| Clone Name | FLbaf62o14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ245989.1| Zea mays clone 94004 mRNA sequence Length = 751 Score = 383 bits (193), Expect = e-103 Identities = 251/269 (93%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 ||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 440 aaggcgcgtggggaggtcatcagcacgaagaggcagccagcagggcccaagcctgggttc 499 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 |||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 500 atggtggagggcaccaccatcgagacggtcacccccatcccgtacgacgtcgtcaacgat 559 Query: 184 ctcaagggtggttactagagcgcttgtttcctgagcagaagcttgagccag-tcttagta 242 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 560 ctcaagggtggttactagagcgcttgtttcctgagcagaagcttgagccagttcttagta 619 Query: 243 tctatgcttgttccgaatgttttgctactgagtagtcatcgttttgctctgtggagtctg 302 |||||||||||||| ||||||||| ||||||||||| || |||||||| | |||| || Sbjct: 620 tctatgcttgttcccaatgttttggtactgagtagttctctttttgctccgccgagtgtg 679 Query: 303 aacttctctgtggttaacattaaagattt 331 ||||||||||||||||||||||||||||| Sbjct: 680 aacttctctgtggttaacattaaagattt 708
>gb|AF475114.1| Triticum aestivum 60s ribosomal protein L21 mRNA, partial cds Length = 519 Score = 204 bits (103), Expect = 2e-49 Identities = 129/138 (93%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 ||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 382 aaggcgcgtggcgaggtcatcagcacgaagaggcagccagcagggcccaagcctgggttc 441 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 |||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 442 atggtggagggcaccaccatcgagacggtcacccccatcccgtacgacgtcgtcaacgat 501 Query: 184 ctcaagggtggttactag 201 ||||| |||||||||||| Sbjct: 502 ctcaanggtggttactag 519
>ref|NM_001071334.1| Oryza sativa (japonica cultivar-group) Os10g0465800 (Os10g0465800) mRNA, complete cds Length = 717 Score = 125 bits (63), Expect = 2e-25 Identities = 122/139 (87%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccc-aagcccgggtt 122 ||||| |||||||||||||||||||| ||||||||||| |||||| || |||||||| || Sbjct: 362 aaggctcgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcccggctt 420 Query: 123 catggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacga 182 |||||| ||||| | || | ||||| ||||| ||||||||||||||||| ||||| || Sbjct: 421 catggttgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatga 480 Query: 183 tctcaagggtggttactag 201 ||||||||||||||||||| Sbjct: 481 tctcaagggtggttactag 499
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 125 bits (63), Expect = 2e-25 Identities = 122/139 (87%), Gaps = 2/139 (1%) Strand = Plus / Minus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccc-aagcccgggtt 122 ||||| |||||||||||||||||||| ||||||||||| |||||| || |||||||| || Sbjct: 14219 aaggctcgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcccggctt 14161 Query: 123 catggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacga 182 |||||| ||||| | || | ||||| ||||| ||||||||||||||||| ||||| || Sbjct: 14160 catggttgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatga 14101 Query: 183 tctcaagggtggttactag 201 ||||||||||||||||||| Sbjct: 14100 tctcaagggtggttactag 14082
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 125 bits (63), Expect = 2e-25 Identities = 122/139 (87%), Gaps = 2/139 (1%) Strand = Plus / Minus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccc-aagcccgggtt 122 ||||| |||||||||||||||||||| ||||||||||| |||||| || |||||||| || Sbjct: 16669702 aaggctcgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcccggctt 16669644 Query: 123 catggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacga 182 |||||| ||||| | || | ||||| ||||| ||||||||||||||||| ||||| || Sbjct: 16669643 catggttgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatga 16669584 Query: 183 tctcaagggtggttactag 201 ||||||||||||||||||| Sbjct: 16669583 tctcaagggtggttactag 16669565
>emb|CT837723.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA045H17, full insert sequence Length = 402 Score = 117 bits (59), Expect = 4e-23 Identities = 121/139 (87%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccc-aagcccgggtt 122 ||||| |||||||||||||||||||| ||||||||||| |||||| || ||||| || || Sbjct: 132 aaggctcgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcctggctt 190 Query: 123 catggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacga 182 |||||| ||||| | || | ||||| ||||| ||||||||||||||||| ||||| || Sbjct: 191 catggttgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatga 250 Query: 183 tctcaagggtggttactag 201 ||||||||||||||||||| Sbjct: 251 tctcaagggtggttactag 269
>gb|AF093630.1|AF093630 Oryza sativa 60S ribosomal protein L21 (RPL21) mRNA, complete cds Length = 753 Score = 117 bits (59), Expect = 4e-23 Identities = 121/139 (87%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccc-aagcccgggtt 122 ||||| |||||||||||||||||||| ||||||||||| |||||| || ||||| || || Sbjct: 374 aaggctcgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcctggctt 432 Query: 123 catggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacga 182 |||||| ||||| | || | ||||| ||||| ||||||||||||||||| ||||| || Sbjct: 433 catggttgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatga 492 Query: 183 tctcaagggtggttactag 201 ||||||||||||||||||| Sbjct: 493 tctcaagggtggttactag 511
>emb|CT834200.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042O23, full insert sequence Length = 737 Score = 91.7 bits (46), Expect = 2e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 ||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || ||| Sbjct: 434 aaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggtttc 493 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 ||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| ||| Sbjct: 494 atggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaatgat 553 Query: 184 ctcaagggtggttactagagcgcttgtttc 213 ||||||||||||||||||| ||||||||| Sbjct: 554 ctcaagggtggttactagaatgcttgtttc 583 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 ctctgtggttaacattaaagattt 331 |||||||||||||||||||||||| Sbjct: 668 ctctgtggttaacattaaagattt 691
>ref|NM_001055459.1| Oryza sativa (japonica cultivar-group) Os03g0141000 (Os03g0141000) mRNA, complete cds Length = 2004 Score = 91.7 bits (46), Expect = 2e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 ||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || ||| Sbjct: 1498 aaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggtttc 1557 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 ||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| ||| Sbjct: 1558 atggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaatgat 1617 Query: 184 ctcaagggtggttactagagcgcttgtttc 213 ||||||||||||||||||| ||||||||| Sbjct: 1618 ctcaagggtggttactagaatgcttgtttc 1647 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 294 tggagtctgaacttctctgtggttaacattaaagattt 331 |||| ||||||| ||| ||||||||||||||||||||| Sbjct: 1720 tggaatctgaacctctatgtggttaacattaaagattt 1757
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 91.7 bits (46), Expect = 2e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 ||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || ||| Sbjct: 138491 aaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggtttc 138550 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 ||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| ||| Sbjct: 138551 atggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaatgat 138610 Query: 184 ctcaagggtggttactagagcgcttgtttc 213 ||||||||||||||||||| ||||||||| Sbjct: 138611 ctcaagggtggttactagaatgcttgtttc 138640 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 294 tggagtctgaacttctctgtggttaacattaaagattt 331 |||| ||||||| ||| ||||||||||||||||||||| Sbjct: 138713 tggaatctgaacctctatgtggttaacattaaagattt 138750
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 91.7 bits (46), Expect = 2e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 ||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || ||| Sbjct: 2248209 aaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggtttc 2248268 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 ||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| ||| Sbjct: 2248269 atggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaatgat 2248328 Query: 184 ctcaagggtggttactagagcgcttgtttc 213 ||||||||||||||||||| ||||||||| Sbjct: 2248329 ctcaagggtggttactagaatgcttgtttc 2248358 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 294 tggagtctgaacttctctgtggttaacattaaagattt 331 |||| ||||||| ||| ||||||||||||||||||||| Sbjct: 2248431 tggaatctgaacctctatgtggttaacattaaagattt 2248468
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 91.7 bits (46), Expect = 2e-15 Identities = 124/150 (82%) Strand = Plus / Minus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 ||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || ||| Sbjct: 77859 aaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggtttc 77800 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 ||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| ||| Sbjct: 77799 atggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaatgat 77740 Query: 184 ctcaagggtggttactagagcgcttgtttc 213 ||||||||||||||||||| ||||||||| Sbjct: 77739 ctcaagggtggttactagaatgcttgtttc 77710 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 294 tggagtctgaacttctctgtggttaacattaaagattt 331 |||| ||||||| ||| ||||||||||||||||||||| Sbjct: 77637 tggaatctgaacctctatgtggttaacattaaagattt 77600
>dbj|AK120267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047I10, full insert sequence Length = 2007 Score = 91.7 bits (46), Expect = 2e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 ||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || ||| Sbjct: 1499 aaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggtttc 1558 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 ||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| ||| Sbjct: 1559 atggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaatgat 1618 Query: 184 ctcaagggtggttactagagcgcttgtttc 213 ||||||||||||||||||| ||||||||| Sbjct: 1619 ctcaagggtggttactagaatgcttgtttc 1648 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 294 tggagtctgaacttctctgtggttaacattaaagattt 331 |||| ||||||| ||| ||||||||||||||||||||| Sbjct: 1721 tggaatctgaacctctatgtggttaacattaaagattt 1758
>gb|AY105020.1| Zea mays PCO098402 mRNA sequence Length = 784 Score = 87.7 bits (44), Expect = 4e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 |||||||| |||||||| |||||||| ||||||||||| | || ||||| || || ||| Sbjct: 457 aaggcccgcggtgaggtgatcagcaccaagaggcagcctgtgggacccaaacctggcttc 516 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 ||||| ||||| | || | ||||||||||| || || || || ||||| ||||||||| Sbjct: 517 atggttgagggtgctacactcgagacagtcactcctattccttatgatgtggtcaacgat 576 Query: 184 ctcaagggtggttactagag 203 |||||||| ||||||||||| Sbjct: 577 ctcaagggcggttactagag 596
>emb|CT987644.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 730 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 82 atcagcacaaagaggcagccagcagggcccaagcccgggttcatggtggagggcaccacc 141 |||||||| ||||| ||||| | ||| |||||||| || |||||||| |||||||| ||| Sbjct: 408 atcagcacgaagagacagccggaaggtcccaagcctggcttcatggtcgagggcacgacc 467 Query: 142 attgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggttact 199 || ||||| ||||| || || ||||| ||||||||||| || || ||||| ||||||| Sbjct: 468 atagagacggtcactcctattccgtatgatgtcgtcaatgacctgaagggcggttact 525
>emb|CT985375.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 752 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 82 atcagcacaaagaggcagccagcagggcccaagcccgggttcatggtggagggcaccacc 141 |||||||| ||||| ||||| | ||| |||||||| || |||||||| |||||||| ||| Sbjct: 433 atcagcacgaagagacagccggaaggtcccaagcctggcttcatggtcgagggcacgacc 492 Query: 142 attgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggttact 199 || ||||| ||||| || || ||||| ||||||||||| || || ||||| ||||||| Sbjct: 493 atagagacggtcactcctattccgtatgatgtcgtcaatgacctgaagggcggttact 550
>emb|CT985109.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 693 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 82 atcagcacaaagaggcagccagcagggcccaagcccgggttcatggtggagggcaccacc 141 |||||||| ||||| ||||| | ||| |||||||| || |||||||| |||||||| ||| Sbjct: 418 atcagcacgaagagacagccggaaggtcccaagcctggcttcatggtcgagggcacgacc 477 Query: 142 attgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggttact 199 || ||||| ||||| || || ||||| ||||||||||| || || ||||| ||||||| Sbjct: 478 atagagacggtcactcctattccgtatgatgtcgtcaatgacctgaagggcggttact 535
>gb|BT016206.1| Zea mays clone Contig39 mRNA sequence Length = 748 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 73 ggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtggag 132 |||||||| |||||||| ||||||||||| | || ||||| || || |||||||| ||| Sbjct: 430 ggtgaggtgatcagcaccaagaggcagcccgtgggacccaaacctggcttcatggttgag 489 Query: 133 ggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggt 192 || | || | ||||||||||| || || || || ||||| ||||||||||||||||| Sbjct: 490 ggtgctacactcgagacagtcactcctattccttatgatgtggtcaacgatctcaagggc 549 Query: 193 ggttactagag 203 ||||||||||| Sbjct: 550 ggttactagag 560
>emb|CT984806.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 689 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 82 atcagcacaaagaggcagccagcagggcccaagcccgggttcatggtggagggcaccacc 141 |||||||| ||||| ||||| | ||| |||||||| || |||||||| |||||||| ||| Sbjct: 433 atcagcacgaagagacagccggaaggtcccaagcctggcttcatggtcgagggcacgacc 492 Query: 142 attgagacagtcacacccatcccgtacgatgtcgtcaa 179 || ||||| ||||| || || ||||| ||||||||||| Sbjct: 493 atagagacggtcactcctattccgtatgatgtcgtcaa 530
>gb|DQ245638.1| Zea mays clone 18621 mRNA sequence Length = 680 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 82 atcagcacaaagaggcagccagcagggcccaagcccgggttcatggtggagggcaccacc 141 |||||||| ||||| ||||| ||| |||||||| || |||||||| ||||| | || Sbjct: 419 atcagcaccaagagacagcctaaaggtcccaagcctggtttcatggtcgagggtatgaca 478 Query: 142 attgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtgg 194 | ||||| ||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 479 ttggagactgtcactcccatcccttacgatgttgtcaacgatctcaagggtgg 531
>ref|NM_100841.2| Arabidopsis thaliana structural constituent of ribosome (AT1G09690) mRNA, complete cds Length = 755 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 407 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 466 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaaggg 191 || | ||| | ||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 467 aggaatgaccttggagactgtcactccaatcccgtacgatgtcgtcaacgatctcaaggg 526
>gb|AY081656.1| Arabidopsis thaliana similar to ribosomal protein L21 (At1g09690) mRNA, complete cds Length = 538 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 366 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 425 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaaggg 191 || | ||| | ||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 426 aggaatgaccttggagactgtcactccaatcccgtacgatgtcgtcaacgatctcaaggg 485
>gb|AY059923.1| Arabidopsis thaliana Similar to ribosomal protein L21 (At1g09690; F21M12.8) mRNA, complete cds Length = 665 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 407 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 466 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaaggg 191 || | ||| | ||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 467 aggaatgaccttggagactgtcactccaatcccgtacgatgtcgtcaacgatctcaaggg 526
>emb|BX814291.1|CNS0ADUZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 394 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 453 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaaggg 191 || | ||| | ||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 454 aggaatgaccttggagactgtcactccaatcccgtacgatgtcgtcaacgatctcaaggg 513
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Minus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 23422 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 23363 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaaggg 191 || | ||| | ||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 23362 aggaatgaccttggagactgtcactccaatcccgtacgatgtcgtcaacgatctcaaggg 23303
>dbj|AK227851.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-42-H06 Length = 659 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 477 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 529
>ref|NM_104579.3| Arabidopsis thaliana structural constituent of ribosome (AT1G57860) mRNA, complete cds Length = 669 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 477 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 529
>ref|NM_104563.3| Arabidopsis thaliana structural constituent of ribosome (AT1G57660) mRNA, complete cds Length = 715 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 486 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 538
>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence, complete sequence Length = 90448 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 46951 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 47003
>gb|AY091167.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g57660) mRNA, complete cds Length = 526 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 439 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 491
>gb|AY050840.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g57660) mRNA, complete cds Length = 681 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 486 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 538
>gb|AY086851.1| Arabidopsis thaliana clone 28545 mRNA, complete sequence Length = 627 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 483 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 535
>gb|AC079732.4|AC079732 Arabidopsis thaliana chromosome 1 BAC F12K22 genomic sequence, complete sequence Length = 43985 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 6271 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 6323
>gb|BT004794.1| Arabidopsis thaliana At1g57860 gene, complete cds Length = 495 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 439 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 491
>emb|BX814226.1|CNS0AC0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 674 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 445 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 497
>emb|BX841874.1|CNS09Y44 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 197 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 481 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 533
>gb|AC189331.1| Brassica rapa subsp. pekinensis clone KBrB037O12, complete sequence Length = 109500 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaaggg 191 ||||| ||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 68716 gagactgtcactcccatcccttacgacgtcgtcaacgatctcaaggg 68762 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 145 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaaggg 191 ||||| ||||| || ||||| |||||||||||||||||||||||||| Sbjct: 88529 gagactgtcactcctatcccatacgatgtcgtcaacgatctcaaggg 88483
>ref|NM_100831.2| Arabidopsis thaliana structural constituent of ribosome (AT1G09590) mRNA, complete cds Length = 675 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 380 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 439 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 188 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 440 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 496
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 89080 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 89139 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 188 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 89140 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 89196
>gb|BT000775.1| Arabidopsis thaliana clone RAFL04-10-C15 (R11681) putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 672 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 380 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 439 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 188 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 440 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 496
>gb|AY059119.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 526 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 366 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 425 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 188 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 426 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 482
>gb|AF370227.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 674 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 380 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 439 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 188 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 440 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 496
>emb|BX816463.1|CNS0AANS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 569 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 72 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 131 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 348 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 407 Query: 132 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 188 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 408 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 464
>gb|DQ245035.1| Zea mays clone 12389 mRNA sequence Length = 738 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 |||| |||||| ||||| |||||||| ||||||||||| | || ||||| || || ||| Sbjct: 468 aaggaccgtggcgaggtgatcagcaccaagaggcagcctgtgggacccaaacctggcttc 527 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 ||||| ||||| | || ||||||| || || || || || || ||||| || || ||| Sbjct: 528 atggttgagggtgctacacttgagaccgttactcctattccctatgatgtggtaaatgat 587 Query: 184 ctcaagggtggttactagag 203 |||||||| ||||||||||| Sbjct: 588 ctcaaggggggttactagag 607
>gb|AY310808.1| Nicotiana benthamiana clone 12-130 unknown mRNA Length = 388 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 73 ggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggt 128 |||||||||||||||||||||||||| || ||| ||||| || ||||||||||| Sbjct: 140 ggtgaggtcatcagcacaaagaggcaacctcaaggacccaaaccagggttcatggt 195
>emb|AJ718457.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC1-11-430, cultivar Bright Yellow 2 Length = 384 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 73 ggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggt 128 |||||||||||||||||||||||||| || ||| ||||| || ||||||||||| Sbjct: 91 ggtgaggtcatcagcacaaagaggcaacctcaaggacccaaaccagggttcatggt 146
>dbj|AP004496.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11C13, TM0029a, complete sequence Length = 53909 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 73 ggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggt 128 |||||||| |||||||| ||||||||||| || |||||||| || || |||||||| Sbjct: 15743 ggtgaggtgatcagcaccaagaggcagcctgctgggcccaaaccaggtttcatggt 15798
>gb|AY107603.1| Zea mays PCO098394 mRNA sequence Length = 965 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 64 aaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttc 123 |||| |||||| ||||| |||||||| ||||||||||| | || ||||| || || ||| Sbjct: 475 aaggaccgtggcgaggtgatcagcaccaagaggcagcctgtgggacccaaacctggcttc 534 Query: 124 atggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgat 183 ||||| ||||| | || ||||||| || || || || || || ||||| || || ||| Sbjct: 535 atggttgagggtgctacacttgagaccgttactcctattccctatgatgtggtaaatgat 594 Query: 184 ctcaagggtggttactagag 203 |||||||| ||||||||||| Sbjct: 595 ctcaaggggggttactagag 614
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17 Length = 109016 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 152 tcacacccatcccgtacgatgtcgtcaacgatctcaagggtg 193 |||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 13307 tcactcccatcccatacgatgtcgtcaacgacttcaagggtg 13266
>gb|AF457939.1| Zea mays clone cho1c.pk003.g2, mRNA sequence Length = 526 Score = 48.1 bits (24), Expect = 0.030 Identities = 71/84 (84%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 109 cccaagcccgggttcatggtggagggcaccacca-ttgagacagtcacacccatcccgta 167 ||||||||||| |||||||| ||||||| || || ||||||| || || ||||||| || Sbjct: 443 cccaagcccggcttcatggtcgagggcaacaacatttgagaccgtaac-tccatcccata 501 Query: 168 cgatgtcgtcaacgatctcaaggg 191 ||||| ||||| ||||||||||| Sbjct: 502 tgatgtggtcaatgatctcaaggg 525
>emb|Z49705.1|SC8520X S.cerevisiae chromosome XIII cosmid 8520 Length = 41200 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 atatatttacatttggtcgata 387 |||||||||||||||||||||| Sbjct: 4767 atatatttacatttggtcgata 4788
>emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chromosome 11 Contains a novel gene, the Pafah1b1 gene for platelet-activating factor acetylhydrolase isoform 1b beta1 subunit, the 5' end of a novel gene and two CpG islands, complete sequence Length = 137908 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 taggctgttttgtgaagctgca 428 |||||||||||||||||||||| Sbjct: 133384 taggctgttttgtgaagctgca 133405
>gb|AC102610.18| Mus musculus chromosome 19, clone RP23-411P21, complete sequence Length = 226019 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 ggagagagaaggcccgtggtg 76 ||||||||||||||||||||| Sbjct: 215384 ggagagagaaggcccgtggtg 215364
>gb|AC121784.2| Mus musculus BAC clone RP23-378G4 from 12, complete sequence Length = 163125 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tttatttcccttgttatttc 462 |||||||||||||||||||| Sbjct: 136965 tttatttcccttgttatttc 136946
>ref|XM_750518.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g12800) partial mRNA Length = 579 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acgatgtcgtcaacgatctc 186 |||||||||||||||||||| Sbjct: 491 acgatgtcgtcaacgatctc 510
>dbj|AK077315.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330411G14 product:unclassifiable, full insert sequence Length = 1907 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tttatttcccttgttatttc 462 |||||||||||||||||||| Sbjct: 1834 tttatttcccttgttatttc 1815
>dbj|BA000027.2| Oryzias latipes DNA, MHC Class I Region Length = 425935 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 atttatttcccttgttattt 461 |||||||||||||||||||| Sbjct: 28153 atttatttcccttgttattt 28134
>emb|Z83851.17|HS989H11 Human DNA sequence from clone CTA-989H11 on chromosome 22q13.1-13.2, complete sequence Length = 118831 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aggcagccagcagggcccaa 113 |||||||||||||||||||| Sbjct: 65341 aggcagccagcagggcccaa 65360
>emb|AL162726.16| Human DNA sequence from clone RP11-15B24 on chromosome 9 Contains a cytochrome c oxidase III (COIII) (MTCO3) pseudogene, a novel pseudogene and three novel genes, complete sequence Length = 195824 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 agggcaccaccattgagaca 150 |||||||||||||||||||| Sbjct: 66392 agggcaccaccattgagaca 66411
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 tgtggttaacattaaagatt 330 |||||||||||||||||||| Sbjct: 1135044 tgtggttaacattaaagatt 1135063
>emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chromosome 11 Contains the Psme4 gene for proteasome (prosome, macropain) activator subunit 4, the Gpr75 gene for G protein-coupled receptor 75, a novel pseudogene, a PDZ and LIM domain 1 (elfin) (Pdlim1) pseudogene, two novel genes, the 5' end of the Asb3 gene for ankyrin repeat and SOCS box-containing protein 3, a methyl-CpG binding domain protein 2 interacting protein (Mbdin) pseudogene and a CpG island, complete sequence Length = 244971 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tggttaacattaaagatttt 332 |||||||||||||||||||| Sbjct: 89665 tggttaacattaaagatttt 89684
>emb|AL732460.7| Mouse DNA sequence from clone RP23-113I19 on chromosome X, complete sequence Length = 198572 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 atttatttcccttgttatttctgt 465 ||||||| |||||||||||||||| Sbjct: 112100 atttattgcccttgttatttctgt 112123 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 90,550,356 Number of extensions: 4800860 Number of successful extensions: 89430 Number of sequences better than 10.0: 62 Number of HSP's gapped: 89413 Number of HSP's successfully gapped: 69 Length of query: 506 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 484 Effective length of database: 18,508,616,841 Effective search space: 8958170551044 Effective search space used: 8958170551044 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)