN Cell division protease ftsH homolog - Ricketts...	47	3e-04
109	P54812:TERA2_CAEEL Transitional endoplasmic reticulum ATPase hom...	47	4e-04
110	P33297:PRS6A_YEAST 26S protease regulatory subunit 6A - Saccharo...	47	4e-04
111	Q1RGP0:FTSH_RICBR Cell division protease ftsH homolog - Ricketts...	47	4e-04
112	P72991:FTSH4_SYNY3 Cell division protease ftsH homolog 4 - Synec...	47	4e-04
113	P46468:CDAT_PLAF7 Putative cell division cycle ATPase - Plasmodi...	47	4e-04
114	Q9UQ90:SPG7_HUMAN Paraplegin - Homo sapiens (Human)	46	5e-04
115	P46470:PRS8_XENLA 26S protease regulatory subunit 8 - Xenopus la...	46	5e-04
116	P33298:PRS6B_YEAST 26S protease regulatory subunit 6B homolog - ...	46	5e-04
117	P33299:PRS7_YEAST 26S protease regulatory subunit 7 homolog - Sa...	46	6e-04
118	P53549:PRS10_YEAST 26S protease subunit RPT4 - Saccharomyces cer...	46	6e-04
119	Q8SQI9:PRS6B_ENCCU 26S protease regulatory subunit 6B homolog - ...	45	8e-04
120	P60373:RFCL_NANEQ Replication factor C large subunit - Nanoarcha...	45	0.001
121	P62198:PRS8_RAT 26S protease regulatory subunit 8 - Rattus norve...	45	0.001
122	P62197:PRS8_PIG 26S protease regulatory subunit 8 - Sus scrofa (...	45	0.001
123	P62196:PRS8_MOUSE 26S protease regulatory subunit 8 - Mus muscul...	45	0.001
124	P62195:PRS8_HUMAN 26S protease regulatory subunit 8 - Homo sapie...	45	0.001
125	P62194:PRS8_BOVIN 26S protease regulatory subunit 8 - Bos taurus...	45	0.001
126	Q41365:PRS7_SPIOL 26S protease regulatory subunit 7 - Spinacia o...	45	0.001
127	Q9FXT9:PRS7_ORYSJ 26S protease regulatory subunit 7 - Oryza sati...	45	0.001
128	P62335:PRS10_SPETR 26S protease regulatory subunit S10B - Spermo...	45	0.001
129	P62334:PRS10_MOUSE 26S protease regulatory subunit S10B - Mus mu...	45	0.001
130	P62333:PRS10_HUMAN 26S protease regulatory subunit S10B - Homo s...	45	0.001
131	Q2KIW6:PRS10_BOVIN 26S protease regulatory subunit S10B - Bos ta...	45	0.001
132	Q9MUP8:YCF2_MESVI Protein ycf2 - Mesostigma viride	45	0.001
133	Q58576:PSMR_METJA Proteasome-activating nucleotidase - Methanoco...	45	0.001
134	O28303:PSMR_ARCFU Proteasome-activating nucleotidase - Archaeogl...	45	0.001
135	Q63347:PRS7_RAT 26S protease regulatory subunit 7 - Rattus norve...	45	0.001
136	P40327:PRS4_YEAST 26S protease regulatory subunit 4 homolog - Sa...	45	0.001
137	Q7SGP2:PEX6_NEUCR Peroxisomal biogenesis factor 6 - Neurospora c...	45	0.001
138	P71377:FTSH1_HAEIN Cell division protease ftsH homolog 1 - Haemo...	45	0.001
139	O57940:PSMR_PYRHO Proteasome-activating nucleotidase - Pyrococcu...	44	0.002
140	Q9V287:PSMR_PYRAB Proteasome-activating nucleotidase - Pyrococcu...	44	0.002
141	P46472:PRS7_XENLA 26S protease regulatory subunit 7 - Xenopus la...	44	0.002
142	P46471:PRS7_MOUSE 26S protease regulatory subunit 7 - Mus muscul...	44	0.002
143	Q4R4R0:PRS7_MACFA 26S protease regulatory subunit 7 - Macaca fas...	44	0.002
144	P35998:PRS7_HUMAN 26S protease regulatory subunit 7 - Homo sapie...	44	0.002
145	Q5E9F9:PRS7_BOVIN 26S protease regulatory subunit 7 - Bos taurus...	44	0.002
146	P34123:PRS6B_DICDI 26S protease regulatory subunit 6B homolog - ...	44	0.002
147	Q6PL18:ATAD2_HUMAN ATPase family AAA domain-containing protein 2...	44	0.002
148	Q8U4H3:PSMR_PYRFU Proteasome-activating nucleotidase - Pyrococcu...	44	0.002
149	Q63569:PRS6A_RAT 26S protease regulatory subunit 6A - Rattus nor...	44	0.002
150	O88685:PRS6A_MOUSE 26S protease regulatory subunit 6A - Mus musc...	44	0.002
151	P17980:PRS6A_HUMAN 26S protease regulatory subunit 6A - Homo sap...	44	0.002
152	O42586:PR6AB_XENLA 26S protease regulatory subunit 6A-B - Xenopu...	44	0.002
153	Q5RDX4:ATAD2_PONPY ATPase family AAA domain-containing protein 2...	44	0.002
154	O74894:PRS6B_SCHPO 26S protease regulatory subunit 6B homolog - ...	44	0.003
155	O42587:PR6AA_XENLA 26S protease regulatory subunit 6A-A - Xenopu...	44	0.003
156	O64982:PRS7_PRUPE 26S protease regulatory subunit 7 - Prunus per...	43	0.004
157	Q5R8D7:PRS7_PONPY 26S protease regulatory subunit 7 - Pongo pygm...	43	0.004
158	Q9SSB5:PRS7_ARATH 26S protease regulatory subunit 7 - Arabidopsi...	43	0.004
159	Q9C1E9:PEX6_GLOLA Peroxisomal biogenesis factor 6 - Glomerella l...	43	0.004
160	P54811:TERA1_CAEEL Transitional endoplasmic reticulum ATPase hom...	43	0.005
161	Q18787:PRS7_CAEEL Probable 26S protease regulatory subunit 7 - C...	43	0.005
162	P54778:PRS6B_SOLTU 26S protease regulatory subunit 6B homolog - ...	43	0.005
163	Q9SEI4:PRS6B_ARATH 26S protease regulatory subunit 6B homolog - ...	43	0.005
164	Q8CDM1:ATAD2_MOUSE ATPase family AAA domain-containing protein 2...	42	0.007
165	P46502:PRS6B_CAEEL Probable 26S protease regulatory subunit 6B -...	42	0.009
166	Q9ULI0:ATD2B_HUMAN ATPase family AAA domain-containing protein 2...	42	0.009
167	Q975D4:RFCL_SULTO Replication factor C large subunit - Sulfolobu...	42	0.012
168	P36612:PRS4_SCHPO 26S protease regulatory subunit 4 homolog - Sc...	42	0.012
169	Q9HNP9:PSMR1_HALSA Proteasome-activating nucleotidase 1 - Haloba...	41	0.015
170	O42931:PRS7_SCHPO 26S protease regulatory subunit 7 homolog - Sc...	41	0.015
171	P46507:PRS6B_MANSE 26S protease regulatory subunit 6B - Manduca ...	41	0.020
172	Q9UVU5:PEX6_PICAN Peroxisomal biogenesis factor 6 - Pichia angus...	41	0.020
173	Q9SS94:CD48C_ARATH Cell division control protein 48 homolog C - ...	41	0.020
174	Q8TZC5:RFCL_METKA Replication factor C large subunit - Methanopy...	40	0.026
175	Q9YBS5:RFCL_AERPE Replication factor C large subunit - Aeropyrum...	40	0.026
176	Q5JHS5:PSMR_PYRKO Proteasome-activating nucleotidase - Pyrococcu...	40	0.026
177	P40340:TBP7_YEAST TAT-binding homolog 7 - Saccharomyces cerevisi...	40	0.034
178	A1RWU6:RFCL_THEPD Replication factor C large subunit - Thermofil...	40	0.034
179	Q8PY58:PSMR_METMA Proteasome-activating nucleotidase - Methanosa...	40	0.034
180	Q63570:PRS6B_RAT 26S protease regulatory subunit 6B - Rattus nor...	40	0.034
181	P54775:PRS6B_MOUSE 26S protease regulatory subunit 6B - Mus musc...	40	0.034
182	Q4R7L3:PRS6B_MACFA 26S protease regulatory subunit 6B - Macaca f...	40	0.034
183	P43686:PRS6B_HUMAN 26S protease regulatory subunit 6B - Homo sap...	40	0.034
184	Q3T030:PRS6B_BOVIN 26S protease regulatory subunit 6B - Bos taur...	40	0.034
185	Q94392:NSF_CAEEL Vesicle-fusing ATPase - Caenorhabditis elegans	40	0.034
186	Q07844:RIX7_YEAST Ribosome biogenesis ATPase RIX7 - Saccharomyce...	40	0.044
187	Q9HG03:PEX6_PENCH Peroxisomal biogenesis factor 6 - Penicillium ...	39	0.057
188	Q8JZQ2:AFG32_MOUSE AFG3-like protein 2 - Mus musculus (Mouse)	39	0.057
189	Q9Y4W6:AFG32_HUMAN AFG3-like protein 2 - Homo sapiens (Human)	39	0.057
190	Q6M0E9:RFCL_METMP Replication factor C large subunit - Methanoco...	39	0.075
191	Q8TI88:PSMR_METAC Proteasome-activating nucleotidase - Methanosa...	39	0.075
192	P54351:NSF2_DROME Vesicular-fusion protein Nsf2 - Drosophila mel...	39	0.075
193	P46461:NSF1_DROME Vesicular-fusion protein Nsf1 - Drosophila mel...	39	0.075
194	Q2KJI7:AFG32_BOVIN AFG3-like protein 2 - Bos taurus (Bovine)	39	0.075
195	Q09803:VPS4_SCHPO Suppressor protein of bem1/bed5 double mutants...	39	0.098
196	O13764:PEX6_SCHPO Peroxisomal biogenesis factor 6 - Schizosaccha...	39	0.098
197	Q9P7Q4:SEC18_SCHPO Vesicular-fusion protein SEC18 homolog - Schi...	38	0.13
198	Q8ZYK3:RFCL_PYRAE Replication factor C large subunit - Pyrobacul...	38	0.13
199	Q0W3P4:RFCL_UNCMA Replication factor C large subunit - Unculture...	38	0.17
200	A1RSA3:RFCL_PYRIL Replication factor C large subunit - Pyrobacul...	38	0.17
201	P38630:RFC1_YEAST Replication factor C subunit 1 - Saccharomyces...	38	0.17
202	Q920A7:AFG31_MOUSE AFG3-like protein 1 - Mus musculus (Mouse)	38	0.17
203	Q8DGR1:RUVB_SYNEL Holliday junction ATP-dependent DNA helicase r...	37	0.22
204	Q58294:RFCL_METJA Replication factor C large subunit - Methanoco...	37	0.28
205	O43933:PEX1_HUMAN Peroxisome biogenesis factor 1 - Homo sapiens ...	37	0.28
206	O29072:RFCL_ARCFU Replication factor C large subunit - Archaeogl...	37	0.37
207	P33760:PEX6_YEAST Peroxisomal biogenesis factor 6 - Saccharomyce...	37	0.37
208	P46509:Y1316_MYCLE Uncharacterized AAA-family ATPase ML1316 - My...	36	0.49
209	Q9HLX6:LONH2_THEAC Putative protease La homolog type 2 - Thermop...	36	0.49
210	Q67Q97:RUVB_SYMTH Holliday junction ATP-dependent DNA helicase r...	36	0.63
211	Q65GP6:RUVB_BACLD Holliday junction DNA helicase ruvB - Bacillus...	36	0.63
212	Q8ZWS2:RFCS2_PYRAE Replication factor C small subunit 2 - Pyroba...	36	0.63
213	Q8ZYK4:RFCS1_PYRAE Replication factor C small subunit 1 - Pyroba...	36	0.63
214	Q503W7:ATD1B_DANRE ATPase family AAA domain-containing protein 1...	36	0.63
215	P63346:Y2139_MYCBO Uncharacterized AAA-family ATPase Mb2139c - M...	35	0.83
216	P63345:Y2115_MYCTU Uncharacterized AAA-family ATPase Rv2115c/MT2...	35	0.83
217	A1RV38:RFCS2_PYRIL Replication factor C small subunit 2 - Pyroba...	35	0.83
218	A1RSA2:RFCS1_PYRIL Replication factor C small subunit 1 - Pyroba...	35	0.83
219	Q3ISA5:RFCL_NATPD Replication factor C large subunit - Natronomo...	35	0.83
220	A0B6D7:RFCL_METTP Replication factor C large subunit - Methanosa...	35	0.83
221	P38629:RFC3_YEAST Replication factor C subunit 3 - Saccharomyces...	35	0.83
222	O74111:RFC3_ARXAD Replication factor C subunit 3 - Arxula adenin...	35	0.83
223	O61577:KTNA1_STRPU Katanin p60 ATPase-containing subunit - Stron...	35	0.83
224	Q9SEX2:KTNA1_ARATH Katanin p60 ATPase-containing subunit - Arabi...	35	0.83
225	Q9PQX0:Y173_UREPA Uncharacterized protein UU173 - Ureaplasma par...	35	1.1
226	Q5WHR5:RUVB_BACSK Holliday junction ATP-dependent DNA helicase r...	35	1.1
227	Q4JAB1:RFCL_SULAC Replication factor C large subunit - Sulfolobu...	35	1.1
228	O57853:RFCL_PYRHO Replication factor C large subunit - Pyrococcu...	35	1.1
229	Q6L0P4:RFCL_PICTO Replication factor C large subunit - Picrophil...	35	1.1
230	Q12TX1:RFCL_METBU Replication factor C large subunit - Methanoco...	35	1.1
231	Q8VEJ9:VPS4A_MOUSE Vacuolar protein sorting-associating protein ...	35	1.4
232	Q9UN37:VPS4A_HUMAN Vacuolar protein sorting-associating protein ...	35	1.4
233	Q5XHZ9:TRP13_RAT Thyroid receptor-interacting protein 13 - Rattu...	35	1.4
234	Q3UA06:TRP13_MOUSE Thyroid receptor-interacting protein 13 - Mus...	35	1.4
235	Q15645:TRP13_HUMAN Thyroid receptor-interacting protein 13 - Hom...	35	1.4
236	A2SQR6:RFCL_METLZ Replication factor C large subunit - Methanoco...	35	1.4
237	P35251:RFC1_HUMAN Replication factor C subunit 1 - Homo sapiens ...	35	1.4
238	Q9NU22:MDN1_HUMAN Midasin - Homo sapiens (Human)	35	1.4
239	Q5XIK7:KATL1_RAT Katanin p60 ATPase-containing subunit A-like 1 ...	35	1.4
240	Q8K0T4:KATL1_MOUSE Katanin p60 ATPase-containing subunit A-like ...	35	1.4
241	Q9BW62:KATL1_HUMAN Katanin p60 ATPase-containing subunit A-like ...	35	1.4
242	Q3B0J1:RUVB_SYNS9 Holliday junction ATP-dependent DNA helicase r...	34	1.8
243	Q4A9R6:RUVB_MYCHJ Holliday junction ATP-dependent DNA helicase r...	34	1.8
244	Q4A7W4:RUVB_MYCH7 Holliday junction ATP-dependent DNA helicase r...	34	1.8
245	Q600N3:RUVB_MYCH2 Holliday junction ATP-dependent DNA helicase r...	34	1.8
246	Q839T5:RUVB_ENTFA Holliday junction ATP-dependent DNA helicase r...	34	1.8
247	Q9HIP7:RFCL_THEAC Replication factor C large subunit - Thermopla...	34	1.8
248	P35601:RFC1_MOUSE Replication factor C subunit 1 - Mus musculus ...	34	1.8
249	P46467:VPS4B_MOUSE Vacuolar protein sorting-associating protein ...	34	2.4
250	O75351:VPS4B_HUMAN Vacuolar protein sorting-associating protein ...	34	2.4
251	P40328:TBP6_YEAST Probable 26S protease subunit YTA6 - Saccharom...	34	2.4
252	P18759:SEC18_YEAST Vesicular-fusion protein SEC18 - Saccharomyce...	34	2.4
253	Q7U9W7:RUVB_SYNPX Holliday junction ATP-dependent DNA helicase r...	34	2.4
254	Q7V910:RUVB_PROMM Holliday junction ATP-dependent DNA helicase r...	34	2.4
255	Q38YQ9:RUVB_LACSS Holliday junction ATP-dependent DNA helicase r...	34	2.4
256	Q88V03:RUVB_LACPL Holliday junction ATP-dependent DNA helicase r...	34	2.4
257	Q3ABY0:RUVB_CARHZ Holliday junction ATP-dependent DNA helicase r...	34	2.4
258	Q9UXF5:RFCS_SULSO Replication factor C small subunit - Sulfolobu...	34	2.4
259	Q8Q084:RFCL_METMA Replication factor C large subunit - Methanosa...	34	2.4
260	A2BL93:RFCL_HYPBU Replication factor C large subunit - Hyperther...	34	2.4
261	P58275:LONH2_THEVO Putative protease La homolog type 2 - Thermop...	34	2.4
262	O26978:LONH2_METTH Putative protease La homolog type 2 - Methano...	34	2.4
263	Q72H89:GIDB_THET2 Methyltransferase gidB - Thermus thermophilus ...	33	3.1
264	Q9BTK6:CP053_HUMAN Uncharacterized protein C16orf53 - Homo sapie...	33	3.1
265	P39955:SAP1_YEAST Protein SAP1 - Saccharomyces cerevisiae (Baker...	33	3.1
266	Q8E2D9:RUVB_STRA5 Holliday junction ATP-dependent DNA helicase r...	33	3.1
267	Q8E7U6:RUVB_STRA3 Holliday junction ATP-dependent DNA helicase r...	33	3.1
268	Q3K3X8:RUVB_STRA1 Holliday junction ATP-dependent DNA helicase r...	33	3.1
269	Q46IJ6:RUVB_PROMT Holliday junction ATP-dependent DNA helicase r...	33	3.1
270	Q9UWR2:RFCL_PYRFU Replication factor C large subunit - Pyrococcu...	33	3.1
271	Q9V2G3:RFCL_PYRAB Replication factor C large subunit - Pyrococcu...	33	3.1
272	Q46AT6:RFCL_METBF Replication factor C large subunit - Methanosa...	33	3.1
273	P34429:RFC5_CAEEL Putative replication factor C subunit 5 - Caen...	33	3.1
274	Q8GU89:PDR4_ORYSJ Pleiotropic drug resistance protein 4 - Oryza ...	33	3.1
275	Q9PUL2:KTNA1_XENLA Katanin p60 ATPase-containing subunit - Xenop...	33	3.1
276	Q8R7X4:KAD_THETN Adenylate kinase - Thermoanaerobacter tengconge...	33	3.1
277	Q8NDF8:PAPD5_HUMAN PAP-associated domain-containing protein 5 - ...	33	4.1
278	P0AAZ4:YCAJ_ECOLI Uncharacterized protein ycaJ - Escherichia coli	33	4.1
279	P0AAZ5:YCAJ_ECOL6 Uncharacterized protein ycaJ - Escherichia col...	33	4.1
280	P0AAZ6:YCAJ_ECO57 Uncharacterized protein ycaJ - Escherichia col...	33	4.1
281	Q60560:SMBP2_MESAU DNA-binding protein SMUBP-2 - Mesocricetus au...	33	4.1
282	Q8RAN2:RUVB_THETN Holliday junction ATP-dependent DNA helicase r...	33	4.1
283	P61537:RUVB_THET2 Holliday junction ATP-dependent DNA helicase r...	33	4.1
284	A3CTR4:RFCL_METMJ Replication factor C large subunit - Methanocu...	33	4.1
285	Q8TPU4:RFCL_METAC Replication factor C large subunit - Methanosa...	33	4.1
286	O75449:KTNA1_HUMAN Katanin p60 ATPase-containing subunit A1 - Ho...	33	4.1
287	Q62445:SP4_MOUSE Transcription factor Sp4 - Mus musculus (Mouse)	33	5.4
288	Q02446:SP4_HUMAN Transcription factor Sp4 - Homo sapiens (Human)	33	5.4
289	P52917:VPS4_YEAST Vacuolar protein sorting-associated protein 4 ...	33	5.4
290	O43078:SUR2_SCHPO Protein sur2 - Schizosaccharomyces pombe (Fiss...	33	5.4
291	Q3AND8:RUVB_SYNSC Holliday junction ATP-dependent DNA helicase r...	33	5.4
292	Q2JP68:RUVB_SYNJB Holliday junction ATP-dependent DNA helicase r...	33	5.4
293	Q48VY1:RUVB_STRPM Holliday junction ATP-dependent DNA helicase r...	33	5.4
294	Q8P302:RUVB_STRP8 Holliday junction ATP-dependent DNA helicase r...	33	5.4
295	Q5XEE4:RUVB_STRP6 Holliday junction ATP-dependent DNA helicase r...	33	5.4
296	Q8K8X8:RUVB_STRP3 Holliday junction ATP-dependent DNA helicase r...	33	5.4
297	Q9A1Y1:RUVB_STRP1 Holliday junction ATP-dependent DNA helicase r...	33	5.4
298	Q2JTM7:RUVB1_SYNJA Holliday junction ATP-dependent DNA helicase ...	33	5.4
299	Q4JAB0:RFCS_SULAC Replication factor C small subunit - Sulfolobu...	33	5.4
300	Q9UXF6:RFCL_SULSO Replication factor C large subunit - Sulfolobu...	33	5.4
301	O26342:RFCL_METTH Replication factor C large subunit - Methanoba...	33	5.4
302	O14003:RFC3_SCHPO Replication factor C subunit 3 - Schizosacchar...	33	5.4
303	Q13608:PEX6_HUMAN Peroxisome assembly factor 2 - Homo sapiens (H...	33	5.4
304	O26878:LONH1_METTH Putative protease La homolog type 1 - Methano...	33	5.4
305	O51558:LON2_BORBU ATP-dependent protease La homolog - Borrelia b...	33	5.4
306	Q62967:ERG19_RAT Diphosphomevalonate decarboxylase - Rattus norv...	32	7.0
307	Q5RBH3:CS021_PONPY Uncharacterized protein C19orf21 homolog - Po...	32	7.0
308	Q58928:Y1533_METJA KH domain-containing protein MJ1533 - Methano...	32	7.0
309	Q8CWU7:RUVB_STRR6 Holliday junction ATP-dependent DNA helicase r...	32	7.0
310	Q8EPQ6:RUVB_OCEIH Holliday junction ATP-dependent DNA helicase r...	32	7.0
311	Q9CDL3:RUVB_LACLA Holliday junction ATP-dependent DNA helicase r...	32	7.0
312	P61533:RUVB_LACJO Holliday junction ATP-dependent DNA helicase r...	32	7.0
313	Q2SCL3:RUVB_HAHCH Holliday junction ATP-dependent DNA helicase r...	32	7.0
314	Q3MEF4:RUVB_ANAVT Holliday junction ATP-dependent DNA helicase r...	32	7.0
315	Q8YT32:RUVB_ANASP Holliday junction ATP-dependent DNA helicase r...	32	7.0
316	Q59622:RPOB_NEIMB DNA-directed RNA polymerase beta chain - Neiss...	32	7.0
317	P57009:RPOB_NEIMA DNA-directed RNA polymerase beta chain - Neiss...	32	7.0
318	Q5F5R5:RPOB_NEIG1 DNA-directed RNA polymerase beta chain - Neiss...	32	7.0
319	Q9YBS7:RFCS_AERPE Replication factor C small subunit - Aeropyrum...	32	7.0
320	Q5JHP1:RFCL_PYRKO Replication factor C large subunit - Pyrococcu...	32	7.0
321	P54815:MSP1_CAEEL Protein MSP1 homolog - Caenorhabditis elegans	32	7.0
322	P47481:LON_MYCGE ATP-dependent protease La - Mycoplasma genitalium	32	7.0
323	Q6E0V2:KTNA1_RAT Katanin p60 ATPase-containing subunit A1 - Ratt...	32	7.0
324	Q9WV86:KTNA1_MOUSE Katanin p60 ATPase-containing subunit A1 - Mu...	32	7.0
325	P08472:M130_STRPU Mesenchyme-specific cell surface glycoprotein ...	32	9.1
326	Q9LCY2:GIDB_THET8 Methyltransferase gidB - Thermus thermophilus ...	32	9.1
327	Q59056:Y1662_METJA Uncharacterized ABC transporter ATP-binding p...	32	9.2
328	Q87D00:RUVB_XYLFT Holliday junction ATP-dependent DNA helicase r...	32	9.2
329	Q9PC79:RUVB_XYLFA Holliday junction ATP-dependent DNA helicase r...	32	9.2
330	Q92BI2:RUVB_LISIN Holliday junction ATP-dependent DNA helicase r...	32	9.2
331	Q5QYU5:RUVB_IDILO Holliday junction ATP-dependent DNA helicase r...	32	9.2
332	Q7NGP9:RUVB_GLOVI Holliday junction ATP-dependent DNA helicase r...	32	9.2
333	Q7VTT6:RUVB_BORPE Holliday junction ATP-dependent DNA helicase r...	32	9.2
334	Q7W4T6:RUVB_BORPA Holliday junction ATP-dependent DNA helicase r...	32	9.2
335	Q7WGB3:RUVB_BORBR Holliday junction ATP-dependent DNA helicase r...	32	9.2
336	Q2JTJ1:RUVB2_SYNJA Holliday junction ATP-dependent DNA helicase ...	32	9.2
337	P27409:POLN_FCVF9 Non-structural polyprotein [Contains: p5.6; p3...	32	9.2
338	P27407:POLN_FCVC6 Non-structural polyprotein [Contains: p5.6; p3...	32	9.2
339	Q7PC88:PDR3_ARATH Probable pleiotropic drug resistance protein 3...	32	9.2
340	Q39565:DYHB_CHLRE Dynein beta chain, flagellar outer arm - Chlam...	32	9.2
341	Q8TUI2:CDC62_METAC Cell division control protein 6 homolog 2 - M...	32	9.2

---

>Q9P6Q3:BCS1_SCHPO Probable mitochondrial chaperone BCS1 - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 449
 Score =  109 bits (272), Expect = 5e-23
 Identities = 96/347 (27%), Positives = 154/347 (44%), Gaps = 34/347 (9%)
 Frame = +1

Query: 436  KQSKANVISLYPGQDE------RRFYRVVFHRRNRDLVVDSYLPFVLGEGRAVTVKNRQR 597
            KQ    + SL PG  +      + + +V   R NR   + +  P+   E   +T  +R R
Sbjct: 107  KQVANRIFSLVPGPGKHYIKYKKCWIQVERERSNRLQDLTTGTPW---ETITLTTLSRDR 163

Query: 598  RLFTN----------NASRNSNPYRSNSVWSHVPFEHPAT---FDTLAMHPDEKEAVVDE 738
             +F+           +A +N     +       PF HP +     ++ +  + K+ + D+
Sbjct: 164  GIFSELLLEAQKFMQSAQKNKTTIYTAWATEWKPFGHPRSKRMLSSVVLESNVKKMITDD 223

Query: 739  LMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTE 918
            +  F  +  +Y   G  ++RGYLLYGPPG+GK++ + A+A  LDYD+  L L A K  T+
Sbjct: 224  VHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNL-AEKGLTD 282

Query: 919  --LRKLFIETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 1092
              L  L      K+++++ED+D +                                    
Sbjct: 283  DRLNHLLSNVPPKAVVLLEDVDSAFQ-----------------------GRERSGEVGFH 319

Query: 1093 TKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMD----------KHIE 1242
              VT SGLLN +DG+ S+   ERII  TTNH EKLDPAL+R GR+D          + + 
Sbjct: 320  ANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVR 377

Query: 1243 MSYCRFEGFK-VLAKNYLDVI--EHELFGEIQQLLDETDMSPADVAE 1374
              + RF G    +A +  D++  ++     +Q L      SPAD  +
Sbjct: 378  EMFTRFYGHSPEMADDLSDIVCPKNTSMASLQGLFVMNKSSPADAVD 424

---

>P32839:BCS1_YEAST Mitochondrial chaperone BCS1 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 456

 Score = 93.2 bits (230), Expect = 3e-18
 Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
 Frame = +1

Query: 718  KEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELT 897
            KE ++D++  F ++  +Y+  G  ++RGYLLYGPPG+GK++ I A+A  LDY++  L L+
Sbjct: 235  KEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLS 294

Query: 898  AVKNN---TELRKLFIETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXX 1068
              +NN     L  L      +SI+++EDID + +                          
Sbjct: 295  --ENNLTDDRLNHLMNNMPERSILLLEDIDAAFN-----------------------KRS 329

Query: 1069 XXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMD 1230
                    + VT SGLLN +DG+ S+   E I   TTNH EKLD A++R GR+D
Sbjct: 330  QTGEQGFHSSVTFSGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRID 381

---

>Q7ZTL7:BCS1_XENLA Mitochondrial chaperone BCS1 - Xenopus laevis (African clawed frog)|
          Length = 419

 Score = 92.8 bits (229), Expect = 4e-18
 Identities = 77/249 (30%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELT- 897
            E +V ++  F E+  +Y+  G  ++RGYLLYGPPG GKS+ I A+A  L+Y +  + L+ 
Sbjct: 199  EKIVQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSD 258

Query: 898  AVKNNTELRKLFIETTGKSIIVIEDIDC---SVDLTXXXXXXXXXXXXXXXXXXXXXXXX 1068
            +  ++  L  L      +SII++ED+D    S DL                         
Sbjct: 259  SSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRDLNKQNPTAYQGMG------------- 305

Query: 1069 XXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMS 1248
                     ++T SGLLN +DG+  A    RI+  TTNH ++LDPALIR GR+D    + 
Sbjct: 306  ---------RLTFSGLLNALDGV--ASTEARIVFMTTNHIDRLDPALIRPGRVDVKQYVG 354

Query: 1249 YC-RFEGFKVLAKNYLDVIEHELFGEIQQLLDETD-MSPADVAENLMPMSKKKKRDPD-- 1416
            +C  ++  ++  + Y D    +        L  +D +S A V  + M      K DPD  
Sbjct: 355  HCTNWQLSQMFLRFYPDQTAGQSEAFASAALSSSDKISAAQVQGHFM----MHKTDPDGA 410

Query: 1417 ---VCLTCL 1434
               VCL  +
Sbjct: 411  IQNVCLATM 419

---

>Q7ZV60:BCS1_DANRE Mitochondrial chaperone BCS1 - Danio rerio (Zebrafish) (Brachydanio|
            rerio)
          Length = 420

 Score = 91.7 bits (226), Expect = 1e-17
 Identities = 79/284 (27%), Positives = 122/284 (42%), Gaps = 7/284 (2%)
 Frame = +1

Query: 553  VLGEGRAVTVKNRQRRLFTNNASRNSNPYRSNSVWSHVPFEHPAT---FDTLAMHPDEKE 723
            +L E R + +K  + R     A          + W   PF  P       ++ +     E
Sbjct: 150  ILQEARELALKQEEGRTVMYTAM--------GAEWR--PFGFPRRRRPLSSVVLESGVAE 199

Query: 724  AVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELT-A 900
             +VD++  F  +  +Y   G  ++RGYLLYGPPG GKS+ I A+A  L Y +  + L+  
Sbjct: 200  RIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDR 259

Query: 901  VKNNTELRKLFIETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1080
              ++  L  L      +SII++ED+D +                                
Sbjct: 260  SLSDDRLNHLLSVAPQQSIILLEDVDAA------------------FVSRELLPTENPLA 301

Query: 1081 XXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRF 1260
                 ++T SGLLN +DG+  A    RI+  TTN  E+LDPAL+R GR+D    + +C  
Sbjct: 302  YQGMGRLTFSGLLNALDGV--ASSEARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCSH 359

Query: 1261 EGFKVLAKNYL---DVIEHELFGEIQQLLDETDMSPADVAENLM 1383
                 + + +       E + F E Q L   TD+S A V  + M
Sbjct: 360  WQLTQMFRRFYPQESAAEADHFSE-QALAAHTDLSAAQVQGHFM 402

---

>Q9Y276:BCS1_HUMAN Mitochondrial chaperone BCS1 - Homo sapiens (Human)|
          Length = 419

 Score = 91.3 bits (225), Expect = 1e-17
 Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
 Frame = +1

Query: 667  PFEHPAT---FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKS 837
            PF +P      +++ +     + +V ++  F ++  +Y   G  ++RGYLLYGPPG GKS
Sbjct: 178  PFGYPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKS 237

Query: 838  TMIAAMAYFLDYDVYDLELT-AVKNNTELRKLFIETTGKSIIVIEDIDC---SVDLTXXX 1005
            + I A+A  L++ +  L LT +  ++  L  L      +S++++ED+D    S DL    
Sbjct: 238  SFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVEN 297

Query: 1006 XXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNH 1185
                                          ++T SGLLN +DG+  A    RI+  TTNH
Sbjct: 298  PVKYQGLG----------------------RLTFSGLLNALDGV--ASTEARIVFMTTNH 333

Query: 1186 KEKLDPALIRRGRMDKHIEMSYC 1254
             ++LDPALIR GR+D    + YC
Sbjct: 334  VDRLDPALIRPGRVDLKEYVGYC 356

---

>Q5E9H5:BCS1_BOVIN Mitochondrial chaperone BCS1 - Bos taurus (Bovine)|
          Length = 419

 Score = 89.7 bits (221), Expect = 4e-17
 Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
 Frame = +1

Query: 667  PFEHPAT---FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKS 837
            PF +P      +++ +     E +V ++  F ++  +Y   G  ++RGYLLYGPPG GKS
Sbjct: 178  PFGYPRRRRPLNSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKS 237

Query: 838  TMIAAMAYFLDYDVYDLELT-AVKNNTELRKLFIETTGKSIIVIEDIDC---SVDLTXXX 1005
            + I A+A  L + +  L LT +  ++  L  L      +S++++ED+D    S DL    
Sbjct: 238  SFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAEN 297

Query: 1006 XXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNH 1185
                                          ++T SGLLN +DG+  A    RI+  TTNH
Sbjct: 298  PIKYQGLG----------------------RLTFSGLLNALDGV--ASTEARIVFMTTNH 333

Query: 1186 KEKLDPALIRRGRMDKHIEMSYC 1254
             ++LDPALIR GR+D    + +C
Sbjct: 334  IDRLDPALIRPGRVDMKEYVGHC 356

---

>Q9CZP5:BCS1_MOUSE Mitochondrial chaperone BCS1 - Mus musculus (Mouse)|
          Length = 418

 Score = 89.0 bits (219), Expect = 6e-17
 Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
 Frame = +1

Query: 691  DTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD 870
            D++ +     + +V ++  F ++  +Y   G  ++RGYLLYGPPG GKS+ I A+A  L+
Sbjct: 189  DSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELE 248

Query: 871  YDVYDLELT-AVKNNTELRKLFIETTGKSIIVIEDIDC---SVDLTXXXXXXXXXXXXXX 1038
            + +  L LT +  ++  L  L      +S++++ED+D    S DL               
Sbjct: 249  HSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPIKYQGLG--- 305

Query: 1039 XXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRR 1218
                               ++T SGLLN +DG+  A    RI+  TTN+ ++LDPALIR 
Sbjct: 306  -------------------RLTFSGLLNALDGV--ASTEARIVFMTTNYIDRLDPALIRP 344

Query: 1219 GRMDKHIEMSYC 1254
            GR+D    + YC
Sbjct: 345  GRVDLKEYVGYC 356

---

>Q5UR45:YL572_MIMIV Putative AAA-family ATPase L572 - Mimivirus|
          Length = 196

 Score = 73.6 bits (179), Expect = 3e-12
 Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
 Frame = +1

Query: 841  MIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGK-SIIVIEDIDCSVDLTXXXXXXX 1017
            MI A++      ++ L L  ++++ EL  L      K +I+V+EDIDC+ +         
Sbjct: 1    MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRAKEE 60

Query: 1018 XXXXXXXXXXXXXXXXXXXXXXXX----ATKVTLSGLLNFIDGLWSACGGERIIIFTTNH 1185
                                         +K+TLSG+LN +DG++++ G  RI+I TTNH
Sbjct: 61   ETVVEKVTDDKSTLENKILADQLKKVEKVSKLTLSGILNSLDGIFNSEG--RIVIMTTNH 118

Query: 1186 KEKLDPALIRRGRMDKHIEMSYC-RFEGFKVLAKNYLDVIEHELFGEIQQLLDETDMSPA 1362
             E LDPALIRRGR+D  IE S C R++    +AK Y +        +I   +     SPA
Sbjct: 119  SEVLDPALIRRGRIDMQIEFSNCDRYQ----IAKMYENFYGKNADSDILSKIPSDIYSPA 174

Query: 1363 DVAENLM 1383
             V+  L+
Sbjct: 175  HVSGLLL 181

---

>O32617:FTSH_HELFE Cell division protease ftsH homolog - Helicobacter felis|
          Length = 638

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
 Frame = +1

Query: 688  FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA--- 858
            F+ +A + + KE VV E++ F +  D YA +G    +G LL GPPGTGK+ +  A+A   
Sbjct: 175  FNDMAGNEEAKEEVV-EIVDFLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKAVAGEA 233

Query: 859  ---YFLDYDVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXX 1023
               +F       +E+      + +R LF   +    SII I++ID               
Sbjct: 234  SVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDA-------------- 279

Query: 1024 XXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDP 1203
                                    + TL+ LL  +DG  S      I++  TN  E LDP
Sbjct: 280  -------IGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSE-NAPVIVLAATNRPEILDP 331

Query: 1204 ALIRRGRMDKHIEMSYCRFEGFKVLAKNYLDVIEHELFGEIQQLLDET-DMSPADVA 1371
            AL+R GR D+ + +    F+G   + K ++  ++     ++Q++   T  ++ AD+A
Sbjct: 332  ALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLA 388

---

>P71408:FTSH_HELPY Cell division protease ftsH homolog - Helicobacter pylori|
            (Campylobacter pylori)
          Length = 632

 Score = 58.5 bits (140), Expect = 9e-08
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
 Frame = +1

Query: 688  FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA--- 858
            F+ +A + + KE VV E++ F +  + YA +G    +G LL GPPGTGK+ +  A+A   
Sbjct: 169  FNDMAGNEEAKEEVV-EIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEA 227

Query: 859  ---YFLDYDVYDLELTAVKNNTELRKLFIETTGK---SIIVIEDIDCSVDLTXXXXXXXX 1020
               +F       +E+      + +R LF ET  K   SII I++ID              
Sbjct: 228  HVPFFSMGGSSFIEMFVGLGASRVRDLF-ETAKKQAPSIIFIDEIDA------------- 273

Query: 1021 XXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLD 1200
                                     + TL+ LL  +DG  S      I++  TN  E LD
Sbjct: 274  --------IGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSE-NAPVIVLAATNRPEILD 324

Query: 1201 PALIRRGRMDKHIEMSYCRFEG 1266
            PAL+R GR D+ + +    F G
Sbjct: 325  PALMRPGRFDRQVLVDKPDFNG 346

---

>Q9ZM66:FTSH_HELPJ Cell division protease ftsH homolog - Helicobacter pylori J99|
            (Campylobacter pylori J99)
          Length = 632

 Score = 58.5 bits (140), Expect = 9e-08
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
 Frame = +1

Query: 688  FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA--- 858
            F+ +A + + KE VV E++ F +  + YA +G    +G LL GPPGTGK+ +  A+A   
Sbjct: 169  FNDMAGNEEAKEEVV-EIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEA 227

Query: 859  ---YFLDYDVYDLELTAVKNNTELRKLFIETTGK---SIIVIEDIDCSVDLTXXXXXXXX 1020
               +F       +E+      + +R LF ET  K   SII I++ID              
Sbjct: 228  HVPFFSMGGSSFIEMFVGLGASRVRDLF-ETAKKQAPSIIFIDEIDA------------- 273

Query: 1021 XXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLD 1200
                                     + TL+ LL  +DG  S      I++  TN  E LD
Sbjct: 274  --------IGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSE-NAPVIVLAATNRPEILD 324

Query: 1201 PALIRRGRMDKHIEMSYCRFEG 1266
            PAL+R GR D+ + +    F G
Sbjct: 325  PALMRPGRFDRQVLVDKPDFNG 346

---

>P73437:FTSH3_SYNY3 Cell division protease ftsH homolog 3 - Synechocystis sp. (strain PCC|
            6803)
          Length = 628

 Score = 58.5 bits (140), Expect = 9e-08
 Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 9/238 (3%)
 Frame = +1

Query: 685  TFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-- 858
            TFD +A   +E +  + E++ F +    Y  +G    +G LL GPPGTGK+ +  A A  
Sbjct: 172  TFDDVA-GVEEAKTELSEVVDFLKFPQRYTALGAKIPKGVLLVGPPGTGKTLLAKAAAGE 230

Query: 859  ----YFLDYDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXX 1020
                +F+      +EL        +R LF +   ++  I+ I+++D              
Sbjct: 231  AGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDA------------- 277

Query: 1021 XXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLD 1200
                                     + TL+ LL  +DG +SA G   I++  TN  E LD
Sbjct: 278  --------IGKSRASGAFMGGNDEREQTLNQLLTEMDG-FSAAGATVIVLAATNRPETLD 328

Query: 1201 PALIRRGRMDKHIEMSYCRFEGFKVLAKNYLDVIEHELFGEIQQLLDET-DMSPADVA 1371
            PAL+R GR D+ + +      G   + + Y   I+ +   E++ +   T   + AD+A
Sbjct: 329  PALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLA 386

---

>Q90732:PRS4_CHICK 26S protease regulatory subunit 4 - Gallus gallus (Chicken)|
          Length = 440

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            +YY ++G    +G +LYGPPGTGK+ +  A+A      FL     +L    + +  +L R
Sbjct: 209  EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   E  G SI+ I++ID                                       +
Sbjct: 269  ELFRVAEEHGPSIVFIDEIDA----------------------IGTKRYDSNSGGEREIQ 306

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  S   G+  +I  TN  E LDPALIR GR+D+ IE
Sbjct: 307  RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352

---

>P40341:RCA1_YEAST Mitochondrial respiratory chain complexes assembly protein RCA1 -|
            Saccharomyces cerevisiae (Baker's yeast)
          Length = 825

 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 9/217 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-------YFLD 870
            DE +  + E ++F +    Y K+G    RG +L GPPGTGK+ +  A A       YF+ 
Sbjct: 354  DEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVS 413

Query: 871  YDVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXX 1044
               + +E+        +R LF        SI+ I++ID                      
Sbjct: 414  GSEF-VEMFVGVGAARVRDLFKTARENAPSIVFIDEIDA--------------------- 451

Query: 1045 XXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGR 1224
                             + TL+ +L  +DG   A     +++  TN  + LD AL+R GR
Sbjct: 452  IGKARQKGNFSGANDERENTLNQMLVEMDGFTPA--DHVVVLAGTNRPDILDKALLRPGR 509

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYLDVIEHELFGEIQQL 1335
             D+HI +     EG K +   +L  +  +L GEI  L
Sbjct: 510  FDRHINIDKPELEGRKAIFAVHLHHL--KLAGEIFDL 544

---

>P32795:YME1_YEAST Protein YME1 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 747

 Score = 55.8 bits (133), Expect = 6e-07
 Identities = 55/206 (26%), Positives = 83/206 (40%), Gaps = 9/206 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-------YFLD 870
            DE  A ++E++ F +    Y  +G    +G LL GPPGTGK+ +  A A       +F+ 
Sbjct: 287  DEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMS 346

Query: 871  YDVYDLELTAVKNNTELRKLFIETTGK--SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXX 1044
               +D E+        +R LF +   +  +II I+++D                      
Sbjct: 347  GSEFD-EVYVGVGAKRIRDLFAQARSRAPAIIFIDELDA--------------------- 384

Query: 1045 XXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGR 1224
                             K TL+ LL  +DG     G   III  TN  E LD AL R GR
Sbjct: 385  ----IGGKRNPKDQAYAKQTLNQLLVELDGFSQTSG--IIIIGATNFPEALDKALTRPGR 438

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYLDVI 1302
             DK + +      G   + K+++  I
Sbjct: 439  FDKVVNVDLPDVRGRADILKHHMKKI 464

---

>P75120:FTSH_MYCPN Cell division protease ftsH homolog - Mycoplasma pneumoniae|
          Length = 709

 Score = 55.5 bits (132), Expect = 8e-07
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 8/195 (4%)
 Frame = +1

Query: 688  FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA--- 858
            FD +A   +EK  ++ E++ + ++   YA++G    RG +LYGPPGTGK+ +  A+A   
Sbjct: 227  FDNIAGLQEEKHELL-EIVDYLKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVAGEA 285

Query: 859  ---YFLDYDVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXX 1023
               +F        ++        +R LF   +     II I++ID               
Sbjct: 286  GVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEID--------------- 330

Query: 1024 XXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDP 1203
                                    + TL+ LL  +DG  S  G   +++  TN  + LD 
Sbjct: 331  -------SVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTG--VVVMAATNRLDVLDD 381

Query: 1204 ALIRRGRMDKHIEMS 1248
            AL+R GR D+HI+++
Sbjct: 382  ALLRPGRFDRHIQIN 396

---

>P62193:PRS4_RAT 26S protease regulatory subunit 4 - Rattus norvegicus (Rat)|
          Length = 440

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            +YY ++G    +G +LYGPPGTGK+ +  A+A      FL     +L    + +  +L R
Sbjct: 209  EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   E    SI+ I++ID                                       +
Sbjct: 269  ELFRVAEEHAPSIVFIDEIDA----------------------IGTKRYDSNSGGEREIQ 306

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  S   G+  +I  TN  E LDPALIR GR+D+ IE
Sbjct: 307  RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352

---

>P62192:PRS4_MOUSE 26S protease regulatory subunit 4 - Mus musculus (Mouse)|
          Length = 440

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            +YY ++G    +G +LYGPPGTGK+ +  A+A      FL     +L    + +  +L R
Sbjct: 209  EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   E    SI+ I++ID                                       +
Sbjct: 269  ELFRVAEEHAPSIVFIDEIDA----------------------IGTKRYDSNSGGEREIQ 306

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  S   G+  +I  TN  E LDPALIR GR+D+ IE
Sbjct: 307  RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352

---

>P62191:PRS4_HUMAN 26S protease regulatory subunit 4 - Homo sapiens (Human)|
          Length = 440

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            +YY ++G    +G +LYGPPGTGK+ +  A+A      FL     +L    + +  +L R
Sbjct: 209  EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   E    SI+ I++ID                                       +
Sbjct: 269  ELFRVAEEHAPSIVFIDEIDA----------------------IGTKRYDSNSGGEREIQ 306

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  S   G+  +I  TN  E LDPALIR GR+D+ IE
Sbjct: 307  RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 352

---

>P48601:PRS4_DROME 26S protease regulatory subunit 4 - Drosophila melanogaster (Fruit|
            fly)
          Length = 439

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            +YY ++G    +G +LYGPPGTGK+ +  A+A      FL     +L    + +  +L R
Sbjct: 208  EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 267

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   E    SI+ I++ID                                       +
Sbjct: 268  ELFRVAEEHAPSIVFIDEIDA----------------------VGTKRYDSNSGGEREIQ 305

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  S   G+  +I  TN  E LDPALIR GR+D+ IE
Sbjct: 306  RTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIE 351

---

>Q5UPR4:YR776_MIMIV Uncharacterized protein R776 - Mimivirus|
          Length = 314

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
 Frame = +1

Query: 643 SNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPP 822
           +N+ WS+     P  F    +   E  +V+ ++  F  ++D Y ++G  ++RG LLYG  
Sbjct: 152 NNNNWSYPIIRRPCKFLDSNL-TTEMRSVLKDVDVFMRNEDTYRELGANYRRGMLLYGES 210

Query: 823 GTGKSTMIAAMAYFLDYDVYDLELTAV-KNNTELRKLFIETTGKSIIVIEDIDCSVD 990
           G GK+ +I+ ++     D Y L L +   +++ L  L      +SI+VIE+ID  ++
Sbjct: 211 GCGKTGLISIISNKYGMDSYILNLNSKDMSDSVLISLASNVKARSILVIEEIDKQIE 267

---

>P46469:FTSH_LACLA Cell division protease ftsH homolog - Lactococcus lactis subsp.|
            lactis (Streptococcus lactis)
          Length = 695

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 12/212 (5%)
 Frame = +1

Query: 688  FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFL 867
            F  +A   +EK+ +V E++ F ++   Y  +G     G LL GPPGTGK+ +  A+A   
Sbjct: 192  FADVAGSEEEKQELV-EVVDFLKNPKKYHDLGARIPAGVLLEGPPGTGKTLLAKAVAGEA 250

Query: 868  DYDVYDL------ELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXX 1023
                Y +      E+      + +R LF   + T  SII I++ID               
Sbjct: 251  GVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDA-------------- 296

Query: 1024 XXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDP 1203
                                    + TL+ LL  +DG +   G   I+I  TN  + LDP
Sbjct: 297  --------VGRQRGAGLGGGNDEREQTLNQLLVEMDG-FQDDGNSVIVIAATNRSDVLDP 347

Query: 1204 ALIRRGRMDKHIEMSYCRFEG----FKVLAKN 1287
            AL+R GR D+ + +     +G     KV AKN
Sbjct: 348  ALLRPGRFDRKVLVGAPDVKGREAVLKVHAKN 379

---

>O74445:PRS10_SCHPO Probable 26S protease subunit rpt4 - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 388

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
 Frame = +1

Query: 754  ESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV--KNNTELRK 927
            ++ + + +VG    +G LLYGPPGTGK+ +  A+A  L  +   +  +A+  K   E  +
Sbjct: 153  KNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESAR 212

Query: 928  LFIETTGKS------IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1089
            +  E  G +      +I +++ID                                     
Sbjct: 213  IIREMFGYAKEHEPCVIFMDEIDA----------------------IGGRRFSEGTSADR 250

Query: 1090 ATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEGF 1269
              + TL  LLN +DG      G+  II  TN  + LDPAL+R GR+D+ IE+      G 
Sbjct: 251  EIQRTLMELLNQMDGFDYL--GQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGR 308

Query: 1270 KVLAKNYLDVIEHELFGEIQQLLDETD 1350
              + K +L+ +  +   + + L+  TD
Sbjct: 309  MEILKIHLEKVSKQGEIDYEALVKLTD 335

---

>Q9FH02:FTSH2_ARATH Cell division protease ftsH homolog 2, chloroplast precursor -|
            Arabidopsis thaliana (Mouse-ear cress)
          Length = 704

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
 Frame = +1

Query: 640  RSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGP 819
            RS S +  VP E   TF  +A   D+ +  + E++ F ++ D Y  +G    +G LL GP
Sbjct: 234  RSKSKFQEVP-ETGVTFGDVA-GADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 291

Query: 820  PGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDI 975
            PGTGK+ +  A+A      +F       +EL      + +R LF +   K+  I+ I++I
Sbjct: 292  PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 351

Query: 976  DCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGG 1155
            D                                       + T++ LL  +DG     G 
Sbjct: 352  DA----------------------VGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSG- 388

Query: 1156 ERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
              I++  TN  + LD AL+R GR D+ +
Sbjct: 389  -VIVLAATNRPDVLDSALLRPGRFDRQV 415

---

>O28972:Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 - Archaeoglobus|
            fulgidus
          Length = 733

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 8/178 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + + ++G    +G LLYGPPGTGK+ +  A+A  +D     +    +      ++   LR
Sbjct: 206  ELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLR 265

Query: 925  KLFIET--TGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            ++F E      SII I++ID                                       +
Sbjct: 266  EIFEEAKENAPSIIFIDEID-------------------------SIAPKREEVTGEVER 300

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEGFK 1272
              ++ LL  +DGL     G+ I+I  TN  + +DPAL R GR D+ IE+     EG K
Sbjct: 301  RVVAQLLALMDGL--EARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRK 356



 Score = 43.5 bits (101), Expect = 0.003
 Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWK----RGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL 888
            E    ELM   E    Y +V +A      RG LL+GPPGTGK+ +  A+A   + +   +
Sbjct: 461  EHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISV 520

Query: 889  ELTAV------KNNTELRKLFIET--TGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXX 1044
            +   +      ++   +R++F +       +I  ++ID                      
Sbjct: 521  KGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAP------------------ 562

Query: 1045 XXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGR 1224
                            T+  +S LL  +DGL      + ++I  TN  + +DPAL+R GR
Sbjct: 563  ------RRGGIGDSHVTERVVSQLLTELDGLEEL--KDVVVIAATNRPDMIDPALLRPGR 614

Query: 1225 MDKHIEM----SYCRFEGFKV 1275
            +++HI +       R E FK+
Sbjct: 615  LERHIYIPPPDKKARVEIFKI 635

---

>O82150:FTSH_TOBAC Cell division protease ftsH homolog, chloroplast precursor -|
            Nicotiana tabacum (Common tobacco)
          Length = 714

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
 Frame = +1

Query: 640  RSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGP 819
            RS S +  VP E   TF  +A   D+ +  + E++ F ++ D Y  +G    +G LL GP
Sbjct: 237  RSKSKFQEVP-ETGVTFADVA-GADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 294

Query: 820  PGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDI 975
            PGTGK+ +  A+A      +F       +EL      + +R LF +   K+  I+ I++I
Sbjct: 295  PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 354

Query: 976  DCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGG 1155
            D                                       + T++ LL  +DG     G 
Sbjct: 355  DA----------------------VGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSG- 391

Query: 1156 ERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
              I++  TN  + LD AL+R GR D+ +
Sbjct: 392  -VIVLAATNRPDVLDSALLRPGRFDRQV 418

---

>P0A4V8:FTSH_MYCTU Cell division protease ftsH homolog - Mycobacterium tuberculosis|
          Length = 760

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 8/187 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE    + E+  F ++   Y  +G    +G LLYGPPGTGK+ +  A+A      +F   
Sbjct: 169  DEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTIS 228

Query: 874  DVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R LF +    S  II +++ID                       
Sbjct: 229  GSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA---------------------- 266

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG     G   I+I  TN  + LDPAL+R GR 
Sbjct: 267  VGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAG--VILIAATNRPDILDPALLRPGRF 324

Query: 1228 DKHIEMS 1248
            D+ I +S
Sbjct: 325  DRQIPVS 331

---

>P0A4V9:FTSH_MYCBO Cell division protease ftsH homolog - Mycobacterium bovis|
          Length = 760

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 8/187 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE    + E+  F ++   Y  +G    +G LLYGPPGTGK+ +  A+A      +F   
Sbjct: 169  DEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTIS 228

Query: 874  DVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R LF +    S  II +++ID                       
Sbjct: 229  GSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA---------------------- 266

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG     G   I+I  TN  + LDPAL+R GR 
Sbjct: 267  VGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAG--VILIAATNRPDILDPALLRPGRF 324

Query: 1228 DKHIEMS 1248
            D+ I +S
Sbjct: 325  DRQIPVS 331

---

>Q9BAE0:FTSH_MEDSA Cell division protease ftsH homolog, chloroplast precursor - Medicago|
            sativa (Alfalfa)
          Length = 706

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
 Frame = +1

Query: 640  RSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGP 819
            RS S +  VP E   TF  +A   D+ +  + E++ F ++ D Y  +G    +G LL GP
Sbjct: 237  RSKSKFQEVP-ETGVTFADVA-GADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 294

Query: 820  PGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDI 975
            PGTGK+ +  A+A      +F       +EL      + +R LF +   K+  I+ I++I
Sbjct: 295  PGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 354

Query: 976  DCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGG 1155
            D                                       + T++ LL  +DG     G 
Sbjct: 355  DA----------------------VGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSG- 391

Query: 1156 ERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
              I++  TN  + LD AL+R GR D+ +
Sbjct: 392  -VIVLAATNRPDVLDSALLRPGRFDRQV 418

---

>P46465:PRS6A_ORYSJ 26S protease regulatory subunit 6A homolog - Oryza sativa subsp.|
            japonica (Rice)
          Length = 429

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 56/186 (30%), Positives = 79/186 (42%), Gaps = 9/186 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAM-----AYFLDYDVYD 885
            + +V+ ++     KD + K+G    +G LLYGPPGTGK+ M  A      A FL      
Sbjct: 186  QELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 245

Query: 886  LELTAVKNNTEL-RKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXX 1056
            L    + +  +L R  F     KS  II I++ID                          
Sbjct: 246  LVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDA----------------------IGT 283

Query: 1057 XXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERI-IIFTTNHKEKLDPALIRRGRMDK 1233
                         + T+  LLN +DG  S    ERI +I  TN  + LDPAL+R GR+D+
Sbjct: 284  KRFDSEVSGDREVQRTMLELLNQLDGFSS---DERIKVIAATNRADILDPALMRSGRLDR 340

Query: 1234 HIEMSY 1251
             IE  +
Sbjct: 341  KIEFPH 346

---

>Q5Z974:FTSH_ORYSJ Cell division protease ftsH homolog, chloroplast precursor - Oryza|
            sativa subsp. japonica (Rice)
          Length = 686

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
 Frame = +1

Query: 640  RSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGP 819
            RS S +  VP E   TF  +A   D+ +  + E++ F ++ D Y  +G    +G LL GP
Sbjct: 216  RSKSKFQEVP-ETGVTFVDVA-GADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 273

Query: 820  PGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDI 975
            PGTGK+ +  A+A      +F       +EL      + +R LF +   K+  I+ I++I
Sbjct: 274  PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEI 333

Query: 976  DCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGG 1155
            D                                       + T++ LL  +DG     G 
Sbjct: 334  DA----------------------VGRQRGAGLGGGNDEREQTINQLLTEMDGFAGNSG- 370

Query: 1156 ERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
              I++  TN  + LD AL+R GR D+ +
Sbjct: 371  -VIVLAATNRPDVLDAALLRPGRFDRQV 397

---

>O04019:PRS6A_ARATH 26S protease regulatory subunit 6A homolog - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 419

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 54/186 (29%), Positives = 80/186 (43%), Gaps = 9/186 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAM-----AYFLDYDVYD 885
            + +V+ ++     K+ + K+G    +G LLYGPPGTGK+ M  A      A FL      
Sbjct: 176  QELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 235

Query: 886  LELTAVKNNTEL-RKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXX 1056
            L    + +  +L R  F+    KS  II I++ID                          
Sbjct: 236  LVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDA----------------------IGT 273

Query: 1057 XXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERI-IIFTTNHKEKLDPALIRRGRMDK 1233
                         + T+  LLN +DG  S    +RI +I  TN  + LDPAL+R GR+D+
Sbjct: 274  KRFDSEVSGDREVQRTMLELLNQLDGFSS---DDRIKVIAATNRADILDPALMRSGRLDR 330

Query: 1234 HIEMSY 1251
             IE  +
Sbjct: 331  KIEFPH 336

---

>P47695:FTSH_MYCGE Cell division protease ftsH homolog - Mycoplasma genitalium|
          Length = 702

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
 Frame = +1

Query: 688  FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA--- 858
            F  +A   +EK  ++ E++ + ++   YA++G    RG +LYGPPGTGK+ +  A+A   
Sbjct: 230  FTNIAGLQEEKHELL-EIVDYLKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVAGEA 288

Query: 859  ---YFLDYDVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXX 1023
               +F        ++        +R LF   +     II I++ID               
Sbjct: 289  GVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEID--------------- 333

Query: 1024 XXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDP 1203
                                    + TL+ LL  +DG  S  G   +++  TN  + LD 
Sbjct: 334  -------SVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTG--VVVMAATNRLDVLDD 384

Query: 1204 ALIRRGRMDKHIEMS 1248
            AL+R GR D+HI+++
Sbjct: 385  ALLRPGRFDRHIQIN 399

---

>Q9CD58:FTSH_MYCLE Cell division protease ftsH homolog - Mycobacterium leprae|
          Length = 787

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 8/187 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE    + E+  F ++   Y  +G    +G LLYGPPGTGK+ +  A+A      +F   
Sbjct: 169  DEAVEELYEIKDFLQNPCRYQTLGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTIS 228

Query: 874  DVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R LF +    S  II +++ID                       
Sbjct: 229  GSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDA---------------------- 266

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG     G   I+I  TN  + LDPAL+R GR 
Sbjct: 267  VGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAG--VILIAATNRPDILDPALLRPGRF 324

Query: 1228 DKHIEMS 1248
            D+ I +S
Sbjct: 325  DRQIPVS 331

---

>P49825:FTSH_ODOSI Cell division protease ftsH homolog - Odontella sinensis (Marine|
            centric diatom)
          Length = 644

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 8/187 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYD-- 885
            DE +   +E+++F +  D Y  VG    +G LL GPPGTGK+ +  A+A   D   +   
Sbjct: 192  DEAKTEFEEIVSFLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVA 251

Query: 886  ----LELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+        +R LF + +  +  I+ I++ID                       
Sbjct: 252  GSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDA---------------------- 289

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG     G   I++  TN  + LD AL+R GR 
Sbjct: 290  VGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKG--VIVVGATNRADILDAALLRPGRF 347

Query: 1228 DKHIEMS 1248
            D+ + ++
Sbjct: 348  DRQVTVN 354

---

>O19922:FTSH_CYACA Cell division protease ftsH homolog - Cyanidium caldarium|
          Length = 614

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 8/216 (3%)
 Frame = +1

Query: 661  HVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKST 840
            H+  +    F+ +A   + KE +  E++AF +    +  VG    +G LL GPPGTGK+ 
Sbjct: 161  HMEAKTGIVFEDVAGIEEAKEEL-QEIVAFLKDSRKFTNVGATIPKGVLLVGPPGTGKTL 219

Query: 841  MIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLT 996
            +  A+A      +F       +E+      + +R LF +   K+  I+ I++ID      
Sbjct: 220  LAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDA----- 274

Query: 997  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFT 1176
                                             + TL+ LL  +DG     G   I++  
Sbjct: 275  -----------------VGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTG--VIVVAA 315

Query: 1177 TNHKEKLDPALIRRGRMDKHIEMSYCRFEGFKVLAK 1284
            TN  + LD AL+R GR D+ I +S     G   + K
Sbjct: 316  TNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILK 351

---

>Q39444:FTSH_CAPAN Cell division protease ftsH homolog, chloroplast precursor - Capsicum|
            annuum (Bell pepper)
          Length = 662

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 8/208 (3%)
 Frame = +1

Query: 640  RSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGP 819
            RS S +  VP E   TF  +A   D+ +  + E++ F ++ D Y  +G    +G LL GP
Sbjct: 214  RSKSKFQEVP-ETGVTFADVA-GADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 271

Query: 820  PGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDI 975
            PGTGK+ +  A+A      +F       +EL      + +R LF     K+  I+ I++I
Sbjct: 272  PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEI 331

Query: 976  DCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGG 1155
            D                                       + T++ LL  +DG     G 
Sbjct: 332  DA----------------------VGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSG- 368

Query: 1156 ERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
              I++  TN  + LD AL+R G+ D+ +
Sbjct: 369  -VIVLAATNRPDVLDSALLRPGKFDRQV 395

---

>P94304:FTSH_BACPF Cell division protease ftsH homolog - Bacillus pseudofirmus|
          Length = 679

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
 Frame = +1

Query: 682  ATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA- 858
            A F  +A   +EK+ +V E++ F +    ++ +G    +G LL GPPGTGK+ +  A+A 
Sbjct: 163  AKFKDVAGADEEKQELV-EVVEFLKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAG 221

Query: 859  -----YFLDYDVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXX 1017
                 +F       +E+      + +R LF   +     II I++ID             
Sbjct: 222  EAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDA------------ 269

Query: 1018 XXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKL 1197
                                      + TL+ LL  +DG +SA  G  III  TN  + L
Sbjct: 270  ----------VGRQRGAGLGGGHDEREQTLNQLLVEMDG-FSANEG-IIIIAATNRADIL 317

Query: 1198 DPALIRRGRMDKHIEMS----YCRFEGFKVLAKN 1287
            DPAL+R GR D+ I+++      R E  KV A+N
Sbjct: 318  DPALLRPGRFDRQIQVNRPDVNGREEVLKVHARN 351

---

>Q39102:FTSH1_ARATH Cell division protease ftsH homolog 1, chloroplast precursor -|
            Arabidopsis thaliana (Mouse-ear cress)
          Length = 716

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
 Frame = +1

Query: 640  RSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGP 819
            RS S +  VP E   +F  +A   D+ +  + E++ F ++ D Y  +G    +G LL GP
Sbjct: 246  RSKSKFQEVP-ETGVSFADVA-GADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 303

Query: 820  PGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDI 975
            PGTGK+ +  A+A      +F       +EL      + +R LF +   K+  I+ I++I
Sbjct: 304  PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 363

Query: 976  DCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGG 1155
            D                                       + T++ LL  +DG     G 
Sbjct: 364  DA----------------------VGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSG- 400

Query: 1156 ERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
              I++  TN  + LD AL+R GR D+ +
Sbjct: 401  -VIVLAATNRPDVLDSALLRPGRFDRQV 427

---

>Q1XDF9:FSTH_PORYE Cell division protease ftsH homolog - Porphyra yezoensis|
          Length = 628

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 23/251 (9%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            +E +    E++ F +  + +  VG    +G LL GPPGTGK+ +  A+A      +F   
Sbjct: 179  EEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEASVPFFSIS 238

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R LF   +     I+ I++ID                       
Sbjct: 239  GSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDA---------------------- 276

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG     G   I+I  TN  + LD AL+R GR 
Sbjct: 277  VGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTG--VIVIAATNRADILDSALLRPGRF 334

Query: 1228 DKHIEMSYCRFEG----FKVLAKN-------YLDVIEHELFG----EIQQLLDETDMSPA 1362
            D+ + +    F+G     +V AKN        L+ I     G    ++  LL+E  +  A
Sbjct: 335  DRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGADLANLLNEAAILTA 394

Query: 1363 DVAENLMPMSK 1395
               +N M MS+
Sbjct: 395  RRRKNAMTMSE 405

---

>P39925:AFG3_YEAST Mitochondrial respiratory chain complexes assembly protein AFG3 -|
            Saccharomyces cerevisiae (Baker's yeast)
          Length = 761

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 8/186 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-----YFLDYD 876
            DE +  + E + F ++   Y K+G    RG +L GPPGTGK+ +  A A      FL   
Sbjct: 294  DEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVS 353

Query: 877  VYD-LELTAVKNNTELRKLFIE--TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
              + +E+      + +R LF +  +   SII I++ID                       
Sbjct: 354  GSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDA--------------------IG 393

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG  ++   + +++  TN  + LD AL+R GR 
Sbjct: 394  KERGKGGALGGANDEREATLNQLLVEMDGFTTS--DQVVVLAGTNRPDVLDNALMRPGRF 451

Query: 1228 DKHIEM 1245
            D+HI++
Sbjct: 452  DRHIQI 457

---

>Q58556:Y1156_METJA Cell division cycle protein 48 homolog MJ1156 - Methanococcus|
            jannaschii
          Length = 903

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 8/204 (3%)
 Frame = +1

Query: 685  TFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYF 864
            T++ +    +E + V + +       + + K+G    +G LL GPPGTGK+ +  A+A  
Sbjct: 177  TYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANE 236

Query: 865  LDYDVYDLE----LTAVKNNTE--LRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXX 1020
               + Y +     ++     TE  LRK+F   E    SII I++ID              
Sbjct: 237  AGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDA------------- 283

Query: 1021 XXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLD 1200
                                     +  ++ LL  +DGL     G+ ++I  TN    LD
Sbjct: 284  ------------IAPKRDEATGEVERRLVAQLLTLMDGLKGR--GQVVVIGATNRPNALD 329

Query: 1201 PALIRRGRMDKHIEMSYCRFEGFK 1272
            PAL R GR D+ I +     EG K
Sbjct: 330  PALRRPGRFDREIVIGVPDREGRK 353



 Score = 43.1 bits (100), Expect = 0.004
 Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 8/170 (4%)
 Frame = +1

Query: 754  ESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNT 915
            ++K+ + K+G    +G LL+GPPGTGK+ +  A+A     +   ++   +      ++  
Sbjct: 473  KAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEK 532

Query: 916  ELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1089
             +R++F     +   II  ++ID                                     
Sbjct: 533  AIREIFRKARQSAPCIIFFDEIDA------------------------IAPKRGRDLSSA 568

Query: 1090 ATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
             T   ++ LL  +DG+      + ++I  TN  + +DPAL+R GR+D+ I
Sbjct: 569  VTDKVVNQLLTELDGMEEP--KDVVVIAATNRPDIIDPALLRPGRLDRVI 616

---

>Q8TX03:PSMR_METKA Proteasome-activating nucleotidase - Methanopyrus kandleri|
          Length = 436

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 12/183 (6%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + + KVG    +G LLYGPPGTGK+ +  A+A   D     L    +      +    +R
Sbjct: 203  ELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVR 262

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF        SII I++ID                                       +
Sbjct: 263  ELFELAREKAPSIIFIDEIDA----------------------IGARRMRDATSGDREVQ 300

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM----SYCRFEG 1266
             TL+ LL  +DG       +  +I  TN K+ LDPAL+R GR D+HI++       R+E 
Sbjct: 301  RTLTQLLAEMDGFDPL--DDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEI 358

Query: 1267 FKV 1275
            FK+
Sbjct: 359  FKI 361

---

>Q01939:PRS8_YEAST 26S protease regulatory subunit 8 homolog - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 405

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELR 924
            + +  +G A  +G +LYGPPGTGK+ +  A+A+  D     V   EL      + +  +R
Sbjct: 172  ELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVR 231

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID S+  T                                 +
Sbjct: 232  ELFVMAREHAPSIIFMDEID-SIGST---------------------RVEGSGGGDSEVQ 269

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  ++   +  II  TN  + LDPAL+R GR+D+ IE
Sbjct: 270  RTMLELLNQLDGFETSKNIK--IIMATNRLDILDPALLRPGRIDRKIE 315

---

>O17071:PRS10_CAEEL Probable 26S protease regulatory subunit S10B - Caenorhabditis|
            elegans
          Length = 406

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 8/169 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + + +VG    +G LL+GPPGTGK+ +  A+A  LD +   +  +A+      ++   +R
Sbjct: 174  ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233

Query: 925  KLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            ++F         I+ +++ID                                       +
Sbjct: 234  EMFNYARDHQPCIVFMDEIDA----------------------IGGRRFSEGTSADREIQ 271

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
             TL  LLN +DG  S   G+  +I  TN  + LDPAL+R GR+D+ IE+
Sbjct: 272  RTLMELLNQLDGFDSL--GKVKVIMATNRPDTLDPALLRPGRLDRKIEI 318

---

>P73179:FTSH2_SYNY3 Cell division protease ftsH homolog 2 - Synechocystis sp. (strain PCC|
            6803)
          Length = 665

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 8/197 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  + E++ F +  + +  +G    RG LL GPPGTGK+ +  A+A      +F   
Sbjct: 217  DEAKEELQEVVTFLKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSIS 276

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R LF   +     ++ I++ID                       
Sbjct: 277  GSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDA---------------------- 314

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG     G   I+I  TN  + LD AL+R GR 
Sbjct: 315  VGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSG--IIVIAATNRPDVLDLALLRPGRF 372

Query: 1228 DKHIEMSYCRFEGFKVL 1278
            D+ + + Y   +G +++
Sbjct: 373  DRQVTVDYPDVQGRELI 389

---

>Q07590:SAV_SULAC Protein SAV - Sulfolobus acidocaldarius|
          Length = 780

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 8/169 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAM-----AYFLDYDVYDLELTAV-KNNTELR 924
            + + ++G    +G LLYGPPGTGK+ +  A+     AYF+  +  ++      ++   +R
Sbjct: 236  ELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIR 295

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            ++F   E    SII I++ID                                       K
Sbjct: 296  EIFKEAEENAPSIIFIDEIDA-------------------------IAPKREDVTGEVEK 330

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
              ++ LL  +DG+     G  I+I  TN  + +DPAL R GR D+ IE+
Sbjct: 331  RVVAQLLTLMDGIKGR--GRVIVIGATNRPDAIDPALRRPGRFDREIEI 377



 Score = 43.1 bits (100), Expect = 0.004
 Identities = 56/237 (23%), Positives = 91/237 (38%), Gaps = 12/237 (5%)
 Frame = +1

Query: 613  NASRNSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAW 792
            NA ++  P     V+  VP  +      L     +    V+  + F E    + K G   
Sbjct: 464  NALKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPE---LFTKSGVTP 520

Query: 793  KRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLF--IETTG 948
             +G LL+GPPGTGK+ +  A+A      +        L     ++   +R++F       
Sbjct: 521  PKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAA 580

Query: 949  KSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFI 1128
             ++I  ++ID    +                                 T+  ++ LL  +
Sbjct: 581  PTVIFFDEIDSIAPI------------------------RGLSTDSGVTERIVNQLLAEM 616

Query: 1129 DGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM----SYCRFEGFKVLAKN 1287
            DG+      + +II  TN  + LDPAL+R GR D+ I +       RFE  KV  KN
Sbjct: 617  DGIVPL--NKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKN 671

---

>Q6LWR0:PSMR_METMP Proteasome-activating nucleotidase - Methanococcus maripaludis|
          Length = 407

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
 Frame = +1

Query: 754  ESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTE 918
            ++ + + KVG    +G LLYGPPGTGK+ +  A+AY     F+     +L    +    +
Sbjct: 169  KNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAK 228

Query: 919  L-RKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1089
            L R +F     KS  II I++ID                                     
Sbjct: 229  LVRDVFKLAKEKSPCIIFIDEIDAVAS----------------------KRTESLTGGDR 266

Query: 1090 ATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMS 1248
              + TL  LL  +DG  S   G+  II  TN  + LDPA++R GR D+ IE+S
Sbjct: 267  EVQRTLMQLLAEMDGFDSR--GDVKIIAATNRPDILDPAILRPGRFDRIIEIS 317

---

>P25694:CDC48_YEAST Cell division control protein 48 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 835

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    RG L+YGPPGTGK+ M  A+A      +FL      +   A ++ + LRK 
Sbjct: 240  FKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKA 299

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    +II I++ID                                       +  
Sbjct: 300  FEEAEKNAPAIIFIDEID-------------------------SIAPKRDKTNGEVERRV 334

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM----SYCRFEGFK 1272
            +S LL  +DG+        ++I  TN    +DPAL R GR D+ +++    +  R E  +
Sbjct: 335  VSQLLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLR 392

Query: 1273 VLAKN 1287
            +  KN
Sbjct: 393  IHTKN 397



 Score = 42.7 bits (99), Expect = 0.005
 Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL---ELTAV---KNNTELR 924
            D Y K G +  +G L YGPPGTGK+ +  A+A  +  +   +   EL ++   ++ + +R
Sbjct: 511  DQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIR 570

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F        +++ ++++D                                     A+ 
Sbjct: 571  DIFDKARAAAPTVVFLDELD----------------------SIAKARGGSLGDAGGASD 608

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
              ++ LL  +DG+         +I  TN  +++DPA++R GR+D+ I
Sbjct: 609  RVVNQLLTEMDGM--NAKKNVFVIGATNRPDQIDPAILRPGRLDQLI 653

---

>Q25544:PRS8_NAEFO 26S protease regulatory subunit 8 homolog - Naegleria fowleri|
          Length = 414

 Score = 50.8 bits (120), Expect = 2e-05
 Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + +  +G A  +G ++YGPPGTGK+ +  A+A+  D     +  + +      + +  +R
Sbjct: 180  ELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVR 239

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID S+  T                                 +
Sbjct: 240  ELFVMAREHAPSIIFMDEID-SIGST--------------------RTEGGKGGGDSEVQ 278

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  S    +  II  TN  + LDPAL+R GR+D+ IE
Sbjct: 279  RTMLELLNQLDGFESTQNIK--IIMATNRIDILDPALLRPGRIDRKIE 324

---

>O23894:PRS6A_BRACM 26S protease regulatory subunit 6A homolog - Brassica campestris|
            (Field mustard)
          Length = 424

 Score = 50.8 bits (120), Expect = 2e-05
 Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 9/186 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYD 885
            + +V+ ++     K+ + K+G    +G LLYGPPGTGK+ M  A A      FL      
Sbjct: 181  QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240

Query: 886  LELTAVKNNTEL-RKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXX 1056
            L    + +  +L R  F     K+  II I++ID                          
Sbjct: 241  LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDA----------------------IGT 278

Query: 1057 XXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERI-IIFTTNHKEKLDPALIRRGRMDK 1233
                         + T+  LLN +DG  S    ERI +I  TN  + LDPAL+R GR+D+
Sbjct: 279  KRFDSEVSGDREVQRTMLELLNQLDGFSS---DERIKVIAATNRADILDPALMRSGRLDR 335

Query: 1234 HIEMSY 1251
             IE  +
Sbjct: 336  KIEFPH 341

---

>O16368:PRS4_CAEEL Probable 26S protease regulatory subunit 4 - Caenorhabditis elegans|
          Length = 443

 Score = 50.8 bits (120), Expect = 2e-05
 Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            +YY ++G    +G +LYG PGTGK+ +  A+A      FL     +L    + +  ++ R
Sbjct: 212  EYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVR 271

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   E    SI+ I++ID                                       +
Sbjct: 272  ELFRVAEENAPSIVFIDEIDA----------------------VGTKRYDSNSGGEREIQ 309

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  S   G+  ++  TN  E LDPALIR GR+D+ IE
Sbjct: 310  RTMLELLNQLDGFDSR--GDVKVLMATNRIESLDPALIRPGRIDRKIE 355

---

>O83746:FTSH_TREPA Cell division protease ftsH homolog - Treponema pallidum|
          Length = 609

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 8/184 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  + E++ F +    Y ++G    RG LL GPPGTGK+ +  A+A      +F   
Sbjct: 147  DEAKEELMEVVDFLKFPKKYTEIGGKIPRGVLLVGPPGTGKTLLARAVAGEASVPFFRIS 206

Query: 874  DVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R LF +   K+  II I+++D                       
Sbjct: 207  GSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDA---------------------- 244

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG  +  G   I++  TN  + LDPAL+R GR 
Sbjct: 245  -IGKSRLNAIHSNDEREQTLNQLLVEMDGFDNTTG--LILLAATNRPDVLDPALLRPGRF 301

Query: 1228 DKHI 1239
            D+ +
Sbjct: 302  DRQV 305

---

>P59652:FTSH_STRR6 Cell division protease ftsH homolog - Streptococcus pneumoniae|
            (strain ATCC BAA-255 / R6)
          Length = 652

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 13/213 (6%)
 Frame = +1

Query: 688  FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA--- 858
            F  +A   +EK+ +V E++ F +    + K+G     G LL GPPGTGK+ +  A+A   
Sbjct: 186  FSDVAGAEEEKQELV-EVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEA 244

Query: 859  ---YFLDYDVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXX 1023
               +F       +E+      + +R LF   +    +II I++ID               
Sbjct: 245  GVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDA-------------- 290

Query: 1024 XXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLD 1200
                                    + TL+ LL  +DG     G E II+   TN  + LD
Sbjct: 291  --------VGRQRGVGLGGGNDEREQTLNQLLIEMDGFE---GNEGIIVIAATNRSDVLD 339

Query: 1201 PALIRRGRMDKHIEMSYCRFEG----FKVLAKN 1287
            PAL+R GR D+ + +     +G     KV AKN
Sbjct: 340  PALLRPGRFDRKVLVGRPDVKGREAILKVHAKN 372

---

>O69076:FTSH_STRPN Cell division protease ftsH homolog - Streptococcus pneumoniae|
          Length = 652

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 13/213 (6%)
 Frame = +1

Query: 688  FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA--- 858
            F  +A   +EK+ +V E++ F +    + K+G     G LL GPPGTGK+ +  A+A   
Sbjct: 186  FSDVAGAEEEKQELV-EVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEA 244

Query: 859  ---YFLDYDVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXX 1023
               +F       +E+      + +R LF   +    +II I++ID               
Sbjct: 245  GVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDA-------------- 290

Query: 1024 XXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLD 1200
                                    + TL+ LL  +DG     G E II+   TN  + LD
Sbjct: 291  --------VGRQRGVGLGGGNDEREQTLNQLLIEMDGFE---GNEGIIVIAATNRSDVLD 339

Query: 1201 PALIRRGRMDKHIEMSYCRFEG----FKVLAKN 1287
            PAL+R GR D+ + +     +G     KV AKN
Sbjct: 340  PALLRPGRFDRKVLVGRPDVKGREAILKVHAKN 372

---

>O88967:YMEL1_MOUSE ATP-dependent metalloprotease YME1L1 - Mus musculus (Mouse)|
          Length = 715

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 9/209 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-------YFLD 870
            +E +  + E++ F ++   +  +G    +G LL GPPGTGK+ +  A+A       Y+  
Sbjct: 287  EEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYAS 346

Query: 871  YDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXX 1044
               +D E+      + +R LF E    +  +I I+++D                      
Sbjct: 347  GSEFD-EMFVGVGASRIRNLFREAKANAPCVIFIDELD---------------------- 383

Query: 1045 XXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGR 1224
                            ++ T++ LL  +DG     G   III  TN  E LD ALIR GR
Sbjct: 384  --SVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEG--VIIIGATNFPEALDNALIRPGR 439

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYLDVIEHE 1311
             D  + +     +G   + K YL+ I+ +
Sbjct: 440  FDMQVTVPRPDVKGRTEILKWYLNKIKFD 468

---

>P23787:TERA_XENLA Transitional endoplasmic reticulum ATPase - Xenopus laevis (African|
            clawed frog)
          Length = 805

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    RG LLYGPPGTGK+ +  A+A      +FL      +   A ++ + LRK 
Sbjct: 230  FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 289

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    +II I+++D                                       +  
Sbjct: 290  FEEAEKNAPAIIFIDELDA-------------------------IAPKREKTHGEVERRI 324

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM----SYCRFEGFK 1272
            +S LL  +DGL        I++  TN    +DPAL R GR D+ +++    S  R E  +
Sbjct: 325  VSQLLTLMDGLKQR--AHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ 382

Query: 1273 VLAKN 1287
            +  KN
Sbjct: 383  IHTKN 387



 Score = 36.6 bits (83), Expect = 0.37
 Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 8/212 (3%)
 Frame = +1

Query: 628  SNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYL 807
            SNP         VP     T++ +    D K  + + +    E  D + K G    +G L
Sbjct: 459  SNPSALRETVVEVP---QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 515

Query: 808  LYGPPGTGKSTMIAAMAYFLDYDVYDL---ELTAV---KNNTELRKLF--IETTGKSIIV 963
             YGPPG GK+ +  A+A     +   +   EL  +   ++   +R++F         ++ 
Sbjct: 516  FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575

Query: 964  IEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWS 1143
             +++D                                     A    ++ +L  +DG+  
Sbjct: 576  FDELD----------------------SIAKARGGNIGDGGGAADRVINQILTEMDGM-- 611

Query: 1144 ACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            +      II  TN  + +DPA++R GR+D+ I
Sbjct: 612  SIKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643

---

>P34124:PRS8_DICDI 26S protease regulatory subunit 8 - Dictyostelium discoideum (Slime|
            mold)
          Length = 389

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + +  +G A  +G LLYGPPGTGK+ +  A+A+  D     +  + +      + +  +R
Sbjct: 155  ELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVR 214

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LFI       SII +++ID                                       +
Sbjct: 215  ELFIMAREHAPSIIFMDEID---------------------SIGSSRGESGSGGGDSEVQ 253

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  S    +  ++  TN  + LDPAL+R GR+D+ IE
Sbjct: 254  RTMLELLNQLDGFESTKNIK--VLMCTNRIDILDPALLRPGRIDRKIE 299

---

>Q9TJ83:FTSH_CYAME Cell division protease ftsH homolog - Cyanidioschyzon merolae (Red|
            alga)
          Length = 603

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 8/195 (4%)
 Frame = +1

Query: 688  FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA--- 858
            FD +A   + KE +  E++AF ++   +  VG +  +G LL GPPGTGK+ +  A+A   
Sbjct: 153  FDDVAGIEEAKEELA-EVVAFLKNPSKFLAVGASIPKGVLLVGPPGTGKTLLAKAIAGEA 211

Query: 859  ---YFLDYDVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXX 1023
               +F       +E+      + +R LF   +     ++ I++ID               
Sbjct: 212  SVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDA-------------- 257

Query: 1024 XXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDP 1203
                                    + TL+ LL  +DG     G   I+I  TN  + LD 
Sbjct: 258  --------VGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTG--VIVIAATNRVDVLDA 307

Query: 1204 ALIRRGRMDKHIEMS 1248
            AL+R GR D+ I +S
Sbjct: 308  ALLRPGRFDRQIMVS 322

---

>Q9P3A7:CDC48_SCHPO Cell division cycle protein 48 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 815

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 8/167 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    RG L+YGPPGTGK+ M  A+A      +FL      +   A ++ + LRK 
Sbjct: 250  FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA 309

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    +II I++ID                                       +  
Sbjct: 310  FEEAEKNSPAIIFIDEID-------------------------SIAPKREKTNGEVERRV 344

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
            +S LL  +DG+        +++  TN    +DPAL R GR D+ +++
Sbjct: 345  VSQLLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRFDREVDV 389

---

>Q96TA2:YMEL1_HUMAN ATP-dependent metalloprotease YME1L1 - Homo sapiens (Human)|
          Length = 773

 Score = 49.7 bits (117), Expect = 4e-05
 Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 9/209 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-------YFLD 870
            +E +  + E++ F ++   +  +G    +G LL GPPGTGK+ +  A+A       Y+  
Sbjct: 345  EEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYAS 404

Query: 871  YDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXX 1044
               +D E+      + +R LF E    +  +I I+++D                      
Sbjct: 405  GSEFD-EMFVGVGASRIRNLFREAKANAPCVIFIDELD---------------------- 441

Query: 1045 XXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGR 1224
                            ++ T++ LL  +DG     G   III  TN  E LD ALIR GR
Sbjct: 442  --SVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEG--VIIIGATNFPEALDNALIRPGR 497

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYLDVIEHE 1311
             D  + +     +G   + K YL+ I+ +
Sbjct: 498  FDMQVTVPRPDVKGRTEILKWYLNKIKFD 526

---

>Q975U2:PSMR_SULTO Proteasome-activating nucleotidase - Sulfolobus tokodaii|
          Length = 392

 Score = 49.7 bits (117), Expect = 4e-05
 Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 8/188 (4%)
 Frame = +1

Query: 754  ESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTE 918
            ++ + + ++G    +G LLYGPPGTGK+ +  A+A      F+     +     V     
Sbjct: 155  KNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGAR 214

Query: 919  LRKLFIETTGK---SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1089
            + +   E   +   SI+ I++ID                                     
Sbjct: 215  IVREVFELARRKAPSIVFIDEIDA----------------------IGAKRVDMGTSGER 252

Query: 1090 ATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEGF 1269
              + TL  LL  IDG       +  II  TN  + LDPAL+R GR D+ IE+    FEG 
Sbjct: 253  EIQRTLMQLLAEIDGFKPLDNVK--IIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGR 310

Query: 1270 KVLAKNYL 1293
            K + + YL
Sbjct: 311  KEIFRIYL 318

---

>P51327:FTSH_PORPU Cell division protease ftsH homolog - Porphyra purpurea|
          Length = 628

 Score = 49.7 bits (117), Expect = 4e-05
 Identities = 61/251 (24%), Positives = 99/251 (39%), Gaps = 23/251 (9%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            +E +    E++ F +  + +  VG    +G LL GPPGTGK+ +  A+A      +F   
Sbjct: 179  EEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSIS 238

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R LF   +     I+ I++ID                       
Sbjct: 239  GSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDA---------------------- 276

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG     G   I+I  TN  + LD AL+R GR 
Sbjct: 277  VGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTG--VIVIAATNRADILDSALLRPGRF 334

Query: 1228 DKHIEMSYCRFEG----FKVLAKN-------YLDVIEHELFG----EIQQLLDETDMSPA 1362
            D+ + +    F G     +V AKN        L+ I     G    ++  LL+E  +  A
Sbjct: 335  DRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTA 394

Query: 1363 DVAENLMPMSK 1395
               ++ M MS+
Sbjct: 395  RRRKSAMTMSE 405

---

>O78516:FTSH_GUITH Cell division protease ftsH homolog - Guillardia theta (Cryptomonas|
            phi)
          Length = 631

 Score = 49.7 bits (117), Expect = 4e-05
 Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +   +E+++F +  + +  VG    +G LL GPPGTGK+ +  A+A      +F   
Sbjct: 179  DEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSIS 238

Query: 874  DVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R LF +    S  I+ I++ID                       
Sbjct: 239  GSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDA---------------------- 276

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG     G   III  TN  + LD AL+R GR 
Sbjct: 277  VGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTG--IIIIAATNRVDVLDAALLRPGRF 334

Query: 1228 DKHI 1239
            D+ +
Sbjct: 335  DRQV 338

---

>P54774:CDC48_SOYBN Cell division cycle protein 48 homolog - Glycine max (Soybean)|
          Length = 807

 Score = 49.7 bits (117), Expect = 4e-05
 Identities = 50/185 (27%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    +G LLYGPPG+GK+ +  A+A      +F       +   A ++ + LRK 
Sbjct: 234  FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 293

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    SII I++ID                                       +  
Sbjct: 294  FEEAEKNAPSIIFIDEID-------------------------SIAPKREKTHGEVERRI 328

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM----SYCRFEGFK 1272
            +S LL  +DGL S      I+I  TN    +DPAL R GR D+ I++       R E  +
Sbjct: 329  VSQLLTLMDGLKSR--AHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR 386

Query: 1273 VLAKN 1287
            +  KN
Sbjct: 387  IHTKN 391



 Score = 36.2 bits (82), Expect = 0.49
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 8/170 (4%)
 Frame = +1

Query: 754  ESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL---ELTAV---KNNT 915
            E  + + K G +  +G L YGPPG GK+ +  A+A     +   +   EL  +   ++  
Sbjct: 502  EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 561

Query: 916  ELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1089
             +R++F     +   ++  +++D                                     
Sbjct: 562  NVREIFDKARQSAPCVLFFDELD----------------------SIATQRGSSVGDAGG 599

Query: 1090 ATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            A    L+ LL  +DG+  +      II  TN  + +DPAL+R GR+D+ I
Sbjct: 600  AADRVLNQLLTEMDGM--SAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 647

---

>P32794:AFG2_YEAST Protein AFG2 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 780

 Score = 49.7 bits (117), Expect = 4e-05
 Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 8/170 (4%)
 Frame = +1

Query: 754  ESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNN------T 915
            E+ + +A++G +  +G LLYGPPG  K+    A+A     +   ++   + N        
Sbjct: 537  EASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESER 596

Query: 916  ELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1089
             +R++F    +   SII  ++ID                                     
Sbjct: 597  AIREIFRKARSAAPSIIFFDEIDA-------------------------LSPDRDGSSTS 631

Query: 1090 ATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            A    L+ LLN IDG+    G   +I+  TN  +++D AL+R GR+D+HI
Sbjct: 632  AANHVLTSLLNEIDGVEELKGV--VIVAATNRPDEIDAALLRPGRLDRHI 679



 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 9/183 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELRKL 930
            ++  G +  RG LL+GPPGTGK+ ++  +A   +  V  +   ++      +    LR +
Sbjct: 271  FSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDI 330

Query: 931  FIETT--GKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F E      SII I++ID                                          
Sbjct: 331  FNEARKYQPSIIFIDEID------------------------SIAPNRANDDSGEVESRV 366

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG-FKVLA 1281
            ++ LL  +DG+ +A  G+ ++I  TN    +DPAL R GR D+ +E+     +  F +L 
Sbjct: 367  VATLLTLMDGMGAA--GKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILT 424

Query: 1282 KNY 1290
            K +
Sbjct: 425  KQF 427

---

>P54813:YME1_CAEEL Protein YME1 homolog - Caenorhabditis elegans|
          Length = 676

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 8/207 (3%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  V+E++ + +  + Y+++G    +G LL GPPGTGK+ +  A+A      +F   
Sbjct: 207  DEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTA 266

Query: 874  DVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                 E+   +    +R LF +   ++  II I++ID                       
Sbjct: 267  GSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEID----------------------- 303

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                              T++ LL+ +DG     G   I+I  TN  + LD AL+R GR 
Sbjct: 304  -SVGSKRVSNSIHPYANQTINQLLSEMDGFTRNEG--IIVIAATNRVDDLDKALLRPGRF 360

Query: 1228 DKHIEMSYCRFEGFKVLAKNYLDVIEH 1308
            D  + +      G   +   YL  I H
Sbjct: 361  DVRVTVPKPDLAGRVDIFNFYLSKIVH 387

---

>O05209:VAT_THEAC VCP-like ATPase - Thermoplasma acidophilum|
          Length = 745

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 8/169 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + + ++G    +G +LYGPPGTGK+ +  A+A     +   +    +      ++  +LR
Sbjct: 214  ELFERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLR 273

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            ++F   E T  SII I++ID                                       +
Sbjct: 274  EIFSKAEETAPSIIFIDEID-------------------------SIAPKREEVQGEVER 308

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
              ++ LL  +DG+     G  I+I  TN  + +DPAL R GR D+ IE+
Sbjct: 309  RVVAQLLTLMDGMKER--GHVIVIGATNRIDAIDPALRRPGRFDREIEI 355



 Score = 48.9 bits (115), Expect = 7e-05
 Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 8/217 (3%)
 Frame = +1

Query: 613  NASRNSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAW 792
            NA ++  P     V   VP  H   +D +    D K  + + +       D + ++G   
Sbjct: 444  NALKSIEPSSLREVMVEVPNVH---WDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRP 500

Query: 793  KRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELRKLF--IETTG 948
             +G+LLYGPPG GK+ +  A+A   + +   ++   V      ++   +R++F   +   
Sbjct: 501  SKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVA 560

Query: 949  KSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFI 1128
             +I+ +++ID                                      T+  ++ LL  +
Sbjct: 561  PAIVFLDEID------------------------SIAPRRGTTSDSGVTERIVNQLLTSL 596

Query: 1129 DGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            DG+    G   ++I  TN  + +DPAL+R GR DK I
Sbjct: 597  DGIEVMNG--VVVIGATNRPDIMDPALLRAGRFDKLI 631

---

>P46462:TERA_RAT Transitional endoplasmic reticulum ATPase - Rattus norvegicus (Rat)|
          Length = 806

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 8/167 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    RG LLYGPPGTGK+ +  A+A      +FL      +   A ++ + LRK 
Sbjct: 230  FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 289

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    +II I+++D                                       +  
Sbjct: 290  FEEAEKNAPAIIFIDELDA-------------------------IAPKREKTHGEVERRI 324

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
            +S LL  +DGL        I++  TN    +DPAL R GR D+ +++
Sbjct: 325  VSQLLTLMDGLKQR--AHVIVMAATNRPNSIDPALRRFGRFDREVDI 369



 Score = 37.0 bits (84), Expect = 0.28
 Identities = 45/216 (20%), Positives = 81/216 (37%), Gaps = 8/216 (3%)
 Frame = +1

Query: 616  ASRNSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWK 795
            A   SNP         VP     T++ +    D K  + + +    E  D + K G    
Sbjct: 455  ALSQSNPSALRETVVEVP---QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPS 511

Query: 796  RGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL---ELTAV---KNNTELRKLF--IETTGK 951
            +G L YGPPG GK+ +  A+A     +   +   EL  +   ++   +R++F        
Sbjct: 512  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP 571

Query: 952  SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFID 1131
             ++  +++D                                     A    ++ +L  +D
Sbjct: 572  CVLFFDELD----------------------SIAKARGGNIGDGGGAADRVINQILTEMD 609

Query: 1132 GLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            G+  +      II  TN  + +DPA++R GR+D+ I
Sbjct: 610  GM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643

---

>P03974:TERA_PIG Transitional endoplasmic reticulum ATPase - Sus scrofa (Pig)|
          Length = 806

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 8/167 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    RG LLYGPPGTGK+ +  A+A      +FL      +   A ++ + LRK 
Sbjct: 230  FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 289

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    +II I+++D                                       +  
Sbjct: 290  FEEAEKNAPAIIFIDELDA-------------------------IAPKREKTHGEVERRI 324

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
            +S LL  +DGL        I++  TN    +DPAL R GR D+ +++
Sbjct: 325  VSQLLTLMDGLKQR--AHVIVMAATNRPNSIDPALRRFGRFDREVDI 369



 Score = 38.5 bits (88), Expect = 0.098
 Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 8/216 (3%)
 Frame = +1

Query: 616  ASRNSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWK 795
            A   SNP         VP     T++ +    D K  + D +    E  D + K G    
Sbjct: 455  ALSQSNPSALRETVVEVP---QVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPS 511

Query: 796  RGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL---ELTAV---KNNTELRKLF--IETTGK 951
            +G L YGPPG GK+ +  A+A     +   +   EL  +   ++   +R++F        
Sbjct: 512  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP 571

Query: 952  SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFID 1131
             ++  +++D                                     A    ++ +L  +D
Sbjct: 572  CVLFFDELD----------------------SIAKARGGNIGDGGGAADRVINQILTEMD 609

Query: 1132 GLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            G+  +      II  TN  + +DPA++R GR+D+ I
Sbjct: 610  GM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643

---

>Q01853:TERA_MOUSE Transitional endoplasmic reticulum ATPase - Mus musculus (Mouse)|
          Length = 806

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 8/167 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    RG LLYGPPGTGK+ +  A+A      +FL      +   A ++ + LRK 
Sbjct: 230  FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 289

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    +II I+++D                                       +  
Sbjct: 290  FEEAEKNAPAIIFIDELDA-------------------------IAPKREKTHGEVERRI 324

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
            +S LL  +DGL        I++  TN    +DPAL R GR D+ +++
Sbjct: 325  VSQLLTLMDGLKQR--AHVIVMAATNRPNSIDPALRRFGRFDREVDI 369



 Score = 37.0 bits (84), Expect = 0.28
 Identities = 45/216 (20%), Positives = 81/216 (37%), Gaps = 8/216 (3%)
 Frame = +1

Query: 616  ASRNSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWK 795
            A   SNP         VP     T++ +    D K  + + +    E  D + K G    
Sbjct: 455  ALSQSNPSALRETVVEVP---QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPS 511

Query: 796  RGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL---ELTAV---KNNTELRKLF--IETTGK 951
            +G L YGPPG GK+ +  A+A     +   +   EL  +   ++   +R++F        
Sbjct: 512  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP 571

Query: 952  SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFID 1131
             ++  +++D                                     A    ++ +L  +D
Sbjct: 572  CVLFFDELD----------------------SIAKARGGNIGDGGGAADRVINQILTEMD 609

Query: 1132 GLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            G+  +      II  TN  + +DPA++R GR+D+ I
Sbjct: 610  GM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643

---

>P55072:TERA_HUMAN Transitional endoplasmic reticulum ATPase - Homo sapiens (Human)|
          Length = 806

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 8/167 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    RG LLYGPPGTGK+ +  A+A      +FL      +   A ++ + LRK 
Sbjct: 230  FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 289

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    +II I+++D                                       +  
Sbjct: 290  FEEAEKNAPAIIFIDELDA-------------------------IAPKREKTHGEVERRI 324

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
            +S LL  +DGL        I++  TN    +DPAL R GR D+ +++
Sbjct: 325  VSQLLTLMDGLKQR--AHVIVMAATNRPNSIDPALRRFGRFDREVDI 369



 Score = 37.0 bits (84), Expect = 0.28
 Identities = 45/216 (20%), Positives = 81/216 (37%), Gaps = 8/216 (3%)
 Frame = +1

Query: 616  ASRNSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWK 795
            A   SNP         VP     T++ +    D K  + + +    E  D + K G    
Sbjct: 455  ALSQSNPSALRETVVEVP---QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPS 511

Query: 796  RGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL---ELTAV---KNNTELRKLF--IETTGK 951
            +G L YGPPG GK+ +  A+A     +   +   EL  +   ++   +R++F        
Sbjct: 512  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP 571

Query: 952  SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFID 1131
             ++  +++D                                     A    ++ +L  +D
Sbjct: 572  CVLFFDELD----------------------SIAKARGGNIGDGGGAADRVINQILTEMD 609

Query: 1132 GLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            G+  +      II  TN  + +DPA++R GR+D+ I
Sbjct: 610  GM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643

---

>Q3ZBT1:TERA_BOVIN Transitional endoplasmic reticulum ATPase - Bos taurus (Bovine)|
          Length = 806

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 8/167 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    RG LLYGPPGTGK+ +  A+A      +FL      +   A ++ + LRK 
Sbjct: 230  FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 289

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    +II I+++D                                       +  
Sbjct: 290  FEEAEKNAPAIIFIDELDA-------------------------IAPKREKTHGEVERRI 324

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
            +S LL  +DGL        I++  TN    +DPAL R GR D+ +++
Sbjct: 325  VSQLLTLMDGLKQR--AHVIVMAATNRPNSIDPALRRFGRFDREVDI 369



 Score = 37.0 bits (84), Expect = 0.28
 Identities = 45/216 (20%), Positives = 81/216 (37%), Gaps = 8/216 (3%)
 Frame = +1

Query: 616  ASRNSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWK 795
            A   SNP         VP     T++ +    D K  + + +    E  D + K G    
Sbjct: 455  ALSQSNPSALRETVVEVP---QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPS 511

Query: 796  RGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL---ELTAV---KNNTELRKLF--IETTGK 951
            +G L YGPPG GK+ +  A+A     +   +   EL  +   ++   +R++F        
Sbjct: 512  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP 571

Query: 952  SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFID 1131
             ++  +++D                                     A    ++ +L  +D
Sbjct: 572  CVLFFDELD----------------------SIAKARGGNIGDGGGAADRVINQILTEMD 609

Query: 1132 GLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            G+  +      II  TN  + +DPA++R GR+D+ I
Sbjct: 610  GM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643

---

>P54776:PRS6A_SOLLC 26S protease regulatory subunit 6A homolog - Solanum lycopersicum|
            (Tomato) (Lycopersicon esculentum)
          Length = 423

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 53/186 (28%), Positives = 79/186 (42%), Gaps = 9/186 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYD 885
            + +V+ ++     ++ + K+G    +G LLYGPPGTGK+ M  A A      FL      
Sbjct: 180  QELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 239

Query: 886  LELTAVKNNTEL-RKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXX 1056
            L    + +  +L R  F     KS  II I++ID                          
Sbjct: 240  LVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDA----------------------IGT 277

Query: 1057 XXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERI-IIFTTNHKEKLDPALIRRGRMDK 1233
                         + T+  LLN +DG  S    +RI +I  TN  + LDPAL+R GR+D+
Sbjct: 278  KRFDSEVSGDREVQRTMLELLNQLDGFSS---DDRIKVIAATNRADILDPALMRSGRLDR 334

Query: 1234 HIEMSY 1251
             IE  +
Sbjct: 335  KIEFPH 340

---

>Q8K9G8:FTSH_BUCAP Cell division protease ftsH - Buchnera aphidicola subsp. Schizaphis|
            graminum
          Length = 613

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 9/203 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  V EL+ + +    + K+G    +G L+ GPPGTGK+ +  A+A      +F   
Sbjct: 158  DEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTIS 217

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R +F     +   II I++ID                       
Sbjct: 218  GSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDA---------------------- 255

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERII-IFTTNHKEKLDPALIRRGR 1224
                            + TL+ +L  +DG     G E +I I  TN  + LDPAL+R GR
Sbjct: 256  VGRQRGAGLGGGHDEREQTLNQMLVEMDGF---DGNEGVILIAATNRPDVLDPALLRPGR 312

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYL 1293
             D+ + ++     G K + K ++
Sbjct: 313  FDRQVIVALPDVRGRKQILKVHM 335

---

>Q55700:FTSH1_SYNY3 Cell division protease ftsH homolog 1 - Synechocystis sp. (strain PCC|
            6803)
          Length = 627

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 8/195 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  + E++ F +  + +  VG    +G LL GPPGTGK+ +  A+A      +F   
Sbjct: 178  DEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSIS 237

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R LF   +     +I I++ID                       
Sbjct: 238  GSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDA---------------------- 275

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG     G   III  TN  + LD AL+R GR 
Sbjct: 276  VGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTG--IIIIAATNRPDVLDSALMRPGRF 333

Query: 1228 DKHIEMSYCRFEGFK 1272
            D+ + +    + G K
Sbjct: 334  DRQVMVDAPDYSGRK 348

---

>Q925S8:YMEL1_RAT ATP-dependent metalloprotease YME1L1 - Rattus norvegicus (Rat)|
          Length = 715

 Score = 48.9 bits (115), Expect = 7e-05
 Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 9/209 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-------YFLD 870
            +E +  + E++ F ++   +  +G    +G LL GPPGTGK+ +  A+A       Y+  
Sbjct: 287  EEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYAS 346

Query: 871  YDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXX 1044
               +D E+      + +R LF E    +  +I I+++D                      
Sbjct: 347  GSEFD-EMFVGVGASRIRNLFREAKANAPCVIFIDELD---------------------- 383

Query: 1045 XXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGR 1224
                            ++ T+  LL  +DG     G   III  TN  E LD ALIR GR
Sbjct: 384  --SVGGKRIEFPMHPYSRQTIIQLLAEMDGFKPNEG--VIIIGATNFPEALDNALIRPGR 439

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYLDVIEHE 1311
             D  + +     +G   + K YL+ I+ +
Sbjct: 440  FDMQVTVPRPDVKGRTEILKWYLNKIKFD 468

---

>P57462:FTSH_BUCAI Cell division protease ftsH - Buchnera aphidicola subsp.|
            Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic
            bacterium)
          Length = 611

 Score = 48.9 bits (115), Expect = 7e-05
 Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 10/204 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  V EL+ + +    + K+G    +G L+ GPPGTGK+ +  A+A      +F   
Sbjct: 158  DEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTIS 217

Query: 874  DVYDLELTAVKNNTELRKLFIETTGKS---IIVIEDIDCSVDLTXXXXXXXXXXXXXXXX 1044
                +E+      + +R +F E + KS   II I++ID                      
Sbjct: 218  GSDFVEMFVGVGASRVRDMF-EHSRKSAPCIIFIDEIDA--------------------- 255

Query: 1045 XXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERII-IFTTNHKEKLDPALIRRG 1221
                             + TL+ +L  +DG     G E II I  TN  + LDPAL+R G
Sbjct: 256  -VGRQRGAGLGGGHDEREQTLNQMLVEMDGF---DGNEGIILIAATNRPDVLDPALLRPG 311

Query: 1222 RMDKHIEMSYCRFEGFKVLAKNYL 1293
            R D+ + ++     G + + K ++
Sbjct: 312  RFDRQVIVALPDIRGREQILKVHM 335

---

>O26824:PSMR_METTH Proteasome-activating nucleotidase - Methanobacterium|
            thermoautotrophicum
          Length = 410

 Score = 48.5 bits (114), Expect = 9e-05
 Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 8/182 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTELRK 927
            + + K+G    +G LLYGPPGTGK+ +  A+A+     F+     +     +     L +
Sbjct: 175  ELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVR 234

Query: 928  LFIETT---GKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
               E       SII I++ID                                       +
Sbjct: 235  GVFELAKEKSPSIIFIDEIDA----------------------VAAKRLKSSTSGDREVQ 272

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEGFKVL 1278
             TL  LL  +DG  S   G   I+  TN  + LDPAL+R GR D+ IE+     +G + +
Sbjct: 273  RTLMQLLAELDGFESR--GNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREI 330

Query: 1279 AK 1284
             K
Sbjct: 331  LK 332

---

>Q9LZF6:CD48E_ARATH Cell division control protein 48 homolog E - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 810

 Score = 48.5 bits (114), Expect = 9e-05
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    +G LLYGPPG+GK+ +  A+A      +F       +   A ++ + LRK 
Sbjct: 233  FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 292

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    SII I++ID                                       +  
Sbjct: 293  FEEAEKNAPSIIFIDEID-------------------------SIAPKREKTNGEVERRI 327

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM----SYCRFEGFK 1272
            +S LL  +DGL S      I++  TN    +DPAL R GR D+ I++       R E  +
Sbjct: 328  VSQLLTLMDGLKSR--AHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 385

Query: 1273 VLAKN 1287
            +  KN
Sbjct: 386  IHTKN 390



 Score = 34.3 bits (77), Expect = 1.8
 Identities = 22/83 (26%), Positives = 38/83 (45%)
 Frame = +1

Query: 610 NNASRNSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKA 789
           + A  NSNP         VP     +++ +    + K  + + +    E  + + K G +
Sbjct: 456 HTALGNSNPSALRETVVEVP---NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 512

Query: 790 WKRGYLLYGPPGTGKSTMIAAMA 858
             +G L YGPPG GK+ +  A+A
Sbjct: 513 PSKGVLFYGPPGCGKTLLAKAIA 535

---

>Q9SCN8:CD48D_ARATH Cell division control protein 48 homolog D - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 815

 Score = 48.5 bits (114), Expect = 9e-05
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    +G LLYGPPG+GK+ +  A+A      +F       +   A ++ + LRK 
Sbjct: 234  FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 293

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    SII I++ID                                       +  
Sbjct: 294  FEEAEKNAPSIIFIDEID-------------------------SIAPKREKTHGEVERRI 328

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM----SYCRFEGFK 1272
            +S LL  +DGL S      I++  TN    +DPAL R GR D+ I++       R E  +
Sbjct: 329  VSQLLTLMDGLKSR--AHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 386

Query: 1273 VLAKN 1287
            +  KN
Sbjct: 387  IHTKN 391



 Score = 36.2 bits (82), Expect = 0.49
 Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 8/213 (3%)
 Frame = +1

Query: 625  NSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGY 804
            NSNP         VP     +++ +    + K  + + +    E  + + K G +  +G 
Sbjct: 462  NSNPSALRETVVEVP---NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 518

Query: 805  LLYGPPGTGKSTMIAAMAYFLDYDVYDL---ELTAV---KNNTELRKLF--IETTGKSII 960
            L YGPPG GK+ +  A+A     +   +   EL  +   ++   +R++F     +   ++
Sbjct: 519  LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVL 578

Query: 961  VIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLW 1140
              +++D                                     A    L+ LL  +DG+ 
Sbjct: 579  FFDELD----------------------SIATQRGNSVGDAGGAADRVLNQLLTEMDGM- 615

Query: 1141 SACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
                    II  TN  + +DPAL+R GR+D+ I
Sbjct: 616  -NAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 647

---

>Q9ZPR1:CD48B_ARATH Cell division control protein 48 homolog B - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 603

 Score = 48.5 bits (114), Expect = 9e-05
 Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 13/170 (7%)
 Frame = +1

Query: 778  VGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELRKLFIE 939
            +G  W RG LLYGPPGTGK++++ A+    D  +  L   +V      ++   LR+ F E
Sbjct: 51   LGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAE 110

Query: 940  TTG------KSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKV 1101
             +        S+I I++ID                                         
Sbjct: 111  ASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVR-------------------------- 144

Query: 1102 TLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGRMDKHIEMS 1248
              S L   +D    +    R+++  +TN  + +DPAL R GR D  +E+S
Sbjct: 145  IASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVS 194



 Score = 37.0 bits (84), Expect = 0.28
 Identities = 56/222 (25%), Positives = 85/222 (38%), Gaps = 18/222 (8%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMI-----AAMAYFLD------YDVYDLELTAVKNNT 915
            + K+G +  RG LL+GPPG  K+T+      AA A F        + +Y  E  A+  NT
Sbjct: 312  FVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNT 371

Query: 916  ELRKLFIETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAT 1095
              R         SII  ++ D                                       
Sbjct: 372  FQR---ARLASPSIIFFDEAD---------------------VVACKRGDESSSNSSTVG 407

Query: 1096 KVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMS----YCRFE 1263
            +  LS LL  +DGL  A G   +++  TN    +D AL+R GR D  + +       RFE
Sbjct: 408  ERLLSTLLTEMDGLEEAKG--ILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFE 465

Query: 1264 GFKVLAKNYL---DVIEHELFGEIQQLLDETDMSPADVAENL 1380
              +V  +N     DV       +++++ +ETD+      E L
Sbjct: 466  ILQVHTRNMTLGDDV-------DLRKIAEETDLFTGAELEGL 500

---

>P54609:CD48A_ARATH Cell division control protein 48 homolog A - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 809

 Score = 48.5 bits (114), Expect = 9e-05
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    +G LLYGPPG+GK+ +  A+A      +F       +   A ++ + LRK 
Sbjct: 233  FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 292

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    SII I++ID                                       +  
Sbjct: 293  FEEAEKNAPSIIFIDEID-------------------------SIAPKREKTNGEVERRI 327

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM----SYCRFEGFK 1272
            +S LL  +DGL S      I++  TN    +DPAL R GR D+ I++       R E  +
Sbjct: 328  VSQLLTLMDGLKSR--AHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 385

Query: 1273 VLAKN 1287
            +  KN
Sbjct: 386  IHTKN 390



 Score = 33.9 bits (76), Expect = 2.4
 Identities = 22/83 (26%), Positives = 38/83 (45%)
 Frame = +1

Query: 610 NNASRNSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKA 789
           + A  NSNP         VP     +++ +    + K  + + +    E  + + K G +
Sbjct: 456 HTALGNSNPSALRETVVEVP---NVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 512

Query: 790 WKRGYLLYGPPGTGKSTMIAAMA 858
             +G L YGPPG GK+ +  A+A
Sbjct: 513 PSKGVLFYGPPGCGKTLLAKAIA 535

---

>Q980M1:PSMR_SULSO Proteasome-activating nucleotidase - Sulfolobus solfataricus|
          Length = 393

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 62/247 (25%), Positives = 98/247 (39%), Gaps = 14/247 (5%)
 Frame = +1

Query: 754  ESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-----YFLDYDVYDLELTAVKNNTE 918
            ++ + + ++G    +G LLYGPPGTGK+ +  A+A      F+     +     V     
Sbjct: 155  KNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGAR 214

Query: 919  L-RKLFIETTGK--SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1089
            + R+LF     K  SII I++ID                                     
Sbjct: 215  IVRELFEMAKRKAPSIIFIDEIDA----------------------IGAKRIDIGTSGER 252

Query: 1090 ATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEGF 1269
              + TL  LL  +DG       +  II  TN  + LDPAL+R GR D+ IE+    F+G 
Sbjct: 253  EIQRTLMQLLAELDGFDPLDNVK--IIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGR 310

Query: 1270 KVLAKNYL------DVIEHELFGEIQQLLDETDMSPADVAENLMPMSKKKKRDPDVCLTC 1431
              +   YL      D I  EL  ++ +     D+    V    M +   + +   V +  
Sbjct: 311  TEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNK---VTMND 367

Query: 1432 LIEALKQ 1452
            L+EA+ +
Sbjct: 368  LVEAINK 374

---

>Q98PE4:FTSH_MYCPU Cell division protease ftsH homolog - Mycoplasma pulmonis|
          Length = 725

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
 Frame = +1

Query: 730  VDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-------YFLDYDVYDL 888
            V EL+ + ++   YA  G  + +G LL GPPGTGK+ +  A A       +F+    + +
Sbjct: 224  VQELVDYLKNPKKYAAAGARFPKGILLGGPPGTGKTLLAKATAGEANVPFFFISASSF-V 282

Query: 889  ELTAVKNNTELRKLFIET--TGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXX 1062
            EL        +R++F E      +II I+++D                            
Sbjct: 283  ELYVGLGAKRVREMFKEARKLAPAIIFIDELDA----------------------VGRSR 320

Query: 1063 XXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
                       + TL+ +L  +DG+    G   +I+  TN  + LDPAL+R GR D+ I
Sbjct: 321  GSGIGGGNDEREQTLNQILVEMDGINENAG--ILIMGATNRTDVLDPALLRPGRFDRII 377

---

>P37476:FTSH_BACSU Cell division protease ftsH homolog - Bacillus subtilis|
          Length = 637

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 8/192 (4%)
 Frame = +1

Query: 688  FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA--- 858
            F  +A   +EK+ +V E++ F +    +A++G    +G LL GPPGTGK+ +  A A   
Sbjct: 160  FKDVAGADEEKQELV-EVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEA 218

Query: 859  ---YFLDYDVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXX 1023
               +F       +E+      + +R LF   +     +I I++ID               
Sbjct: 219  GVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDA-------------- 264

Query: 1024 XXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDP 1203
                                    + TL+ LL  +DG +SA  G  III  TN  + LDP
Sbjct: 265  --------VGRQRGAGLGGGHDEREQTLNQLLVEMDG-FSANEG-IIIIAATNRADILDP 314

Query: 1204 ALIRRGRMDKHI 1239
            AL+R GR D+ I
Sbjct: 315  ALLRPGRFDRQI 326

---

>Q9HPF0:CDCH_HALSA Protein cdcH - Halobacterium salinarium (Halobacterium halobium)|
          Length = 742

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 8/195 (4%)
 Frame = +1

Query: 685  TFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYF 864
            T++ +    +E + V + +    +    + K+G    +G LL+GPPGTGK+ +  A+A  
Sbjct: 187  TYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANE 246

Query: 865  LDYDVYDLELTAV------KNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXX 1020
                 + +    +      ++  +LR++F   +    SII I+++D              
Sbjct: 247  TSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELD-------------- 292

Query: 1021 XXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLD 1200
                                     +  ++ LL  +DGL     G+ I+I  TN  + +D
Sbjct: 293  -----------SIAPKREDVTGEVERRVVAQLLTMMDGLEGR--GQVIVIAATNRVDAVD 339

Query: 1201 PALIRRGRMDKHIEM 1245
            PAL R GR D+ IE+
Sbjct: 340  PALRRPGRFDREIEI 354



 Score = 45.8 bits (107), Expect = 6e-04
 Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 2/202 (0%)
 Frame = +1

Query: 685  TFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYF 864
            T+D +    + K  V + +       + + ++G     G LLYGPPGTGK+ M  A+A  
Sbjct: 460  TWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVA-- 517

Query: 865  LDYDVYDLELTAVKNNTELRKLFIETTGKSIIV--IEDIDCSVDLTXXXXXXXXXXXXXX 1038
                             E    FI   G  ++   + + + ++  T              
Sbjct: 518  ----------------NETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFF 561

Query: 1039 XXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRR 1218
                              ++  ++ LL  +DGL      E ++I  TN  + +DPALIR 
Sbjct: 562  DELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEM--EEVMVIAATNRPDIIDPALIRS 619

Query: 1219 GRMDKHIEMSYCRFEGFKVLAK 1284
            GR D+ +++     EG + + K
Sbjct: 620  GRFDRLVQVGQPGIEGREQILK 641

---

>Q96372:CDC48_CAPAN Cell division cycle protein 48 homolog - Capsicum annuum (Bell|
            pepper)
          Length = 805

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 8/167 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    +G LLYGPPG+GK+ +  A+A      +F       +   A ++ + LRK 
Sbjct: 234  FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 293

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    SII I++ID                                       +  
Sbjct: 294  FEEAEKNAPSIIFIDEID-------------------------SIAPKREKTHGEVERRI 328

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
            +S LL  +DGL S      I++  TN    +DPAL R GR D+ I++
Sbjct: 329  VSQLLTLMDGLKSR--AHVIVMGATNRPNSIDPALRRFGRFDREIDI 373



 Score = 35.0 bits (79), Expect = 1.1
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 8/170 (4%)
 Frame = +1

Query: 754  ESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL---ELTAV---KNNT 915
            E  + + K G +  +G L YGPPG GK+ +  A+A     +   +   EL  +   ++  
Sbjct: 502  EPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 561

Query: 916  ELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1089
             +R++F     +   ++  +++D                                     
Sbjct: 562  NVREIFDKARQSAPCVLFFDELD----------------------SIATQRGSSSGDAGG 599

Query: 1090 ATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            A    L+ LL  +DG+         II  TN  + +DPAL+R GR+D+ I
Sbjct: 600  AADRVLNQLLTEMDGM--NAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 647

---

>P46508:YME1_SCHMA Protein YME1 homolog - Schistosoma mansoni (Blood fluke)|
          Length = 662

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 11/223 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-------YFLD 870
            DE +  + +++ F  + + + ++G    +G LL GPPG GK+ +  A++        +  
Sbjct: 172  DEVKKELVDVVEFLRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYAS 231

Query: 871  YDVYDLELTAVKNNTELRKLFIETTGKS----IIVIEDIDCSVDLTXXXXXXXXXXXXXX 1038
               +D  L  +   + +R+LF  TT K     ++ I++ID                    
Sbjct: 232  GSSFDEVLVGL-GASRIRQLF--TTAKQNSPCLVFIDEIDS------------------- 269

Query: 1039 XXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRR 1218
                                 T++ LL  +DG  S  G   I++  TN  E LD AL+R 
Sbjct: 270  -----VGGNRTFSPHHPFANQTINQLLAEMDGFQSKEG--IIVLGATNQAEVLDKALLRP 322

Query: 1219 GRMDKHIEMSYCRFEGFKVLAKNYLDVIEHELFGEIQQLLDET 1347
            GR D  I +S   +EG   L   YL  ++     +I++L   T
Sbjct: 323  GRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGT 365

---

>P41836:PRS8_SCHPO 26S protease regulatory subunit 8 homolog - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 403

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + +  +G    +G LLYGPPGTGK+ +  A+A+  D     +  + +      + +  +R
Sbjct: 169  ELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVR 228

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID                                       +
Sbjct: 229  ELFVMAREHAPSIIFMDEID---------------------SIGSSRSDSSGGSGDSEVQ 267

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  +    +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 268  RTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRIDRKIE 313

---

>P54814:PRS8_MANSE 26S protease regulatory subunit 8 - Manduca sexta (Tobacco hawkmoth)|
            (Tobacco hornworm)
          Length = 402

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            + +  +G A  +G LLYGPPGTGK+ +  A+A+     F+     +L    +   + + R
Sbjct: 169  ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 228

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID                                       +
Sbjct: 229  ELFVMAREHAPSIIFMDEID----------------------SIGSSRIESGSGGDSEVQ 266

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  +    +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 267  RTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRIDRKIE 312

---

>O18413:PRS8_DROME 26S protease regulatory subunit 8 - Drosophila melanogaster (Fruit|
            fly)
          Length = 405

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            + +  +G A  +G LLYGPPGTGK+ +  A+A+     F+     +L    +   + + R
Sbjct: 172  ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 231

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID                                       +
Sbjct: 232  ELFVMAREHAPSIIFMDEID----------------------SIGSSRIESGSGGDSEVQ 269

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  +    +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 270  RTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRIDRKIE 315

---

>P78578:PRS6B_ASPNG 26S protease regulatory subunit 6B homolog - Aspergillus niger|
          Length = 423

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 8/188 (4%)
 Frame = +1

Query: 718  KEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAM-----AYFLDYDVY 882
            +EAV   L  F    D Y ++G    RG LLYGPPGTGK+ ++ A+     A F+  +  
Sbjct: 179  REAVELPLTQF----DLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGS 234

Query: 883  DLELTAVKNNTEL-RKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXX 1053
            +     +     + R +F        +II I++ID                         
Sbjct: 235  EFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDA----------------------IA 272

Query: 1054 XXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDK 1233
                          +  L  LLN +DG   +   +  +I  TN  + LDPAL+R GR+D+
Sbjct: 273  TKRFDAQTGADREVQRILLELLNQMDGFEQSSNVK--VIMATNRADTLDPALLRPGRLDR 330

Query: 1234 HIEMSYCR 1257
             IE    R
Sbjct: 331  KIEFPSLR 338

---

>P46466:PRS4_ORYSJ 26S protease regulatory subunit 4 homolog - Oryza sativa subsp.|
            japonica (Rice)
          Length = 448

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            + Y  +G    +G +LYG PGTGK+ +  A+A      FL     +L    + +  +L R
Sbjct: 217  ELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 276

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   +    SI+ I++ID                                       +
Sbjct: 277  ELFRVADELSPSIVFIDEIDA----------------------VGTKRYDAHSGGEREIQ 314

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  S   G+  +I  TN  E LDPAL+R GR+D+ IE
Sbjct: 315  RTMLELLNQLDGFDSR--GDVKVILATNRIESLDPALLRPGRIDRKIE 360

---

>O15381:NVL_HUMAN Nuclear valosin-containing protein-like - Homo sapiens (Human)|
          Length = 856

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 9/179 (5%)
 Frame = +1

Query: 730  VDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV-- 903
            V +++      + Y  +G    RG LL+GPPG GK+ +  A+A  LD  +  +    +  
Sbjct: 277  VCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVS 336

Query: 904  ----KNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXX 1065
                ++  +LR+LF +    +  II I++ID                             
Sbjct: 337  GVSGESEQKLRELFEQAVSNAPCIIFIDEIDA-------------------------ITP 371

Query: 1066 XXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGRMDKHI 1239
                      +  ++ LL  +D L +     R+++   TN  + LDPAL R GR D+ I
Sbjct: 372  KREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREI 430



 Score = 36.2 bits (82), Expect = 0.49
 Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 8/182 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYD-- 885
            D +E +   ++A   + D +  +G     G LL GPPG GK+ +  A+A     +     
Sbjct: 588  DIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 647

Query: 886  ----LELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                L +   ++   +R++F   + +   +I  +++D                       
Sbjct: 648  GPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDA---------------------- 685

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                          A+   ++ LL  +DGL      +  I+  TN  + +DPA++R GR+
Sbjct: 686  ---LCPRRSDRETGASVRVVNQLLTEMDGL--EARQQVFIMAATNRPDIIDPAILRPGRL 740

Query: 1228 DK 1233
            DK
Sbjct: 741  DK 742

---

>Q89AF2:FTSH_BUCBP Cell division protease ftsH - Buchnera aphidicola subsp. Baizongia|
            pistaciae
          Length = 610

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 9/185 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  V EL+ + +    + K+G    +G L+ GPPGTGK+ +  A+A      +F   
Sbjct: 158  DEAKEEVQELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTIS 217

Query: 874  DVYDLELTAVKNNTELRKLFIET--TGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R +F  +      II I++ID                       
Sbjct: 218  GSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDA---------------------- 255

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERII-IFTTNHKEKLDPALIRRGR 1224
                            + TL+ +L  +DG     G E II I  TN  + LDPAL+R GR
Sbjct: 256  VGRQRGAGLGGGHDEREQTLNQMLVEMDGF---DGNEGIILIAATNRPDVLDPALLRPGR 312

Query: 1225 MDKHI 1239
             D+ I
Sbjct: 313  FDRQI 317

---

>O14126:PRS6A_SCHPO 26S protease regulatory subunit 6A - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 438

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 9/183 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYD 885
            E + + ++   +  D + K+G    +G L++GPPGTGK+ +  A A      FL      
Sbjct: 195  EELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQ 254

Query: 886  LELTAVKNNTEL-RKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXX 1056
            L    + +  +L R  F     KS  II I+++D                          
Sbjct: 255  LVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDA----------------------IGT 292

Query: 1057 XXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERI-IIFTTNHKEKLDPALIRRGRMDK 1233
                         + T+  LLN +DG  S    +R+ +I  TN  + LDPAL+R GR+D+
Sbjct: 293  KRFDSEKAGDREVQRTMLELLNQLDGFSS---DDRVKVIAATNRVDTLDPALLRSGRLDR 349

Query: 1234 HIE 1242
             +E
Sbjct: 350  KLE 352

---

>Q9DBY8:NVL_MOUSE Nuclear valosin-containing protein-like - Mus musculus (Mouse)|
          Length = 855

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 9/179 (5%)
 Frame = +1

Query: 730  VDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV-- 903
            V +++      + Y  +G    RG LL+GPPG GK+ +  A+A  LD  +  +    +  
Sbjct: 276  VCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVS 335

Query: 904  ----KNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXX 1065
                ++  +LR+LF +    +  I+ I++ID                             
Sbjct: 336  GVSGESEQKLRELFDQAVSNAPCIVFIDEIDA-------------------------ITP 370

Query: 1066 XXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGRMDKHI 1239
                      +  ++ LL  +D L +     R+++   TN  + LDPAL R GR D+ +
Sbjct: 371  KREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREV 429



 Score = 36.6 bits (83), Expect = 0.37
 Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 8/182 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYD-- 885
            D ++ ++  ++A   + D +  +G     G LL GPPG GK+ +  A+A     +     
Sbjct: 587  DIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVK 646

Query: 886  ----LELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                L +   ++   +R++F   + +   +I  +++D                       
Sbjct: 647  GPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDA---------------------- 684

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                          A+   ++ LL  +DGL +    +  I+  TN  + +DPA++R GR+
Sbjct: 685  ---LCPRRSDRETGASVRVVNQLLTEMDGLETR--QQVFILAATNRPDIIDPAILRPGRL 739

Query: 1228 DK 1233
            DK
Sbjct: 740  DK 741

---

>P0AAI4:FTSH_SHIFL Cell division protease ftsH - Shigella flexneri|
          Length = 644

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 9/203 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  V EL+ +      + K+G    +G L+ GPPGTGK+ +  A+A      +F   
Sbjct: 158  DEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTIS 217

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R +F   +     II I++ID                       
Sbjct: 218  GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA---------------------- 255

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGR 1224
                            + TL+ +L  +DG     G E II+   TN  + LDPAL+R GR
Sbjct: 256  VGRQRGAGLGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGR 312

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYL 1293
             D+ + +      G + + K ++
Sbjct: 313  FDRQVVVGLPDVRGREQILKVHM 335

---

>P63343:FTSH_SALTY Cell division protease ftsH - Salmonella typhimurium|
          Length = 644

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 9/203 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  V EL+ +      + K+G    +G L+ GPPGTGK+ +  A+A      +F   
Sbjct: 158  DEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTIS 217

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R +F   +     II I++ID                       
Sbjct: 218  GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA---------------------- 255

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGR 1224
                            + TL+ +L  +DG     G E II+   TN  + LDPAL+R GR
Sbjct: 256  VGRQRGAGLGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGR 312

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYL 1293
             D+ + +      G + + K ++
Sbjct: 313  FDRQVVVGLPDVRGREQILKVHM 335

---

>P63344:FTSH_SALTI Cell division protease ftsH - Salmonella typhi|
          Length = 644

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 9/203 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  V EL+ +      + K+G    +G L+ GPPGTGK+ +  A+A      +F   
Sbjct: 158  DEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTIS 217

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R +F   +     II I++ID                       
Sbjct: 218  GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA---------------------- 255

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGR 1224
                            + TL+ +L  +DG     G E II+   TN  + LDPAL+R GR
Sbjct: 256  VGRQRGAGLGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGR 312

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYL 1293
             D+ + +      G + + K ++
Sbjct: 313  FDRQVVVGLPDVRGREQILKVHM 335

---

>P0AAI3:FTSH_ECOLI Cell division protease ftsH - Escherichia coli|
          Length = 644

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 9/203 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  V EL+ +      + K+G    +G L+ GPPGTGK+ +  A+A      +F   
Sbjct: 158  DEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTIS 217

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R +F   +     II I++ID                       
Sbjct: 218  GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA---------------------- 255

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGR 1224
                            + TL+ +L  +DG     G E II+   TN  + LDPAL+R GR
Sbjct: 256  VGRQRGAGLGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGR 312

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYL 1293
             D+ + +      G + + K ++
Sbjct: 313  FDRQVVVGLPDVRGREQILKVHM 335

---

>Q8X9L0:FTSH_ECO57 Cell division protease ftsH - Escherichia coli O157:H7|
          Length = 644

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 9/203 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  V EL+ +      + K+G    +G L+ GPPGTGK+ +  A+A      +F   
Sbjct: 158  DEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTIS 217

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R +F   +     II I++ID                       
Sbjct: 218  GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA---------------------- 255

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGR 1224
                            + TL+ +L  +DG     G E II+   TN  + LDPAL+R GR
Sbjct: 256  VGRQRGAGLGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGR 312

Query: 1225 MDKHIEMSYCRFEGFKVLAKNYL 1293
             D+ + +      G + + K ++
Sbjct: 313  FDRQVVVGLPDVRGREQILKVHM 335

---

>O67077:FTSH_AQUAE Cell division protease ftsH homolog - Aquifex aeolicus|
          Length = 634

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 61/214 (28%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
 Frame = +1

Query: 685  TFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-- 858
            TF  +A   + KE V  E++ + +    + K+G    +G LLYG PG GK+ +  A+A  
Sbjct: 153  TFKDVAGIEEVKEEV-KEIIEYLKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGE 211

Query: 859  ---YFLDYDVYD-LELTAVKNNTELRKLFIETTGK---SIIVIEDIDCSVDLTXXXXXXX 1017
                F+     D +E+        +R LF ET  K    II I++ID             
Sbjct: 212  AHVPFISVSGSDFVEMFVGVGAARVRDLF-ETAKKHAPCIIFIDEIDA------------ 258

Query: 1018 XXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKL 1197
                                      + TL+ LL  +DG  ++ G   I+I  TN  + L
Sbjct: 259  ---------VGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDG--IIVIAATNRPDIL 307

Query: 1198 DPALIRRGRMDKHIEMS----YCRFEGFKVLAKN 1287
            DPAL+R GR D+ I +       R+E  KV A+N
Sbjct: 308  DPALLRPGRFDRQIFIPKPDVRGRYEILKVHARN 341

---

>Q68XR9:FTSH_RICTY Cell division protease ftsH homolog - Rickettsia typhi|
          Length = 637

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 8/207 (3%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL- 888
            DE +  + E++ F      + K+G    +G LL GPPGTGK+ +  A+A   +   + + 
Sbjct: 161  DEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSIS 220

Query: 889  -----ELTAVKNNTELRKLFIE--TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                 E+      + +R +F +       II I++ID                       
Sbjct: 221  GSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA---------------------- 258

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ +L  +DG  +  G   +II  TN  + LD AL+R GR 
Sbjct: 259  VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEG--VVIIAATNRPDVLDRALLRPGRF 316

Query: 1228 DKHIEMSYCRFEGFKVLAKNYLDVIEH 1308
            D+ I ++     G + + K +L  I++
Sbjct: 317  DRQIAVANPDINGREQILKVHLKKIKY 343

---

>Q9ZEA2:FTSH_RICPR Cell division protease ftsH homolog - Rickettsia prowazekii|
          Length = 637

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 8/207 (3%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL- 888
            DE +  + E++ F      + K+G    +G LL GPPGTGK+ +  A+A   +   + + 
Sbjct: 161  DEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSIS 220

Query: 889  -----ELTAVKNNTELRKLFIE--TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                 E+      + +R +F +       II I++ID                       
Sbjct: 221  GSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA---------------------- 258

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ +L  +DG  +  G   +II  TN  + LD AL+R GR 
Sbjct: 259  VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEG--VVIIAATNRPDVLDRALLRPGRF 316

Query: 1228 DKHIEMSYCRFEGFKVLAKNYLDVIEH 1308
            D+ I ++     G + + K +L  I++
Sbjct: 317  DRQIAVANPDINGREQILKVHLKKIKY 343

---

>Q4UN68:FTSH_RICFE Cell division protease ftsH homolog - Rickettsia felis (Rickettsia|
            azadi)
          Length = 635

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 8/207 (3%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL- 888
            DE +  + E++ F      + K+G    +G LL GPPGTGK+ +  A+A   +   + + 
Sbjct: 161  DEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSIS 220

Query: 889  -----ELTAVKNNTELRKLFIE--TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                 E+      + +R +F +       II I++ID                       
Sbjct: 221  GSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA---------------------- 258

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ +L  +DG  +  G   +II  TN  + LD AL+R GR 
Sbjct: 259  VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEG--VVIIAATNRPDVLDRALLRPGRF 316

Query: 1228 DKHIEMSYCRFEGFKVLAKNYLDVIEH 1308
            D+ I ++     G + + K +L  I++
Sbjct: 317  DRQIAVANPDINGREQILKVHLKKIKY 343

---

>Q92JJ9:FTSH_RICCN Cell division protease ftsH homolog - Rickettsia conorii|
          Length = 637

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 8/207 (3%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL- 888
            DE +  + E++ F      + K+G    +G LL GPPGTGK+ +  A+A   +   + + 
Sbjct: 161  DEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSIS 220

Query: 889  -----ELTAVKNNTELRKLFIE--TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                 E+      + +R +F +       II I++ID                       
Sbjct: 221  GSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA---------------------- 258

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ +L  +DG  +  G   +II  TN  + LD AL+R GR 
Sbjct: 259  VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEG--VVIIAATNRPDVLDRALLRPGRF 316

Query: 1228 DKHIEMSYCRFEGFKVLAKNYLDVIEH 1308
            D+ I ++     G + + K +L  I++
Sbjct: 317  DRQIAVANPDINGREQILKVHLKKIKY 343

---

>P54812:TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2 - Caenorhabditis|
            elegans
          Length = 810

 Score = 46.6 bits (109), Expect = 4e-04
 Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    RG LL+GPPGTGK+ +  A+A      +FL      +   + ++ + LRK 
Sbjct: 235  FKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKA 294

Query: 931  FIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F E    S  I+ I++ID                                       K  
Sbjct: 295  FAECEKNSPAILFIDEIDA-------------------------IAPKREKAHGEVEKRI 329

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM----SYCRFEGFK 1272
            +S LL  +DGL +      ++I  TN    +D AL R GR D+ I++    +  R E  +
Sbjct: 330  VSQLLTLMDGLKTR--AHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR 387

Query: 1273 VLAKN 1287
            +  KN
Sbjct: 388  IHTKN 392



 Score = 35.0 bits (79), Expect = 1.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +1

Query: 754 ESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           E  + Y K G    RG L YGPPG GK+ +  A+A
Sbjct: 503 EHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 537

---

>P33297:PRS6A_YEAST 26S protease regulatory subunit 6A - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 434

 Score = 46.6 bits (109), Expect = 4e-04
 Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 26/214 (12%)
 Frame = +1

Query: 679  PATFDTL--AMHPDEK---------------EAVVDELMAFQESKDYYAKVGKAWKRGYL 807
            P+ FD+   AM  DEK               E +V+ ++   +  D +  +G    +G L
Sbjct: 160  PSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGAL 219

Query: 808  LYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-RKLFIETTGKS--IIV 963
            +YGPPGTGK+ +  A A      FL      L    +    +L R  F     K+  II 
Sbjct: 220  MYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIF 279

Query: 964  IEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWS 1143
            I+++D                                       + T+  LLN +DG  S
Sbjct: 280  IDELDA----------------------IGTKRFDSEKSGDREVQRTMLELLNQLDGFSS 317

Query: 1144 ACGGERI-IIFTTNHKEKLDPALIRRGRMDKHIE 1242
                +R+ ++  TN  + LDPAL+R GR+D+ IE
Sbjct: 318  ---DDRVKVLAATNRVDVLDPALLRSGRLDRKIE 348

---

>Q1RGP0:FTSH_RICBR Cell division protease ftsH homolog - Rickettsia bellii (strain|
            RML369-C)
          Length = 638

 Score = 46.6 bits (109), Expect = 4e-04
 Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 8/207 (3%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL- 888
            DE +  + E++ F      + K+G    +G LL GPPGTGK+ +  A+A   +   + + 
Sbjct: 161  DEAKDELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSIS 220

Query: 889  -----ELTAVKNNTELRKLFIE--TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                 E+      + +R +F +       II I++ID                       
Sbjct: 221  GSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA---------------------- 258

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ +L  +DG  +  G   +II  TN  + LD AL+R GR 
Sbjct: 259  VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEG--VVIIAATNRPDVLDNALLRPGRF 316

Query: 1228 DKHIEMSYCRFEGFKVLAKNYLDVIEH 1308
            D+ I +S    +G + + + +L  +++
Sbjct: 317  DRQITVSNPDIDGREKILQVHLKKVKY 343

---

>P72991:FTSH4_SYNY3 Cell division protease ftsH homolog 4 - Synechocystis sp. (strain PCC|
            6803)
          Length = 616

 Score = 46.6 bits (109), Expect = 4e-04
 Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 8/184 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            ++ +  + E++ F ++ D + ++G    +G LL GPPGTGK+ +  A+A      +F   
Sbjct: 167  EQAKLELTEVVDFLKNADRFTELGAKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSIS 226

Query: 874  DVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R LF +    +  I+ I++ID                       
Sbjct: 227  GSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDA---------------------- 264

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG     G   II+  TN  + LD AL+R GR 
Sbjct: 265  VGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTG--IIIVAATNRPDVLDSALMRPGRF 322

Query: 1228 DKHI 1239
            D+ +
Sbjct: 323  DRQV 326

---

>P46468:CDAT_PLAF7 Putative cell division cycle ATPase - Plasmodium falciparum (isolate|
            3D7)
          Length = 1229

 Score = 46.6 bits (109), Expect = 4e-04
 Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 15/216 (6%)
 Frame = +1

Query: 685  TFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYF 864
            T++ +    + KE + + ++   E K  Y K    + +G LLYGPPG GK+ +  A+A  
Sbjct: 932  TWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANE 991

Query: 865  LDYDVYDL---ELTAV---KNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXX 1020
               +   +   EL  +   ++   +R LF +    S  II  ++ID              
Sbjct: 992  CKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEID-------------- 1037

Query: 1021 XXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGER---IIIFTTNHKE 1191
                                   A+   ++ +L  IDG+      E+    II  TN  +
Sbjct: 1038 ----------SLAKERNSNTNNDASDRVINQILTEIDGI-----NEKKTIFIIAATNRPD 1082

Query: 1192 KLDPALIRRGRMDKHIEMSY----CRFEGFKVLAKN 1287
             LD AL R GR+DK I +S      R+  FK + KN
Sbjct: 1083 ILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKN 1118



 Score = 45.1 bits (105), Expect = 0.001
 Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 8/169 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + +  +G +  +G L++G PGTGK+++  A+A   +   Y +    +      ++  +LR
Sbjct: 551  EIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLR 610

Query: 925  KLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            K+F + + K+  II I++ID   +                                   K
Sbjct: 611  KIFKKASEKTPCIIFIDEIDSIAN-------------------------KRSKSNNELEK 645

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
              +S LL  +DGL        +++  TN    +DPAL R GR D+ IE+
Sbjct: 646  RVVSQLLTLMDGLKK--NNNVLVLAATNRPNSIDPALRRFGRFDREIEI 692

---

>Q9UQ90:SPG7_HUMAN Paraplegin - Homo sapiens (Human)|
          Length = 795

 Score = 46.2 bits (108), Expect = 5e-04
 Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 8/191 (4%)
 Frame = +1

Query: 691  DTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA---- 858
            D   MH  E +  V E + + +S + + ++G    +G LL GPPG GK+ +  A+A    
Sbjct: 310  DVAGMH--EAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQ 367

Query: 859  --YFLDYDVYDLELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXX 1026
              +        +E+        +R LF E   ++  I+ I++ID                
Sbjct: 368  VPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDA--------------- 412

Query: 1027 XXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPA 1206
                                   + TL+ LL  +DG+ +      I++ +TN  + LD A
Sbjct: 413  ------VGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTT--DHVIVLASTNRADILDGA 464

Query: 1207 LIRRGRMDKHI 1239
            L+R GR+D+H+
Sbjct: 465  LMRPGRLDRHV 475

---

>P46470:PRS8_XENLA 26S protease regulatory subunit 8 - Xenopus laevis (African clawed|
            frog)
          Length = 461

 Score = 46.2 bits (108), Expect = 5e-04
 Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            +++  +G A  +G LLYGPPGTGK+ +  A+A+  D     +  + +      +    +R
Sbjct: 168  EHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVR 227

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID                                       +
Sbjct: 228  ELFVMAREHAPSIIFMDEID-----------------------SIGSRLEGGSGGDSEVQ 264

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  +    +  +I  TN  + LD AL+R GR+D+ IE
Sbjct: 265  RTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKIE 310

---

>P33298:PRS6B_YEAST 26S protease regulatory subunit 6B homolog - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 428

 Score = 46.2 bits (108), Expect = 5e-04
 Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 8/173 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAM-----AYFLDYDVYDLELTAVKNNTEL-R 924
            D Y ++G    RG LLYGPPGTGK+ ++ A+     A F+  +  +     +     + R
Sbjct: 196  DLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVR 255

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F        SII I+++D                                       +
Sbjct: 256  DVFRLARENAPSIIFIDEVD----------------------SIATKRFDAQTGSDREVQ 293

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCR 1257
              L  LL  +DG   +   + I+   TN  + LDPAL+R GR+D+ IE  Y R
Sbjct: 294  RILIELLTQMDGFDQSTNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPYLR 344

---

>P33299:PRS7_YEAST 26S protease regulatory subunit 7 homolog - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 467

 Score = 45.8 bits (107), Expect = 6e-04
 Identities = 49/178 (27%), Positives = 70/178 (39%), Gaps = 8/178 (4%)
 Frame = +1

Query: 757  SKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYD---VYDLELTAV---KNNTE 918
            S + +A +G    +G LLYGPPGTGK+    A+A   D     V   EL      +    
Sbjct: 231  SPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 290

Query: 919  LRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 1092
            +R+LF    T    II  ++ID                                      
Sbjct: 291  VRELFEMARTKKACIIFFDEIDA----------------------VGGARFDDGAGGDNE 328

Query: 1093 TKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG 1266
             + T+  L+  +DG      G   ++F TN    LDPAL+R GR+D+ +E S    EG
Sbjct: 329  VQRTMLELITQLDGFDPR--GNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEG 384

---

>P53549:PRS10_YEAST 26S protease subunit RPT4 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 437

 Score = 45.8 bits (107), Expect = 6e-04
 Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 9/207 (4%)
 Frame = +1

Query: 652  VWSHVPFEH-PATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGT 828
            V++   FE    TFD +    ++   + + +    ++ + + +VG    +G LLYGPPGT
Sbjct: 167  VYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGT 226

Query: 829  GKSTMIAAMAYFLDYDVYDLELTAV------KNNTELRKLFIETTGKS--IIVIEDIDCS 984
            GK+ +  A+A  +  +      + +      ++   +R++F         II ++++D  
Sbjct: 227  GKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDA- 285

Query: 985  VDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERI 1164
                                                 + TL  LL  +DG  +   G+  
Sbjct: 286  ---------------------IGGRRFSEGTSADREIQRTLMELLTQMDGFDNL--GQTK 322

Query: 1165 IIFTTNHKEKLDPALIRRGRMDKHIEM 1245
            II  TN  + LDPAL+R GR+D+ +E+
Sbjct: 323  IIMATNRPDTLDPALLRPGRLDRKVEI 349

---

>Q8SQI9:PRS6B_ENCCU 26S protease regulatory subunit 6B homolog - Encephalitozoon cuniculi|
          Length = 387

 Score = 45.4 bits (106), Expect = 8e-04
 Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 1/161 (0%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVK-NNTELRKLFIE 939
            D Y ++G    +G LLYGPPGTGK+ ++ A+A          + T ++ N +E  + ++ 
Sbjct: 158  DLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVA-------NHTKATFIRVNGSEFVQKYL- 209

Query: 940  TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLL 1119
              G+   ++ D+                                        +  L  LL
Sbjct: 210  --GEGPRMVRDV-----FRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELL 262

Query: 1120 NFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
            N +DG   A   +  +I  TN  + +DPAL+R GR+D+ IE
Sbjct: 263  NQMDGFDPAANVK--VIMATNRADTIDPALLRPGRLDRKIE 301

---

>P60373:RFCL_NANEQ Replication factor C large subunit - Nanoarchaeum equitans|
          Length = 430

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
 Frame = +1

Query: 709 PDEKEAVVDELMAFQESKDYYAKVGKAWK-RGYLLYGPPGTGKSTMIAAMAYFLDYDVYD 885
           P   + V ++  A Q  +DY     K +K +  LLYGPPGTGK++ + A+A  L Y+V +
Sbjct: 39  PKTLDEVENQEQAKQILRDYVINYKKKYKGKALLLYGPPGTGKTSSVYALANELGYEVLE 98

Query: 886 LELTAVKNNTELRKLFIETT-GK------SIIVIEDID 978
           +  +  ++   +  +  E + GK       II+++++D
Sbjct: 99  VNASDERDAIHIHHIVGEASKGKPLFHKGRIILVDEVD 136

---

>P62198:PRS8_RAT 26S protease regulatory subunit 8 - Rattus norvegicus (Rat)|
          Length = 406

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + +  +G A  +G LLYGPPGTGK+ +  A+A+  D     +  + +      +    +R
Sbjct: 173  ELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVR 232

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID                                       +
Sbjct: 233  ELFVMAREHAPSIIFMDEID----------------------SIGSSRLEGGSGGDSEVQ 270

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  +    +  +I  TN  + LD AL+R GR+D+ IE
Sbjct: 271  RTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKIE 316

---

>P62197:PRS8_PIG 26S protease regulatory subunit 8 - Sus scrofa (Pig)|
          Length = 406

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + +  +G A  +G LLYGPPGTGK+ +  A+A+  D     +  + +      +    +R
Sbjct: 173  ELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVR 232

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID                                       +
Sbjct: 233  ELFVMAREHAPSIIFMDEID----------------------SIGSSRLEGGSGGDSEVQ 270

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  +    +  +I  TN  + LD AL+R GR+D+ IE
Sbjct: 271  RTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKIE 316

---

>P62196:PRS8_MOUSE 26S protease regulatory subunit 8 - Mus musculus (Mouse)|
          Length = 406

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + +  +G A  +G LLYGPPGTGK+ +  A+A+  D     +  + +      +    +R
Sbjct: 173  ELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVR 232

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID                                       +
Sbjct: 233  ELFVMAREHAPSIIFMDEID----------------------SIGSSRLEGGSGGDSEVQ 270

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  +    +  +I  TN  + LD AL+R GR+D+ IE
Sbjct: 271  RTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKIE 316

---

>P62195:PRS8_HUMAN 26S protease regulatory subunit 8 - Homo sapiens (Human)|
          Length = 406

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + +  +G A  +G LLYGPPGTGK+ +  A+A+  D     +  + +      +    +R
Sbjct: 173  ELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVR 232

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID                                       +
Sbjct: 233  ELFVMAREHAPSIIFMDEID----------------------SIGSSRLEGGSGGDSEVQ 270

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  +    +  +I  TN  + LD AL+R GR+D+ IE
Sbjct: 271  RTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKIE 316

---

>P62194:PRS8_BOVIN 26S protease regulatory subunit 8 - Bos taurus (Bovine)|
          Length = 406

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + +  +G A  +G LLYGPPGTGK+ +  A+A+  D     +  + +      +    +R
Sbjct: 173  ELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVR 232

Query: 925  KLFI--ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF+       SII +++ID                                       +
Sbjct: 233  ELFVMAREHAPSIIFMDEID----------------------SIGSSRLEGGSGGDSEVQ 270

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
             T+  LLN +DG  +    +  +I  TN  + LD AL+R GR+D+ IE
Sbjct: 271  RTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKIE 316

---

>Q41365:PRS7_SPIOL 26S protease regulatory subunit 7 - Spinacia oleracea (Spinach)|
          Length = 426

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 8/192 (4%)
 Frame = +1

Query: 715  EKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYD 885
            EK   V EL      K  + K+G    +G L YGPPGTGK+ +  A+A   D     V  
Sbjct: 178  EKMREVVELPMLHPEK--FVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIG 235

Query: 886  LELTAV---KNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXX 1050
             EL      +    +R+LF     K   I+  +++D                        
Sbjct: 236  SELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA----------------------I 273

Query: 1051 XXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMD 1230
                           + T+  ++N +DG + A G  ++++  TN  + LDPAL+R GR+D
Sbjct: 274  GGARFDDGVGGDNEVQRTMLEIVNQLDG-FDARGNIKVLM-ATNRPDTLDPALLRPGRLD 331

Query: 1231 KHIEMSYCRFEG 1266
            + +E      EG
Sbjct: 332  RKVEFGLPDLEG 343

---

>Q9FXT9:PRS7_ORYSJ 26S protease regulatory subunit 7 - Oryza sativa subsp. japonica|
            (Rice)
          Length = 426

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 8/192 (4%)
 Frame = +1

Query: 715  EKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYD 885
            EK   V EL      K  + K+G    +G L YGPPGTGK+ +  A+A   D     V  
Sbjct: 178  EKMREVVELPMLHPEK--FVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIG 235

Query: 886  LELTAV---KNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXX 1050
             EL      +    +R+LF     K   I+  +++D                        
Sbjct: 236  SELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA----------------------I 273

Query: 1051 XXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMD 1230
                           + T+  ++N +DG + A G  ++++  TN  + LDPAL+R GR+D
Sbjct: 274  GGARFDDGVGGDNEVQRTMLEIVNQLDG-FDARGNIKVLM-ATNRPDTLDPALLRPGRLD 331

Query: 1231 KHIEMSYCRFEG 1266
            + +E      EG
Sbjct: 332  RKVEFGLPDLEG 343

---

>P62335:PRS10_SPETR 26S protease regulatory subunit S10B - Spermophilus tridecemlineatus|
            (Thirteen-lined ground squirrel)
          Length = 389

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + + +VG    +G LLYGPPGTGK+ +  A+A  LD +   +  +++      ++   +R
Sbjct: 157  ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            ++F         II +++ID                                       +
Sbjct: 217  EMFNYARDHQPCIIFMDEIDA----------------------IGGRRFSEGTSADREIQ 254

Query: 1099 VTLSGLLNFIDGLWSACGGERI-IIFTTNHKEKLDPALIRRGRMDKHIEM 1245
             TL  LLN +DG  +     R+ +I  TN  + LDPAL+R GR+D+ I +
Sbjct: 255  RTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301

---

>P62334:PRS10_MOUSE 26S protease regulatory subunit S10B - Mus musculus (Mouse)|
          Length = 389

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + + +VG    +G LLYGPPGTGK+ +  A+A  LD +   +  +++      ++   +R
Sbjct: 157  ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            ++F         II +++ID                                       +
Sbjct: 217  EMFNYARDHQPCIIFMDEIDA----------------------IGGRRFSEGTSADREIQ 254

Query: 1099 VTLSGLLNFIDGLWSACGGERI-IIFTTNHKEKLDPALIRRGRMDKHIEM 1245
             TL  LLN +DG  +     R+ +I  TN  + LDPAL+R GR+D+ I +
Sbjct: 255  RTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301

---

>P62333:PRS10_HUMAN 26S protease regulatory subunit S10B - Homo sapiens (Human)|
          Length = 389

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + + +VG    +G LLYGPPGTGK+ +  A+A  LD +   +  +++      ++   +R
Sbjct: 157  ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            ++F         II +++ID                                       +
Sbjct: 217  EMFNYARDHQPCIIFMDEIDA----------------------IGGRRFSEGTSADREIQ 254

Query: 1099 VTLSGLLNFIDGLWSACGGERI-IIFTTNHKEKLDPALIRRGRMDKHIEM 1245
             TL  LLN +DG  +     R+ +I  TN  + LDPAL+R GR+D+ I +
Sbjct: 255  RTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301

---

>Q2KIW6:PRS10_BOVIN 26S protease regulatory subunit S10B - Bos taurus (Bovine)|
          Length = 389

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + + +VG    +G LLYGPPGTGK+ +  A+A  LD +   +  +++      ++   +R
Sbjct: 157  ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            ++F         II +++ID                                       +
Sbjct: 217  EMFNYARDHQPCIIFMDEIDA----------------------IGGRRFSEGTSADREIQ 254

Query: 1099 VTLSGLLNFIDGLWSACGGERI-IIFTTNHKEKLDPALIRRGRMDKHIEM 1245
             TL  LLN +DG  +     R+ +I  TN  + LDPAL+R GR+D+ I +
Sbjct: 255  RTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301

---

>Q9MUP8:YCF2_MESVI Protein ycf2 - Mesostigma viride|
          Length = 890

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 8/177 (4%)
 Frame = +1

Query: 787  AWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVK------NNTELRKLF--IET 942
            ++  GYL  GPPGTGK+ M  AM+Y  +     +E +  +       N  +  LF  I+ 
Sbjct: 376  SYPMGYLFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQN 435

Query: 943  TGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLN 1122
                I+ I++ID   +                                  +   L   L 
Sbjct: 436  ISPCILYIDEIDSIAE----RREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLI 491

Query: 1123 FIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEGFKVLAKNYL 1293
            ++DG       + III  TN  E LD A++R GR D+ I  S   FE  K + + +L
Sbjct: 492  YMDGYKKR--NDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFL 546

---

>Q58576:PSMR_METJA Proteasome-activating nucleotidase - Methanococcus jannaschii|
          Length = 430

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVK-NNTELRKLFIE 939
            + + KVG    +G LLYGPPGTGK+ +  A+A        +   T ++   +EL K FI 
Sbjct: 194  ELFEKVGIEPPKGILLYGPPGTGKTLLAKAVA-------TETNATFIRVVGSELVKKFI- 245

Query: 940  TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLL 1119
              G+   +++DI                                        + TL  LL
Sbjct: 246  --GEGASLVKDI-----FKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLL 298

Query: 1120 NFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM 1245
              +DG      G+  II  TN  + LDPA++R GR D+ IE+
Sbjct: 299  AEMDGF--DARGDVKIIGATNRPDILDPAILRPGRFDRIIEV 338

---

>O28303:PSMR_ARCFU Proteasome-activating nucleotidase - Archaeoglobus fulgidus|
          Length = 398

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 8/176 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAM-----AYFLDYDVYDLELTAVKNNTEL-R 924
            + +A+VG    +G LLYGPPGTGK+ +  A+     A F+     +     +     L R
Sbjct: 165  ELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVR 224

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            ++F   +    SII I+++D                                       +
Sbjct: 225  EVFQLAKEKAPSIIFIDELDA----------------------IAARRTNSDTSGDREVQ 262

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG 1266
             T+  LL  +DG      G+  +I  TN  + LDPA++R GR D+ IE+    FEG
Sbjct: 263  RTMMQLLAELDGFDPR--GDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEG 316

---

>Q63347:PRS7_RAT 26S protease regulatory subunit 7 - Rattus norvegicus (Rat)|
          Length = 433

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELRKL 930
            +  +G    +G LL+GPPGTGK+    A+A   D     V   EL      +    +R+L
Sbjct: 201  FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVREL 260

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F    T    +I  ++ID                                       + T
Sbjct: 261  FEMARTKKACLIFFDEIDA----------------------IGGARFDDGAGGDNEVQRT 298

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG----FK 1272
            +  L+N +DG      G   ++  TN  + LDPAL+R GR+D+ IE S    EG    FK
Sbjct: 299  MLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356

Query: 1273 VLAKN 1287
            + A++
Sbjct: 357  IHARS 361

---

>P40327:PRS4_YEAST 26S protease regulatory subunit 4 homolog - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 437

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 8/167 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTELRK 927
            + Y ++G    +G +LYG PGTGK+ +  A+A      FL     +L    + +   L +
Sbjct: 206  ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCR 265

Query: 928  LFIETTGK---SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
               +  G+   SI+ I++ID                                       +
Sbjct: 266  QIFKVAGENAPSIVFIDEIDA----------------------IGTKRYDSNSGGEREIQ 303

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
             T+  LLN +DG      G+  +I  TN  E LDPALIR GR+D+ I
Sbjct: 304  RTMLELLNQLDGFDDR--GDVKVIMATNKIETLDPALIRPGRIDRKI 348

---

>Q7SGP2:PEX6_NEUCR Peroxisomal biogenesis factor 6 - Neurospora crassa|
          Length = 1381

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 2/185 (1%)
 Frame = +1

Query: 685  TFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYF 864
            T+D +    + K+A+ + +    E  + +AK G   + G L YGPPGTGK+ +  A+A  
Sbjct: 989  TWDDVGGLGNVKDAITETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIA-- 1045

Query: 865  LDYDVYDLELTAVKNNTELRKLFIETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXX 1044
                 Y L   +VK   EL  ++I   G+S   +  +                       
Sbjct: 1046 ---TEYSLNFFSVK-GPELLNMYI---GESEANVRRV------FQRARDARPCVVFFDEL 1092

Query: 1045 XXXXXXXXXXXXXXXATKVTLSGLLNFIDGL--WSACGGERIIIFTTNHKEKLDPALIRR 1218
                                +S LL  +DG+      GG   +I  TN  + LDPAL+R 
Sbjct: 1093 DSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRP 1152

Query: 1219 GRMDK 1233
            GR DK
Sbjct: 1153 GRFDK 1157

---

>P71377:FTSH1_HAEIN Cell division protease ftsH homolog 1 - Haemophilus influenzae|
          Length = 635

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 8/202 (3%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            DE +  V E++ F    + +  +G    +G L+ GPPGTGK+ +  A+A      +F   
Sbjct: 157  DEAKEEVGEIVDFLRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIAGEAKVPFFTIS 216

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                +E+      + +R +F   +     +I I++ID                       
Sbjct: 217  GSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDA---------------------- 254

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ +L  +DG     G   I+I  TN  + LDPAL R GR 
Sbjct: 255  VGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDG--VIVIAATNRPDVLDPALTRPGRF 312

Query: 1228 DKHIEMSYCRFEGFKVLAKNYL 1293
            D+ + +     +G + + K ++
Sbjct: 313  DRQVVVGLPDVKGREQILKVHM 334

---

>O57940:PSMR_PYRHO Proteasome-activating nucleotidase - Pyrococcus horikoshii|
          Length = 399

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 49/176 (27%), Positives = 70/176 (39%), Gaps = 8/176 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            + + +VG    +G LLYGPPG GK+ M  A+A+     F+     +L    +     L  
Sbjct: 164  ELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVH 223

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   +    +II I++ID                                        
Sbjct: 224  ELFELAKEKAPTIIFIDEIDA----------------------IGAKRMDETTGGEREVN 261

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG 1266
             TL  LL  +DG      G   +I  TN  + LDPAL+R GR D+ IE+    FEG
Sbjct: 262  RTLMQLLAEMDGFDPR--GNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEG 315

---

>Q9V287:PSMR_PYRAB Proteasome-activating nucleotidase - Pyrococcus abyssi|
          Length = 399

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 49/176 (27%), Positives = 70/176 (39%), Gaps = 8/176 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            + + +VG    +G LLYGPPG GK+ M  A+A+     F+     +L    +     L  
Sbjct: 164  ELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVH 223

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   +    +II I++ID                                        
Sbjct: 224  ELFELAKEKAPTIIFIDEIDA----------------------IGAKRMDETTGGEREVN 261

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG 1266
             TL  LL  +DG      G   +I  TN  + LDPAL+R GR D+ IE+    FEG
Sbjct: 262  RTLMQLLAEMDGFDPR--GNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEG 315

---

>P46472:PRS7_XENLA 26S protease regulatory subunit 7 - Xenopus laevis (African clawed|
            frog)
          Length = 433

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELRKL 930
            +  +G    +G LL+GPPGTGK+    A+A   D     V   EL      +    +R+L
Sbjct: 201  FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 260

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F    T    +I  ++ID                                       + T
Sbjct: 261  FEMARTKKACLIFFDEIDA----------------------IGGARFDDGAGGDNEVQRT 298

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG----FK 1272
            +  L+N +DG      G   ++  TN  + LDPAL+R GR+D+ IE S    EG    FK
Sbjct: 299  MLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356

Query: 1273 VLAKN 1287
            + A++
Sbjct: 357  IHARS 361

---

>P46471:PRS7_MOUSE 26S protease regulatory subunit 7 - Mus musculus (Mouse)|
          Length = 433

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELRKL 930
            +  +G    +G LL+GPPGTGK+    A+A   D     V   EL      +    +R+L
Sbjct: 201  FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 260

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F    T    +I  ++ID                                       + T
Sbjct: 261  FEMARTKKACLIFFDEIDA----------------------IGGARFDDGAGGDNEVQRT 298

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG----FK 1272
            +  L+N +DG      G   ++  TN  + LDPAL+R GR+D+ IE S    EG    FK
Sbjct: 299  MLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356

Query: 1273 VLAKN 1287
            + A++
Sbjct: 357  IHARS 361

---

>Q4R4R0:PRS7_MACFA 26S protease regulatory subunit 7 - Macaca fascicularis (Crab eating|
            macaque) (Cynomolgus monkey)
          Length = 433

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELRKL 930
            +  +G    +G LL+GPPGTGK+    A+A   D     V   EL      +    +R+L
Sbjct: 201  FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 260

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F    T    +I  ++ID                                       + T
Sbjct: 261  FEMARTKKACLIFFDEIDA----------------------IGGARFDDGAGGDNEVQRT 298

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG----FK 1272
            +  L+N +DG      G   ++  TN  + LDPAL+R GR+D+ IE S    EG    FK
Sbjct: 299  MLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356

Query: 1273 VLAKN 1287
            + A++
Sbjct: 357  IHARS 361

---

>P35998:PRS7_HUMAN 26S protease regulatory subunit 7 - Homo sapiens (Human)|
          Length = 433

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELRKL 930
            +  +G    +G LL+GPPGTGK+    A+A   D     V   EL      +    +R+L
Sbjct: 201  FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 260

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F    T    +I  ++ID                                       + T
Sbjct: 261  FEMARTKKACLIFFDEIDA----------------------IGGARFDDGAGGDNEVQRT 298

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG----FK 1272
            +  L+N +DG      G   ++  TN  + LDPAL+R GR+D+ IE S    EG    FK
Sbjct: 299  MLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356

Query: 1273 VLAKN 1287
            + A++
Sbjct: 357  IHARS 361

---

>Q5E9F9:PRS7_BOVIN 26S protease regulatory subunit 7 - Bos taurus (Bovine)|
          Length = 433

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELRKL 930
            +  +G    +G LL+GPPGTGK+    A+A   D     V   EL      +    +R+L
Sbjct: 201  FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 260

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F    T    +I  ++ID                                       + T
Sbjct: 261  FEMARTKKACLIFFDEIDA----------------------IGGARFDDGAGGDNEVQRT 298

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG----FK 1272
            +  L+N +DG      G   ++  TN  + LDPAL+R GR+D+ IE S    EG    FK
Sbjct: 299  MLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356

Query: 1273 VLAKN 1287
            + A++
Sbjct: 357  IHARS 361

---

>P34123:PRS6B_DICDI 26S protease regulatory subunit 6B homolog - Dictyostelium discoideum|
            (Slime mold)
          Length = 403

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 8/166 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-RKL 930
            Y ++G    RG LLYGPPGTGK+ +  A+A+     F+     +     +     L R +
Sbjct: 176  YKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDV 235

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F        +II I++ID                                       +  
Sbjct: 236  FRLARENSPAIIFIDEIDA----------------------IATKRFDAQTGADREVQRI 273

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
            L  LLN +DG   +   +  +I  TN ++ LDPAL+R GR+D+ IE
Sbjct: 274  LMELLNQMDGFDVSVNVK--VIMATNRQDTLDPALLRPGRLDRKIE 317

---

>Q6PL18:ATAD2_HUMAN ATPase family AAA domain-containing protein 2 - Homo sapiens (Human)|
          Length = 1390

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 48/176 (27%), Positives = 68/176 (38%), Gaps = 13/176 (7%)
 Frame = +1

Query: 796  RGYLLYGPPGTGKSTMIAAM-----------AYFLDYDVYDLELTAVKNNTELRKLFIET 942
            RG L YGPPGTGK+ +  A+           A+F+      L     ++  +LR LF + 
Sbjct: 461  RGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA 520

Query: 943  --TGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGL 1116
                 SII  ++ID    +                                     +S L
Sbjct: 521  YQMRPSIIFFDEIDGLAPVRSSRQDQIH-------------------------SSIVSTL 555

Query: 1117 LNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEGFKVLAK 1284
            L  +DGL S   GE ++I  TN  + +DPAL R GR D+    S    E  K + K
Sbjct: 556  LALMDGLDSR--GEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILK 609

---

>Q8U4H3:PSMR_PYRFU Proteasome-activating nucleotidase - Pyrococcus furiosus|
          Length = 396

 Score = 43.9 bits (102), Expect = 0.002
 Identities = 49/176 (27%), Positives = 70/176 (39%), Gaps = 8/176 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            + + +VG    +G LLYGPPG GK+ M  A+A+     F+     +L    +     L  
Sbjct: 161  ELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVH 220

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   +    +II I++ID                                        
Sbjct: 221  ELFELAKEKAPTIIFIDEIDA----------------------IGAKRLDETTGGEREVN 258

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG 1266
             TL  LL  +DG      G   +I  TN  + LDPAL+R GR D+ IE+    FEG
Sbjct: 259  RTLMQLLAEMDGFDPR--GNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEG 312

---

>Q63569:PRS6A_RAT 26S protease regulatory subunit 6A - Rattus norvegicus (Rat)|
          Length = 439

 Score = 43.9 bits (102), Expect = 0.002
 Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 8/182 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYD 885
            + +V+ ++     K+ +  +G    +G L+YGPPGTGK+ +  A A      FL      
Sbjct: 196  QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 255

Query: 886  LELTAVKNNTEL-RKLFIETTGK--SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXX 1056
            L    + +  +L R  F     K  SII I+++D                          
Sbjct: 256  LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA----------------------IGT 293

Query: 1057 XXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKH 1236
                         + T+  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ 
Sbjct: 294  KRFDSEKAGDREVQRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 351

Query: 1237 IE 1242
            IE
Sbjct: 352  IE 353

---

>O88685:PRS6A_MOUSE 26S protease regulatory subunit 6A - Mus musculus (Mouse)|
          Length = 442

 Score = 43.9 bits (102), Expect = 0.002
 Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 8/182 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYD 885
            + +V+ ++     K+ +  +G    +G L+YGPPGTGK+ +  A A      FL      
Sbjct: 199  QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 258

Query: 886  LELTAVKNNTEL-RKLFIETTGK--SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXX 1056
            L    + +  +L R  F     K  SII I+++D                          
Sbjct: 259  LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA----------------------IGT 296

Query: 1057 XXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKH 1236
                         + T+  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ 
Sbjct: 297  KRFDSEKAGDREVQRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 354

Query: 1237 IE 1242
            IE
Sbjct: 355  IE 356

---

>P17980:PRS6A_HUMAN 26S protease regulatory subunit 6A - Homo sapiens (Human)|
          Length = 439

 Score = 43.9 bits (102), Expect = 0.002
 Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 8/182 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYD 885
            + +V+ ++     K+ +  +G    +G L+YGPPGTGK+ +  A A      FL      
Sbjct: 196  QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 255

Query: 886  LELTAVKNNTEL-RKLFIETTGK--SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXX 1056
            L    + +  +L R  F     K  SII I+++D                          
Sbjct: 256  LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA----------------------IGT 293

Query: 1057 XXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKH 1236
                         + T+  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ 
Sbjct: 294  KRFDSEKAGDREVQRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRK 351

Query: 1237 IE 1242
            IE
Sbjct: 352  IE 353

---

>O42586:PR6AB_XENLA 26S protease regulatory subunit 6A-B - Xenopus laevis (African clawed|
            frog)
          Length = 404

 Score = 43.9 bits (102), Expect = 0.002
 Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 8/182 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYD 885
            + +V+ ++     K+ +  +G    +G L+YGPPGTGK+ +  A A      FL      
Sbjct: 161  QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 220

Query: 886  LELTAVKNNTEL-RKLFIETTGK--SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXX 1056
            L    + +  +L R  F     K  SII I+++D                          
Sbjct: 221  LVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDA----------------------IGN 258

Query: 1057 XXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKH 1236
                         + T+  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ 
Sbjct: 259  KRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVK--VIAATNRVDILDPALLRSGRLDRK 316

Query: 1237 IE 1242
            IE
Sbjct: 317  IE 318

---

>Q5RDX4:ATAD2_PONPY ATPase family AAA domain-containing protein 2 - Pongo pygmaeus|
            (Orangutan)
          Length = 1091

 Score = 43.9 bits (102), Expect = 0.002
 Identities = 48/176 (27%), Positives = 68/176 (38%), Gaps = 13/176 (7%)
 Frame = +1

Query: 796  RGYLLYGPPGTGKSTMIAAM-----------AYFLDYDVYDLELTAVKNNTELRKLFIET 942
            RG L YGPPGTGK+ +  A+           A+F+      L     ++  +LR LF + 
Sbjct: 292  RGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA 351

Query: 943  --TGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGL 1116
                 SII  ++ID    +                                     +S L
Sbjct: 352  YQMRPSIIFFDEIDGLAPVRSSRQDQIH-------------------------SSIVSTL 386

Query: 1117 LNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEGFKVLAK 1284
            L  +DGL S   GE ++I  TN  + +DPAL R GR D+    S    E  K + K
Sbjct: 387  LALMDGLDSR--GEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILK 440

---

>O74894:PRS6B_SCHPO 26S protease regulatory subunit 6B homolog - Schizosaccharomyces|
            pombe (Fission yeast)
          Length = 389

 Score = 43.5 bits (101), Expect = 0.003
 Identities = 45/168 (26%), Positives = 66/168 (39%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAM-----AYFLDYDVYDLELTAVKNNTEL-R 924
            D Y ++G    RG LLYGPPGTGK+ ++ A+     A F+     +     +     + R
Sbjct: 158  DLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVR 217

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F        +II I++ID                                       +
Sbjct: 218  DVFRMARENAPAIIFIDEIDAIAT----------------------KRFDAQTGADREVQ 255

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
              L  LL  +DG     G    +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 256  RILIELLTQMDGFDQ--GANVKVIMATNRADTLDPALLRPGRLDRKIE 301

---

>O42587:PR6AA_XENLA 26S protease regulatory subunit 6A-A - Xenopus laevis (African clawed|
            frog)
          Length = 405

 Score = 43.5 bits (101), Expect = 0.003
 Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 8/182 (4%)
 Frame = +1

Query: 721  EAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAA-----MAYFLDYDVYD 885
            + +V+ ++     K+ +  +G    +G L+YGPPGTGK+ +  A      A FL      
Sbjct: 180  QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 239

Query: 886  LELTAVKNNTEL-RKLFIETTGK--SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXX 1056
            L    + +  +L R  F     K  SII I+++D                          
Sbjct: 240  LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA----------------------IGT 277

Query: 1057 XXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKH 1236
                         + T+  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ 
Sbjct: 278  KRFDSEKAGDREVQRTMLELLNQLDGFQP--NMQVKVIAATNRVDILDPALLRSGRLDRK 335

Query: 1237 IE 1242
            IE
Sbjct: 336  IE 337

---

>O64982:PRS7_PRUPE 26S protease regulatory subunit 7 - Prunus persica (Peach)|
          Length = 425

 Score = 43.1 bits (100), Expect = 0.004
 Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
 Frame = +1

Query: 715  EKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYD 885
            EK   V EL      K  + K+G    +G L YGPPGTGK+ +  A+A   D     V  
Sbjct: 177  EKMREVVELPMLHPEK--FVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIG 234

Query: 886  LELTAV---KNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXX 1050
             EL      +    +R+LF     K   I+  +++D                        
Sbjct: 235  SELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA----------------------I 272

Query: 1051 XXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMD 1230
                           + T+  ++N +DG + A G  ++++  TN  + LDPAL+R GR+D
Sbjct: 273  GGARFDDGVGGDNEVQRTMLEIVNQLDG-FDARGNIKVLM-ATNRPDTLDPALLRPGRLD 330

Query: 1231 KHIE 1242
            + +E
Sbjct: 331  RKVE 334

---

>Q5R8D7:PRS7_PONPY 26S protease regulatory subunit 7 - Pongo pygmaeus (Orangutan)|
          Length = 433

 Score = 43.1 bits (100), Expect = 0.004
 Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 8/174 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELRKL 930
            +  +G    +G LL+GPPGTGK+    A+A   D     V   EL      +    +R+L
Sbjct: 201  FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 260

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F    T    +I  ++ID                                       + T
Sbjct: 261  FEMARTKKACLIFFDEIDA----------------------IGGARFDDGAGGDNEVQRT 298

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG 1266
            +  L+N +DG      G   ++  TN  + LDPAL+R GR+D+ IE S    EG
Sbjct: 299  MLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350

---

>Q9SSB5:PRS7_ARATH 26S protease regulatory subunit 7 - Arabidopsis thaliana (Mouse-ear|
            cress)
          Length = 426

 Score = 43.1 bits (100), Expect = 0.004
 Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
 Frame = +1

Query: 715  EKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYD 885
            EK   V EL      K  + K+G    +G L YGPPGTGK+ +  A+A   D     V  
Sbjct: 178  EKMREVVELPMLHPEK--FVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIG 235

Query: 886  LELTAV---KNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXX 1050
             EL      +    +R+LF     K   I+  +++D                        
Sbjct: 236  SELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA----------------------I 273

Query: 1051 XXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMD 1230
                           + T+  ++N +DG + A G  ++++  TN  + LDPAL+R GR+D
Sbjct: 274  GGARFDDGVGGDNEVQRTMLEIVNQLDG-FDARGNIKVLM-ATNRPDTLDPALLRPGRLD 331

Query: 1231 KHIE 1242
            + +E
Sbjct: 332  RKVE 335

---

>Q9C1E9:PEX6_GLOLA Peroxisomal biogenesis factor 6 - Glomerella lagenarium (Anthracnose|
            fungus) (Colletotrichum lagenarium)
          Length = 1388

 Score = 43.1 bits (100), Expect = 0.004
 Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 2/185 (1%)
 Frame = +1

Query: 685  TFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYF 864
            T+D +    + K+AV + +    E  + +AK G   + G L YGPPGTGK+ +  A+A  
Sbjct: 992  TWDDVGGLNNVKDAVTETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIA-- 1048

Query: 865  LDYDVYDLELTAVKNNTELRKLFIETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXX 1044
                 Y L   +VK   EL  ++I   G+S   +  +                       
Sbjct: 1049 ---TEYSLNFFSVK-GPELLNMYI---GESEANVRRV------FQRARDARPCVVFFDEL 1095

Query: 1045 XXXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSA--CGGERIIIFTTNHKEKLDPALIRR 1218
                                +S LL  +DG+       G   +I  TN  + LDPAL+R 
Sbjct: 1096 DSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRP 1155

Query: 1219 GRMDK 1233
            GR DK
Sbjct: 1156 GRFDK 1160

---

>P54811:TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1 - Caenorhabditis|
            elegans
          Length = 809

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKL 930
            +  +G    RG LL+GPPGTGK+ +  A+A      +FL      +   + ++ + LRK 
Sbjct: 236  FKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKA 295

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F   E    +I+ I++ID                                       +  
Sbjct: 296  FEECEKNQPAILFIDEIDA-------------------------IAPKREKTNGEVERRI 330

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEM----SYCRFEGFK 1272
            +S LL  +DG+        ++I  TN    +D AL R GR D+ I++    +  R E  +
Sbjct: 331  VSQLLTLMDGVKGR--SNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR 388

Query: 1273 VLAKN 1287
            +  KN
Sbjct: 389  IHTKN 393



 Score = 35.0 bits (79), Expect = 1.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +1

Query: 754 ESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           E  + Y K G    RG L YGPPG GK+ +  A+A
Sbjct: 504 EHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 538

---

>Q18787:PRS7_CAEEL Probable 26S protease regulatory subunit 7 - Caenorhabditis elegans|
          Length = 435

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 8/168 (4%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELRKL 930
            Y  +G    +G LLYGPPGTGK+    A+A   D     V   EL      +    +R+L
Sbjct: 203  YVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 262

Query: 931  F--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F    T    +I  ++ID                                       + T
Sbjct: 263  FEMARTKKACLIFFDEIDA----------------------VGGARFDDGQGGDNEVQRT 300

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMS 1248
            +  L+N +DG      G   ++  TN  + LDPAL+R GR+D+ +E +
Sbjct: 301  MLELINQLDGFDPR--GNIKVLMATNRPDTLDPALMRPGRLDRKVEFA 346

---

>P54778:PRS6B_SOLTU 26S protease regulatory subunit 6B homolog - Solanum tuberosum|
            (Potato)
          Length = 413

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAM------AYFLDYDVYDLELTAVKNNTELR 924
            + Y ++G    RG LLYGPPGTGK+ +  A+      A+        ++    +    +R
Sbjct: 184  ELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 243

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F   +    +II I+++D                                       +
Sbjct: 244  DVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE----------------------VQ 281

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
              L  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 282  RILMELLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLDRKIE 327

---

>Q9SEI4:PRS6B_ARATH 26S protease regulatory subunit 6B homolog - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 408

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAM------AYFLDYDVYDLELTAVKNNTELR 924
            + Y ++G    RG LLYGPPGTGK+ +  A+      A+        ++    +    +R
Sbjct: 179  ELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVR 238

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F   +    +II I+++D                                       +
Sbjct: 239  DVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE----------------------VQ 276

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
              L  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 277  RILMELLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLDRKIE 322

---

>Q8CDM1:ATAD2_MOUSE ATPase family AAA domain-containing protein 2 - Mus musculus (Mouse)|
          Length = 1040

 Score = 42.4 bits (98), Expect = 0.007
 Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 13/164 (7%)
 Frame = +1

Query: 796  RGYLLYGPPGTGKSTMIAAM-----------AYFLDYDVYDLELTAVKNNTELRKLFIET 942
            RG L YGPPGTGK+ +  A+           A+F+      L     ++  +LR LF + 
Sbjct: 116  RGCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA 175

Query: 943  --TGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGL 1116
                 +II  ++ID    +                                     +S L
Sbjct: 176  YQMRPAIIFFDEIDGLAPVRSSRQDQIH-------------------------SSIVSTL 210

Query: 1117 LNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMS 1248
            L  +DGL S   GE ++I  TN  + +DPAL R GR D+    S
Sbjct: 211  LALMDGLDSR--GEIVVIGATNRLDSIDPALRRPGRFDREFLFS 252

---

>P46502:PRS6B_CAEEL Probable 26S protease regulatory subunit 6B - Caenorhabditis elegans|
          Length = 414

 Score = 42.0 bits (97), Expect = 0.009
 Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELR 924
            + Y ++G    RG L+YGPPG GK+ +  A+A      +        ++    +    +R
Sbjct: 185  ELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVR 244

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F   +    SII I++ID                                       +
Sbjct: 245  DVFRLAKENSPSIIFIDEIDAIAT----------------------KRFDAQTGADREVQ 282

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
              L  LLN +DG   +   +  +I  TN ++ LDPAL+R GR+D+ IE
Sbjct: 283  RILLELLNQMDGFDQSTNVK--VIMATNRQDTLDPALLRPGRLDRKIE 328

---

>Q9ULI0:ATD2B_HUMAN ATPase family AAA domain-containing protein 2B - Homo sapiens (Human)|
          Length = 1458

 Score = 42.0 bits (97), Expect = 0.009
 Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 13/159 (8%)
 Frame = +1

Query: 796  RGYLLYGPPGTGKSTMIAAM-----------AYFLDYDVYDLELTAVKNNTELRKLFIET 942
            RG L YGPPGTGK+ +  A+           A+F+      L     ++  +LR LF + 
Sbjct: 435  RGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQA 494

Query: 943  --TGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGL 1116
                 SII  ++ID    +                                     +S L
Sbjct: 495  YLMRPSIIFFDEIDGLAPVRSSRQDQIH-------------------------SSIVSTL 529

Query: 1117 LNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDK 1233
            L  +DGL +   GE ++I  TN  + +DPAL R GR D+
Sbjct: 530  LALMDGLDNR--GEIVVIGATNRLDSIDPALRRPGRFDR 566

---

>Q975D4:RFCL_SULTO Replication factor C large subunit - Sulfolobus tokodaii|
          Length = 440

 Score = 41.6 bits (96), Expect = 0.012
 Identities = 22/84 (26%), Positives = 44/84 (52%)
 Frame = +1

Query: 679 PATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           P T + +    D K+ +V+ + ++ + K  Y  V        LLYGPPG GK+T+  A+A
Sbjct: 11  PKTLNEVENEEDAKKELVEWIESWLKGKPNYKAV--------LLYGPPGVGKTTLAEALA 62

Query: 859 YFLDYDVYDLELTAVKNNTELRKL 930
                +++++  +  +N  ++R +
Sbjct: 63  RDYKLELFEMNASDSRNLNDIRTM 86

---

>P36612:PRS4_SCHPO 26S protease regulatory subunit 4 homolog - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 448

 Score = 41.6 bits (96), Expect = 0.012
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 8/167 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL-R 924
            + Y ++G    +G +LYG PGTGK+ +  A+A      FL     +L    + +   L R
Sbjct: 215  ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVR 274

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   E    SI+ I++ID                                       +
Sbjct: 275  QLFNAAEEHSPSIVFIDEIDA----------------------IGTKRYDAQSGAEREIQ 312

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
             T+  LLN +DG  ++    ++I+  TN    LDPALIR GR+D+ I
Sbjct: 313  RTMLELLNQLDGFDTSQRDIKVIM-ATNRISDLDPALIRPGRIDRKI 358

---

>Q9HNP9:PSMR1_HALSA Proteasome-activating nucleotidase 1 - Halobacterium salinarium|
            (Halobacterium halobium)
          Length = 411

 Score = 41.2 bits (95), Expect = 0.015
 Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
 Frame = +1

Query: 718  KEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELT 897
            +EAV D L+    + + +  VG     G LL+GPPGTGK+ +  A+A   D     +  +
Sbjct: 165  REAVEDPLV----NPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGS 220

Query: 898  AV------KNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXX 1053
             +      + +  +R LF   E    +II I++ID                         
Sbjct: 221  ELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDA----------------------VA 258

Query: 1054 XXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDK 1233
                          + T+  LL+ +DG      G+  II  TN  + LD A++R GR D+
Sbjct: 259  AKRTDSKTSGDAEVQRTMMQLLSEMDGFDER--GDIRIIAATNRFDMLDSAILRPGRFDR 316

Query: 1234 HIEM 1245
             IE+
Sbjct: 317  LIEV 320

---

>O42931:PRS7_SCHPO 26S protease regulatory subunit 7 homolog - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 438

 Score = 41.2 bits (95), Expect = 0.015
 Identities = 46/178 (25%), Positives = 68/178 (38%), Gaps = 8/178 (4%)
 Frame = +1

Query: 757  SKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELT---AVKNNTE 918
            S + + K+G    +G +LYGPPGTGK+    A+A   D     V   EL      +    
Sbjct: 201  SPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 260

Query: 919  LRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 1092
            +R+LF    T    II  ++ID                                      
Sbjct: 261  VRELFEMARTKKACIIFFDEIDA----------------------IGGARFDDGAGGDNE 298

Query: 1093 TKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG 1266
             + T+  L+  +DG      G   ++F TN    LD AL+R GR+D+ +E      EG
Sbjct: 299  VQRTMLELITQLDGFDPR--GNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEG 354

---

>P46507:PRS6B_MANSE 26S protease regulatory subunit 6B - Manduca sexta (Tobacco hawkmoth)|
            (Tobacco hornworm)
          Length = 415

 Score = 40.8 bits (94), Expect = 0.020
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELR 924
            + Y ++G    RG L+YGPPG GK+ +  A+A+        V   E       +    +R
Sbjct: 186  ELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 245

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F   +    +II I++ID                                       +
Sbjct: 246  DVFRLAKENSPAIIFIDEIDAIAT----------------------KRFDAQTGADREVQ 283

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
              L  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 284  RILLELLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLDRKIE 329

---

>Q9UVU5:PEX6_PICAN Peroxisomal biogenesis factor 6 - Pichia angusta (Yeast) (Hansenula|
            polymorpha)
          Length = 1135

 Score = 40.8 bits (94), Expect = 0.020
 Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 9/181 (4%)
 Frame = +1

Query: 718  KEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYD---- 885
            K+ ++D +    +  + ++K G   + G L YGPPGTGK+ +  A+A     + +     
Sbjct: 822  KDEILDTIEMPLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKAIATNFALNFFSVKGP 880

Query: 886  --LELTAVKNNTELRKLFIETTGKS--IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXX 1053
              L +   ++   +R++F +       +I  +++D                         
Sbjct: 881  ELLNMYIGESEANVRRVFQKARDAKPCVIFFDELD-----------------------SV 917

Query: 1054 XXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERI-IIFTTNHKEKLDPALIRRGRMD 1230
                             +S LL  +DG+  A GG+ + ++  TN  + LD AL+R GR D
Sbjct: 918  APKRGNQGDSGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFD 977

Query: 1231 K 1233
            K
Sbjct: 978  K 978

---

>Q9SS94:CD48C_ARATH Cell division control protein 48 homolog C - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 820

 Score = 40.8 bits (94), Expect = 0.020
 Identities = 42/176 (23%), Positives = 67/176 (38%), Gaps = 16/176 (9%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELRKL 930
            + K+G     G L +GPPG GK+ +  A+A       Y +  T V       +   +R+L
Sbjct: 259  FKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIREL 318

Query: 931  FIET--TGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            F +   T  SI+ I++ID                                       K  
Sbjct: 319  FSKAYRTAPSIVFIDEIDA-------------------------IGSKRENQQREMEKRI 353

Query: 1105 LSGLLNFIDGLWS--------ACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMS 1248
            ++ LL  +DG  +        +  G  ++I  TN  + LDPAL R GR +  I ++
Sbjct: 354  VTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALT 409



 Score = 33.5 bits (75), Expect = 3.1
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 763 DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           D Y   G   + G+LLYGPPG GK+ +  A A
Sbjct: 552 DIYKAFGVDLETGFLLYGPPGCGKTLIAKAAA 583

---

>Q8TZC5:RFCL_METKA Replication factor C large subunit - Methanopyrus kandleri|
          Length = 510

 Score = 40.4 bits (93), Expect = 0.026
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
 Frame = +1

Query: 736 ELMAFQESKDYYAKVGKAWKRG-------YLLYGPPGTGKSTMIAAMAYFLDYDVYDLEL 894
           EL+   E+K   A     W RG        LL+GPPGTGK++   A+A+   +DV +L  
Sbjct: 15  ELVNQDEAKKELAAWANEWARGSIPEPRAVLLHGPPGTGKTSAAYALAHDFGWDVIELNA 74

Query: 895 TAVKNNTELRKL 930
           +  +    + K+
Sbjct: 75  SDKRTRNVIEKI 86

---

>Q9YBS5:RFCL_AERPE Replication factor C large subunit - Aeropyrum pernix|
          Length = 479

 Score = 40.4 bits (93), Expect = 0.026
 Identities = 22/97 (22%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
 Frame = +1

Query: 730 VDELMAFQESKDYYAKVGKAW-------KRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL 888
           V++++   ++K       KAW       KR  LLYGPPG GK++++ A+A   + ++ +L
Sbjct: 21  VEDVVNQDQAKKILVPWFKAWLEGRKPDKRAALLYGPPGVGKTSLVEAIASEFNLEMIEL 80

Query: 889 ELTAVKNNTELRKLFIETTGKS-------IIVIEDID 978
             +  +  +++ ++    + K        +I+++++D
Sbjct: 81  NASDYRRRSDIERIVGAASRKRSMFKRGVVILLDEVD 117

---

>Q5JHS5:PSMR_PYRKO Proteasome-activating nucleotidase - Pyrococcus kodakaraensis|
            (Thermococcus kodakaraensis)
          Length = 397

 Score = 40.4 bits (93), Expect = 0.026
 Identities = 47/176 (26%), Positives = 69/176 (39%), Gaps = 8/176 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAM-----AYFLDYDVYDLELTAVKNNTEL-R 924
            + + +VG    +G LLYGPPG GK+ M  A+     A F+     +L    +     L  
Sbjct: 162  ELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVH 221

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
            +LF   +    +II I++ID                                        
Sbjct: 222  ELFELAKEKAPTIIFIDEIDA----------------------IGAKRMDETTGGEREVN 259

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG 1266
             TL  LL  +DG      G   +I  TN  + LDPAL+R GR D+ IE+    ++G
Sbjct: 260  RTLMQLLAEMDGFDPR--GNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQG 313

---

>P40340:TBP7_YEAST TAT-binding homolog 7 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 1379

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 43/159 (27%), Positives = 62/159 (38%), Gaps = 13/159 (8%)
 Frame = +1

Query: 796  RGYLLYGPPGTGKSTMIAAMA-----------YFLDYDVYDLELTAVKNNTELRKLFIET 942
            RG L +GPPGTGK+ M  A+A           +F+      L     +   +LR LF E 
Sbjct: 448  RGVLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEA 507

Query: 943  T--GKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGL 1116
                 SII  ++ID    +                                     +S L
Sbjct: 508  KKHQPSIIFFDEIDGLAPVRSSKQEQIHAS-------------------------IVSTL 542

Query: 1117 LNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDK 1233
            L  +DG+ +   G+ I+I  TN  + +DPAL R GR D+
Sbjct: 543  LALMDGMDNR--GQVIVIGATNRPDAVDPALRRPGRFDR 579

---

>A1RWU6:RFCL_THEPD Replication factor C large subunit - Thermofilum pendens (strain|
           Hrk 5)
          Length = 413

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 25/102 (24%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
 Frame = +1

Query: 718 KEAVVDELMAFQESKDYYAKVGKAW------KRGYLLYGPPGTGKSTMIAAMAYFLDYDV 879
           + A + +++  +E+K  Y     +W      K+  LLYGPPG+GK++++ A A    +++
Sbjct: 16  RPARIADVVGNEEAKKKYVAWINSWVKGKPSKKAALLYGPPGSGKTSIVHATAKEFSWEL 75

Query: 880 YDLELTAVKNNTELRKLFIET---------TGKSIIVIEDID 978
            +L  + V+    L++  +           +GK II+++++D
Sbjct: 76  IELNASDVRTREALQQRLLGALNTRSVLGYSGK-IILLDEVD 116

---

>Q8PY58:PSMR_METMA Proteasome-activating nucleotidase - Methanosarcina mazei|
            (Methanosarcina frisia)
          Length = 420

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
 Frame = +1

Query: 757  SKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTEL 921
            S + +A++G    +G LLYG PGTGK+ +  A+A+     F+     +L    + + ++L
Sbjct: 181  SPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKL 240

Query: 922  RKLFIETTGK---SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 1092
             +   E   K   SII I+++D                                      
Sbjct: 241  VREIFEMARKKAPSIIFIDELD----------------------SIAARRLNETTGADRE 278

Query: 1093 TKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDK--HIEM 1245
             + TL  LL  +DG          II  TN  + LDPA++R GR D+  H+ M
Sbjct: 279  VQRTLMQLLAEMDGFDKRKNIR--IIAATNRPDVLDPAILRPGRFDRLVHVPM 329

---

>Q63570:PRS6B_RAT 26S protease regulatory subunit 6B - Rattus norvegicus (Rat)|
          Length = 418

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELR 924
            + Y ++G    RG L+YGPPG GK+ +  A+A+        V   E       +    +R
Sbjct: 189  ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F   +    +II I++ID                                       +
Sbjct: 249  DVFRLAKENAPAIIFIDEIDAIAT----------------------KRFDAQTGADREVQ 286

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
              L  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 287  RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIE 332

---

>P54775:PRS6B_MOUSE 26S protease regulatory subunit 6B - Mus musculus (Mouse)|
          Length = 418

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELR 924
            + Y ++G    RG L+YGPPG GK+ +  A+A+        V   E       +    +R
Sbjct: 189  ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F   +    +II I++ID                                       +
Sbjct: 249  DVFRLAKENAPAIIFIDEIDAIAT----------------------KRFDAQTGADREVQ 286

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
              L  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 287  RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIE 332

---

>Q4R7L3:PRS6B_MACFA 26S protease regulatory subunit 6B - Macaca fascicularis (Crab eating|
            macaque) (Cynomolgus monkey)
          Length = 418

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELR 924
            + Y ++G    RG L+YGPPG GK+ +  A+A+        V   E       +    +R
Sbjct: 189  ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F   +    +II I++ID                                       +
Sbjct: 249  DVFRLAKENAPAIIFIDEIDAIAT----------------------KRFDAQTGADREVQ 286

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
              L  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 287  RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIE 332

---

>P43686:PRS6B_HUMAN 26S protease regulatory subunit 6B - Homo sapiens (Human)|
          Length = 418

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELR 924
            + Y ++G    RG L+YGPPG GK+ +  A+A+        V   E       +    +R
Sbjct: 189  ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F   +    +II I++ID                                       +
Sbjct: 249  DVFRLAKENAPAIIFIDEIDAIAT----------------------KRFDAQTGADREVQ 286

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
              L  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 287  RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIE 332

---

>Q3T030:PRS6B_BOVIN 26S protease regulatory subunit 6B - Bos taurus (Bovine)|
          Length = 418

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 8/168 (4%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD---YDVYDLELTAV---KNNTELR 924
            + Y ++G    RG L+YGPPG GK+ +  A+A+        V   E       +    +R
Sbjct: 189  ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248

Query: 925  KLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             +F   +    +II I++ID                                       +
Sbjct: 249  DVFRLAKENAPAIIFIDEIDAIAT----------------------KRFDAQTGADREVQ 286

Query: 1099 VTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIE 1242
              L  LLN +DG       +  +I  TN  + LDPAL+R GR+D+ IE
Sbjct: 287  RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIE 332

---

>Q94392:NSF_CAEEL Vesicle-fusing ATPase - Caenorhabditis elegans|
          Length = 824

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 17/179 (9%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLD-------YDVYDLELTAVKNNTEL 921
            ++  ++G    RG LL+GPPGTGK+ M   +   L+            L+    ++ + +
Sbjct: 320  EFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESNV 379

Query: 922  RKLFIE----------TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXX 1071
            RKLF +           +G  II+ ++ID                               
Sbjct: 380  RKLFADAEEEWRRCGANSGLHIIIFDEIDA-----------------------ICKQRGS 416

Query: 1072 XXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMS 1248
                       ++ LL+ +DG+        ++I  TN ++ +D AL+R GR++  +E+S
Sbjct: 417  MAGSSSVHDTVVNQLLSKMDGVEQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEVS 473

---

>Q07844:RIX7_YEAST Ribosome biogenesis ATPase RIX7 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 837

 Score = 39.7 bits (91), Expect = 0.044
 Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 2/161 (1%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIET 942
            + Y KVG +   G LL+GPPG GK+ +  A+A                   E R  FI  
Sbjct: 557  ELYEKVGISAPGGVLLWGPPGCGKTLLAKAVA------------------NESRANFISI 598

Query: 943  TGKSII--VIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGL 1116
             G  ++   + + + S+                                  +++V ++ L
Sbjct: 599  KGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRV-VNTL 657

Query: 1117 LNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
            L  +DGL    G    +I  TN  + +DPA++R GR+DK +
Sbjct: 658  LTELDGLNDRRG--IFVIGATNRPDMIDPAMLRPGRLDKSL 696



 Score = 35.4 bits (80), Expect = 0.83
 Identities = 40/169 (23%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
 Frame = +1

Query: 763  DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV------KNNTELR 924
            + +   G    RG LL+GPPG GK+++  A+A  L      +   +V      ++  ++R
Sbjct: 229  EIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIR 288

Query: 925  KLFIE--TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK 1098
             LF E  +    ++  ++ID                                       +
Sbjct: 289  DLFDEARSLAPCLVFFDEIDA------------------------ITPKRDGGAQREMER 324

Query: 1099 VTLSGLLNFIDGLW--SACGGERIIIFTTNHKEKLDPALIRRGRMDKHI 1239
              ++ LL  +D L      G   III  TN  + LD AL R GR D+ I
Sbjct: 325  RIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREI 373

---

>Q9HG03:PEX6_PENCH Peroxisomal biogenesis factor 6 - Penicillium chrysogenum|
            (Penicillium notatum)
          Length = 1459

 Score = 39.3 bits (90), Expect = 0.057
 Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 13/185 (7%)
 Frame = +1

Query: 718  KEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYD---- 885
            K+A+V+ +    E  + +AK G   + G L YGPPGTGK+ +  A+A     + +     
Sbjct: 1039 KDALVETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGP 1097

Query: 886  --LELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXX 1053
              L +   ++   +R++F         ++  +++D                         
Sbjct: 1098 ELLNMYIGESEANVRRVFQRARDARPCVVFFDELD-----------------------SV 1134

Query: 1054 XXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGER-----IIIFTTNHKEKLDPALIRR 1218
                             +S LL  +DG+    GGE       +I  TN  + LD AL+R 
Sbjct: 1135 APKRGNQGDSGGVMDRIVSQLLAELDGM---NGGEENSGGVFVIGATNRPDLLDTALLRP 1191

Query: 1219 GRMDK 1233
            GR DK
Sbjct: 1192 GRFDK 1196

---

>Q8JZQ2:AFG32_MOUSE AFG3-like protein 2 - Mus musculus (Mouse)|
          Length = 802

 Score = 39.3 bits (90), Expect = 0.057
 Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 8/184 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            +E +  + E + F ++   Y  +G    +G +L GPPGTGK+ +  A A      +    
Sbjct: 313  EEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVS 372

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                LE+        +R LF         I+ I++ID                       
Sbjct: 373  GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA---------------------- 410

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG  +      +I+  TN  + LDPAL+R GR 
Sbjct: 411  VGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT--NVVILAGTNRPDILDPALLRPGRF 468

Query: 1228 DKHI 1239
            D+ I
Sbjct: 469  DRQI 472

---

>Q9Y4W6:AFG32_HUMAN AFG3-like protein 2 - Homo sapiens (Human)|
          Length = 797

 Score = 39.3 bits (90), Expect = 0.057
 Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 8/184 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            +E +  + E + F ++   Y  +G    +G +L GPPGTGK+ +  A A      +    
Sbjct: 314  EEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVS 373

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                LE+        +R LF         I+ I++ID                       
Sbjct: 374  GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA---------------------- 411

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG  +      +I+  TN  + LDPAL+R GR 
Sbjct: 412  VGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT--NVVILAGTNRPDILDPALLRPGRF 469

Query: 1228 DKHI 1239
            D+ I
Sbjct: 470  DRQI 473

---

>Q6M0E9:RFCL_METMP Replication factor C large subunit - Methanococcus maripaludis|
          Length = 486

 Score = 38.9 bits (89), Expect = 0.075
 Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
 Frame = +1

Query: 679 PATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           P + + +A H   K+A+++ + +          +G   ++  LL GPPG+GK+T+  A+A
Sbjct: 10  PKSLNDVAGHNKTKQALIEWIESI---------IGGQNQKPILLAGPPGSGKTTLAYAIA 60

Query: 859 YFLDYDVYDLELTAVKNNTELRKLF-IETTGKS------IIVIEDID 978
               +DV +L  +  +N   + ++     T KS      +IV++++D
Sbjct: 61  NDYAFDVIELNASDKRNKDVISQVVGTAATSKSLTGRRTLIVLDEVD 107

---

>Q8TI88:PSMR_METAC Proteasome-activating nucleotidase - Methanosarcina acetivorans|
          Length = 421

 Score = 38.9 bits (89), Expect = 0.075
 Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
 Frame = +1

Query: 769  YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAY-----FLDYDVYDLELTAVKNNTELRKLF 933
            +A++G    +G LLYG PGTGK+ +  A+A+     F+     +L    + + ++L +  
Sbjct: 185  FARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREI 244

Query: 934  IETTGK---SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
             E   K   SII I+++D                                       + T
Sbjct: 245  FEMARKKAPSIIFIDELD----------------------SIAARRLNETTGADREVQRT 282

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDK--HIEM 1245
            L  LL  +DG          II  TN  + LDPA++R GR D+  H+ M
Sbjct: 283  LMQLLAEMDGFDKRKNIR--IIAATNRPDVLDPAILRPGRFDRLVHVPM 329

---

>P54351:NSF2_DROME Vesicular-fusion protein Nsf2 - Drosophila melanogaster (Fruit fly)|
          Length = 752

 Score = 38.9 bits (89), Expect = 0.075
 Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 17/174 (9%)
 Frame = +1

Query: 796  RGYLLYGPPGTGKS-------TMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIE----- 939
            +G LLYGPPGTGK+       TM+ A    +      L+    ++   +R+LF E     
Sbjct: 259  KGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEE 318

Query: 940  -----TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
                  +G  II+ ++ID                                          
Sbjct: 319  KRLGPNSGLHIIIFDEIDA-----------------------ICKARGSVAGNSGVHDTV 355

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG 1266
            ++ LL  IDG+        ++I  TN ++ +D AL+R GR++  +E+S    +G
Sbjct: 356  VNQLLAKIDGVEQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQG 407

---

>P46461:NSF1_DROME Vesicular-fusion protein Nsf1 - Drosophila melanogaster (Fruit fly)|
          Length = 745

 Score = 38.9 bits (89), Expect = 0.075
 Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 17/174 (9%)
 Frame = +1

Query: 796  RGYLLYGPPGTGKS-------TMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIE----- 939
            +G LLYGPPGTGK+       TM+ A    +      L+    ++   +R+LF E     
Sbjct: 254  KGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEE 313

Query: 940  -----TTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
                  +G  II+ ++ID                                          
Sbjct: 314  KRLGPNSGLHIIIFDEIDA-----------------------ICKQRGSVAGNSGVHDTV 350

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEG 1266
            ++ LL  IDG+        ++I  TN ++ +D AL+R GR++  +E+S    +G
Sbjct: 351  VNQLLTKIDGVDQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQG 402

---

>Q2KJI7:AFG32_BOVIN AFG3-like protein 2 - Bos taurus (Bovine)|
          Length = 805

 Score = 38.9 bits (89), Expect = 0.075
 Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 8/184 (4%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA------YFLDY 873
            +E +  + E + F ++   Y  +G    +G +L GPPGTGK+ +  A A      +    
Sbjct: 315  EEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVS 374

Query: 874  DVYDLELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
                LE+        +R LF         I+ I++ID                       
Sbjct: 375  GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA---------------------- 412

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ LL  +DG  +      +I+  TN  + LDPAL+R GR 
Sbjct: 413  VGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT--NVVILAGTNRPDILDPALMRPGRF 470

Query: 1228 DKHI 1239
            D+ I
Sbjct: 471  DRQI 474

---

>Q09803:VPS4_SCHPO Suppressor protein of bem1/bed5 double mutants -|
           Schizosaccharomyces pombe (Fission yeast)
          Length = 432

 Score = 38.5 bits (88), Expect = 0.098
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
 Frame = +1

Query: 688 FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA--- 858
           +D +A   + KEA+ + ++   +    ++   K W  G LLYGPPGTGKS +  A+A   
Sbjct: 128 WDDIAGLENAKEALKETVLLPIKLPQLFSHGRKPWS-GILLYGPPGTGKSYLAKAVATEA 186

Query: 859 --YFLDYDVYDLELTAVKNNTELRKLFIETTGK---SIIVIEDID 978
              F      DL    +  +  L +   E   +   SII I++ID
Sbjct: 187 GSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEID 231

---

>O13764:PEX6_SCHPO Peroxisomal biogenesis factor 6 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 948

 Score = 38.5 bits (88), Expect = 0.098
 Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 8/168 (4%)
 Frame = +1

Query: 793  KRGYLLYGPPGTGKSTMIAAMAYFLDYDVYD------LELTAVKNNTELRKLFIETTGKS 954
            + G LLYGPPGTGK+ +  A+A  L  +         L +   ++   +R +F +    S
Sbjct: 688  RSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSS 747

Query: 955  --IIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFI 1128
              +I  +++D                                          +S LL  +
Sbjct: 748  PCVIFFDELD-----------------------SIAPHRGNSSDSGNVMDRVVSQLLAEL 784

Query: 1129 DGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEGFK 1272
            D +         +I  TN  + LDP+L+R GR DK + +   + E  K
Sbjct: 785  DSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESK 832

---

>Q9P7Q4:SEC18_SCHPO Vesicular-fusion protein SEC18 homolog - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 792

 Score = 38.1 bits (87), Expect = 0.13
 Identities = 41/175 (23%), Positives = 68/175 (38%), Gaps = 17/175 (9%)
 Frame = +1

Query: 775  KVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYD-------LELTAVKNNTELRKLF 933
            K+G    +G LLYGPPGTGK+ +   +   L+            L     ++   +RKLF
Sbjct: 298  KLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLF 357

Query: 934  I----------ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1083
                       E +G  II+ +++D                                   
Sbjct: 358  ADAEREYRDRGEESGLHIIIFDELDA-----------------------ICKKRGSSGGD 394

Query: 1084 XXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMS 1248
                   ++ LL  +DG+        ++I  TN K+ +D AL+R GR++ H+E+S
Sbjct: 395  TGVGDQVVNQLLAKMDGVDQL--NNILVIGMTNRKDMIDEALLRPGRLEVHMEIS 447

---

>Q8ZYK3:RFCL_PYRAE Replication factor C large subunit - Pyrobaculum aerophilum|
          Length = 422

 Score = 38.1 bits (87), Expect = 0.13
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
 Frame = +1

Query: 679 PATFDTLAMHPDEKEAVVDEL-MAFQESKDYYAKVGK------AWKRGYLLYGPPGTGKS 837
           P +F  +    + K  +   + + F+  K++  +  K      A  +  LL GPPG GK+
Sbjct: 11  PKSFAEIVNQEEAKYTLASWICLKFRAPKEFCTRWAKKRDKEVAEAKAILLAGPPGVGKT 70

Query: 838 TMIAAMAYFLDYDVYDLELTAVKNNTELRKL 930
           T++ A+A  + Y++ +L  + V+    LR++
Sbjct: 71  TLVHALAREIRYELIELNASDVRTADRLRQV 101

---

>Q0W3P4:RFCL_UNCMA Replication factor C large subunit - Uncultured methanogenic|
           archaeon RC-I
          Length = 553

 Score = 37.7 bits (86), Expect = 0.17
 Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
 Frame = +1

Query: 793 KRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKL---------FIETT 945
           K+  +LYG PG GK++   A+A+ + +D  +L  + V+    + ++         F  T 
Sbjct: 43  KKAVILYGGPGVGKTSAALALAHDMGWDYIELNASDVRTKDAINRIAGPAAMAGTFEGTG 102

Query: 946 GKSIIVIEDID 978
           G+ ++++++ D
Sbjct: 103 GRRLVILDEAD 113

---

>A1RSA3:RFCL_PYRIL Replication factor C large subunit - Pyrobaculum islandicum (strain|
           DSM 4184 / JCM 9189)
          Length = 423

 Score = 37.7 bits (86), Expect = 0.17
 Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
 Frame = +1

Query: 679 PATFDTLAMHPDEKEAVVDELMA-FQESKDYYAKVGK------AWKRGYLLYGPPGTGKS 837
           P TF+ +    + K  +   + A F+  +++  +  K         +  LL GPPG GK+
Sbjct: 11  PKTFEEIVNQEEAKYTLASWICAKFKAPREFCTRWAKKKDKEIVEAKAVLLAGPPGIGKT 70

Query: 838 TMIAAMAYFLDYDVYDLELTAVKNNTELRKL 930
           T++ A+A  + Y++ +L  + V+    ++++
Sbjct: 71  TIVHALAREIKYELIELNASDVRTGERIKQV 101

---

>P38630:RFC1_YEAST Replication factor C subunit 1 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 861

 Score = 37.7 bits (86), Expect = 0.17
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = +1

Query: 751 QESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTEL 921
           + S  +  K G    R  +LYGPPG GK+T    +A  L YD+ +   + V++ T L
Sbjct: 332 KNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLL 388

---

>Q920A7:AFG31_MOUSE AFG3-like protein 1 - Mus musculus (Mouse)|
          Length = 663

 Score = 37.7 bits (86), Expect = 0.17
 Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 8/202 (3%)
 Frame = +1

Query: 712  DEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA-----YFLDYD 876
            +E +  + E + F ++   Y  +G    +G +L GPPGTGK+ +  A A      F+  +
Sbjct: 180  EEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVN 239

Query: 877  VYD-LELTAVKNNTELRKLF--IETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXX 1047
              + LE+        +R +F         I+ I++ID                       
Sbjct: 240  GSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDA---------------------- 277

Query: 1048 XXXXXXXXXXXXXXATKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRM 1227
                            + TL+ +L  +DG  S+     +++  TN  + LDPAL R GR 
Sbjct: 278  IGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSST--NVVVLAGTNRPDILDPALTRPGRF 335

Query: 1228 DKHIEMSYCRFEGFKVLAKNYL 1293
            D+ I +     +G   + K +L
Sbjct: 336  DRQIYIGPPDIKGRSSIFKVHL 357

---

>Q8DGR1:RUVB_SYNEL Holliday junction ATP-dependent DNA helicase ruvB - Synechococcus|
           elongatus (Thermosynechococcus elongatus)
          Length = 363

 Score = 37.4 bits (85), Expect = 0.22
 Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
 Frame = +1

Query: 616 ASRNSNPYRSN--SVWSHVPF---EHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKV 780
           +S+NS P RS   SV S+ P    +H    D+L  H  +      EL          AK 
Sbjct: 6   SSQNSPPERSRPPSVLSNQPTPEEQHSLAEDSLRPHSLQDYIGQQELKEVLHIAIQAAKA 65

Query: 781 GKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGKSII 960
            +      LLYGPPG GK+T+   +A  +  +       A++   ++  L +      I+
Sbjct: 66  RQEPLDHLLLYGPPGLGKTTIALILAAEMGVNCKVTSAPALERPRDIVGLLVNLQAGDIL 125

Query: 961 VIEDI 975
            I++I
Sbjct: 126 FIDEI 130

---

>Q58294:RFCL_METJA Replication factor C large subunit - Methanococcus jannaschii|
          Length = 516

 Score = 37.0 bits (84), Expect = 0.28
 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
 Frame = +1

Query: 805 LLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGKS-------IIV 963
           LL GPPG GK+T+  A+A    ++V +L  +  +N++ ++K+       S       +IV
Sbjct: 43  LLVGPPGCGKTTLAYALANDYGFEVIELNASDKRNSSAIKKVVGHAATSSSIFGKKFLIV 102

Query: 964 IEDID 978
           ++++D
Sbjct: 103 LDEVD 107

---

>O43933:PEX1_HUMAN Peroxisome biogenesis factor 1 - Homo sapiens (Human)|
          Length = 1283

 Score = 37.0 bits (84), Expect = 0.28
 Identities = 50/230 (21%), Positives = 87/230 (37%), Gaps = 4/230 (1%)
 Frame = +1

Query: 577  TVKNRQRRLFTN----NASRNSNPYRSNSVWSHVPFEHPATFDTLAMHPDEKEAVVDELM 744
            ++  R++ + T      A R   P    SV  H P +    +D +    + ++ ++D + 
Sbjct: 800  SISTREKLVLTTLDFQKALRGFLPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQ 857

Query: 745  AFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELR 924
               +  + +A +    + G LLYGPPGTGK+ +   +A         +   +VK    L 
Sbjct: 858  LPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIA-----RESRMNFISVKGPELLS 912

Query: 925  KLFIETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVT 1104
            K      G S   + DI                                       T   
Sbjct: 913  KYI----GASEQAVRDIFIRAQAA--------KPCILFFDEFESIAPRRGHDNTGVTDRV 960

Query: 1105 LSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYC 1254
            ++ LL  +DG+    G    ++  T+  + +DPAL+R GR+DK +   YC
Sbjct: 961  VNQLLTQLDGVEGLQG--VYVLAATSRPDLIDPALLRPGRLDKCV---YC 1005

---

>O29072:RFCL_ARCFU Replication factor C large subunit - Archaeoglobus fulgidus|
          Length = 479

 Score = 36.6 bits (83), Expect = 0.37
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +1

Query: 730 VDELMAFQESKDYYAKVGKAWKRG---YLLYGPPGTGKSTMIAAMAYFLDYDVYDL 888
           ++E++A +       K  K+WKRG    LL GPPG GK+++  A+A  + ++  +L
Sbjct: 12  LEEVVADKSIITRVIKWAKSWKRGSKPLLLAGPPGVGKTSLALALANTMGWEAVEL 67

---

>P33760:PEX6_YEAST Peroxisomal biogenesis factor 6 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 1030

 Score = 36.6 bits (83), Expect = 0.37
 Identities = 38/159 (23%), Positives = 59/159 (37%), Gaps = 8/159 (5%)
 Frame = +1

Query: 781  GKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYD------LELTAVKNNTELRKLF--I 936
            G   + G L YGPPGTGK+ M  A+A     + +       L +   ++   +R++F   
Sbjct: 761  GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKA 820

Query: 937  ETTGKSIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGL 1116
                  +I  ++ID                                          +S L
Sbjct: 821  REAKPCVIFFDEID-----------------------SVAPKRGNQGDSGGVMDRIVSQL 857

Query: 1117 LNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDK 1233
            L  +DG+ +   G   +I  TN  + LD AL+R GR DK
Sbjct: 858  LAELDGMSTDADGV-FVIGATNRPDLLDEALLRPGRFDK 895

---

>P46509:Y1316_MYCLE Uncharacterized AAA-family ATPase ML1316 - Mycobacterium leprae|
          Length = 609

 Score = 36.2 bits (82), Expect = 0.49
 Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 7/185 (3%)
 Frame = +1

Query: 760  KDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIE 939
            K+ Y +      +G LLYGPPG GK+ +  A+A  L   + ++     +   E +  F+ 
Sbjct: 275  KELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAR---EAKSYFLN 331

Query: 940  TTGKSII--VIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK----V 1101
              G  ++   + + +  + L                                 +      
Sbjct: 332  IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETT 391

Query: 1102 TLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGRMDKHIEMSYCRFEGFKVL 1278
             +  LL+ IDG+    G E +I+   +N ++ +DPA++R GR+D  I++     E  + +
Sbjct: 392  VVPQLLSEIDGVE---GLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDI 448

Query: 1279 AKNYL 1293
               YL
Sbjct: 449  YSKYL 453

---

>Q9HLX6:LONH2_THEAC Putative protease La homolog type 2 - Thermoplasma acidophilum|
          Length = 493

 Score = 36.2 bits (82), Expect = 0.49
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +1

Query: 772 AKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGK 951
           A V    +R  LL GPPG GKS +  AM++++D      E+  V N     + F+E   +
Sbjct: 38  AMVAAKQRRHLLLVGPPGVGKSMIAQAMSFYIDRPTE--EIRVVHNPQYPERPFVEIKTR 95

Query: 952 SIIVIE 969
             ++ E
Sbjct: 96  EEVMAE 101

---

>Q67Q97:RUVB_SYMTH Holliday junction ATP-dependent DNA helicase ruvB - Symbiobacterium|
           thermophilum
          Length = 347

 Score = 35.8 bits (81), Expect = 0.63
 Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 15/105 (14%)
 Frame = +1

Query: 706 HPDEKEAVVDELMAFQESKDYYAK----------VGKAWKRG-----YLLYGPPGTGKST 840
           H   ++A ++E +  Q   DY  +          +  A KRG      LLYGPPG GK+T
Sbjct: 10  HRRPEDARIEETLRPQRLADYPGQERVKEQLSIYIAAAKKRGEPLDHVLLYGPPGLGKTT 69

Query: 841 MIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGKSIIVIEDI 975
           +   +A+ +  ++      A+ +  +L  +  + +   ++ +++I
Sbjct: 70  LAHIIAHEMGVNLRITSGPAISHQGDLAAILTQLSEGDVLFVDEI 114

---

>Q65GP6:RUVB_BACLD Holliday junction DNA helicase ruvB - Bacillus licheniformis|
           (strain DSM 13 / ATCC 14580)
          Length = 334

 Score = 35.8 bits (81), Expect = 0.63
 Identities = 24/86 (27%), Positives = 42/86 (48%)
 Frame = +1

Query: 718 KEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELT 897
           +E V D L  F E+    AK+ +      LLYGPPG GK+T+ A +A  +  ++      
Sbjct: 32  QEKVKDNLKVFIEA----AKMREETLDHVLLYGPPGLGKTTLAAIIANEMGVNLRTTSGP 87

Query: 898 AVKNNTELRKLFIETTGKSIIVIEDI 975
           A++   +L  +        ++ I++I
Sbjct: 88  AIERPGDLAAILTALEPGDVLFIDEI 113

---

>Q8ZWS2:RFCS2_PYRAE Replication factor C small subunit 2 - Pyrobaculum aerophilum|
          Length = 319

 Score = 35.8 bits (81), Expect = 0.63
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +1

Query: 733 DELMAFQESKDYYAKVGKAWKRGYLL-YGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKN 909
           DE++  +E K    +  KA    +LL YGPPGTGK+TM   +A  L Y  Y  E T   N
Sbjct: 16  DEVVDLEEVKARLRQFVKAGNMPHLLFYGPPGTGKTTMALVLAREL-YGEYWRENTLELN 74

Query: 910 NTELR 924
            ++ R
Sbjct: 75  ASDER 79

---

>Q8ZYK4:RFCS1_PYRAE Replication factor C small subunit 1 - Pyrobaculum aerophilum|
          Length = 329

 Score = 35.8 bits (81), Expect = 0.63
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +1

Query: 733 DELMAFQESKDYYAKVGKAWKRGYLL-YGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKN 909
           DE++  +E K    +  KA    +LL YGPPGTGK+TM   +A  L Y  Y  E T   N
Sbjct: 16  DEVVDLEEVKARLREFVKAGNMPHLLFYGPPGTGKTTMALVLAREL-YGEYWRENTLELN 74

Query: 910 NTELR 924
            ++ R
Sbjct: 75  ASDER 79

---

>Q503W7:ATD1B_DANRE ATPase family AAA domain-containing protein 1-B - Danio rerio|
            (Zebrafish) (Brachydanio rerio)
          Length = 362

 Score = 35.8 bits (81), Expect = 0.63
 Identities = 49/202 (24%), Positives = 80/202 (39%), Gaps = 9/202 (4%)
 Frame = +1

Query: 796  RGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNN--TELRKLFIETTG------K 951
            +G LLYGPPG GK+ +  A A    +   +L+ + + +    E +KL             
Sbjct: 131  KGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQP 190

Query: 952  SIIVIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKVTLSGLLNFID 1131
            SII I++ID  +                                  AT +  +  ++  D
Sbjct: 191  SIIFIDEIDSFL-------------------------RNRSSSDHEATAMMKAQFMSLWD 225

Query: 1132 GLWSACGGERIIIFTTNHKEKLDPALIRRGRMDKHIEMSYCRFEGFKVLAKNYLDVIEHE 1311
            GL +    + II+  TN  + LD A++RR     HI     R    K + K  L+    E
Sbjct: 226  GLDTDYNCQVIIMGATNRPQDLDSAILRRMPTRFHINQPNVRQR--KDILKLILENENVE 283

Query: 1312 LFGEIQQLLDETD-MSPADVAE 1374
               E+ ++  +TD  S +D+ E
Sbjct: 284  SAVELSEIAKQTDGFSGSDLRE 305

---

>P63346:Y2139_MYCBO Uncharacterized AAA-family ATPase Mb2139c - Mycobacterium bovis|
          Length = 609

 Score = 35.4 bits (80), Expect = 0.83
 Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 7/185 (3%)
 Frame = +1

Query: 760  KDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIE 939
            K+ Y +      +G LLYGPPG GK+ +  A+A  L   + ++      +  E +  F+ 
Sbjct: 275  KELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVR---GDDAHEAKSYFLN 331

Query: 940  TTGKSII--VIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK----V 1101
              G  ++   + + +  + L                                 +      
Sbjct: 332  IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETT 391

Query: 1102 TLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGRMDKHIEMSYCRFEGFKVL 1278
             +  LL+ IDG+    G E +I+   +N ++ +DPA++R GR+D  I++     E  + +
Sbjct: 392  VVPQLLSEIDGVE---GLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDI 448

Query: 1279 AKNYL 1293
               YL
Sbjct: 449  YSKYL 453

---

>P63345:Y2115_MYCTU Uncharacterized AAA-family ATPase Rv2115c/MT2175 - Mycobacterium|
            tuberculosis
          Length = 609

 Score = 35.4 bits (80), Expect = 0.83
 Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 7/185 (3%)
 Frame = +1

Query: 760  KDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIE 939
            K+ Y +      +G LLYGPPG GK+ +  A+A  L   + ++      +  E +  F+ 
Sbjct: 275  KELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVR---GDDAHEAKSYFLN 331

Query: 940  TTGKSII--VIEDIDCSVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATK----V 1101
              G  ++   + + +  + L                                 +      
Sbjct: 332  IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETT 391

Query: 1102 TLSGLLNFIDGLWSACGGERIIIF-TTNHKEKLDPALIRRGRMDKHIEMSYCRFEGFKVL 1278
             +  LL+ IDG+    G E +I+   +N ++ +DPA++R GR+D  I++     E  + +
Sbjct: 392  VVPQLLSEIDGVE---GLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDI 448

Query: 1279 AKNYL 1293
               YL
Sbjct: 449  YSKYL 453

---

>A1RV38:RFCS2_PYRIL Replication factor C small subunit 2 - Pyrobaculum islandicum|
           (strain DSM 4184 / JCM 9189)
          Length = 320

 Score = 35.4 bits (80), Expect = 0.83
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +1

Query: 733 DELMAFQESKDYYAKVGKAWKRGYLL-YGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKN 909
           DE++  +E K    +  K+    +LL YGPPGTGK+TM   +A  L Y  Y  E T   N
Sbjct: 16  DEVVDLEEVKSRLREFVKSGNMPHLLFYGPPGTGKTTMALVLAREL-YGEYWRENTLELN 74

Query: 910 NTELR 924
            ++ R
Sbjct: 75  ASDER 79

---

>A1RSA2:RFCS1_PYRIL Replication factor C small subunit 1 - Pyrobaculum islandicum|
           (strain DSM 4184 / JCM 9189)
          Length = 329

 Score = 35.4 bits (80), Expect = 0.83
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +1

Query: 733 DELMAFQESKDYYAKVGKAWKRGYLL-YGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKN 909
           DE++  +E K    +  K+    +LL YGPPGTGK+TM   +A  L Y  Y  E T   N
Sbjct: 16  DEVVDLEEVKSRLREFVKSGNMPHLLFYGPPGTGKTTMALVLAREL-YGEYWRENTLELN 74

Query: 910 NTELR 924
            ++ R
Sbjct: 75  ASDER 79

---

>Q3ISA5:RFCL_NATPD Replication factor C large subunit - Natronomonas pharaonis (strain|
           DSM 2160 / ATCC 35678)
          Length = 483

 Score = 35.4 bits (80), Expect = 0.83
 Identities = 18/97 (18%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
 Frame = +1

Query: 718 KEAVVDELMAFQESKDYYAKVGKAW---KRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL 888
           +   + E+    +++D + +  KAW   +   +L+G PG GK++   A+A  + + V ++
Sbjct: 9   RPTTLSEVRGNNKARDAFEEWAKAWEDHREAVILHGSPGVGKTSAAHALANDMGWPVLEM 68

Query: 889 ELTAVKNNTELRKLFIETT-------GKSIIVIEDID 978
             +  +   E+ +             G+ +I++++ D
Sbjct: 69  NASDARTKDEIERFAGRAASNATLGGGRQLIILDEAD 105

---

>A0B6D7:RFCL_METTP Replication factor C large subunit - Methanosaeta thermophila|
           (strain DSM 6194 / PT) (Methanothrix thermophila (strain
           DSM 6194 / PT))
          Length = 467

 Score = 35.4 bits (80), Expect = 0.83
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
 Frame = +1

Query: 787 AWKRG------YLLYGPPGTGKSTMIAAMAYFLDYDVYDL 888
           AW++G       +LYGPPG GK++   A+A  +D+D  +L
Sbjct: 32  AWEKGRPEVKCLILYGPPGVGKTSAALALASEMDWDYIEL 71

---

>P38629:RFC3_YEAST Replication factor C subunit 3 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 340

 Score = 35.4 bits (80), Expect = 0.83
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 15/73 (20%)
 Frame = +1

Query: 805 LLYGPPGTGKSTMIAAMA---YFLDYDVYDLELTA------------VKNNTELRKLFIE 939
           L YGPPGTGK++ I A+A   Y  +Y    LEL A            +K+    R++F  
Sbjct: 50  LFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIF-- 107

Query: 940 TTGKSIIVIEDID 978
           + G  +I++++ D
Sbjct: 108 SKGFKLIILDEAD 120

---

>O74111:RFC3_ARXAD Replication factor C subunit 3 - Arxula adeninivorans (Yeast)|
          Length = 338

 Score = 35.4 bits (80), Expect = 0.83
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
 Frame = +1

Query: 679 PATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           P T D +A H    E V+  +  F E        GK      L +GPPGTGK+T I A+A
Sbjct: 25  PTTLDEVAGH----EGVITTIKKFVEE-------GKL--PHLLFHGPPGTGKTTTIIAVA 71

Query: 859 ---YFLDYDVYDLELTA------------VKNNTELRKLFIETTGKSIIVIEDID 978
              Y  +Y    LEL A            +K     R++F  ++G  ++++++ D
Sbjct: 72  RQIYGKNYRNMILELNASDERGIDVVRDQIKTFASTRQIF--SSGFKLVILDEAD 124

---

>O61577:KTNA1_STRPU Katanin p60 ATPase-containing subunit - Strongylocentrotus|
           purpuratus (Purple sea urchin)
          Length = 516

 Score = 35.4 bits (80), Expect = 0.83
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +1

Query: 763 DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           DY+  + + WK G L+ GPPGTGK+ +  A+A
Sbjct: 258 DYFKGIRRPWK-GVLMVGPPGTGKTMLAKAVA 288

---

>Q9SEX2:KTNA1_ARATH Katanin p60 ATPase-containing subunit - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 523

 Score = 35.4 bits (80), Expect = 0.83
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +1

Query: 763 DYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           +Y+  + + WK G L++GPPGTGK+ +  A+A
Sbjct: 263 EYFQGIRRPWK-GVLMFGPPGTGKTLLAKAVA 293

---

>Q9PQX0:Y173_UREPA Uncharacterized protein UU173 - Ureaplasma parvum (Ureaplasma|
           urealyticum biotype 1)
          Length = 690

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 18/68 (26%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = +1

Query: 775 KVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAV-KNNTELRKLFIETTGK 951
           K+ +  +  Y++Y    + +++ +  MA F++ ++Y+L+++ + KN  +L   FI + GK
Sbjct: 528 KIHQGLEYSYIVYNK--SFEASRLKEMAEFINEEIYELKVSEIIKNMYDLADFFIVSMGK 585

Query: 952 SIIVIEDI 975
            +IVI ++
Sbjct: 586 QLIVIPEL 593

---

>Q5WHR5:RUVB_BACSK Holliday junction ATP-dependent DNA helicase ruvB - Bacillus|
           clausii (strain KSM-K16)
          Length = 333

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 23/86 (26%), Positives = 42/86 (48%)
 Frame = +1

Query: 718 KEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELT 897
           +E V   L  F E+    AK+ +      LLYGPPG GK+T+ A +A  +  ++      
Sbjct: 32  QETVKHNLAVFMEA----AKMREEALDHVLLYGPPGLGKTTLAAIIAAEMGGELRTTSGP 87

Query: 898 AVKNNTELRKLFIETTGKSIIVIEDI 975
           A++ + +L  +        ++ I++I
Sbjct: 88  AIERSGDLAAILTALEPGDVLFIDEI 113

---

>Q4JAB1:RFCL_SULAC Replication factor C large subunit - Sulfolobus acidocaldarius|
          Length = 437

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +1

Query: 781 GKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTA 900
           G+   +  LLYGPPG GK+T+  A+A   DY +  LE+ A
Sbjct: 37  GEPTAKAVLLYGPPGVGKTTLAEALA--RDYKLELLEMNA 74

---

>O57853:RFCL_PYRHO Replication factor C large subunit - Pyrococcus horikoshii|
          Length = 468

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 14/32 (43%), Positives = 24/32 (75%)
 Frame = +1

Query: 793 KRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDL 888
           K+  LL GPPG+GK+T + A+A+  +++V +L
Sbjct: 43  KKALLLAGPPGSGKTTTVYALAHEYNFEVIEL 74

---

>Q6L0P4:RFCL_PICTO Replication factor C large subunit - Picrophilus torridus|
          Length = 410

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 15/59 (25%), Positives = 35/59 (59%)
 Frame = +1

Query: 793 KRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGKSIIVIE 969
           K+  +LYG PGTGK+T    +A +L+  + ++  +  +N   ++++ + ++  S ++ E
Sbjct: 39  KKSLILYGDPGTGKTTTATVIANYLNVPLIEMNASDERNADSMKRVALMSSLYSDLLSE 97

---

>Q12TX1:RFCL_METBU Replication factor C large subunit - Methanococcoides burtonii|
           (strain DSM 6242)
          Length = 497

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
 Frame = +1

Query: 781 GKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLE---------LTAVKNNTELRKLF 933
           G   KR  +L+GP G GK++   A+A  LD++  +L          +  V  +       
Sbjct: 39  GTPEKRAIILHGPAGVGKTSAAHALARDLDWETIELNASDQRTAGVIERVAGSASKMSSL 98

Query: 934 IETTGKSIIVIEDID 978
             TT K +I++++ D
Sbjct: 99  TGTTAKRLIILDEAD 113

---

>Q8VEJ9:VPS4A_MOUSE Vacuolar protein sorting-associating protein 4A - Mus musculus|
           (Mouse)
          Length = 437

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
 Frame = +1

Query: 796 RGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGK-- 951
           RG LL+GPPGTGKS +  A+A       F      DL    +  + +L K   E   +  
Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHK 220

Query: 952 -SIIVIEDID 978
            SII I+++D
Sbjct: 221 PSIIFIDEVD 230

---

>Q9UN37:VPS4A_HUMAN Vacuolar protein sorting-associating protein 4A - Homo sapiens|
           (Human)
          Length = 437

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
 Frame = +1

Query: 796 RGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGK-- 951
           RG LL+GPPGTGKS +  A+A       F      DL    +  + +L K   E   +  
Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHK 220

Query: 952 -SIIVIEDID 978
            SII I+++D
Sbjct: 221 PSIIFIDEVD 230

---

>Q5XHZ9:TRP13_RAT Thyroid receptor-interacting protein 13 - Rattus norvegicus (Rat)|
          Length = 432

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +1

Query: 649 SVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGK-AWKRGYLLYGPPG 825
           S W     E    +D+L    + K  ++D +M      D         W R  LL+GPPG
Sbjct: 123 SHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGPPG 182

Query: 826 TGKSTMIAAMA 858
           TGK+++  A+A
Sbjct: 183 TGKTSLCKALA 193

---

>Q3UA06:TRP13_MOUSE Thyroid receptor-interacting protein 13 - Mus musculus (Mouse)|
          Length = 432

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +1

Query: 649 SVWSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGK-AWKRGYLLYGPPG 825
           S W     E    +D+L    + K  ++D +M      D         W R  LL+GPPG
Sbjct: 123 SHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTVLFSDKNVDSNLITWNRVVLLHGPPG 182

Query: 826 TGKSTMIAAMA 858
           TGK+++  A+A
Sbjct: 183 TGKTSLCKALA 193

---

>Q15645:TRP13_HUMAN Thyroid receptor-interacting protein 13 - Homo sapiens (Human)|
          Length = 432

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +1

Query: 655 WSHVPFEHPATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGK-AWKRGYLLYGPPGTG 831
           W     E    +D+L    + K  ++D +M      D         W R  LL+GPPGTG
Sbjct: 125 WVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVNSNLITWNRVVLLHGPPGTG 184

Query: 832 KSTMIAAMA 858
           K+++  A+A
Sbjct: 185 KTSLCKALA 193

---

>A2SQR6:RFCL_METLZ Replication factor C large subunit - Methanocorpusculum labreanum|
           (strain ATCC 43576 / DSM 4855 / Z)
          Length = 476

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
 Frame = +1

Query: 769 YAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETT- 945
           +AK      R  L  G PG GK++   A+A  +D++V +L  +  +  T + ++   ++ 
Sbjct: 28  WAKTWTPDSRPLLFTGKPGIGKTSAALALARDMDWEVLELNASDARTKTIIERVAGNSST 87

Query: 946 -------GKSIIVIEDID 978
                  G+ +I+I+++D
Sbjct: 88  TTSLFGAGRKLIIIDEVD 105

---

>P35251:RFC1_HUMAN Replication factor C subunit 1 - Homo sapiens (Human)|
          Length = 1148

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
 Frame = +1

Query: 754 ESKDYYAKVGK-------AWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNN 912
           E K + AK GK       +  +  LL GPPG GK+T  + +   L Y   +L  +  ++ 
Sbjct: 624 EDKKHAAKFGKFSGKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSK 683

Query: 913 TELRKLFIETTGKSII 960
           + L+ +  E+   + I
Sbjct: 684 SSLKAIVAESLNNTSI 699

---

>Q9NU22:MDN1_HUMAN Midasin - Homo sapiens (Human)|
          Length = 5596

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
 Frame = +1

Query: 583  KNRQRRLFTNNASRNSNPYRSNSVWSHVPFEHPATFDTLAM-----HPDEKEAVVDELMA 747
            K +   +F +    NSNPY    ++   P++    +  L+      HP     ++    +
Sbjct: 1987 KKKVIAVFKDVFGSNSNPYMGTRLFRITPYDVQLGYSVLSRGSCVPHPSRHPLLLLH-QS 2045

Query: 748  FQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTEL 921
            FQ  +     V  +W    +L GP   GK++++  +A+   + +  + + +  + TEL
Sbjct: 2046 FQPLESIMKCVQMSWM--VILVGPASVGKTSLVQLLAHLTGHTLKIMAMNSAMDTTEL 2101

---

>Q5XIK7:KATL1_RAT Katanin p60 ATPase-containing subunit A-like 1 - Rattus norvegicus|
           (Rat)
          Length = 488

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 17/57 (29%), Positives = 33/57 (57%)
 Frame = +1

Query: 688 FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           +D +A   + K+ + + ++      D++  + + WK G L+ GPPGTGK+ +  A+A
Sbjct: 205 WDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWK-GVLMVGPPGTGKTMLAKAVA 260

---

>Q8K0T4:KATL1_MOUSE Katanin p60 ATPase-containing subunit A-like 1 - Mus musculus|
           (Mouse)
          Length = 488

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 17/57 (29%), Positives = 33/57 (57%)
 Frame = +1

Query: 688 FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           +D +A   + K+ + + ++      D++  + + WK G L+ GPPGTGK+ +  A+A
Sbjct: 205 WDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWK-GVLMVGPPGTGKTMLAKAVA 260

---

>Q9BW62:KATL1_HUMAN Katanin p60 ATPase-containing subunit A-like 1 - Homo sapiens|
           (Human)
          Length = 490

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 17/57 (29%), Positives = 33/57 (57%)
 Frame = +1

Query: 688 FDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           +D +A   + K+ + + ++      D++  + + WK G L+ GPPGTGK+ +  A+A
Sbjct: 207 WDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWK-GVLMVGPPGTGKTMLAKAVA 262

---

>Q3B0J1:RUVB_SYNS9 Holliday junction ATP-dependent DNA helicase ruvB - Synechococcus|
           sp. (strain CC9902)
          Length = 347

 Score = 34.3 bits (77), Expect = 1.8
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +1

Query: 805 LLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGKSIIVIEDI 975
           LLYGPPG GK+TM   +A  L  +       A++   ++  L +    + ++ I++I
Sbjct: 73  LLYGPPGLGKTTMALVLAEELGVNCRITSAPALERPRDIVGLLVNLQPRDLLFIDEI 129

---

>Q4A9R6:RUVB_MYCHJ Holliday junction ATP-dependent DNA helicase ruvB - Mycoplasma|
           hyopneumoniae (strain J / ATCC 25934 / NCTC 10110)
          Length = 318

 Score = 34.3 bits (77), Expect = 1.8
 Identities = 16/57 (28%), Positives = 33/57 (57%)
 Frame = +1

Query: 805 LLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGKSIIVIEDI 975
           L YGPPGTGK+T+   +A  L+  +  ++   ++  +++  +    +  +II I++I
Sbjct: 43  LFYGPPGTGKTTLANIVANVLEAKIKYVQGPLLEKKSDVLAVLANISPDTIIFIDEI 99

---

>Q4A7W4:RUVB_MYCH7 Holliday junction ATP-dependent DNA helicase ruvB - Mycoplasma|
           hyopneumoniae (strain 7448)
          Length = 318

 Score = 34.3 bits (77), Expect = 1.8
 Identities = 16/57 (28%), Positives = 33/57 (57%)
 Frame = +1

Query: 805 LLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGKSIIVIEDI 975
           L YGPPGTGK+T+   +A  L+  +  ++   ++  +++  +    +  +II I++I
Sbjct: 43  LFYGPPGTGKTTLANIVANVLEAKIKYVQGPLLEKKSDVLAVLANISPDTIIFIDEI 99

---

>Q600N3:RUVB_MYCH2 Holliday junction ATP-dependent DNA helicase ruvB - Mycoplasma|
           hyopneumoniae (strain 232)
          Length = 318

 Score = 34.3 bits (77), Expect = 1.8
 Identities = 16/57 (28%), Positives = 33/57 (57%)
 Frame = +1

Query: 805 LLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGKSIIVIEDI 975
           L YGPPGTGK+T+   +A  L+  +  ++   ++  +++  +    +  +II I++I
Sbjct: 43  LFYGPPGTGKTTLANIVANVLEAKIKYVQGPLLEKKSDVLAVLANISPDTIIFIDEI 99

---

>Q839T5:RUVB_ENTFA Holliday junction ATP-dependent DNA helicase ruvB - Enterococcus|
           faecalis (Streptococcus faecalis)
          Length = 338

 Score = 34.3 bits (77), Expect = 1.8
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +1

Query: 805 LLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNNTELRKLFIETTGKSIIVIEDI 975
           LLYGPPG GK+TM   +A  ++ ++      A++   +L  +  E     ++ I++I
Sbjct: 59  LLYGPPGLGKTTMAMVIANEMNVNIRTTSGPAIERAGDLVAILNELEPGDVLFIDEI 115

---

>Q9HIP7:RFCL_THEAC Replication factor C large subunit - Thermoplasma acidophilum|
          Length = 418

 Score = 34.3 bits (77), Expect = 1.8
 Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
 Frame = +1

Query: 679 PATFDTLAMHPDEKEAVVDELMAFQESKDYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMA 858
           P   D + ++ + ++ + + + +++E        G   KR  +LYG  GTGK+T   A+A
Sbjct: 10  PKNIDDVILNSEIRKQITEWIESWKE--------GIPKKRSLILYGSQGTGKTTTAYAIA 61

Query: 859 YFLDYDVYDLELTAVKNNTELR----------KLFIETTGK--SIIVIEDID 978
                 V ++  +  +N   +R           LF+E+  +   +I+I++ D
Sbjct: 62  GTFGVPVVEMNASDQRNRDSMRGTALMASLYGDLFVESAKRPSKVILIDEAD 113

---

>P35601:RFC1_MOUSE Replication factor C subunit 1 - Mus musculus (Mouse)|
          Length = 1131

 Score = 34.3 bits (77), Expect = 1.8
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
 Frame = +1

Query: 754 ESKDYYAKVGKAWKR-------GYLLYGPPGTGKSTMIAAMAYFLDYDVYDLELTAVKNN 912
           E K + AK GK   +         LL GPPG GK+T  + +   L Y   +L  +  ++ 
Sbjct: 608 EEKKHAAKFGKLASKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSK 667

Query: 913 TELRKLFIETTGKSII 960
             L+ +  E+   + I
Sbjct: 668 NSLKAVVAESLNNTSI 683

---

>P46467:VPS4B_MOUSE Vacuolar protein sorting-associating protein 4B - Mus musculus|
           (Mouse)
          Length = 444

 Score = 33.9 bits (76), Expect = 2.4
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
 Frame = +1

Query: 796 RGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGK-- 951
           RG LL+GPPGTGKS +  A+A       F      DL    +  + +L K   +   +  
Sbjct: 168 RGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENK 227

Query: 952 -SIIVIEDID 978
            SII I++ID
Sbjct: 228 PSIIFIDEID 237

---

>O75351:VPS4B_HUMAN Vacuolar protein sorting-associating protein 4B - Homo sapiens|
           (Human)
          Length = 444

 Score = 33.9 bits (76), Expect = 2.4
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
 Frame = +1

Query: 796 RGYLLYGPPGTGKSTMIAAMA------YFLDYDVYDLELTAVKNNTELRKLFIETTGK-- 951
           RG LL+GPPGTGKS +  A+A       F      DL    +  + +L K   +   +  
Sbjct: 168 RGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENK 227

Query: 952 -SIIVIEDID 978
            SII I++ID
Sbjct: 228 PSIIFIDEID 237


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 236,255,376
Number of extensions: 4656549
Number of successful extensions: 22223
Number of sequences better than 10.0: 341
Number of HSP's gapped: 22024
Number of HSP's successfully gapped: 448
Length of query: 624
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 505
Effective length of database: 68,045,334
Effective search space: 34362893670
Effective search space used: 34362893670
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---