ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf62o14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AF093630:Os10g0465800 86 1e-17
2AY037871: 30 1.2
3AK103175:Os10g0500600 29 1.5
4AK119834:Os08g0561800 29 2.0
5Os09g0309300:Os09g0309300 28 4.4
6Os06g0544100:Os06g0544100 28 4.4
7AK107442:Os02g0707500 28 4.4
8AK073981:Os03g0225500 28 4.4
9AK119828: 27 7.5
10AK110204: 27 7.5
11AK120856:Os07g0645700 27 9.8

>AF093630:Os10g0465800 |
          Length = 164
 Score = 85.9 bits (211), Expect = 1e-17
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = +1

Query: 73  GEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 198
           GEVISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY
Sbjct: 123 GEVISTKRQPQGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164



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>AY037871: |
          Length = 688

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 195 TTLEIVDDIVRDGCDCLNGGALHHEPGLGPCWLPLCADD 79
           T LEI  +    GCDC N G       LGP  L + A++
Sbjct: 517 TLLEITSESHDAGCDCSNSGGAGTRGSLGPFGLLVVAEE 555



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>AK103175:Os10g0500600 |
          Length = 480

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 15/115 (13%)
 Frame = -2

Query: 499 FFLVCTSDAC*HRNNKGNKSLMQSAASQNSLVEQTVALSTKCKYIMKEDENETDHTKSL- 323
           FF++   D   HR  +  KS     AS     EQ+ +     + I+      T H   + 
Sbjct: 270 FFVI---DDAGHRGKRRKKSFSDQEASSEESNEQSSSAHDNSQAIITGSPTGTSHNLQVG 326

Query: 322 MLTTEKFRLHRAK--------------R*LLSSKTFGTSIDTKTGSSFCSGNKRS 200
           +L+T+  R    K              R +L  K   T ++ KTG+  CS    S
Sbjct: 327 LLSTKSMRRELRKQKRLAAEKACDICGRPMLLEKDVATLLNCKTGNLACSSRNSS 381



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>AK119834:Os08g0561800 |
          Length = 184

 Score = 28.9 bits (63), Expect = 2.0
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -3

Query: 165 RDGCDCLNGGALHHEPGLGPCWLPLCADDLTT 70
           R GC  L+GG   H  GL   WLP  A   TT
Sbjct: 135 RGGCWLLSGGWRRHSGGLWRRWLPSVAAATTT 166



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>Os09g0309300:Os09g0309300 |
          Length = 173

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 74  VRSSAQRGSQQGPSPGSWWRAPPLRQS 154
           V S A+ G ++   P S WRAPPL +S
Sbjct: 110 VTSPARPGGRRRRRPRSTWRAPPLPRS 136



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>Os06g0544100:Os06g0544100 |
          Length = 663

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +2

Query: 104 QGPSPGSWWRAPPLRQSHPSRTMSSTISRVV 196
           QG  PG +WRAP LR    S        RVV
Sbjct: 97  QGAIPGGFWRAPSLRHVDVSGNQLGGALRVV 127



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>AK107442:Os02g0707500 |
          Length = 84

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 56  GERRPVVRSSAQRGSQQGPSPGSWWR 133
           GER P V ++  R    G +P  WWR
Sbjct: 1   GERSPRVATAKARAPWSGGAPCGWWR 26



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>AK073981:Os03g0225500 |
          Length = 1290

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -3

Query: 237  RLAQASAQETSALVTTLEIVDDIVRDGCDCLNGGALHHEPGLGPCWLPLCADDLTTGLL 61
            ++  A  QET+ +   LE+ + I R+    +   A  HE G    W  +C D   TGLL
Sbjct: 924  QIVDAKYQETTEVTDNLELKESIFREVTSPILATAKRHE-GYQTLW-QICYDLSDTGLL 980



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>AK119828: |
          Length = 699

 Score = 26.9 bits (58), Expect = 7.5
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 62  RRPVVRSSAQRGSQQGPSPGSWWRAPPLRQSHPSRTMSS 178
           RRP+ R+S    +   PSP S W  P  R +  SRT +S
Sbjct: 633 RRPLRRASPAARASTSPSPPSAW--PCSRSAATSRTCAS 669



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>AK110204: |
          Length = 447

 Score = 26.9 bits (58), Expect = 7.5
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
 Frame = -3

Query: 186 EIVD---DIVR---DGCDCLNGGALHHEPGLG 109
           E+VD   D+VR   +GCDCL G  + H  G G
Sbjct: 111 ELVDQVLDVVRREAEGCDCLQGFQITHSLGGG 142



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>AK120856:Os07g0645700 |
          Length = 848

 Score = 26.6 bits (57), Expect = 9.8
 Identities = 14/58 (24%), Positives = 24/58 (41%)
 Frame = -2

Query: 382 TKCKYIMKEDENETDHTKSLMLTTEKFRLHRAKR*LLSSKTFGTSIDTKTGSSFCSGN 209
           TKC  I    + + DHT + ++T     +   +   +   T  T+IDT   +     N
Sbjct: 191 TKCSTICSSSDTKPDHTVATVVTCATLVVSSMELVAIDGTTGSTNIDTPDSTKAMPAN 248


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,908,922
Number of extensions: 257494
Number of successful extensions: 776
Number of sequences better than 10.0: 11
Number of HSP's gapped: 775
Number of HSP's successfully gapped: 11
Length of query: 168
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 75
Effective length of database: 11,676,042
Effective search space: 875703150
Effective search space used: 875703150
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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